View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10047_low_3 (Length: 447)

Name: NF10047_low_3
Description: NF10047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10047_low_3
NF10047_low_3
[»] chr4 (21 HSPs)
chr4 (190-417)||(46611273-46611494)
chr4 (190-418)||(54348931-54349152)
chr4 (197-417)||(5556144-5556357)
chr4 (190-417)||(39163327-39163547)
chr4 (190-370)||(35802288-35802462)
chr4 (190-370)||(53020160-53020334)
chr4 (199-274)||(24777680-24777755)
chr4 (33-96)||(53020002-53020065)
chr4 (35-96)||(5555981-5556042)
chr4 (26-96)||(54349247-54349317)
chr4 (26-99)||(35802123-35802196)
chr4 (26-99)||(39163162-39163235)
chr4 (26-99)||(46611586-46611659)
chr4 (190-326)||(4947064-4947191)
chr4 (26-92)||(24777840-24777906)
chr4 (371-417)||(55441797-55441843)
chr4 (1-94)||(4947286-4947379)
chr4 (377-417)||(35802456-35802496)
chr4 (380-417)||(53020331-53020368)
chr4 (249-305)||(55441715-55441765)
chr4 (370-418)||(24777576-24777624)
[»] chr7 (4 HSPs)
chr7 (190-417)||(4588797-4589017)
chr7 (190-341)||(218955-219099)
chr7 (26-99)||(218791-218864)
chr7 (26-96)||(4588632-4588702)
[»] chr1 (11 HSPs)
chr1 (197-418)||(30786004-30786219)
chr1 (197-417)||(46886581-46886794)
chr1 (197-417)||(46888602-46888815)
chr1 (197-417)||(43043658-43043862)
chr1 (33-92)||(43043519-43043578)
chr1 (26-99)||(30786318-30786391)
chr1 (371-417)||(36730115-36730161)
chr1 (370-415)||(20062478-20062523)
chr1 (51-94)||(20062766-20062809)
chr1 (249-277)||(20062577-20062605)
chr1 (249-277)||(36730033-36730061)
[»] chr2 (18 HSPs)
chr2 (190-370)||(10377590-10377764)
chr2 (190-370)||(10375328-10375502)
chr2 (197-369)||(24573708-24573873)
chr2 (190-370)||(27613654-27613828)
chr2 (197-334)||(19258731-19258862)
chr2 (10-99)||(36561898-36561987)
chr2 (190-274)||(22615899-22615983)
chr2 (33-96)||(19258964-19259027)
chr2 (10-94)||(22615711-22615795)
chr2 (370-417)||(22616032-22616079)
chr2 (29-99)||(10375163-10375233)
chr2 (26-99)||(24573972-24574045)
chr2 (50-99)||(10377449-10377498)
chr2 (377-418)||(19258687-19258728)
chr2 (54-99)||(27613920-27613965)
chr2 (249-305)||(36562153-36562203)
chr2 (197-244)||(36562086-36562133)
chr2 (377-417)||(10375496-10375536)
[»] scaffold0316 (2 HSPs)
scaffold0316 (190-370)||(10497-10670)
scaffold0316 (26-96)||(10765-10835)
[»] chr5 (9 HSPs)
chr5 (190-422)||(31813673-31813885)
chr5 (190-274)||(7014142-7014226)
chr5 (1-94)||(7014330-7014423)
chr5 (371-417)||(20507613-20507659)
chr5 (377-417)||(27595852-27595892)
chr5 (372-418)||(7014045-7014091)
chr5 (371-417)||(21947633-21947679)
chr5 (249-305)||(20507531-20507581)
chr5 (200-249)||(27597206-27597255)
[»] chr3 (13 HSPs)
chr3 (190-370)||(49020682-49020856)
chr3 (190-370)||(43543130-43543295)
chr3 (190-274)||(16467351-16467435)
chr3 (10-94)||(16467539-16467623)
chr3 (26-99)||(49020948-49021021)
chr3 (370-417)||(16467255-16467302)
chr3 (190-249)||(25482960-25483019)
chr3 (371-417)||(39944223-39944269)
chr3 (197-245)||(39944370-39944418)
chr3 (28-94)||(25483123-25483190)
chr3 (65-99)||(43543385-43543419)
chr3 (388-417)||(43543096-43543125)
chr3 (388-417)||(49020648-49020677)
[»] chr8 (9 HSPs)
chr8 (190-337)||(12231632-12231772)
chr8 (190-337)||(31518783-31518923)
chr8 (190-274)||(24801902-24801986)
chr8 (26-93)||(12231467-12231534)
chr8 (1-94)||(24801705-24801798)
chr8 (26-81)||(31518622-31518677)
chr8 (197-248)||(33328100-33328151)
chr8 (370-417)||(33328777-33328824)
chr8 (370-414)||(24802043-24802087)
[»] chr6 (1 HSPs)
chr6 (197-249)||(241443-241495)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-92)||(198643-198709)


Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 190 - 417
Target Start/End: Complemental strand, 46611494 - 46611273
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||    
T  46611494 atcatgttgtcacgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaac 46611401  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 389  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46611400 cgcgagacttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 46611301  T
Q  390 tttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||    
T  46611300 tttacattaccaaaaatcggtgtaaaca 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 190 - 418
Target Start/End: Complemental strand, 54349152 - 54348931
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||      |||||||||    
T  54349152 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcaggaagtgat------gtcataaac 54349059  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 389  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||| ||    
T  54349058 cgcgaggcttgaacgatcccc-tttaaaaatacatttgtcaccatcgatcgacatttatgtcctgaaatcattgatggataccattgatgaataatgaag 54348960  T
Q  390 tttacattaccaaaaatcggtgtaaacag 418  Q
    |||||||||||||||||||||||||||||    
T  54348959 tttacattaccaaaaatcggtgtaaacag 54348931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 197 - 417
Target Start/End: Original strand, 5556144 - 5556357
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||      ||||||| || |||||    
T  5556144 tgtcatgagacaacttgttattacaagatgttggaagcgattctaacattaatgttcttaaagaatccatgaagtgat------gtcataatccacgagg 5556237  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggagtttacat 396  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5556238 cttgaacgatcccc-tttaaaaatacatttgtcatcatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatgaagtttacat 5556336  T
Q  397 taccaaaaatcggtgtaaaca 417  Q
    |||||||||||||||||||||    
T  5556337 taccaaaaatcggtgtaaaca 5556357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 190 - 417
Target Start/End: Original strand, 39163327 - 39163547
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| |||||||||||||||| || |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||    
T  39163327 atcatgttgtcatgagacaacttttttttactagattttggaagcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaac 39163420  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 389  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  39163421 cgcgagacttgaacgatccccctt-aaaaatacatttgtcaccatcgatcgacatttatgtcctaaaattattgatggataccattaatggattatggag 39163519  T
Q  390 tttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||    
T  39163520 tttacattaccaaaaatcggtgtaaaca 39163547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 190 - 370
Target Start/End: Original strand, 35802288 - 35802462
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||      |||||||||    
T  35802288 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaataatgtttgaagtgat------gtcataaac 35802381  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35802382 cgcgaggcttgaacgatccccctttaaacatacatttgtcaccatcgattgacatttatgtcctaaaaccattgatggata 35802462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 190 - 370
Target Start/End: Original strand, 53020160 - 53020334
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||      |||||||||    
T  53020160 atcatgttgtcatgagacaacttgttattacaagatgttggaagaaattatgacattaatgttcttaaagaatgcatgaagtgat------gtcataaac 53020253  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53020254 cgcgaggcttgaacaatccccttttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatagata 53020334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 24777755 - 24777680
Alignment:
Q  199 tcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgat 274  Q
    ||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  24777755 tcatgagacaacttgttattaaaagacgttggatgcaattctgacattaatgttcttaaagaatgcatgaagtgat 24777680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 53020002 - 53020065
Alignment:
Q  33 gggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  53020002 gggtttatgagtgtatggattgacagattccaaccaccctttacattcctgcaatttaatatca 53020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 5555981 - 5556042
Alignment:
Q  35 gttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5555981 gttcacgagtgtatggattgacagattccaaccaccctttacattcctgcaatttaatatca 5556042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 54349317 - 54349247
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    |||||||||||||| ||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  54349317 agcaaacgggttcaggagtggagagattgacagattccgaccaccctttacattcctacaatttaatatca 54349247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 35802123 - 35802196
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    ||||||||||| || ||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35802123 agcaaacgggtccaggagtggagagattgacagattccgaccaccctttacattcctacaatttaatatcattg 35802196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 39163162 - 39163235
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    ||||||||||| || ||||| |  |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  39163162 agcaaacgggtccaggagtggagagattgatagattccgaccaccctttacattcctacaatttaatatcattg 39163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 46611659 - 46611586
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||||||||||| | ||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  46611659 agcaaacgggtttaggagtggagagattgacagattccgaccaccctttatattcctacaatttaatatcattg 46611586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 326
Target Start/End: Complemental strand, 4947191 - 4947064
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||  ||||| |||| |||||| ||| || |||| ||||||||||||||||| |||||||||      |||||||||  |    
T  4947191 atcatgttgtcatgagacaactt--tattaaaagacgttggatgcaattatgactttaatgttcttaaagaaagcatgaagt------gatgtcataggc 4947100  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacattt 326  Q
    |||||| |||||||||| |  ||||||||||||||||    
T  4947099 cgcgagacttgaacgat-catctttaaaaatacattt 4947064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 24777906 - 24777840
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaat 92  Q
    |||||| || |||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  24777906 agcaaatggcttcacgagtgcatggattgatagattccaaccaccctttacattcctgcaatttaat 24777840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 55441797 - 55441843
Alignment:
Q  371 ccattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  55441797 ccattgatggataatgaagtttacattaccaaaaatcggtgtaaaca 55441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4947379 - 4947286
Alignment:
Q  1 tgaaactacaacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    |||||||  ||||||| | ||||| |||| | ||||||| ||||| || ||| ||||||||||||||||| ||||||||| | |||||||||||    
T  4947379 tgaaactctaacaccccctccgcggagcatatgggttcacgagtggatagatcgacagattccaaccaccttttacattcatgcaatttaatat 4947286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 35802456 - 35802496
Alignment:
Q  377 atggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  35802456 atggataatgaagtttacattaccaaaaatcggtgtaaaca 35802496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 53020331 - 53020368
Alignment:
Q  380 gataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  53020331 gataatgaagtttacattacgaaaaatcggtgtaaaca 53020368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 55441715 - 55441765
Alignment:
Q  249 tgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgaggcttgaacga 305  Q
    |||||||||||||||||||||||||||      |||||||||||||| |||||||||    
T  55441715 tgttcttaaagaatgcatgaagtgata------tcataaaccgcgagacttgaacga 55441765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 24777624 - 24777576
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaaacag 418  Q
    |||||| ||| ||| ||||||||||||||| |||||| |||||||||||    
T  24777624 accattgatgaatagtggagtttacattactaaaaattggtgtaaacag 24777576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 7e-93; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 190 - 417
Target Start/End: Original strand, 4588797 - 4589017
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||    
T  4588797 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaac 4588890  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 389  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||    
T  4588891 cgcgaggcttgaacgatcccc-tttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattgatggataataaag 4588989  T
Q  390 tttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||| ||||||||||||||||||    
T  4588990 tttacattatcaaaaatcggtgtaaaca 4589017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 218955 - 219099
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||      |||||||||||     
T  218955 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgtttttaaagaatgcatgaagt------gatgtcataaat 219048  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcga 341  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  219049 cgcgaggcttgaacgat-cccctttaaaaatacatttgtccccatcgatcga 219099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 218791 - 218864
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||||||||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  218791 agcaaacgggttcaggagtggagagattgacagattccgaccaccctttacattcctacaatttaatatcattg 218864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 4588632 - 4588702
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    ||||||||||| |  ||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  4588632 agcaaacgggtcctggagtggagagattgacagattccaaccaccttttacattcctacaatttaatatca 4588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 1e-91; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 197 - 418
Target Start/End: Complemental strand, 30786219 - 30786004
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||      |||||||||||||||     
T  30786219 tgtcatgagacaatttgttattacaagatgttggaagccattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaaccgcgaga 30786126  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggagtttacat 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  30786125 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaacctttgatggatactattgatggataatggagtttacat 30786026  T
Q  397 taccaaaaatcggtgtaaacag 418  Q
    ||||||||||||||||||||||    
T  30786025 taccaaaaatcggtgtaaacag 30786004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 197 - 417
Target Start/End: Complemental strand, 46886794 - 46886581
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||      |||||||||||||||     
T  46886794 tgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaacgttcttaaagaatgcatgaagtgat------gtcataaaccgcgaga 46886701  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggagtttacat 396  Q
    |||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46886700 cttgaacgattccc-tttaaaaatatttttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccatgaatggataatggagtttacat 46886602  T
Q  397 taccaaaaatcggtgtaaaca 417  Q
    |||||||||  ||||||||||    
T  46886601 taccaaaaaatggtgtaaaca 46886581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 197 - 417
Target Start/End: Complemental strand, 46888815 - 46888602
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||||||||     
T  46888815 tgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaaccgcgaga 46888722  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggagtttacat 396  Q
    |||||||||| ||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  46888721 cttgaacgattccc-tttaaaaatatttttgtcaccatcgatcgacatttatgtgctaaaaccattgatggataccatgaatggataatggagtttacat 46888623  T
Q  397 taccaaaaatcggtgtaaaca 417  Q
    | |||||||  ||||||||||    
T  46888622 ttccaaaaaatggtgtaaaca 46888602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 197 - 417
Target Start/End: Original strand, 43043658 - 43043862
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||  |||||||||| ||                |||    
T  43043658 tgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttatatcataaatgaagtgatgtc----------------agg 43043741  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatc-gatcgacatttatgtcctaaaaccattgatggataccattaatggataatggagtttaca 395  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  43043742 cttgaacgatcctcctt-aaaaatacatttgtcaccatcagatcgacatttatgtcctaaaaccattgacggataccattaatagataatggagtttaca 43043840  T
Q  396 ttaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||    
T  43043841 ttaccaaaaatcggtgtaaaca 43043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 43043519 - 43043578
Alignment:
Q  33 gggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaat 92  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  43043519 gggttcatgagtgtatggattggcagattccaaccaccctttacattcctgcaatttaat 43043578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 30786391 - 30786318
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||||||||||||| ||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30786391 agcaaacgggttcaagagtggagagattgacagattccgaccaccctttaaattcctacaatttaatatcattg 30786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 36730115 - 36730161
Alignment:
Q  371 ccattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  36730115 ccattaatgaataatgaagtttacattaccaaaaatcgatgtaaaca 36730161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 20062523 - 20062478
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaaa 415  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||    
T  20062523 accattgatggataatgaagtttacgttaccaaaaatcggtgtaaa 20062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 20062809 - 20062766
Alignment:
Q  51 attgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  20062809 attgacagatttcaaccaccatttacattcctgcaatttaatat 20062766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 20062605 - 20062577
Alignment:
Q  249 tgttcttaaagaatgcatgaagtgatatc 277  Q
    |||||||||||||||||||||||||||||    
T  20062605 tgttcttaaagaatgcatgaagtgatatc 20062577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 36730033 - 36730061
Alignment:
Q  249 tgttcttaaagaatgcatgaagtgatatc 277  Q
    |||||||||||||||||||||||||||||    
T  36730033 tgttcttaaagaatgcatgaagtgatatc 36730061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 6e-72; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 190 - 370
Target Start/End: Original strand, 10377590 - 10377764
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||      |||||||||    
T  10377590 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaaaaatgtatgaagtgat------gtcataaac 10377683  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10377684 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatatcctaaaaccattgatggata 10377764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 190 - 370
Target Start/End: Original strand, 10375328 - 10375502
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||      |||||||||    
T  10375328 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgtatgaagtgat------gtcataaac 10375421  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10375422 cgcgagacttgaacgatcccccattaaaaatacatttgtcaccatcgattgacatttatgtcctaaaaccattgatggata 10375502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 197 - 369
Target Start/End: Complemental strand, 24573873 - 24573708
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||      |||||||||| |||||    
T  24573873 tgtcatgagacaacttgttattacaagatgttggaggcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaaccacgagg 24573780  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggat 369  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24573779 cttgaacgatcccc-tttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggat 24573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 27613828 - 27613654
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||      |||||||||    
T  27613828 atcatgttgtcatgagacaatttgttattacaagatgttggaagccattctgagattaatgttcttaaagaatgcatgaagtgat------gtcataaac 27613735  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27613734 tgcgaggcttgaacgatccccctttaaaaatacattagtcaccatcgatcgacatttatgtcctaaaaccattgatggata 27613654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 19258862 - 19258731
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgagg 296  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||      ||||||||||||||||||     
T  19258862 tgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgaatgaagt------gatgtcataaaccgcgaga 19258769  T
Q  297 cttgaacgatccccctttaaaaatacatttgtcaccat 334  Q
    |||||||||||||||||||||||||||||||| |||||    
T  19258768 cttgaacgatccccctttaaaaatacatttgtgaccat 19258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 36561898 - 36561987
Alignment:
Q  10 aacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    ||||||| || |||| |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36561898 aacacccccgtcgcggagcaaatgagttcacgagtgtatggattgacagattccaaccaccctttacattcctccaatttaatataattg 36561987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 22615899 - 22615983
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgat 274  Q
    |||||| |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||| |||||||||| |||||||    
T  22615899 atcatgttgtcatgagacaacttgttattaatagatgttggatgcaattctgacattaatgttcttcaagaatgcatcaagtgat 22615983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 19259027 - 19258964
Alignment:
Q  33 gggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19259027 gggttcatgagtgtatggattggcagattccaaccaccctttacattcctgcaatttaatatca 19258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 22615711 - 22615795
Alignment:
Q  10 aacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    ||||||| ||||||| |||||| || |||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||    
T  22615711 aacacccccgccgcggagcaaatggattcatgagtgtatggattgatagatttcaaccaccctttacattactgcaatttaatat 22615795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 22616032 - 22616079
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22616032 accattaatggataatggagtttacattaccaaaaatcggtgtaaaca 22616079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 10375163 - 10375233
Alignment:
Q  29 aaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    ||||||||||| || || |  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10375163 aaacgggttcaggaatggagagattgacatattccaaccaccctttacattcctacaatttaatatcattg 10375233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 24574045 - 24573972
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||||| ||||||| ||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  24574045 agcaaatgggttcaggagtgcagagattgacaaattccgaccaccctttacattcctacaatttaatatcattg 24573972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 10377449 - 10377498
Alignment:
Q  50 gattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  10377449 gattgacatattccgaccaccctttacattcctacaatttaatatcattg 10377498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 19258728 - 19258687
Alignment:
Q  377 atggataatggagtttacattaccaaaaatcggtgtaaacag 418  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  19258728 atggataatgaagtttacattaccaaaaatcggtgtaaacag 19258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 27613965 - 27613920
Alignment:
Q  54 gacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  27613965 gacaaattccgaccaccctttacattcctacaatttaatatcattg 27613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 36562153 - 36562203
Alignment:
Q  249 tgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgaggcttgaacga 305  Q
    |||||||||||||||||||||||||||      ||||||||||||||||||||||||    
T  36562153 tgttcttaaagaatgcatgaagtgata------tcataaaccgcgaggcttgaacga 36562203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 36562086 - 36562133
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgaca 244  Q
    ||||||||||||| ||||||||| ||||||||||| ||| ||||||||    
T  36562086 tgtcatgagacaatttgttattaaaagatgttggatgcaattctgaca 36562133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 10375496 - 10375536
Alignment:
Q  377 atggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  10375496 atggataatgaagtttacattaccaaaaaatggtgtaaaca 10375536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 10670 - 10497
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      |||||||||    
T  10670 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcatgaagtgat------gtcataaac 10577  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10576 cgcggggcttgaacgatcccc-tttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaatcattgatggata 10497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 10835 - 10765
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatca 96  Q
    ||||||| |||||| ||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10835 agcaaacaggttcaagagtggagagattgacagattccgaccaccctttacattcctacaatttaatatca 10765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 190 - 422
Target Start/End: Original strand, 31813673 - 31813885
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| |||||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||      |||||||||    
T  31813673 atcatgttgtcatgagacaactttttattacgagatgttggaagaaattctgacattaatgttcttaaagaattcatgaagtgat------gtcataaac 31813766  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggataccattaatggataatggag 389  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||             |||||||||| ||    
T  31813767 cgcgatgcttgaacgatcccc-tttaaaaatacatttgtcatcatcgatcgacatttatgtcctaaaaccattg-------------atggataatgaag 31813852  T
Q  390 tttacattaccaaaaatcggtgtaaacagacag 422  Q
    |||||||||||||||||||||||||||||||||    
T  31813853 tttacattaccaaaaatcggtgtaaacagacag 31813885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 7014226 - 7014142
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgat 274  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||| ||||||||||    
T  7014226 atcatgttgtcatgagacaacttgttattaaaagatgttggatgcaattttgacattaatgttcttaaagaatgtatgaagtgat 7014142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7014423 - 7014330
Alignment:
Q  1 tgaaactacaacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    |||||||  ||||||| ||||||| |||| | ||||||| ||||| ||  ||||| ||||| |||||||||||||||||||| |||||||||||    
T  7014423 tgaaactctaacacccccgccgcgtagcatatgggttcacgagtggataaattgatagatttcaaccaccctttacattcctgcaatttaatat 7014330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 20507613 - 20507659
Alignment:
Q  371 ccattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  20507613 ccattgatggataatgaagtttacattaccaaaaatcggtgtaaaca 20507659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 27595852 - 27595892
Alignment:
Q  377 atggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  27595852 atggataatgaagtttacattaccaaaaatcggtgtaaaca 27595892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 7014091 - 7014045
Alignment:
Q  372 cattaatggataatggagtttacattaccaaaaatcggtgtaaacag 418  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||    
T  7014091 cattgatggataatgtagtttacattaccaaaaatcgatgtaaacag 7014045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 21947633 - 21947679
Alignment:
Q  371 ccattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||    
T  21947633 ccattgatggataatgaagtttacattaccaaaaatcagtgtaaaca 21947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 20507531 - 20507581
Alignment:
Q  249 tgttcttaaagaatgcatgaagtgatatcgatgtcataaaccgcgaggcttgaacga 305  Q
    |||||||||||||||||||||||||||      |||||||||||||| |||||||||    
T  20507531 tgttcttaaagaatgcatgaagtgata------tcataaaccgcgagacttgaacga 20507581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 27597206 - 27597255
Alignment:
Q  200 catgagacaacttgttattacaagatgttggaagcagttctgacattaat 249  Q
    |||||||||||||||||||| ||| ||||||| ||| |||| ||||||||    
T  27597206 catgagacaacttgttattaaaagttgttggatgcaattctaacattaat 27597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 49020856 - 49020682
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||| |||||||||||||||||||||||   |||| ||||||||||| |||||||||||||||||||||      |||||||||    
T  49020856 atcatgttgtcatgagacaatttgttattacaagatgttggaagtcattctcacattaatgtttttaaagaatgcatgaagtgat------gtcataaac 49020763  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  49020762 cgcgaggtttgaacgatccccctttaaaaatacatttgtcataatcgatcgacatttatgtcctaaaaccattgatggata 49020682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 43543295 - 43543130
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||  || |||||||||||||         |||||||||||||      |||||||||    
T  43543295 atcatgttgtcatgagacaatttgttattacaagatgttggaagccattttgacattaatgtt---------tgcatgaagtgat------gtcataaac 43543211  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43543210 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcgatcgacatttatgtcctaaaaccattgatggata 43543130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 16467435 - 16467351
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgat 274  Q
    |||||| |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||| |||||||||| |||||||    
T  16467435 atcatgttgtcatgagacaacttgttattaatagatgttggatgcaattctgacattaatgttcttcaagaatgcatcaagtgat 16467351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 16467623 - 16467539
Alignment:
Q  10 aacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    ||||||| ||||||| |||||| || |||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||    
T  16467623 aacacccccgccgcggagcaaatggattcatgagtgtatggattgatagatttcaaccaccctttacattactgcaatttaatat 16467539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 49021021 - 49020948
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatatcattg 99  Q
    ||||| |||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49021021 agcaagcgggttcaagagtggagagattgacagattccgaccaccctttacattcctacaatttaatatcattg 49020948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 16467302 - 16467255
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16467302 accattaatggataatggagtttacattaccaaaaatcggtgtaaaca 16467255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 25483019 - 25482960
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaat 249  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||    
T  25483019 atcatgttgtcatgagacaacttgttattaaaagatgttggatgcaattctaacattaat 25482960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 39944269 - 39944223
Alignment:
Q  371 ccattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  39944269 ccattgatggataatgaagtttacattaccaaaattcggtgtaaaca 39944223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 39944418 - 39944370
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacat 245  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||    
T  39944418 tgtcatgagacaacttgttattaaaagatgttggatgcaattctaacat 39944370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 25483190 - 25483123
Alignment:
Q  28 caaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcc-tacaatttaatat 94  Q
    |||||||||||| ||||| || | |||||| |||||||||||| |||||||||| | |||||||||||    
T  25483190 caaacgggttcaggagtggataggttgacatattccaaccaccatttacattccatgcaatttaatat 25483123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 43543419 - 43543385
Alignment:
Q  65 accaccctttacattcctacaatttaatatcattg 99  Q
    |||||||||||||||||||| ||||||||||||||    
T  43543419 accaccctttacattcctacgatttaatatcattg 43543385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 417
Target Start/End: Complemental strand, 43543125 - 43543096
Alignment:
Q  388 agtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||||    
T  43543125 agtttacattaccaaaaatcggtgtaaaca 43543096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 417
Target Start/End: Complemental strand, 49020677 - 49020648
Alignment:
Q  388 agtttacattaccaaaaatcggtgtaaaca 417  Q
    ||||||||||||||||||||||||||||||    
T  49020677 agtttacattaccaaaaatcggtgtaaaca 49020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 190 - 337
Target Start/End: Original strand, 12231632 - 12231772
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||      |||||| |||||    
T  12231632 atcatgttgtcatgagacaacttgttattacaagatgttggaagcaattctgacattaatgttcttaaagaatgcatgaagt------gatgtcttaaac 12231725  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcga 337  Q
    ||||| ||||||||||| ||||||||||||||||||||| | ||||||    
T  12231726 cgcgaagcttgaacgat-cccctttaaaaatacatttgttatcatcga 12231772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 337
Target Start/End: Original strand, 31518783 - 31518923
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgatatcgatgtcataaac 289  Q
    |||||| |||||||||||||||| |||||| ||||||||||| ||| |||| |||||||||||||||||  ||||||||| |       |||||||||||    
T  31518783 atcatgttgtcatgagacaacttattattaaaagatgttggatgcaattctaacattaatgttcttaaaagatgcatgaaat------tatgtcataaac 31518876  T
Q  290 cgcgaggcttgaacgatccccctttaaaaatacatttgtcaccatcga 337  Q
    || ||| |||||||||| ||||||||||||||||||||| | ||||||    
T  31518877 cgtgagacttgaacgat-cccctttaaaaatacatttgttatcatcga 31518923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 24801902 - 24801986
Alignment:
Q  190 atcatgctgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaatgttcttaaagaatgcatgaagtgat 274  Q
    |||||| |||||| |||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||| |||||||||||    
T  24801902 atcatgttgtcattagacaacttgttattaaaagatgttggatgcaattctgacattgatgttcttaaagaatccatgaagtgat 24801986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 12231467 - 12231534
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaata 93  Q
    |||||||||||||| ||||| |  |||||||||||||| ||||||||||||||||||| |||||||||    
T  12231467 agcaaacgggttcaggagtggagagattgacagattccgaccaccctttacattcctataatttaata 12231534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24801705 - 24801798
Alignment:
Q  1 tgaaactacaacacccacgccgcgaagcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaatat 94  Q
    |||||||  ||||||| ||| |||||||| |  |||||| ||||| || ||| |||||||||||||||||||||||||||||  ||||||||||    
T  24801705 tgaaactctaacacccccgctgcgaagcatataggttcacgagtggatagatcgacagattccaaccaccctttacattcctgaaatttaatat 24801798  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 31518622 - 31518677
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcc 81  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||| |||||    
T  31518622 agcaaacgggttcaggagtggatagattgacagattccaaccaacctttaaattcc 31518677  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 33328100 - 33328151
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaa 248  Q
    |||||||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  33328100 tgtcatgagaaaacttgttattaaaagatgttggatgcaattctgacattaa 33328151  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 33328777 - 33328824
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaaaca 417  Q
    |||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  33328777 accattgatggataatgaagtttacattaccaaaaatcgatgtaaaca 33328824  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 24802043 - 24802087
Alignment:
Q  370 accattaatggataatggagtttacattaccaaaaatcggtgtaa 414  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||    
T  24802043 accattgatggataatgaagtttacgttaccaaaaattggtgtaa 24802087  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 241443 - 241495
Alignment:
Q  197 tgtcatgagacaacttgttattacaagatgttggaagcagttctgacattaat 249  Q
    ||||||||||||||||||||||| ||||||||||  ||| |||| ||||||||    
T  241443 tgtcatgagacaacttgttattaaaagatgttgggtgcaattctaacattaat 241495  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 198643 - 198709
Alignment:
Q  26 agcaaacgggttcatgagtgtatggattgacagattccaaccaccctttacattcctacaatttaat 92  Q
    |||||||||||||| ||||| || ||||||||||||||| ||||| |||   ||||| |||||||||    
T  198643 agcaaacgggttcaggagtggatagattgacagattccagccaccattttatttccttcaatttaat 198709  T

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