View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_173 (Length: 279)
Name: NF10049A_low_173
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_173 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 10 - 260
Target Start/End: Original strand, 45539766 - 45540016
Alignment:
| Q |
10 |
aacaatattataaagggcatgaaaaaattggaagcttgtgtgaatttgtttatagttattgacatatatatttgagtgtgtttgtatgcaagtttagtat |
109 |
Q |
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| T |
45539766 |
aacaatgttataaagggcatgaaagaattggaagcttgtgtgaatttgtttatagttattgacatatatatttgagtgtgtttgtatgcaagtttagtat |
45539865 |
T |
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| Q |
110 |
ttttcttgtcgtgatggagtttcgcacctcttttccttgattacctttttattgtttatcttatttggttatgtaaagttagtgtatgctctctaaatta |
209 |
Q |
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| T |
45539866 |
ttttcttgtcgtgatggagtttcgcacctcttttccttgattacctttttattgtttatcttatatggttatgtaaagttagtgtatgctatctaaatta |
45539965 |
T |
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| Q |
210 |
caagtcatttgaaatttttatttttcatctttacttgaatcagagtataat |
260 |
Q |
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| T |
45539966 |
caagtcatttgaaatttttatttttcatctctacttgaatcagagtataat |
45540016 |
T |
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