View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_260 (Length: 245)
Name: NF10049A_low_260
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_260 |
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Alignment Details
Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 50422866 - 50422786
Alignment:
| Q |
5 |
gtttggtgttcgaacaaaattttatgatctagcgannnnnnnataagctaaaaataagcatatatagaagagactaatggt |
85 |
Q |
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|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
50422866 |
gttttgtgttcgaacaaaattttatgatctagcgatttttttataagctaaaaataagcatatatagaagagactaatggt |
50422786 |
T |
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