View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10049A_low_225 (Length: 252)

Name: NF10049A_low_225
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10049A_low_225
NF10049A_low_225
[»] chr8 (51 HSPs)
chr8 (20-223)||(22504279-22504482)
chr8 (172-213)||(37141378-37141419)
chr8 (171-223)||(41324134-41324186)
chr8 (172-210)||(8717477-8717515)
chr8 (174-212)||(14279571-14279609)
chr8 (172-213)||(6109190-6109231)
chr8 (173-210)||(24838172-24838209)
chr8 (173-210)||(26799206-26799243)
chr8 (175-212)||(30694439-30694476)
chr8 (173-209)||(12714373-12714409)
chr8 (166-210)||(20665365-20665409)
chr8 (166-210)||(30550728-30550772)
chr8 (177-213)||(39138997-39139033)
chr8 (166-210)||(44215477-44215521)
chr8 (175-210)||(13124365-13124400)
chr8 (175-210)||(24023417-24023452)
chr8 (171-210)||(32051534-32051573)
chr8 (174-213)||(33996092-33996131)
chr8 (172-206)||(4830029-4830063)
chr8 (173-211)||(5179815-5179853)
chr8 (172-210)||(8137956-8137994)
chr8 (177-223)||(8544588-8544634)
chr8 (172-210)||(12748922-12748960)
chr8 (173-215)||(20275186-20275228)
chr8 (173-215)||(21061813-21061855)
chr8 (172-210)||(23159462-23159500)
chr8 (172-206)||(24429820-24429854)
chr8 (175-213)||(26196603-26196641)
chr8 (172-210)||(32115408-32115446)
chr8 (172-206)||(32192915-32192949)
chr8 (173-211)||(33743597-33743635)
chr8 (172-210)||(34420864-34420902)
chr8 (173-215)||(40400003-40400045)
chr8 (172-210)||(45049596-45049634)
chr8 (166-210)||(3672618-3672663)
chr8 (173-210)||(7869643-7869680)
chr8 (173-210)||(8461838-8461875)
chr8 (172-213)||(27718893-27718934)
chr8 (177-210)||(41860453-41860486)
chr8 (174-210)||(4077712-4077748)
chr8 (174-206)||(7679925-7679957)
chr8 (173-213)||(17641859-17641899)
chr8 (177-217)||(25277211-25277251)
chr8 (182-210)||(26932867-26932895)
chr8 (177-209)||(28580970-28581002)
chr8 (175-215)||(29924914-29924954)
chr8 (166-210)||(30429239-30429283)
chr8 (175-211)||(32285760-32285796)
chr8 (175-215)||(33105415-33105455)
chr8 (174-206)||(39076543-39076575)
chr8 (174-206)||(39077029-39077061)
[»] chr7 (50 HSPs)
chr7 (173-223)||(48103663-48103713)
chr7 (174-222)||(5963817-5963865)
chr7 (171-210)||(6023329-6023368)
chr7 (172-210)||(4905297-4905335)
chr7 (172-210)||(19416535-19416573)
chr7 (173-222)||(44406846-44406895)
chr7 (171-223)||(19626514-19626566)
chr7 (166-210)||(20763169-20763213)
chr7 (166-210)||(29488735-29488779)
chr7 (166-210)||(33232399-33232443)
chr7 (166-210)||(34284541-34284585)
chr7 (171-223)||(46737805-46737857)
chr7 (172-208)||(47342698-47342734)
chr7 (171-210)||(10026014-10026053)
chr7 (172-215)||(14623482-14623525)
chr7 (173-212)||(35224140-35224179)
chr7 (166-213)||(36755029-36755076)
chr7 (166-213)||(36760826-36760873)
chr7 (171-210)||(40808161-40808200)
chr7 (175-210)||(47677579-47677614)
chr7 (175-209)||(1079695-1079729)
chr7 (172-210)||(6781828-6781866)
chr7 (172-206)||(7908614-7908648)
chr7 (172-206)||(8084448-8084482)
chr7 (172-210)||(10244748-10244786)
chr7 (172-210)||(18773758-18773796)
chr7 (172-210)||(19599166-19599204)
chr7 (172-210)||(27462438-27462476)
chr7 (173-215)||(42753524-42753566)
chr7 (171-213)||(47342433-47342475)
chr7 (173-210)||(18714470-18714507)
chr7 (174-219)||(19578130-19578175)
chr7 (172-205)||(30397090-30397123)
chr7 (178-223)||(36121679-36121724)
chr7 (175-212)||(39280818-39280855)
chr7 (173-210)||(39926540-39926577)
chr7 (166-213)||(3536253-3536301)
chr7 (173-213)||(18023701-18023741)
chr7 (166-210)||(19036104-19036148)
chr7 (174-210)||(20085761-20085797)
chr7 (166-210)||(20718488-20718532)
chr7 (174-214)||(23221415-23221455)
chr7 (175-219)||(24027053-24027096)
chr7 (174-214)||(24483896-24483936)
chr7 (177-209)||(39106666-39106698)
chr7 (173-213)||(42227804-42227844)
chr7 (173-213)||(42829233-42829273)
chr7 (178-210)||(43139292-43139324)
chr7 (175-215)||(44595635-44595675)
chr7 (174-206)||(45425476-45425508)
[»] chr6 (27 HSPs)
chr6 (166-210)||(2681696-2681740)
chr6 (173-222)||(26356071-26356120)
chr6 (166-210)||(33976259-33976303)
chr6 (166-209)||(31895303-31895346)
chr6 (172-210)||(8629698-8629736)
chr6 (174-212)||(19265524-19265562)
chr6 (173-211)||(30579881-30579919)
chr6 (173-210)||(12735245-12735282)
chr6 (172-205)||(24269904-24269937)
chr6 (172-213)||(32053809-32053850)
chr6 (166-210)||(247674-247718)
chr6 (164-223)||(8393741-8393800)
chr6 (166-213)||(10018414-10018461)
chr6 (172-219)||(26320557-26320603)
chr6 (172-210)||(8569730-8569768)
chr6 (172-210)||(24623319-24623357)
chr6 (173-210)||(788888-788925)
chr6 (175-212)||(12904317-12904354)
chr6 (173-210)||(33824903-33824940)
chr6 (166-209)||(5937646-5937690)
chr6 (166-210)||(12582231-12582275)
chr6 (177-209)||(21029369-21029401)
chr6 (175-215)||(23635711-23635751)
chr6 (174-210)||(23903309-23903345)
chr6 (175-215)||(26548275-26548315)
chr6 (173-213)||(28231424-28231464)
chr6 (177-213)||(29680614-29680650)
[»] scaffold0021 (1 HSPs)
scaffold0021 (172-210)||(161162-161200)
[»] chr3 (55 HSPs)
chr3 (166-223)||(7202905-7202963)
chr3 (168-222)||(44675767-44675821)
chr3 (174-215)||(7626458-7626499)
chr3 (174-210)||(42886511-42886547)
chr3 (164-210)||(39779036-39779083)
chr3 (171-210)||(48796220-48796259)
chr3 (172-215)||(50037332-50037375)
chr3 (172-210)||(25340926-25340964)
chr3 (173-210)||(8127485-8127522)
chr3 (172-209)||(54018409-54018446)
chr3 (166-210)||(916454-916498)
chr3 (174-210)||(3695684-3695720)
chr3 (173-209)||(10926491-10926527)
chr3 (172-220)||(33745120-33745168)
chr3 (175-223)||(41030189-41030237)
chr3 (177-213)||(42276397-42276433)
chr3 (173-213)||(47536479-47536519)
chr3 (173-208)||(7738691-7738726)
chr3 (171-210)||(32843264-32843303)
chr3 (171-210)||(41817519-41817558)
chr3 (174-213)||(48022313-48022352)
chr3 (178-208)||(17262204-17262234)
chr3 (172-206)||(21331423-21331457)
chr3 (173-215)||(27065729-27065771)
chr3 (172-210)||(29631207-29631245)
chr3 (172-206)||(32629101-32629135)
chr3 (172-210)||(38130961-38130999)
chr3 (172-206)||(44579657-44579691)
chr3 (175-209)||(45334213-45334247)
chr3 (175-213)||(49710744-49710782)
chr3 (172-210)||(53162219-53162257)
chr3 (177-210)||(334849-334882)
chr3 (174-211)||(2078263-2078300)
chr3 (173-206)||(8957966-8957999)
chr3 (172-209)||(19126680-19126717)
chr3 (173-210)||(20018219-20018256)
chr3 (172-209)||(25727970-25728007)
chr3 (172-213)||(30050427-30050468)
chr3 (172-209)||(32037035-32037072)
chr3 (172-209)||(32909304-32909341)
chr3 (173-210)||(34442449-34442486)
chr3 (173-210)||(34899119-34899156)
chr3 (173-210)||(38034811-38034848)
chr3 (173-210)||(44075158-44075195)
chr3 (173-210)||(45431970-45432007)
chr3 (173-206)||(52119398-52119431)
chr3 (173-213)||(8238586-8238626)
chr3 (175-223)||(20612266-20612314)
chr3 (173-213)||(25955292-25955332)
chr3 (175-219)||(28965770-28965814)
chr3 (177-209)||(47099038-47099070)
chr3 (174-210)||(48656901-48656937)
chr3 (174-210)||(48849765-48849801)
chr3 (177-213)||(52337345-52337381)
chr3 (174-214)||(54742278-54742318)
[»] chr1 (52 HSPs)
chr1 (166-223)||(15668512-15668570)
chr1 (166-210)||(23203336-23203381)
chr1 (172-210)||(1605417-1605455)
chr1 (175-213)||(2596939-2596977)
chr1 (175-213)||(5503764-5503802)
chr1 (172-210)||(8736456-8736494)
chr1 (172-210)||(40735007-40735045)
chr1 (172-210)||(48100743-48100781)
chr1 (177-210)||(13778587-13778620)
chr1 (172-213)||(16967193-16967234)
chr1 (173-210)||(27533265-27533302)
chr1 (173-210)||(29739359-29739396)
chr1 (173-213)||(17669667-17669707)
chr1 (171-210)||(13590130-13590169)
chr1 (174-209)||(44678020-44678055)
chr1 (174-212)||(1091202-1091240)
chr1 (172-206)||(2613743-2613777)
chr1 (172-210)||(11181937-11181975)
chr1 (173-223)||(16475644-16475693)
chr1 (172-206)||(16791389-16791423)
chr1 (172-210)||(17917140-17917178)
chr1 (171-209)||(22346696-22346734)
chr1 (171-213)||(23334608-23334650)
chr1 (172-210)||(25532994-25533032)
chr1 (172-210)||(34521192-34521230)
chr1 (172-206)||(42888596-42888630)
chr1 (172-210)||(45190271-45190309)
chr1 (175-213)||(46838977-46839015)
chr1 (172-213)||(48646724-48646766)
chr1 (175-213)||(52262165-52262203)
chr1 (173-210)||(18335821-18335858)
chr1 (172-213)||(36228588-36228629)
chr1 (172-213)||(39387790-39387831)
chr1 (177-210)||(41763157-41763190)
chr1 (173-210)||(47417805-47417842)
chr1 (174-211)||(48898493-48898530)
chr1 (173-210)||(50040378-50040415)
chr1 (172-209)||(52043294-52043331)
chr1 (170-206)||(4715564-4715600)
chr1 (166-209)||(8551430-8551474)
chr1 (174-206)||(11462928-11462960)
chr1 (174-210)||(13401620-13401656)
chr1 (173-213)||(16033449-16033489)
chr1 (177-213)||(16966971-16967007)
chr1 (173-209)||(21341206-21341242)
chr1 (173-209)||(32007600-32007636)
chr1 (172-212)||(38862123-38862163)
chr1 (174-214)||(39252144-39252184)
chr1 (171-223)||(44860872-44860924)
chr1 (173-213)||(45481515-45481555)
chr1 (175-215)||(49222840-49222880)
chr1 (174-210)||(50250302-50250338)
[»] chr5 (35 HSPs)
chr5 (174-215)||(18789059-18789100)
chr5 (175-223)||(43135024-43135072)
chr5 (172-211)||(10704332-10704371)
chr5 (172-206)||(11637578-11637612)
chr5 (175-213)||(27903137-27903175)
chr5 (173-223)||(34191455-34191505)
chr5 (172-210)||(38495163-38495201)
chr5 (166-210)||(5551283-5551328)
chr5 (166-210)||(6345053-6345097)
chr5 (172-208)||(18331728-18331764)
chr5 (166-210)||(37462126-37462170)
chr5 (166-213)||(776695-776742)
chr5 (164-210)||(22522803-22522850)
chr5 (174-213)||(35493972-35494011)
chr5 (173-212)||(39963515-39963554)
chr5 (176-219)||(41117855-41117898)
chr5 (171-213)||(2839818-2839860)
chr5 (172-210)||(14861949-14861987)
chr5 (173-223)||(35270670-35270720)
chr5 (172-210)||(40715951-40715989)
chr5 (173-219)||(41630105-41630151)
chr5 (171-209)||(42613207-42613245)
chr5 (166-223)||(133554-133611)
chr5 (177-210)||(12670076-12670109)
chr5 (172-209)||(17708095-17708132)
chr5 (171-212)||(20688060-20688101)
chr5 (173-210)||(32234784-32234820)
chr5 (166-210)||(5015295-5015339)
chr5 (172-208)||(16076452-16076488)
chr5 (173-213)||(20125048-20125087)
chr5 (174-206)||(20175850-20175882)
chr5 (177-213)||(21354316-21354352)
chr5 (166-210)||(26166754-26166798)
chr5 (177-209)||(27679524-27679556)
chr5 (173-213)||(37054268-37054308)
[»] chr2 (45 HSPs)
chr2 (166-222)||(4833252-4833309)
chr2 (174-223)||(11551191-11551240)
chr2 (166-223)||(22709099-22709157)
chr2 (172-206)||(24305311-24305345)
chr2 (172-213)||(14735892-14735933)
chr2 (166-210)||(3708708-3708752)
chr2 (166-210)||(11868664-11868708)
chr2 (173-209)||(20120724-20120760)
chr2 (174-210)||(20990906-20990942)
chr2 (166-210)||(21929485-21929529)
chr2 (166-210)||(35360057-35360101)
chr2 (173-209)||(36474784-36474820)
chr2 (174-210)||(41356175-41356211)
chr2 (171-223)||(42791315-42791367)
chr2 (180-223)||(10811097-10811140)
chr2 (175-210)||(12751281-12751316)
chr2 (175-206)||(16221352-16221383)
chr2 (172-215)||(25186239-25186282)
chr2 (171-210)||(36359334-36359373)
chr2 (172-210)||(8091160-8091198)
chr2 (172-210)||(9547411-9547449)
chr2 (173-219)||(9842196-9842241)
chr2 (175-213)||(19159965-19160003)
chr2 (172-210)||(19189846-19189884)
chr2 (179-213)||(34376914-34376948)
chr2 (173-219)||(35194273-35194319)
chr2 (172-210)||(41859873-41859911)
chr2 (177-210)||(4180723-4180756)
chr2 (172-213)||(4238780-4238821)
chr2 (177-210)||(5168581-5168614)
chr2 (173-210)||(11560520-11560557)
chr2 (173-210)||(17328008-17328045)
chr2 (173-210)||(20565077-20565114)
chr2 (171-212)||(24579668-24579709)
chr2 (173-210)||(27017512-27017549)
chr2 (173-210)||(29544649-29544686)
chr2 (173-210)||(31815889-31815926)
chr2 (175-212)||(33866912-33866949)
chr2 (173-209)||(3113730-3113766)
chr2 (175-211)||(23468045-23468081)
chr2 (173-213)||(26400773-26400813)
chr2 (177-209)||(28874555-28874587)
chr2 (174-210)||(30243273-30243309)
chr2 (173-213)||(42347690-42347730)
chr2 (174-210)||(44694711-44694747)
[»] chr4 (54 HSPs)
chr4 (172-212)||(16584949-16584989)
chr4 (173-221)||(25783440-25783488)
chr4 (172-215)||(28435245-28435288)
chr4 (171-214)||(30847980-30848023)
chr4 (172-210)||(9946448-9946486)
chr4 (172-210)||(22040671-22040709)
chr4 (172-210)||(39171372-39171410)
chr4 (172-210)||(43374274-43374312)
chr4 (175-213)||(48226716-48226754)
chr4 (174-215)||(17423174-17423215)
chr4 (171-215)||(675938-675982)
chr4 (174-210)||(1737184-1737220)
chr4 (166-210)||(10261771-10261815)
chr4 (166-210)||(21562640-21562684)
chr4 (172-212)||(22411785-22411825)
chr4 (166-210)||(24079842-24079886)
chr4 (166-210)||(26926712-26926756)
chr4 (166-210)||(43330161-43330205)
chr4 (174-213)||(19997363-19997402)
chr4 (174-213)||(27740763-27740802)
chr4 (172-211)||(49953404-49953443)
chr4 (175-210)||(54857617-54857652)
chr4 (173-223)||(1162930-1162980)
chr4 (172-210)||(11949765-11949803)
chr4 (166-212)||(13633220-13633266)
chr4 (172-210)||(16431637-16431675)
chr4 (172-210)||(19588175-19588213)
chr4 (172-210)||(20383509-20383547)
chr4 (172-210)||(25115070-25115108)
chr4 (172-210)||(31138995-31139033)
chr4 (176-210)||(34042265-34042299)
chr4 (172-206)||(35021473-35021507)
chr4 (173-219)||(49473667-49473713)
chr4 (173-210)||(7230302-7230339)
chr4 (167-219)||(11692667-11692720)
chr4 (175-212)||(13497255-13497292)
chr4 (166-210)||(14088578-14088623)
chr4 (173-210)||(20799396-20799433)
chr4 (172-205)||(25101397-25101430)
chr4 (172-209)||(25593566-25593603)
chr4 (173-210)||(37725723-37725760)
chr4 (172-209)||(48226501-48226538)
chr4 (173-214)||(56096226-56096267)
chr4 (171-219)||(13434894-13434942)
chr4 (166-213)||(16740413-16740461)
chr4 (173-209)||(23619123-23619159)
chr4 (175-215)||(32923200-32923240)
chr4 (172-212)||(37193270-37193310)
chr4 (173-213)||(42845047-42845087)
chr4 (174-210)||(49041983-49042019)
chr4 (171-211)||(49952570-49952610)
chr4 (178-210)||(50152240-50152272)
chr4 (166-210)||(51450227-51450271)
chr4 (171-207)||(55421574-55421610)
[»] scaffold0016 (2 HSPs)
scaffold0016 (175-210)||(204614-204649)
scaffold0016 (173-213)||(99059-99099)
[»] scaffold0011 (2 HSPs)
scaffold0011 (172-219)||(185284-185331)
scaffold0011 (174-210)||(189974-190010)
[»] scaffold1379 (1 HSPs)
scaffold1379 (172-210)||(1657-1695)
[»] scaffold0735 (1 HSPs)
scaffold0735 (172-206)||(1549-1583)
[»] scaffold1149 (1 HSPs)
scaffold1149 (173-210)||(2354-2391)
[»] scaffold0160 (1 HSPs)
scaffold0160 (175-220)||(22935-22980)
[»] scaffold0050 (1 HSPs)
scaffold0050 (173-210)||(53382-53419)
[»] scaffold1160 (1 HSPs)
scaffold1160 (173-205)||(1719-1751)
[»] scaffold1127 (1 HSPs)
scaffold1127 (175-215)||(1162-1202)
[»] scaffold1120 (1 HSPs)
scaffold1120 (175-215)||(1937-1977)
[»] scaffold0038 (1 HSPs)
scaffold0038 (173-213)||(31921-31961)
[»] scaffold0034 (1 HSPs)
scaffold0034 (173-209)||(114957-114993)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-213)||(72774-72814)


Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 22504482 - 22504279
Alignment:
Q  20 aattttcggttcaaaacatacaaatatagtatattttaaagatatcttataggtaaactctagtttgcatcaatttgaagcgtctcttcttaatgacact 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22504482 aattttcggttcaaaacatacaaatatagtatattttaaagatatcttataggtaaactctagtttgcatcaatttgaagcgtctcttcttaatgacact 22504383  T
Q  120 gctttatcttttaattgaattagattagatgtgtgtcctcgttacggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  22504382 gctttatcttttaattgaattagattagatgtgtgtcctcgtgacggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccgatcac 22504283  T
Q  220 tacc 223  Q
    ||||    
T  22504282 tacc 22504279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 37141378 - 37141419
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37141378 tggacaatgcataatatatgcaaggttcggggttcaaactcc 37141419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 41324134 - 41324186
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||||||||||||||| ||||||||  || |||||||||    
T  41324134 ttggacaatgcataaaatatgcaaggttcgaggttcaaatcccggtcactacc 41324186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 8717515 - 8717477
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  8717515 tggacaatgcataatatatgcaaggttcggggttcaaac 8717477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 14279609 - 14279571
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14279609 gacaatgcataaaatatgcaaggttcggggttcgaactc 14279571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 6109190 - 6109231
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  6109190 tggacaatgcataaaatatacaaggttcgtggttcaaactcc 6109231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 24838209 - 24838172
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  24838209 ggacaatgcataaaatatgcaaggtccggggttcaaac 24838172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 26799206 - 26799243
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26799206 ggacaatgcataaaatatgcaaggttcggggttaaaac 26799243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 30694476 - 30694439
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30694476 acaatgcataaaatatgcaaggttcggggtttaaactc 30694439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 12714409 - 12714373
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12714409 ggacaatgcataatatatgcaaggttcggggttcaaa 12714373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 20665409 - 20665365
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  20665409 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 20665365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 30550772 - 30550728
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  30550772 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 30550728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 39139033 - 39138997
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39139033 aatgcataaaatatgtaaggttcggggttcaaactcc 39138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 44215521 - 44215477
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  44215521 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 44215477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 13124400 - 13124365
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13124400 acaatgcataaaatatgcaaggtccggggttcaaac 13124365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 24023452 - 24023417
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24023452 acaatgcataaaatatgcaaggtccggggttcaaac 24023417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 32051573 - 32051534
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  32051573 ttggacaatgcataatatatgcaaggtccggggttcaaac 32051534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 33996092 - 33996131
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  33996092 gacaatgcataatatatgcaaagttcggggttcaaactcc 33996131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 4830029 - 4830063
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||| ||||||||||||||||||||    
T  4830029 tggacaatgcataatatatgcaaggttcggggttc 4830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 5179815 - 5179853
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  5179815 ggacaatgcataatatatacaaggttcggggttcaaact 5179853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 8137956 - 8137994
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  8137956 tggacaatgcataaaatatgcaaagtttggggttcaaac 8137994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 8544634 - 8544588
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||    
T  8544634 aatgtataaaatatgcaaggtctggggttcaaactccagccactacc 8544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 12748922 - 12748960
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  12748922 tggacaatgcataatatatgcaaggtccggggttcaaac 12748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 20275228 - 20275186
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    
T  20275228 ggacaatgcataatacatgcaaggttcggggttcaaaccccag 20275186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 21061855 - 21061813
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    
T  21061855 ggacaatgcataatacatgcaaggttcggggttcaaaccccag 21061813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 23159462 - 23159500
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  23159462 tggacaatgcataatatatgcaagattcggggttcaaac 23159500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 24429820 - 24429854
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||| ||||||||||||||    
T  24429820 tggacaatgcataaaatatgtaaggttcggggttc 24429854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 26196641 - 26196603
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  26196641 acaatgcataatatatgcaaggttcgtggttcaaactcc 26196603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 32115446 - 32115408
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  32115446 tggacaatgcataatatatgtaaggttcggggttcaaac 32115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 32192915 - 32192949
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||| ||||||||||||||||||||    
T  32192915 tggacaatgcataatatatgcaaggttcggggttc 32192949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 33743597 - 33743635
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  33743597 ggacaatgcataaaatatgcaaggtccgaggttcaaact 33743635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 34420902 - 34420864
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  34420902 tggacaatgcataaaatatgcaaggtttgaggttcaaac 34420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 40400003 - 40400045
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  40400003 ggacaatgcataaaatatgcaaagttcgggtttcaaaccccag 40400045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 45049596 - 45049634
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  45049596 tggataatgcataaaatatgtaaggttcggggttcaaac 45049634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 3672663 - 3672618
Alignment:
Q  166 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||    
T  3672663 gttggttgagacaatgcataaaatatgcaaggtttagggttcaaac 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 7869680 - 7869643
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  7869680 ggacaatgcataatatatgcaaggttgggggttcaaac 7869643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 8461875 - 8461838
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  8461875 ggacaatgcataaaatatgcaaggtccggagttcaaac 8461838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 27718934 - 27718893
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  27718934 tggacaatgcataatatatgcaaggtccggagttcaaactcc 27718893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 41860486 - 41860453
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||| |||||||||||||||||||||||||||||    
T  41860486 aatgtataaaatatgcaaggttcggggttcaaac 41860453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4077712 - 4077748
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  4077712 gacaattcataatatatgcaaggttcggggttcaaac 4077748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 7679925 - 7679957
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||| ||||||||||||||||||||    
T  7679925 gacaatgcataatatatgcaaggttcggggttc 7679957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 17641899 - 17641859
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||| ||||||||||||||||||| |||| |||||||    
T  17641899 ggacaatgtataaaatatgcaaggttcgaggtttaaactcc 17641859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 25277251 - 25277211
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactccagtc 217  Q
    ||||||||||||||||||||| |||||||| ||| ||||||    
T  25277251 aatgcataaaatatgcaaggtccggggttcgaaccccagtc 25277211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 26932895 - 26932867
Alignment:
Q  182 ataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||||    
T  26932895 ataaaatatgcaaggttcggggttcaaac 26932867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 28580970 - 28581002
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||||| |||||||||||||||||    
T  28580970 aatgcataaaatatgtaaggttcggggttcaaa 28581002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 29924954 - 29924914
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| ||||||||||||||||||| |||| ||||    
T  29924954 acaatgcataatatatgcaaggttcggggtttaaaccccag 29924914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 30429239 - 30429283
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||    
T  30429239 gttggttgaacaatatataaaatatgcaaggttcggggtttaaac 30429283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 32285760 - 32285796
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  32285760 acaatgcataatatatgcaaggttccgggttcaaact 32285796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 33105415 - 33105455
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  33105415 acaatgcataatatatgcaaggtccggggttcaaaccccag 33105455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 39076543 - 39076575
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||| ||||||||    
T  39076543 gacaatgcataaaatatgcaaggtccggggttc 39076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 39077029 - 39077061
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||| ||||||||    
T  39077029 gacaatgcataaaatatgcaaggtccggggttc 39077061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 48103713 - 48103663
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48103713 ggacaatgcataaaatatgcaaggttcggggttcaaactccagccactacc 48103663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 5963865 - 5963817
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 222  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  5963865 gacaatgcataaaatatgcaaggttcggggttcaaatcccagccactac 5963817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 6023329 - 6023368
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  6023329 ttggacaatgcttaaaatatgcaaggttcggggttcaaac 6023368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 4905297 - 4905335
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  4905297 tggacaatgcataaaatatgcaaggttcggagttcaaac 4905335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19416535 - 19416573
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19416535 tggacaatgcataaaatatgcaaggtccggggttcaaac 19416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 44406895 - 44406846
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 222  Q
    ||||||||||||||||||||||||| || |||||||| |||| |||||||    
T  44406895 ggacaatgcataaaatatgcaaggtccgaggttcaaattccaatcactac 44406846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 19626566 - 19626514
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  19626566 ttggacaatgcataatatatgcaaggtccggggttcaaacaccggccactacc 19626514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 20763169 - 20763213
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  20763169 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 20763213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 29488735 - 29488779
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  29488735 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 29488779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 33232443 - 33232399
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  33232443 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 33232399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 34284585 - 34284541
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  34284585 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 34284541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 46737805 - 46737857
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  46737805 ttggacaatgcataatatatgcaaggtccggggttcaaacaccggccactacc 46737857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 47342698 - 47342734
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaa 208  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47342698 tggacaatgcataaaatatgcaaggtttggggttcaa 47342734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 10026014 - 10026053
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  10026014 ttggacaatgcataaaatatgcaaggtatggggttcaaac 10026053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 14623525 - 14623482
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||||||||||| |||||| |||||||||| |||||    
T  14623525 tggacaatgcataaaatatgtaaggtttggggttcaaattccag 14623482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 35224140 - 35224179
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  35224140 ggacaatgcataaaatatgcaaggtccgggtttcaaactc 35224179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 36755029 - 36755076
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  36755029 gttggtaggacaatgcataatatatgtaaggttcgggattcaaactcc 36755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 36760826 - 36760873
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  36760826 gttggtaggacaatgcataatatatgtaaggttcgggattcaaactcc 36760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 40808200 - 40808161
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  40808200 ttggacagtgcataaaatatgcaaggtccggggttcaaac 40808161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 47677614 - 47677579
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||| |||||||||||||||    
T  47677614 acaatgcataaaatatgcaatgttcggggttcaaac 47677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 1079729 - 1079695
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||||||||||||| |||||||||||    
T  1079729 acaatgcataaaatatgcaaggtccggggttcaaa 1079695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 6781828 - 6781866
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  6781828 tggacaatgcataaaatatgcaaggtccagggttcaaac 6781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 7908614 - 7908648
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||| ||||||||||||||    
T  7908614 tggacaatgcataaaatatgtaaggttcggggttc 7908648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 8084448 - 8084482
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  8084448 tggacaatgcataaaatatgcaaggtccggggttc 8084482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 10244748 - 10244786
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  10244748 tggacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 18773796 - 18773758
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  18773796 tggacaatgcataaaatatgtaaggtccggggttcaaac 18773758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19599166 - 19599204
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  19599166 tggacaatgcataatatatgcaaggtccggggttcaaac 19599204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 27462476 - 27462438
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  27462476 tggacaatgcataatatatgcaaggtccggggttcaaac 27462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 42753566 - 42753524
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  42753566 ggacagtgcataatatatgcaaggtccggggttcaaactccag 42753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 47342475 - 47342433
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||    
T  47342475 ttggacaatgcataatatatgcaaggtccggagttcaaactcc 47342433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 18714470 - 18714507
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  18714470 ggacaatgcataatatatgcaaggtccggggttcaaac 18714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 19578175 - 19578130
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||    
T  19578175 gacaatgcataaaatatgcaaggtctggggttcaaacctcagtcac 19578130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 30397090 - 30397123
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggtt 205  Q
    |||||||||||||||||||| |||||||||||||    
T  30397090 tggacaatgcataaaatatgtaaggttcggggtt 30397123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 36121679 - 36121724
Alignment:
Q  178 atgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||||| |||||||||||| || | |||||||    
T  36121679 atgcataaaatatgcaaggtccggggttcaaaccccggccactacc 36121724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 39280855 - 39280818
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  39280855 acaatgcataatatatgcaaggtccggggttcaaactc 39280818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 39926577 - 39926540
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  39926577 ggacaatgcataatatatgcaatgttcggggttcaaac 39926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 3536301 - 3536253
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  3536301 gttggttggaacaatgcataatatatgtaaggttcgggattcaaactcc 3536253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 18023701 - 18023741
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  18023701 ggacaatgcataatatatgcaaggtccagggttcaaactcc 18023741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 19036148 - 19036104
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  19036148 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 19036104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 20085797 - 20085761
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  20085797 gacaatgcataatatatgcaaggtccggggttcaaac 20085761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 20718488 - 20718532
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  20718488 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 20718532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 23221415 - 23221455
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    |||||||||||| ||||| |||||||| |||||||||||||    
T  23221415 gacaatgcataatatatgtaaggttcgtggttcaaactcca 23221455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 24027096 - 24027053
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    |||||||||||||||||||||| ||||||||||||| || |||||    
T  24027096 acaatgcataaaatatgcaagg-tcggggttcaaaccccggtcac 24027053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 24483936 - 24483896
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  24483936 gacagtgcataatatatgcaaagttcggggttcaaactcca 24483896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 39106698 - 39106666
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||||| ||||||||    
T  39106698 aatgcataaaatatgcaaggttcgaggttcaaa 39106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 42227844 - 42227804
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  42227844 ggacaatgcataatatatgtaaggttcgaggttcaaactcc 42227804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 42829273 - 42829233
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||| | |||||||||||||||    
T  42829273 ggacaatgcataatatatgcaagctccggggttcaaactcc 42829233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 43139292 - 43139324
Alignment:
Q  178 atgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||| ||||||||||||    
T  43139292 atgcataaaatatgcaaggtacggggttcaaac 43139324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 44595675 - 44595635
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  44595675 acaatgcataaaatatgcaaggtccggggttccaacaccag 44595635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 45425476 - 45425508
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||| ||||||||||||||||||||    
T  45425476 gacaatgcataatatatgcaaggttcggggttc 45425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 2681740 - 2681696
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  2681740 gttggttggacaatgcatcaaatatgcaaggttcggggttcaaac 2681696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 26356120 - 26356071
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 222  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  26356120 ggacaatgcataatatatgcaaggttcggggttcaaactccggccactac 26356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 33976259 - 33976303
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  33976259 gttggtaggacaatgcataaaatatgcaaggtccggggttcaaac 33976303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 31895303 - 31895346
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  31895303 gttggttggacaatgcatcaaatatgcaaggctcggggttcaaa 31895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 8629736 - 8629698
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  8629736 tggacaatgcataatatatgcaaggttcggggttcaaac 8629698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 19265562 - 19265524
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19265562 gacaatgcataaaatatgcaaggtccggggttcaaactc 19265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 30579881 - 30579919
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  30579881 ggacaatgcataaaatatgcaaggtttggggttcaaact 30579919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 12735282 - 12735245
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12735282 ggacaatgcataaaatatgcaaggtttggggttcaaac 12735245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 24269904 - 24269937
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggtt 205  Q
    ||||||||||||||||||||||||||||||||||    
T  24269904 tggacaatgcataaaatatgcaaggttcggggtt 24269937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 32053809 - 32053850
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  32053809 tggacaatgcataatatatgcaaggttcgtggttcaaactcc 32053850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 247674 - 247718
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  247674 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 247718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 8393800 - 8393741
Alignment:
Q  164 cggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||| ||||||||||||||||||||| | || ||||||| || | |||||||    
T  8393800 cggttggttggataatgcataaaatatgcaaggtccaggtttcaaaccccggccactacc 8393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 10018414 - 10018461
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  10018414 gttggtaggataatgcataatatatgtaaggttcggggttcaaactcc 10018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 26320603 - 26320557
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||    
T  26320603 tggacaatgcataaaatatgcaagg-tccgggttcaaactccggtcac 26320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 8569730 - 8569768
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  8569730 tggacaatgcataatatatgcaaggtccggggttcaaac 8569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 24623357 - 24623319
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  24623357 tggacaatgcataatatatgtaaggttcggggttcaaac 24623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 788888 - 788925
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  788888 ggacaatgcataatatatgcaaggttcggagttcaaac 788925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 12904354 - 12904317
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  12904354 acaatgcataatatatgcaaggttcggagttcaaactc 12904317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 33824903 - 33824940
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  33824903 ggacaatgcataatatatgcaaggtccggggttcaaac 33824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 5937646 - 5937690
Alignment:
Q  166 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  5937646 gttggttgagacaatgcataaaatatgaaaggtccggggttcaaa 5937690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 12582275 - 12582231
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  12582275 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 12582231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21029401 - 21029369
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||| |||||||||||||||||||||||    
T  21029401 aatgcataatatatgcaaggttcggggttcaaa 21029369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 23635751 - 23635711
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  23635751 acaatgcataatatatgtaaggttcggagttcaaactccag 23635711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 23903345 - 23903309
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| |||||||| |||||||||||||||    
T  23903345 gacaatgcataatatatgcaacgttcggggttcaaac 23903309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 26548275 - 26548315
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||| |||| |||||||||||||||||||||||| ||||    
T  26548275 acaatgtataatatatgcaaggttcggggttcaaaccccag 26548315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 28231464 - 28231424
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  28231464 ggacaatgcataatatatgcaaggtccggggttcacactcc 28231424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 29680614 - 29680650
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  29680614 aatgcataatatatgcaaggttcggtgttcaaactcc 29680650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 161162 - 161200
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||||||||||||||    
T  161162 tggacaatgcataaaatatgcaaggttcggggttcaaac 161200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 7202963 - 7202905
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||    
T  7202963 gttggttggaacaatgcataaaatatgcaaggttcagggttcaaaccccggtcactacc 7202905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 44675767 - 44675821
Alignment:
Q  168 tggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 222  Q
    |||||||||||||||| |||||||||||||||||||||||||  | |||||||||    
T  44675767 tggttggacaatgcatcaaatatgcaaggttcggggttcaaatcctagtcactac 44675821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 7626499 - 7626458
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7626499 gacaatgcataaaatatgcaaggtccggggttcaaactccag 7626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 42886547 - 42886511
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  42886547 gacaatgcataaaatatgcaaggttcggggttcaaac 42886511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 39779036 - 39779083
Alignment:
Q  164 cggttggt-tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  39779036 cggttggtatggacaatgcataatatatgcaaggttcggggttcaaac 39779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 48796259 - 48796220
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  48796259 ttggacaatgcataagatatgcaaggttcggggttcaaac 48796220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 50037332 - 50037375
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  50037332 tggacaatgcataatgtatgcaaggttcggggttcaaactccag 50037375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 25340964 - 25340926
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25340964 tggacaatgcataaaatatgcaaggtccggggttcaaac 25340926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 8127485 - 8127522
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8127485 ggacaatgcataaaatatgcaaggtttggggttcaaac 8127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 54018446 - 54018409
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||||||||| |||||||||    
T  54018446 tggacaatgcataaaatatgcaaggttcagggttcaaa 54018409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 916454 - 916498
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  916454 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 3695720 - 3695684
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3695720 gacaatgcataaaatatgaaaggttcggggttcaaac 3695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 10926491 - 10926527
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10926491 ggacaatgcataatatatgcaaggttcggggttcaaa 10926527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 33745120 - 33745168
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcact 220  Q
    ||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  33745120 tggacaatgcataaaatatgcaaggtctggggttcaaaccccagccact 33745168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 41030189 - 41030237
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  41030189 acaatacataaaatatgcaaggtttgaggttcaaactccggtcactacc 41030237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 42276433 - 42276397
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||| ||||||||||||||||||||||||||||||||    
T  42276433 aatgtataaaatatgcaaggttcggggttcaaactcc 42276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 47536519 - 47536479
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  47536519 ggacaatgcataaaatatgcaaggtccgaggttcaaactcc 47536479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 7738691 - 7738726
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaa 208  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7738691 ggacaatgcataaaatatgcaaggtccggggttcaa 7738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 32843303 - 32843264
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  32843303 ttggacaatgcataaaatatgcaaggtctggggttcaaac 32843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 41817519 - 41817558
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  41817519 ttggacaatgcataatatatgcaaggtccggggttcaaac 41817558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 48022352 - 48022313
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  48022352 gacaatgcataatatatgcaaagttcggggttcaaactcc 48022313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 17262204 - 17262234
Alignment:
Q  178 atgcataaaatatgcaaggttcggggttcaa 208  Q
    |||||||||||||||||||||||||||||||    
T  17262204 atgcataaaatatgcaaggttcggggttcaa 17262234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 21331457 - 21331423
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||| ||||||||||||||||||||    
T  21331457 tggacaatgcataatatatgcaaggttcggggttc 21331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 27065771 - 27065729
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||||||||||||||| | |||||||||| ||||    
T  27065771 ggacaatgcataaaatatgcaaggtccagggttcaaaccccag 27065729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 29631207 - 29631245
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  29631207 tggacaatgcataatatatgcaaggttcgggattcaaac 29631245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 32629101 - 32629135
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  32629101 tggacaatgcataaaatatgcaaggtccggggttc 32629135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 38130999 - 38130961
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  38130999 tggacaatgcataatatatgcaaggtccggggttcaaac 38130961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 44579657 - 44579691
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  44579657 tggacaatgcataaaatatgcaaggtccggggttc 44579691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 45334213 - 45334247
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||| |||||||||||||||||||||||    
T  45334213 acaatgcataatatatgcaaggttcggggttcaaa 45334247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 49710744 - 49710782
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  49710744 acaatgcataaaatatgcaaggtccggagttcaaactcc 49710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 53162219 - 53162257
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  53162219 tggacaatgcataaaatatgcaaggtttgaggttcaaac 53162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 334882 - 334849
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  334882 aatgcataaaatatgcaaggtccggggttcaaac 334849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 2078263 - 2078300
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  2078263 gacaatgcataatatatgcaaggtttggggttcaaact 2078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 8957966 - 8957999
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttc 206  Q
    ||||||||||||| ||||||||||||||||||||    
T  8957966 ggacaatgcataatatatgcaaggttcggggttc 8957999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19126717 - 19126680
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  19126717 tggacaatgcataaaatatgtaaggtttggggttcaaa 19126680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 20018219 - 20018256
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||  |||||||||||    
T  20018219 ggacaatgcataaaatatgcaaggtctggggttcaaac 20018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 25728007 - 25727970
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  25728007 tggacaatgcataatatatgcaaggtccggggttcaaa 25727970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 30050468 - 30050427
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| ||||||||| |||| ||||||||||||    
T  30050468 tggacaatgcataatatatgcaagattcgcggttcaaactcc 30050427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32037072 - 32037035
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  32037072 tggacaatgcataaaatatgcagggtacggggttcaaa 32037035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32909341 - 32909304
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||||||| | |||||||||    
T  32909341 tggacaatgcataaaatatgcaaggtcctgggttcaaa 32909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 34442486 - 34442449
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34442486 ggacaatgcataaaatatgtaaggtccggggttcaaac 34442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 34899119 - 34899156
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  34899119 ggacaatgcataatatatgcaaggtccggggttcaaac 34899156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 38034848 - 38034811
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  38034848 ggacaatacataaaatatgcaaggtccggggttcaaac 38034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 44075195 - 44075158
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  44075195 ggacaatgcataaaatatgcaaggtccggagttcaaac 44075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 45431970 - 45432007
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  45431970 ggacaatgcataatatatgcaaggtccggggttcaaac 45432007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 52119398 - 52119431
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttc 206  Q
    ||||||||||||| ||||||||||||||||||||    
T  52119398 ggacaatgcataatatatgcaaggttcggggttc 52119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 8238586 - 8238626
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  8238586 ggacaatgcataatatatgcaaggtctggggttcaaactcc 8238626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 20612314 - 20612266
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||| |||||||||||| ||||||||||| || | |||||||    
T  20612314 acaatgcataatatatgcaaggtttggggttcaaaccccggccactacc 20612266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 25955332 - 25955292
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  25955332 ggacaatgcataaaacatgcaaggtttggagttcaaactcc 25955292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 28965814 - 28965770
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||| ||||| |||||||||||||||||| || |||||    
T  28965814 acaatgcataatatatgtaaggttcggggttcaaaccccggtcac 28965770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 47099070 - 47099038
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||| |||||||||||||||||||||||    
T  47099070 aatgcataatatatgcaaggttcggggttcaaa 47099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 48656937 - 48656901
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  48656937 gacaatgcataatatatgcaaggtccggggttcaaac 48656901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 48849801 - 48849765
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  48849801 gacaatgcataatatatgcaaggtccggggttcaaac 48849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 52337381 - 52337345
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  52337381 aatgtataaaatatgcaaggttcgggtttcaaactcc 52337345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 54742318 - 54742278
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  54742318 gacaatgcataaaatatgcaaggtttaggattcaaactcca 54742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 15668512 - 15668570
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||    
T  15668512 gttggttggaacaatgcataaaatatgcaaggtccggggttcaaaccccagccactacc 15668570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 23203336 - 23203381
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  23203336 gttggttggaacaatgcataaaatatgcaaggttcggggttcaaac 23203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 1605417 - 1605455
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  1605417 tggacaatgcataaaatatgcaaggtccggggttcaaac 1605455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 2596977 - 2596939
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2596977 acaatgcataaaatatgcaaggtccggggttcaaactcc 2596939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 5503802 - 5503764
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  5503802 acaatgcataaaatatacaaggttcggggttcaaactcc 5503764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 8736456 - 8736494
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  8736456 tggacaatgcataaaatatgcaaggtccggggttcaaac 8736494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 40735045 - 40735007
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40735045 tggacaatgcataaaatatgtaaggttcggggttcaaac 40735007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 48100743 - 48100781
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  48100743 tggacaatgcataaaatatgcaaggtttggggttcaaac 48100781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 13778587 - 13778620
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||||||||||    
T  13778587 aatgcataaaatatgcaaggttcggggttcaaac 13778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 16967234 - 16967193
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  16967234 tggacaatgcataatatatgcaaggttcgaggttcaaactcc 16967193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 27533265 - 27533302
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27533265 ggacaatgcataatatatgcaaggttcggggttcaaac 27533302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 29739359 - 29739396
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  29739359 ggacaatgcataaaatatgcaaggtccggggttcaaac 29739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 17669667 - 17669707
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  17669667 ggacaatgtataatatatgcaaggttcggggttcaaactcc 17669707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 13590130 - 13590169
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  13590130 ttggacaatgcataaaatatgtaaggttcggagttcaaac 13590169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 44678055 - 44678020
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||| |||||||||||||||||||||||    
T  44678055 gacaatgcataatatatgcaaggttcggggttcaaa 44678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 1091202 - 1091240
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  1091202 gacaatgcataatgtatgcaaggttcggggttcaaactc 1091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 2613743 - 2613777
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||| ||||||||||||||    
T  2613743 tggacaatgcataaaatatgtaaggttcggggttc 2613777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 11181975 - 11181937
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  11181975 tggacaatgcatgaaatatgcaaggtgcggggttcaaac 11181937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 16475693 - 16475644
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| |||||||    
T  16475693 ggacaatgcataaaatatgtaag-ttcggggttcaaattccagccactacc 16475644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 16791423 - 16791389
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    ||||||| |||||||||||||||||||||||||||    
T  16791423 tggacaacgcataaaatatgcaaggttcggggttc 16791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 17917178 - 17917140
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  17917178 tggacaatgcataaaatatgtaaggttcgggattcaaac 17917140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 22346696 - 22346734
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  22346696 ttggataatgcataaaatatgcaaggtccggggttcaaa 22346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 23334608 - 23334650
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||||||||||| |  |||||||||||    
T  23334608 ttggacaatgcataaaatatgcaaggtttgaagttcaaactcc 23334650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 25532994 - 25533032
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  25532994 tggacaatgcataatatatgcaaggtccggggttcaaac 25533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 34521230 - 34521192
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  34521230 tggacaatgcataatatatgcaaggtccggggttcaaac 34521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 42888596 - 42888630
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  42888596 tggacaatgcataaaatatgcaaggtccggggttc 42888630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 45190309 - 45190271
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  45190309 tggacaatgcataatatatgcaaggttcgggattcaaac 45190271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 46839015 - 46838977
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  46839015 acaatgcataaaatatgcaatgatcggggttcaaactcc 46838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 48646766 - 48646724
Alignment:
Q  172 tggacaatgcataa-aatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  48646766 tggacaatgcataataatatgcaaggtccggggttcaaactcc 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 52262203 - 52262165
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  52262203 acaatgcataaaatatgcaaagttcgaggttcaaactcc 52262165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 18335858 - 18335821
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  18335858 ggacaatgtataaaatatgcaaggttcagggttcaaac 18335821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 36228588 - 36228629
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  36228588 tggacaatgcataaaatatgcaaggtgcgaagttcaaactcc 36228629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 39387831 - 39387790
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  39387831 tggataatgcataaaatatgcaaggtttggggttcgaactcc 39387790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 41763190 - 41763157
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  41763190 aatgcataaaatatgcaaggtccggggttcaaac 41763157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 47417805 - 47417842
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  47417805 ggacaatgcataatatatgcaaggttcggagttcaaac 47417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 48898530 - 48898493
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  48898530 gacagtgcataatatatgcaaggttcggggttcaaact 48898493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 50040378 - 50040415
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  50040378 ggacaatgcataaaatatgcaaggtccagggttcaaac 50040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 52043294 - 52043331
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  52043294 tggataatgcataaaatatgcaatgttcggggttcaaa 52043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 4715600 - 4715564
Alignment:
Q  170 gttggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||| |||||||||||||||||||||||| |||||||    
T  4715600 gttgaacaatgcataaaatatgcaaggtttggggttc 4715564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 8551474 - 8551430
Alignment:
Q  166 gttggttggacaatgcataaa-atatgcaaggttcggggttcaaa 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||    
T  8551474 gttgattggacaatgcataaagatatgcaaggtccggggttcaaa 8551430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 11462960 - 11462928
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||| ||||||||    
T  11462960 gacaatgcataaaatatgcaaggtccggggttc 11462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 13401620 - 13401656
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  13401620 gacaatgcataatatatgtaaggttcggggttcaaac 13401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 16033489 - 16033449
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  16033489 ggacaatgcataatatatgcaaggtctggggttcaaactcc 16033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 16967007 - 16966971
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaactcc 16966971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 21341206 - 21341242
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  21341206 ggacaatgcataatatatgcaaggttcgaggttcaaa 21341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 32007636 - 32007600
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||| |||||| |||||||||||    
T  32007636 ggacaatgcataaaatatacaaggtccggggttcaaa 32007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 38862123 - 38862163
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  38862123 tggacaatgcataaaatatgcaaggtctggggttcgaactc 38862163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 39252184 - 39252144
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    |||||| ||||| ||||||||||| ||||||||||||||||    
T  39252184 gacaatacataatatatgcaaggtccggggttcaaactcca 39252144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 44860924 - 44860872
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||||| ||||||  ||||||||||| || | |||||||    
T  44860924 ttggacaatgcataaaatatccaaggtctggggttcaaaccccggccactacc 44860872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 45481515 - 45481555
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| |||||||| ||||||    
T  45481515 ggacaatgcataatatatgcaaggtccggggttcgaactcc 45481555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 49222840 - 49222880
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||| || ||||||||||| |||||||||||||||||    
T  49222840 acaatgcacaatatatgcaaggtccggggttcaaactccag 49222880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 50250338 - 50250302
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  50250338 gacaatgcataaaatatacaaggttcagggttcaaac 50250302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 18789059 - 18789100
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  18789059 gacaatgcataaaatatgcaaggttcggggttcaaaccccag 18789100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 43135024 - 43135072
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  43135024 acaatgcataaaatatgcaaggtttggggttcaaaccccagccactacc 43135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 10704371 - 10704332
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10704371 tggacaatgcataaaatatgcaaggtccggggttcaaact 10704332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 11637612 - 11637578
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||||||||||||    
T  11637612 tggacaatgcataaaatatgcaaggttcggggttc 11637578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 27903137 - 27903175
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27903137 acaatgcataatatatgcaaggttcggggttcaaactcc 27903175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 34191455 - 34191505
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||||||||||||| |||||||||||| || | |||||||    
T  34191455 ggacaatgcataaaatatgcaaggtccggggttcaaaccccggccactacc 34191505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 38495163 - 38495201
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  38495163 tggataatgcataaaatatgcaaggttcggggttcaaac 38495201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 5551328 - 5551283
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  5551328 gttggttggaacaatgcataaaatatgcaaggtttggggttcaaac 5551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 6345053 - 6345097
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  6345053 gttggttggacaatgcataaaatatacaaggtacagggttcaaac 6345097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 18331728 - 18331764
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaa 208  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18331728 tggacaatgcataaaatatgcaaggtccggggttcaa 18331764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 37462126 - 37462170
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  37462126 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 37462170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 776695 - 776742
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||    
T  776695 gttgattggacaatgcataaaatatgcaaggtctgaggttcaaactcc 776742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 22522850 - 22522803
Alignment:
Q  164 cggttggt-tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  22522850 cggttggtatggacaatgcataatatatgcaaggtccggggttcaaac 22522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 35494011 - 35493972
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  35494011 gacaatgcataatatatgcaaggttcgggattcaaactcc 35493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 39963515 - 39963554
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  39963515 ggacaatgcataatatatgtaaggttcggggttcaaactc 39963554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 41117855 - 41117898
Alignment:
Q  176 caatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||    
T  41117855 caatgtataaaatatgcaaggttcgaggttcaaactccggtcac 41117898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 2839818 - 2839860
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||    
T  2839818 ttggataatgcataatatatccaaggttcggggttcaaactcc 2839860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 14861949 - 14861987
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  14861949 tggacaatgcataaaatatgctaggtacggggttcaaac 14861987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 35270720 - 35270670
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||||||||||||| | ||||||||||   ||||||||||    
T  35270720 ggacaatgcataaaatatgcaaggtccagggttcaaaccttagtcactacc 35270670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 40715989 - 40715951
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  40715989 tggacaatgcataatatatgcaaggtccggggttcaaac 40715951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 41630151 - 41630105
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||| |||||||||||||||| ||||||| || |||||    
T  41630151 ggacaatgcataatatatgcaaggttcgggattcaaaccccggtcac 41630105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 42613245 - 42613207
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  42613245 ttggacaatgcataaaatatgcaaggtctggggttcaaa 42613207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 133611 - 133554
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||| |||||||||||||| |||||| ||| ||||||| || | |||||||    
T  133611 gttggttggacgatgcataaaatatgtaaggtttgggtttcaaaccccggccactacc 133554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 12670109 - 12670076
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||| ||||||||||||||||||||||||    
T  12670109 aatgcataatatatgcaaggttcggggttcaaac 12670076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 17708095 - 17708132
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||||||||||||| | |||||||    
T  17708095 tggacaatgcataaaatatgcaaggttcagagttcaaa 17708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 20688060 - 20688101
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||    
T  20688060 ttggacaatgcataatatatgcaaggtccggagttcaaactc 20688101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 32234784 - 32234820
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32234784 ggacaatgcataaaatatgcaagg-tcggggttcaaac 32234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 5015295 - 5015339
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||||    
T  5015295 gttggtaggacaatgaataatatatgcaaggttcggagttcaaac 5015339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 16076452 - 16076488
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaa 208  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  16076452 tggacaatgcataatatatgcaaggttcagggttcaa 16076488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 20125048 - 20125087
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  20125048 ggacaatgcataatatatgcaaggttc-gggttcaaactcc 20125087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 20175850 - 20175882
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||| ||||||||||    
T  20175850 gacaatgcataaaatatgcaagattcggggttc 20175882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 21354352 - 21354316
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||| |||||||||||||||||||| |||||||||||    
T  21354352 aatgtataaaatatgcaaggttcggagttcaaactcc 21354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 26166754 - 26166798
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||| ||||||||||||| | ||||||||||    
T  26166754 gttggtcggacaatgcatcaaatatgcaaggtccagggttcaaac 26166798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 27679524 - 27679556
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||| |||||||||||||||||||||||    
T  27679524 aatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 37054308 - 37054268
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||  |||||||||||||||||||||    
T  37054308 ggacaatgcataatatatataaggttcggggttcaaactcc 37054268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 4833252 - 4833309
Alignment:
Q  166 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 222  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  4833252 gttggttgagacaatgcataaaatatgcaaggatcggggttcaaaccccagccactac 4833309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 11551191 - 11551240
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  11551191 gacaatgcataaaatatgcaagattcggggttcaaactccggccactacc 11551240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 22709099 - 22709157
Alignment:
Q  166 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| || | |||||||    
T  22709099 gttggttgagacaatgcataaaatatgcaaggtccggggttcaaaccccggccactacc 22709157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 24305345 - 24305311
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||||||||||||    
T  24305345 tggacaatgcataaaatatgcaaggttcggggttc 24305311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 14735933 - 14735892
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14735933 tggacaatgcataaaatatgtaaggttcgaggttcaaactcc 14735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 3708708 - 3708752
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  3708708 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 3708752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 11868708 - 11868664
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  11868708 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 11868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 20120760 - 20120724
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20120760 ggacaatgcataatatatgcaaggttcggggttcaaa 20120724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 20990942 - 20990906
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20990942 gacaatgcataaaatatgcaaggttcagggttcaaac 20990906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 21929485 - 21929529
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||    
T  21929485 gttggttggacaatgcataaaatatacaaggtcaggggttcaaac 21929529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 35360101 - 35360057
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  35360101 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 35360057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 36474784 - 36474820
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36474784 ggacaatgcataaaatatgcaaggtccggggttcaaa 36474820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 41356175 - 41356211
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41356175 gacaatgcataaaatatacaaggttcggggttcaaac 41356211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 42791315 - 42791367
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  42791315 ttggacaatgcataatatatgcaaggtccggggttcaaaccccggccactacc 42791367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10811097 - 10811140
Alignment:
Q  180 gcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    |||||||||||||||||| |||||||||||| |||| |||||||    
T  10811097 gcataaaatatgcaaggtccggggttcaaaccccagccactacc 10811140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 12751281 - 12751316
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||| |||||||||||||||||||||||||    
T  12751281 acaatgcatagaatatgcaaggttcggggttcaaac 12751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 16221383 - 16221352
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttc 206  Q
    ||||||||||||||||||||||||||||||||    
T  16221383 acaatgcataaaatatgcaaggttcggggttc 16221352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 25186282 - 25186239
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||    
T  25186282 tggacaatgcataatatatgcaaggtccggggttcaaaccccag 25186239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 36359334 - 36359373
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  36359334 ttggacaatgcataatatatgcaaggtccggggttcaaac 36359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 8091198 - 8091160
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  8091198 tggacaatgcataatatatgcaaggtccggggttcaaac 8091160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 9547449 - 9547411
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  9547449 tggacaatgcataatatatgcaaggtttggggttcaaac 9547411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 9842241 - 9842196
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||    
T  9842241 ggacaatgcataaaatatgcaaggtttggggttcgaa-tccagtcac 9842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 19159965 - 19160003
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  19159965 acaatgcataatatatgcaaggttcggagttcaaactcc 19160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 19189884 - 19189846
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  19189884 tggacaatgtataaaatatgcaaggttcggagttcaaac 19189846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 34376914 - 34376948
Alignment:
Q  179 tgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||||| ||||||||||||    
T  34376914 tgcataaaatatgcaaggttcgaggttcaaactcc 34376948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 35194319 - 35194273
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||| |||||||||||| || ||||||||| |||||||    
T  35194319 ggacaatgcataatatatgcaaggtttggagttcaaactgcagtcac 35194273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 41859873 - 41859911
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  41859873 tggacaatgcataaaatatgcaaggtctggggttcaaac 41859911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 4180723 - 4180756
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  4180723 aatgcataaaatatgcaaggtccggggttcaaac 4180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 4238780 - 4238821
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||| ||||| |||||||||||||| ||||||    
T  4238780 tggacaatgcataatatatgtaaggttcggggttcgaactcc 4238821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 5168614 - 5168581
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||| ||||||||||||||||||||||||    
T  5168614 aatgcataatatatgcaaggttcggggttcaaac 5168581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 11560520 - 11560557
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  11560520 ggacaatgcataatatatgcaaggttcagggttcaaac 11560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 17328045 - 17328008
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  17328045 ggacaatgcataaaataagcaaggtccggggttcaaac 17328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 20565114 - 20565077
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20565114 ggacaatgcataatatatgcaaggtccggggttcaaac 20565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 24579709 - 24579668
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
T  24579709 ttggacaatgcataatatatgcaaggtccagggttcaaactc 24579668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 27017549 - 27017512
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  27017549 ggacaatgcataaaataggcaaggtttggggttcaaac 27017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 29544649 - 29544686
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29544649 ggacaatgcataatatatgcaaggtccggggttcaaac 29544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 31815926 - 31815889
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  31815926 ggacaatgcataatatatgcaaggtccggggttcaaac 31815889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 33866912 - 33866949
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  33866912 acaatgcataaaatatgcaaggttcagagttcaaactc 33866949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 3113766 - 3113730
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  3113766 ggacaatgcataaaatatgcaaggtccgggattcaaa 3113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 23468081 - 23468045
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  23468081 acaatgcataatatatgcaaggttgggggttcaaact 23468045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 26400773 - 26400813
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  26400773 ggacaatgcataatatatgcaaggttgggtgttcaaactcc 26400813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 28874587 - 28874555
Alignment:
Q  177 aatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||| ||||||||||||||||||||||||||||    
T  28874587 aatgtataaaatatgcaaggttcggggttcaaa 28874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 30243273 - 30243309
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| |||| |||||||||||||||||||    
T  30243273 gacaatgcataatatatacaaggttcggggttcaaac 30243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 42347690 - 42347730
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  42347690 ggacaatgcataaaatatgcaaggtccagtgttcaaactcc 42347730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 44694711 - 44694747
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| |||||||||| |||||||||||||    
T  44694711 gacaatgcataatatatgcaaggctcggggttcaaac 44694747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 16584989 - 16584949
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  16584989 tggacaatgcataaaatatgcaaggttcggagttcaaactc 16584949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 25783488 - 25783440
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcacta 221  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  25783488 ggacaatgcataatatatgcaaggtccggggttcaaactccggtcacta 25783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 28435288 - 28435245
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  28435288 tggacaatgcataatatatgcaaggttcggggttcaaaccccag 28435245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 30848023 - 30847980
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  30848023 ttggacaatgcataaaatatgcaaggtccgaggttcaaactcca 30847980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 9946448 - 9946486
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  9946448 tggacaatgcataaaatatgcaaggtccggggttcaaac 9946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 22040671 - 22040709
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22040671 tggacaatgcataatatatgcaaggttcggggttcaaac 22040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 39171410 - 39171372
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  39171410 tggacaatgcataaaatatgcaaggttcagggttcaaac 39171372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 43374312 - 43374274
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43374312 tggacaatgcataaaatatgcaaggttcggagttcaaac 43374274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 48226716 - 48226754
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  48226716 acaatgcataaaatatgcaaggtccggggttcaaactcc 48226754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 17423215 - 17423174
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  17423215 gacaatgcataatatatgcaaggtccggggttcaaactccag 17423174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 675938 - 675982
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  675938 ttggacaatgcataatatatgcaaggtccggggttcaaaccccag 675982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 1737184 - 1737220
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||||| ||||||||    
T  1737184 gacaatgcataaaatatgcaaggttcggagttcaaac 1737220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 10261815 - 10261771
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  10261815 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 10261771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 21562640 - 21562684
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  21562640 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 21562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 22411785 - 22411825
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  22411785 tggacaatgcataatatatgtaaggttcggggttcaaactc 22411825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 24079886 - 24079842
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  24079886 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 24079842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 26926756 - 26926712
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  26926756 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 26926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 43330161 - 43330205
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  43330161 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 43330205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 19997402 - 19997363
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  19997402 gacaatgcataatatatgcaaagttcggggttcaaactcc 19997363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 27740763 - 27740802
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  27740763 gacaatgcataaaatatgcaaggttcggagttcgaactcc 27740802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 49953443 - 49953404
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  49953443 tggacaatgcataatatatgcaaggtccggggttcaaact 49953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 54857652 - 54857617
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||| ||||||||||||    
T  54857652 acaatgcataaaatatgcaaggtccggggttcaaac 54857617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 1162980 - 1162930
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 223  Q
    ||||||||||||||||||| ||| |  |||||||||||||||| |||||||    
T  1162980 ggacaatgcataaaatatgtaagatgtggggttcaaactccagccactacc 1162930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 11949803 - 11949765
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11949803 tggacaatgcataatatatgcaaggtccggggttcaaac 11949765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 13633266 - 13633220
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    |||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  13633266 gttggttggacaatacatcaaatatgtaaggtttggggttcaaactc 13633220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 16431637 - 16431675
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  16431637 tggacaatgcataaaatatgcaaggtctggggttcaaac 16431675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19588175 - 19588213
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  19588175 tggacaatgcataaaatatgcaaggtccagggttcaaac 19588213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 20383509 - 20383547
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  20383509 tggacaatgcataatatatgcaaggtccggggttcaaac 20383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 25115070 - 25115108
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  25115070 tggacaatgcataacatatgcaaggttcagggttcaaac 25115108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 31139033 - 31138995
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||| || |||||||||    
T  31139033 tggacaatgcataaaatatgcaaggtccgaggttcaaac 31138995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 34042265 - 34042299
Alignment:
Q  176 caatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||| ||||||||||||||||||||||||    
T  34042265 caatgcataatatatgcaaggttcggggttcaaac 34042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 35021507 - 35021473
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||| ||||||||||||||||||||||||||    
T  35021507 tggacaatacataaaatatgcaaggttcggggttc 35021473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 49473667 - 49473713
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  49473667 ggacaatgcataatatatgcaaggtccggggttcgaaccccagtcac 49473713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 7230302 - 7230339
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  7230302 ggacaatgcataatatatgcaaggtccggggttcaaac 7230339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 11692667 - 11692720
Alignment:
Q  167 ttggttggacaatgcataaaatatgcaaggt-tcggggttcaaactccagtcac 219  Q
    ||||| ||||||||||||| ||||||||||| | |||||||||||||| |||||    
T  11692667 ttggtaggacaatgcataatatatgcaaggtctgggggttcaaactccggtcac 11692720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 13497292 - 13497255
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  13497292 acaatgaataaaatatgcaaggttcagggttcaaactc 13497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 14088578 - 14088623
Alignment:
Q  166 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||    
T  14088578 gttggttggaacaatgtataaaatatacaaggttcggggttcaaac 14088623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 20799433 - 20799396
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20799433 ggacaatgcataatatatgcaaggtccggggttcaaac 20799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 25101430 - 25101397
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggtt 205  Q
    ||||||||||||||||||||||||| ||||||||    
T  25101430 tggacaatgcataaaatatgcaagggtcggggtt 25101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 25593603 - 25593566
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  25593603 tggacgatgcataaaatatgcaaggttcggagttcaaa 25593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 37725760 - 37725723
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  37725760 ggacaatgtataaaatatgcaaggttcggggtttaaac 37725723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 48226538 - 48226501
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  48226538 tggacaatgcataaaatatgcaaggtctggggttcaaa 48226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 56096226 - 56096267
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcca 214  Q
    ||||||||||||| ||||| |||||||| |||||||||||||    
T  56096226 ggacaatgcataatatatgtaaggttcgtggttcaaactcca 56096267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 13434942 - 13434894
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||| |||||    
T  13434942 ttggacaatgcataaaatatgcaaggtccgaagttaaaactccggtcac 13434894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 16740413 - 16740461
Alignment:
Q  166 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    |||||||| |||||||||||||||||||||||||| | ||||| |||||    
T  16740413 gttggttgagacaatgcataaaatatgcaaggttcagtgttcagactcc 16740461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 23619123 - 23619159
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  23619123 ggacaatgcataaaatatacaaagttcggggttcaaa 23619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 32923240 - 32923200
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  32923240 acaatgcataatatatgtaaggttcggggttcaaaccccag 32923200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 37193270 - 37193310
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactc 212  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  37193270 tggacaatgtataatatatgcaaggtccggggttcaaactc 37193310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 42845047 - 42845087
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  42845047 ggacaatgcataatatatgcaaggtccggggttaaaactcc 42845087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 49042019 - 49041983
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  49042019 gacaatgcataatatatgcaaggtccggggttcaaac 49041983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 49952610 - 49952570
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttcaaact 211  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  49952610 ttggacaatgcataatatatgtaaggtccggggttcaaact 49952570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 50152272 - 50152240
Alignment:
Q  178 atgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||| ||||||||||||||||||||||||    
T  50152272 atgcataatatatgcaaggttcggggttcaaac 50152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 51450227 - 51450271
Alignment:
Q  166 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||||    
T  51450227 gttggtaggacaatgcataagatatgcaaggtccggagttcaaac 51450271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 55421610 - 55421574
Alignment:
Q  171 ttggacaatgcataaaatatgcaaggttcggggttca 207  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  55421610 ttggacaatgcataatatatgcaaggttcagggttca 55421574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 204614 - 204649
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||||||| ||||||||||||||||||    
T  204614 acaatgcataaaatatgtaaggttcggggttcaaac 204649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 99059 - 99099
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  99059 ggacaatgcataatatatgcaaggtctggggttcaaactcc 99099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 185284 - 185331
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 219  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||    
T  185284 tggacaatgcataaaatatgcaagatccggggttcaaaccccggtcac 185331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 190010 - 189974
Alignment:
Q  174 gacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  190010 gacaatgcataatatatgtaaggttcggggttcaaac 189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 1657 - 1695
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  1657 tggacaatgcatagtatatgcaaggttcggggttcaaac 1695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 1549 - 1583
Alignment:
Q  172 tggacaatgcataaaatatgcaaggttcggggttc 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  1549 tggacaatgcataaaatatgcaaggtccggggttc 1583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 2354 - 2391
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  2354 ggacaatgcataatatatgcaaggtttggggttcaaac 2391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 22935 - 22980
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccagtcact 220  Q
    ||||||||||||||||||||||| || ||||||||| || ||||||    
T  22935 acaatgcataaaatatgcaaggtccgaggttcaaaccccggtcact 22980  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 53419 - 53382
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaac 210  Q
    |||||||||||||||||||||||||  |||||||||||    
T  53419 ggacaatgcataaaatatgcaaggtctggggttcaaac 53382  T

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Target: scaffold1160 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 1751 - 1719
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggtt 205  Q
    |||||||||||||||||||||||||||| ||||    
T  1751 ggacaatgcataaaatatgcaaggttcgaggtt 1719  T

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Target: scaffold1127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 1202 - 1162
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  1202 acaatgcataatatatgcaaggtccggggttcaaaccccag 1162  T

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Target: scaffold1120 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 1937 - 1977
Alignment:
Q  175 acaatgcataaaatatgcaaggttcggggttcaaactccag 215  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  1937 acaatgcataatatatgcaaggttcgtggttcaaaccccag 1977  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 31961 - 31921
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  31961 ggacaatgcataatatatgcaaggtccggggttcacactcc 31921  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 114957 - 114993
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaa 209  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  114957 ggacagtgcataaaatatgcaaggtccggggttcaaa 114993  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 72814 - 72774
Alignment:
Q  173 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 213  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  72814 ggacaatgcataatatatgcaaggtccagggttcaaactcc 72774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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