View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10049A_low_287 (Length: 241)
Name: NF10049A_low_287
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10049A_low_287 |
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Alignment Details
Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 32268936 - 32268817
Alignment:
Q |
61 |
tcaatgatttctggttcatatctaccagatgagtgttgggaatgtgtcttcaaattcttgaaagacaacaatcgatgcttgaaatctctctccatcgtct |
160 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32268936 |
tcaatgatttctggttcatatttaccagatgagtgttgggaatgtgtcttcaaattcttgaaagacaacaatcgatgcttgaaatctctctccatcgtct |
32268837 |
T |
 |
Q |
161 |
ccaaacagttactctccatc |
180 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
32268836 |
ccaaacagttactctccatc |
32268817 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 41900181 - 41900316
Alignment:
Q |
69 |
ttctggttcatatctaccagatgagtgttgggaatgtgtcttcaaattcttgaaagacaacaatcgatgcttgaaatctctctccatcgtctccaaacag |
168 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| | |||| | ||||||||||||||| |||||||||||||| |
|
|
T |
41900181 |
ttctggttcatatttaccagatgagtgttgggaatgtgtcttcaaattcctcaaagacgataatcactacttgaaatctctctcactcgtctccaaacag |
41900280 |
T |
 |
Q |
169 |
ttactctccatcaccaaccgtcttcgattatctctt |
204 |
Q |
|
|
|| ||||||||||||||| ||||||||| |||||| |
|
|
T |
41900281 |
tttctctccatcaccaacactcttcgattctctctt |
41900316 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 32268825 - 32268755
Alignment:
Q |
148 |
ctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctctttcacagtctatgatcc |
220 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
32268825 |
ctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgat--tctctctcacagtctatgatcc |
32268755 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 41886279 - 41886346
Alignment:
Q |
62 |
caatgatttctggttcatatctaccagatgagtgttgggaatgtgtcttcaaattcttgaaagacaac |
129 |
Q |
|
|
|||||||| ||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
41886279 |
caatgattggtggtttctatttacctgatgagtgttgggaatgtgtcttcaaattcctgaaagacaac |
41886346 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 12846992 - 12846943
Alignment:
Q |
147 |
tctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgat |
196 |
Q |
|
|
||||||| |||| ||||| ||||| |||||||||||||||||||| |||| |
|
|
T |
12846992 |
tctctccctcgtttccaagcagttcctctccatcaccaaccgtctccgat |
12846943 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 15091347 - 15091414
Alignment:
Q |
136 |
tgcttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
|||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||||| ||| ||||| |
|
|
T |
15091347 |
tgcttgaattctctctccctcgtctccaaacagttcctctccatcaccaacagtcttctattttctct |
15091414 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 10168806 - 10168868
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatc |
200 |
Q |
|
|
|||||| ||||| ||| | |||||||||||||| ||||||||||||||| |||||||||||| |
|
|
T |
10168806 |
cttgaattctctatcccttgtctccaaacagttcctctccatcaccaacactcttcgattatc |
10168868 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 10176331 - 10176393
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatc |
200 |
Q |
|
|
|||||| ||||| ||| | |||||||||||||| ||||||||||||||| |||||||||||| |
|
|
T |
10176331 |
cttgaattctctatcccttgtctccaaacagttcctctccatcaccaacactcttcgattatc |
10176393 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 10616250 - 10616209
Alignment:
Q |
75 |
ttcatatctaccagatgagtgttgggaatgtgtcttcaaatt |
116 |
Q |
|
|
||||||| |||| |||||||||||||||||| |||||||||| |
|
|
T |
10616250 |
ttcatatttacctgatgagtgttgggaatgtatcttcaaatt |
10616209 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 2460658 - 2460597
Alignment:
Q |
142 |
aaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
|||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||| ||||| |
|
|
T |
2460658 |
aaatctctctccatggtctccaaacagttcctctccatcaccaatcgtctccgattctctct |
2460597 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 2367656 - 2367729
Alignment:
Q |
124 |
gacaacaatcgatgcttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
|||||||| || | |||| || |||| ||||||||||||||||| || |||||||||||||||||||| ||||| |
|
|
T |
2367656 |
gacaacaaccgctacttggaacctctttccatcgtctccaaacaatttctctccatcaccaaccgtctccgatt |
2367729 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 2547593 - 2547544
Alignment:
Q |
142 |
aaatctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
||||| ||||||||||||||||||||||| || ||||||||||||||||| |
|
|
T |
2547593 |
aaatcgctctccatcgtctccaaacagtttctgtccatcaccaaccgtct |
2547544 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 2381378 - 2381430
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||| |||||||||||||||||||||||||| ||||||||| |||| ||||| |
|
|
T |
2381378 |
tctctttccatcgtctccaaacagttactctcgatcaccaacagtctccgatt |
2381430 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 6007725 - 6007665
Alignment:
Q |
143 |
aatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
||||||||||| ||||||| |||||||| ||||||||||||||| |||| ||||| ||||| |
|
|
T |
6007725 |
aatctctctccctcgtctcgaaacagttcctctccatcaccaacagtctccgattctctct |
6007665 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 566687 - 566629
Alignment:
Q |
139 |
ttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||| ||||||||| | |||||||||||||| |||||||||||| || |||||||||| |
|
|
T |
566687 |
ttgaattctctctccttagtctccaaacagtttctctccatcaccgacagtcttcgatt |
566629 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 2525816 - 2525763
Alignment:
Q |
144 |
atctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
|||||||||| ||||||| |||||||| || |||||||||||| |||||||||| |
|
|
T |
2525816 |
atctctctccctcgtctcaaaacagtttctgtccatcaccaacagtcttcgatt |
2525763 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12124881 - 12124836
Alignment:
Q |
146 |
ctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
|||||||||| ||||||||||| || |||||||||||||||||||| |
|
|
T |
12124881 |
ctctctccattgtctccaaacaatttctctccatcaccaaccgtct |
12124836 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12126937 - 12126892
Alignment:
Q |
146 |
ctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
|||||||||| ||||||||||| || |||||||||||||||||||| |
|
|
T |
12126937 |
ctctctccattgtctccaaacaatttctctccatcaccaaccgtct |
12126892 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 55907434 - 55907499
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
||||||||||||||| | ||||||||||||||| ||||| |||||||| ||||||||| ||||| |
|
|
T |
55907434 |
cttgaaatctctctcaaccgtctccaaacagtttctctcagtcaccaacactcttcgattctctct |
55907499 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 2486365 - 2486313
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||||||| ||||||| |||||||| || ||||||||||||||||| ||||| |
|
|
T |
2486365 |
tctctctccctcgtctcaaaacagtttctgtccatcaccaaccgtctccgatt |
2486313 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 5035680 - 5035628
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||| ||| |||| || |||||||| |||||||||||||||||||||||||| |
|
|
T |
5035680 |
tctctttccttcgtttcaaaacagtttctctccatcaccaaccgtcttcgatt |
5035628 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 1547469 - 1547515
Alignment:
Q |
157 |
gtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
||||||||||| || |||||||||||||||||||| ||||| ||||| |
|
|
T |
1547469 |
gtctccaaacaattcctctccatcaccaaccgtctccgattctctct |
1547515 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 2376228 - 2376278
Alignment:
Q |
139 |
ttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgt |
189 |
Q |
|
|
||||| ||||||||||||||||||||| || |||||||||||||||||| |
|
|
T |
2376228 |
ttgaagtctctctccatcgtctccaaaacttttctctccatcaccaaccgt |
2376278 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 2380123 - 2380161
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcacc |
183 |
Q |
|
|
||||| |||||||||||||||||||||||||| |||||| |
|
|
T |
2380123 |
tctctttccatcgtctccaaacagttactctcgatcacc |
2380161 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 2472153 - 2472104
Alignment:
Q |
142 |
aaatctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
|||||||| ||||| |||||||||||||| ||||||||||||| ||||| |
|
|
T |
2472153 |
aaatctctttccatggtctccaaacagtttttctccatcaccaatcgtct |
2472104 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 8445271 - 8445311
Alignment:
Q |
136 |
tgcttgaaatctctctccatcgtctccaaacagttactctc |
176 |
Q |
|
|
||||| || ||||||||||||||||| |||||||||||||| |
|
|
T |
8445271 |
tgcttaaagtctctctccatcgtctcaaaacagttactctc |
8445311 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 12121009 - 12121049
Alignment:
Q |
156 |
cgtctccaaacagttactctccatcaccaaccgtcttcgat |
196 |
Q |
|
|
|||||| || ||||| ||||||||||||||||||||||||| |
|
|
T |
12121009 |
cgtctcaaagcagttcctctccatcaccaaccgtcttcgat |
12121049 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 513426 - 513493
Alignment:
Q |
136 |
tgcttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
|||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||| ||||| |
|
|
T |
513426 |
tgcttgaaatctctctccgccgtctcaaaacagttactctccatcaccaacaatctccgattctctct |
513493 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 51763146 - 51763197
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgt |
189 |
Q |
|
|
|||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |
|
|
T |
51763146 |
cttgaattctctctccatcgtttccaaacagttcctctccatcacccaccgt |
51763197 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 14821688 - 14821628
Alignment:
Q |
137 |
gcttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||||||| ||||||| |||||||||| ||||| ||||| |||||||| ||||||||||| |
|
|
T |
14821688 |
gcttgaaatgtctctccctcgtctccaagcagttcctctctatcaccaatcgtcttcgatt |
14821628 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 6395833 - 6395781
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||||||| |||||||||| ||||| |||||||||||||| | ||||||||| |
|
|
T |
6395833 |
tctctctccctcgtctccaagcagttcctctccatcaccaatcatcttcgatt |
6395781 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 6427480 - 6427432
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtcttc |
193 |
Q |
|
|
||||||||| |||||||||| ||||| |||||||||||||| ||||||| |
|
|
T |
6427480 |
tctctctccctcgtctccaagcagttcctctccatcaccaatcgtcttc |
6427432 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 6437195 - 6437161
Alignment:
Q |
157 |
gtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
|||||||||||||| |||||||||||||||||||| |
|
|
T |
6437195 |
gtctccaaacagttcctctccatcaccaaccgtct |
6437161 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 7993319 - 7993361
Alignment:
Q |
155 |
tcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
|||||||||||||||| ||||||||||||| |||||| ||||| |
|
|
T |
7993319 |
tcgtctccaaacagttcctctccatcaccagccgtctccgatt |
7993361 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 32152271 - 32152212
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
|||||| || |||||| |||||||||||||||| ||||||||||||||| |||| ||||| |
|
|
T |
32152271 |
cttgaattcactctccctcgtctccaaacagttcctctccatcaccaacagtctccgatt |
32152212 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 39516915 - 39516869
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
||||||||||||||||||| ||| || ||| |||||||||||||||| |
|
|
T |
39516915 |
tctctctccatcgtctccagacaatttctcgccatcaccaaccgtct |
39516869 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 1036176 - 1036241
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattatctct |
203 |
Q |
|
|
||||||||||||||| | ||||||||||||||| ||||| |||||||| ||||||||| ||||| |
|
|
T |
1036176 |
cttgaaatctctctcaaccgtctccaaacagtttctctcagtcaccaacactcttcgattctctct |
1036241 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 44575177 - 44575230
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtct |
191 |
Q |
|
|
|||||| ||||||||||||||||| |||||||| ||||| |||||||| ||||| |
|
|
T |
44575177 |
cttgaagtctctctccatcgtctcaaaacagtttctctcaatcaccaatcgtct |
44575230 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 15837967 - 15838016
Alignment:
Q |
148 |
ctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
||||| || |||||||||||||| |||||||||||||||||||| ||||| |
|
|
T |
15837967 |
ctctcgatggtctccaaacagtttctctccatcaccaaccgtctccgatt |
15838016 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 33161498 - 33161439
Alignment:
Q |
138 |
cttgaaatctctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgatt |
197 |
Q |
|
|
|||||| ||||| ||| |||||||||||||||| ||||||||||| || |||||||||| |
|
|
T |
33161498 |
cttgaattctctatccctcgtctccaaacagtttctctccatcactaatagtcttcgatt |
33161439 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 52085600 - 52085556
Alignment:
Q |
145 |
tctctctccatcgtctccaaacagttactctccatcaccaaccgt |
189 |
Q |
|
|
||||| ||||||||||||||| |||| || ||||||||||||||| |
|
|
T |
52085600 |
tctctttccatcgtctccaaaaagttcctttccatcaccaaccgt |
52085556 |
T |
 |
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
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