View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10046_low_16 (Length: 248)
Name: NF10046_low_16
Description: NF10046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10046_low_16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 29966288 - 29966056
Alignment:
| Q |
18 |
tatgcaatatgattat--gtgtagattggtacaccaagaaaccacatatccatgtgcaaattacacatttccatgcagttttcttcttcaagtaaaagaa |
115 |
Q |
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| T |
29966288 |
tatgcaatatgattatctgtgtagattggtacaccaagaaaccacatatccatgtgcaaattacacatttccatgcagttttcttcttcaagtaaaagaa |
29966189 |
T |
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| Q |
116 |
atattaatgattatatatgctgtgcgcctgcgtatgtggcacatatacatcgttgaatttaaaatttgtattaggcagatcaagtctacaaaatgtaata |
215 |
Q |
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| T |
29966188 |
atattaatgattatatatgctgtgcgcctgcatatgtggcacatatacatcgttgaatttaaaatttgtattaggcagatcaagtctacaaaatttaata |
29966089 |
T |
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| Q |
216 |
caattcaagagctatttgacattttaactcacc |
248 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
29966088 |
caattcaagagctatttgacattttaactcacc |
29966056 |
T |
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