View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_176 (Length: 276)
Name: NF10049A_low_176
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_176 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 32528227 - 32528489
Alignment:
| Q |
8 |
tgaaatgaaacaaacaaccgaagatgacactttctagtactaccaaaactgtctcttagctacttttagtactnnnnnnnntgatttagagagagaaatg |
107 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32528227 |
tgaaatgaaacaaacaacctaagatgacactttctagtactaccaaaactgtctcttagctacttttagtactaaaaaaaatgatttagagagagaaatg |
32528326 |
T |
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| Q |
108 |
tgatctacacaaaagacttgaactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528327 |
tgatctacacaaaagacttgaactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagc |
32528426 |
T |
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| Q |
208 |
gagaactttggcgaaaaatgagtgaatattactctcattcatagttactttagatttgcttgc |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528427 |
gagaactttggcgaaaaatgagtgaatattactctcattcatagttactttagatttgcttgc |
32528489 |
T |
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