View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10049A_low_306 (Length: 236)

Name: NF10049A_low_306
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10049A_low_306
NF10049A_low_306
[»] chr2 (58 HSPs)
chr2 (14-129)||(41569469-41569585)
chr2 (154-232)||(18176996-18177074)
chr2 (154-232)||(41569333-41569411)
chr2 (156-227)||(37257508-37257579)
chr2 (154-227)||(433906-433979)
chr2 (154-233)||(4952416-4952495)
chr2 (154-227)||(29051597-29051668)
chr2 (154-236)||(42223885-42223967)
chr2 (154-227)||(42678805-42678879)
chr2 (154-223)||(4758585-4758654)
chr2 (168-232)||(7552625-7552691)
chr2 (154-223)||(6999014-6999083)
chr2 (154-227)||(31389603-31389676)
chr2 (154-227)||(39213712-39213785)
chr2 (164-227)||(32869892-32869955)
chr2 (175-233)||(5027233-5027291)
chr2 (154-232)||(26738818-26738895)
chr2 (175-232)||(670409-670466)
chr2 (154-219)||(6170686-6170751)
chr2 (154-227)||(7574491-7574564)
chr2 (154-227)||(10711780-10711853)
chr2 (167-232)||(20911870-20911935)
chr2 (154-211)||(28245784-28245841)
chr2 (154-227)||(35705550-35705622)
chr2 (154-227)||(40937006-40937079)
chr2 (15-68)||(41588523-41588576)
chr2 (166-218)||(6941011-6941063)
chr2 (155-223)||(29879899-29879967)
chr2 (164-227)||(2464192-2464254)
chr2 (154-211)||(2221049-2221106)
chr2 (166-227)||(5200168-5200228)
chr2 (154-227)||(9634378-9634451)
chr2 (154-227)||(25881600-25881673)
chr2 (154-227)||(35589329-35589402)
chr2 (154-191)||(36802952-36802989)
chr2 (154-210)||(42532697-42532754)
chr2 (191-227)||(17779475-17779511)
chr2 (167-211)||(18876879-18876923)
chr2 (155-202)||(26277152-26277199)
chr2 (154-204)||(4139272-4139322)
chr2 (168-218)||(4753231-4753281)
chr2 (154-204)||(13347780-13347830)
chr2 (168-218)||(28679387-28679437)
chr2 (154-188)||(34119633-34119667)
chr2 (154-188)||(38560734-38560768)
chr2 (154-211)||(42372535-42372593)
chr2 (154-188)||(42866806-42866840)
chr2 (154-236)||(44711922-44712004)
chr2 (154-227)||(5054664-5054737)
chr2 (154-227)||(9377512-9377585)
chr2 (154-227)||(15269917-15269990)
chr2 (166-227)||(17999620-17999680)
chr2 (154-211)||(18723650-18723707)
chr2 (154-227)||(29712034-29712107)
chr2 (154-223)||(39449323-39449392)
chr2 (167-203)||(13711332-13711368)
chr2 (164-224)||(28244186-28244245)
chr2 (154-209)||(40700251-40700307)
[»] chr5 (38 HSPs)
chr5 (154-232)||(5042304-5042382)
chr5 (154-232)||(18842258-18842336)
chr5 (164-233)||(2688922-2688991)
chr5 (154-227)||(35098947-35099020)
chr5 (164-227)||(33620674-33620737)
chr5 (154-232)||(6930996-6931074)
chr5 (154-227)||(4430878-4430951)
chr5 (154-227)||(8267762-8267835)
chr5 (154-227)||(5821553-5821627)
chr5 (154-227)||(16437506-16437580)
chr5 (154-227)||(37700516-37700588)
chr5 (154-232)||(21064163-21064241)
chr5 (154-227)||(43441794-43441867)
chr5 (164-227)||(15267850-15267913)
chr5 (154-227)||(9581635-9581708)
chr5 (154-227)||(19839928-19840001)
chr5 (154-227)||(8675375-8675448)
chr5 (154-227)||(20770187-20770260)
chr5 (167-236)||(23126274-23126342)
chr5 (154-227)||(2224846-2224920)
chr5 (154-221)||(6517768-6517835)
chr5 (154-236)||(18397098-18397180)
chr5 (165-227)||(41724256-41724318)
chr5 (154-223)||(189649-189718)
chr5 (154-227)||(1839287-1839360)
chr5 (154-227)||(10649491-10649564)
chr5 (154-227)||(15478714-15478787)
chr5 (154-227)||(15952987-15953060)
chr5 (154-227)||(19481124-19481197)
chr5 (154-227)||(34124677-34124750)
chr5 (154-227)||(38704139-38704212)
chr5 (154-227)||(41175648-41175721)
chr5 (168-232)||(39088806-39088869)
chr5 (154-210)||(43196584-43196640)
chr5 (155-189)||(6292178-6292212)
chr5 (154-188)||(21136319-21136353)
chr5 (168-209)||(17402881-17402922)
chr5 (154-223)||(43214005-43214074)
[»] chr8 (43 HSPs)
chr8 (154-232)||(45529183-45529261)
chr8 (154-227)||(1633832-1633905)
chr8 (154-227)||(16966841-16966914)
chr8 (154-232)||(7955944-7956022)
chr8 (154-233)||(11017861-11017940)
chr8 (168-227)||(32843884-32843943)
chr8 (154-232)||(36110194-36110272)
chr8 (154-232)||(11657938-11658015)
chr8 (154-232)||(30135952-30136030)
chr8 (154-232)||(40739850-40739927)
chr8 (154-227)||(7478836-7478908)
chr8 (154-227)||(35564345-35564418)
chr8 (154-232)||(41521024-41521102)
chr8 (154-227)||(41159831-41159904)
chr8 (156-228)||(13971182-13971254)
chr8 (154-212)||(7592905-7592963)
chr8 (154-232)||(37783908-37783986)
chr8 (154-227)||(1871557-1871629)
chr8 (154-227)||(7586105-7586177)
chr8 (155-227)||(32847628-32847701)
chr8 (154-219)||(33589180-33589245)
chr8 (174-227)||(34591340-34591393)
chr8 (154-227)||(36531651-36531723)
chr8 (154-211)||(38234063-38234120)
chr8 (154-227)||(30439448-30439521)
chr8 (154-209)||(4994437-4994492)
chr8 (155-216)||(1366657-1366718)
chr8 (154-211)||(2733044-2733100)
chr8 (154-227)||(16872098-16872171)
chr8 (154-227)||(31597004-31597077)
chr8 (154-198)||(36568014-36568058)
chr8 (154-219)||(6968182-6968248)
chr8 (154-188)||(9549180-9549214)
chr8 (154-227)||(12707205-12707279)
chr8 (154-227)||(16327093-16327167)
chr8 (154-188)||(16613690-16613724)
chr8 (154-224)||(29991468-29991537)
chr8 (154-188)||(34718171-34718205)
chr8 (154-211)||(7472984-7473041)
chr8 (154-210)||(5277663-5277719)
chr8 (154-198)||(6991779-6991823)
chr8 (168-232)||(8645234-8645298)
chr8 (155-223)||(29028907-29028975)
[»] chr3 (52 HSPs)
chr3 (154-227)||(44677426-44677499)
chr3 (154-232)||(37508435-37508513)
chr3 (154-232)||(390865-390943)
chr3 (154-232)||(10206910-10206988)
chr3 (154-232)||(39020096-39020174)
chr3 (154-227)||(32767732-32767805)
chr3 (154-227)||(33375916-33375989)
chr3 (154-233)||(49363187-49363266)
chr3 (154-232)||(28419151-28419229)
chr3 (154-227)||(8821686-8821759)
chr3 (154-232)||(11633669-11633747)
chr3 (154-232)||(43905029-43905107)
chr3 (159-232)||(30909090-30909163)
chr3 (154-227)||(49417631-49417703)
chr3 (154-227)||(54027998-54028071)
chr3 (154-226)||(22371247-22371319)
chr3 (167-227)||(54773695-54773755)
chr3 (154-232)||(39671034-39671112)
chr3 (155-232)||(36121878-36121955)
chr3 (154-219)||(46984582-46984647)
chr3 (155-227)||(54195396-54195469)
chr3 (164-232)||(29634009-29634077)
chr3 (154-227)||(39697164-39697237)
chr3 (154-227)||(39907488-39907561)
chr3 (154-227)||(52937239-52937312)
chr3 (154-223)||(55400055-55400124)
chr3 (154-233)||(46982839-46982918)
chr3 (154-219)||(26996372-26996435)
chr3 (154-227)||(21196180-21196253)
chr3 (154-227)||(24095348-24095421)
chr3 (154-223)||(37927151-37927220)
chr3 (154-227)||(46253678-46253751)
chr3 (154-211)||(50638309-50638366)
chr3 (175-232)||(55013079-55013136)
chr3 (164-227)||(13934545-13934607)
chr3 (157-227)||(24480393-24480463)
chr3 (154-203)||(37035491-37035541)
chr3 (168-217)||(21195842-21195891)
chr3 (154-227)||(24482905-24482978)
chr3 (154-227)||(24645412-24645485)
chr3 (154-227)||(46019518-46019591)
chr3 (154-211)||(49761363-49761420)
chr3 (154-227)||(50206912-50206985)
chr3 (154-227)||(51465856-51465929)
chr3 (154-210)||(52485528-52485585)
chr3 (154-209)||(23770705-23770758)
chr3 (168-218)||(9753409-9753459)
chr3 (154-224)||(31376711-31376780)
chr3 (154-211)||(20080129-20080185)
chr3 (154-210)||(44813406-44813463)
chr3 (154-227)||(51973310-51973383)
chr3 (159-211)||(54694071-54694123)
[»] chr7 (48 HSPs)
chr7 (154-236)||(29162909-29162991)
chr7 (154-232)||(32815224-32815302)
chr7 (154-232)||(40353320-40353398)
chr7 (154-227)||(38779686-38779759)
chr7 (154-227)||(39231670-39231743)
chr7 (154-232)||(13162975-13163053)
chr7 (155-232)||(39332042-39332119)
chr7 (154-232)||(19786016-19786094)
chr7 (154-232)||(37808701-37808779)
chr7 (167-232)||(13906394-13906459)
chr7 (154-232)||(21023054-21023132)
chr7 (167-232)||(41402577-41402642)
chr7 (154-227)||(47078194-47078266)
chr7 (154-232)||(41666859-41666937)
chr7 (154-227)||(13729782-13729855)
chr7 (155-227)||(28036801-28036873)
chr7 (155-227)||(39137209-39137281)
chr7 (172-225)||(41026132-41026185)
chr7 (154-227)||(44184501-44184574)
chr7 (154-227)||(10055574-10055647)
chr7 (154-227)||(21822541-21822614)
chr7 (159-236)||(35588824-35588901)
chr7 (154-223)||(43573489-43573558)
chr7 (168-227)||(26041262-26041320)
chr7 (159-233)||(29002669-29002741)
chr7 (154-224)||(11564949-11565018)
chr7 (154-227)||(18111553-18111627)
chr7 (154-188)||(20482583-20482617)
chr7 (154-227)||(11352916-11352989)
chr7 (154-211)||(21559854-21559911)
chr7 (154-211)||(35452531-35452588)
chr7 (155-227)||(3062387-3062459)
chr7 (159-227)||(12645852-12645920)
chr7 (155-227)||(16980354-16980425)
chr7 (154-210)||(33180669-33180725)
chr7 (185-232)||(46773601-46773648)
chr7 (154-203)||(35600727-35600777)
chr7 (154-227)||(39029914-39029988)
chr7 (157-227)||(39823868-39823937)
chr7 (154-188)||(40231687-40231721)
chr7 (154-188)||(46532558-46532592)
chr7 (154-188)||(47495026-47495060)
chr7 (154-223)||(3343276-3343345)
chr7 (155-188)||(31844586-31844619)
chr7 (154-211)||(36019473-36019529)
chr7 (154-227)||(41399105-41399178)
chr7 (167-216)||(46653040-46653089)
chr7 (159-227)||(4713634-4713702)
[»] chr4 (59 HSPs)
chr4 (154-232)||(41486080-41486158)
chr4 (154-227)||(30079902-30079975)
chr4 (154-232)||(36111332-36111411)
chr4 (154-227)||(624254-624327)
chr4 (155-232)||(51746277-51746354)
chr4 (154-236)||(6141711-6141793)
chr4 (154-232)||(21260354-21260432)
chr4 (154-232)||(33899263-33899341)
chr4 (155-232)||(42959328-42959406)
chr4 (164-227)||(12112693-12112756)
chr4 (154-232)||(5932095-5932172)
chr4 (154-232)||(9118801-9118879)
chr4 (154-232)||(14451449-14451527)
chr4 (154-232)||(51194325-51194403)
chr4 (154-227)||(31076110-31076182)
chr4 (164-227)||(53152263-53152326)
chr4 (154-232)||(25318003-25318080)
chr4 (154-227)||(39344922-39344995)
chr4 (179-232)||(50273010-50273063)
chr4 (154-218)||(37066044-37066108)
chr4 (168-227)||(35820241-35820300)
chr4 (154-232)||(47965795-47965871)
chr4 (154-232)||(26206914-26206992)
chr4 (154-236)||(41082374-41082455)
chr4 (154-211)||(28657399-28657456)
chr4 (167-227)||(17475946-17476005)
chr4 (154-232)||(439197-439275)
chr4 (154-227)||(2999168-2999241)
chr4 (154-223)||(14010064-14010133)
chr4 (154-227)||(26718424-26718497)
chr4 (154-227)||(26731052-26731125)
chr4 (154-227)||(28458319-28458392)
chr4 (154-219)||(30169970-30170035)
chr4 (154-227)||(46405916-46405989)
chr4 (154-227)||(49896608-49896681)
chr4 (154-227)||(54669526-54669598)
chr4 (156-227)||(27326694-27326765)
chr4 (154-232)||(48335610-48335688)
chr4 (154-224)||(51573577-51573647)
chr4 (154-227)||(13086078-13086151)
chr4 (155-188)||(13263378-13263411)
chr4 (154-227)||(22819705-22819778)
chr4 (154-227)||(31657702-31657775)
chr4 (168-226)||(48536366-48536426)
chr4 (166-218)||(2256281-2256333)
chr4 (164-222)||(23822194-23822250)
chr4 (164-210)||(6494852-6494898)
chr4 (154-188)||(21617239-21617273)
chr4 (154-227)||(45143615-45143686)
chr4 (154-227)||(45152384-45152455)
chr4 (154-224)||(45851816-45851885)
chr4 (154-227)||(47099078-47099149)
chr4 (154-227)||(13139204-13139277)
chr4 (154-227)||(18882917-18882990)
chr4 (155-211)||(34995377-34995434)
chr4 (154-223)||(38338868-38338937)
chr4 (167-227)||(12138922-12138982)
chr4 (155-211)||(49768276-49768332)
chr4 (154-198)||(55601672-55601716)
[»] chr6 (30 HSPs)
chr6 (154-227)||(11547471-11547544)
chr6 (154-232)||(3610898-3610976)
chr6 (154-227)||(2075393-2075466)
chr6 (167-227)||(14986686-14986746)
chr6 (154-236)||(2777250-2777331)
chr6 (154-232)||(34504076-34504154)
chr6 (154-232)||(4820307-4820387)
chr6 (166-227)||(30036736-30036797)
chr6 (167-227)||(5327533-5327593)
chr6 (154-227)||(30152472-30152545)
chr6 (154-227)||(335119-335190)
chr6 (154-227)||(754380-754453)
chr6 (154-227)||(13658888-13658960)
chr6 (154-227)||(35213503-35213576)
chr6 (155-227)||(14693194-14693266)
chr6 (154-227)||(14699606-14699679)
chr6 (154-227)||(22341117-22341189)
chr6 (154-218)||(3199016-3199080)
chr6 (167-227)||(32459458-32459518)
chr6 (154-212)||(20822825-20822883)
chr6 (154-227)||(13143324-13143397)
chr6 (168-227)||(1369430-1369489)
chr6 (154-189)||(6531163-6531198)
chr6 (154-203)||(10335606-10335656)
chr6 (154-188)||(32046754-32046788)
chr6 (154-224)||(33421816-33421885)
chr6 (154-227)||(18141243-18141316)
chr6 (168-209)||(23628429-23628470)
chr6 (154-211)||(24842424-24842480)
chr6 (154-210)||(26832702-26832758)
[»] chr1 (63 HSPs)
chr1 (154-227)||(756912-756985)
chr1 (154-233)||(46082057-46082136)
chr1 (154-232)||(1852888-1852966)
chr1 (154-232)||(3603167-3603245)
chr1 (154-232)||(8411655-8411733)
chr1 (154-232)||(20565055-20565133)
chr1 (154-232)||(33024508-33024586)
chr1 (154-232)||(38303625-38303703)
chr1 (154-227)||(7128174-7128247)
chr1 (154-232)||(902694-902772)
chr1 (154-232)||(3024687-3024765)
chr1 (154-232)||(4514391-4514469)
chr1 (154-227)||(9008281-9008354)
chr1 (154-227)||(46172349-46172422)
chr1 (154-218)||(21486268-21486332)
chr1 (155-227)||(26585821-26585893)
chr1 (154-232)||(26837508-26837586)
chr1 (154-227)||(47214264-47214336)
chr1 (154-227)||(51286310-51286382)
chr1 (154-232)||(36779206-36779284)
chr1 (154-232)||(51191844-51191922)
chr1 (154-227)||(32319252-32319324)
chr1 (154-227)||(34008236-34008308)
chr1 (154-227)||(36673674-36673746)
chr1 (154-222)||(21340578-21340646)
chr1 (154-227)||(13489718-13489791)
chr1 (154-227)||(16986994-16987066)
chr1 (154-227)||(50328083-50328156)
chr1 (154-223)||(50781516-50781585)
chr1 (154-223)||(52362538-52362607)
chr1 (154-232)||(1790564-1790642)
chr1 (154-200)||(29586049-29586095)
chr1 (154-227)||(32915014-32915087)
chr1 (154-223)||(40316890-40316959)
chr1 (154-227)||(44632584-44632656)
chr1 (154-227)||(34040440-34040515)
chr1 (154-224)||(48220089-48220159)
chr1 (154-227)||(10889988-10890061)
chr1 (154-227)||(15015454-15015527)
chr1 (154-227)||(19969504-19969577)
chr1 (154-227)||(34254293-34254366)
chr1 (154-227)||(50824797-50824870)
chr1 (154-227)||(52714843-52714916)
chr1 (156-227)||(3226002-3226073)
chr1 (164-227)||(24673132-24673194)
chr1 (164-219)||(37178769-37178824)
chr1 (154-209)||(46543402-46543457)
chr1 (164-223)||(50882056-50882115)
chr1 (154-204)||(8200131-8200181)
chr1 (154-224)||(44789089-44789158)
chr1 (154-224)||(46911349-46911418)
chr1 (154-203)||(49660235-49660285)
chr1 (154-187)||(33054070-33054103)
chr1 (154-227)||(35136900-35136973)
chr1 (154-223)||(36577358-36577427)
chr1 (154-227)||(37588618-37588690)
chr1 (154-227)||(47721465-47721538)
chr1 (154-227)||(47728457-47728530)
chr1 (155-188)||(48624933-48624966)
chr1 (154-211)||(49241463-49241520)
chr1 (169-210)||(50242382-50242423)
chr1 (154-217)||(48261195-48261259)
chr1 (167-227)||(48326037-48326097)
[»] scaffold0471 (1 HSPs)
scaffold0471 (154-232)||(63-141)
[»] scaffold0014 (1 HSPs)
scaffold0014 (154-232)||(122887-122964)
[»] scaffold0449 (1 HSPs)
scaffold0449 (155-232)||(9260-9337)
[»] scaffold0687 (1 HSPs)
scaffold0687 (154-212)||(2253-2311)
[»] scaffold0321 (1 HSPs)
scaffold0321 (154-232)||(19692-19770)
[»] scaffold0136 (1 HSPs)
scaffold0136 (154-227)||(38481-38554)
[»] scaffold0010 (1 HSPs)
scaffold0010 (154-227)||(134245-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (154-227)||(825-899)
[»] scaffold0204 (1 HSPs)
scaffold0204 (154-232)||(23132-23210)
[»] scaffold0532 (1 HSPs)
scaffold0532 (154-227)||(11020-11093)
[»] scaffold0416 (1 HSPs)
scaffold0416 (154-203)||(6914-6963)
[»] scaffold0141 (1 HSPs)
scaffold0141 (159-227)||(11993-12061)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 41569585 - 41569469
Alignment:
Q  14 gaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaat 112  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41569585 gaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaat 41569486  T
Q  113 ttaattaaggtccattt 129  Q
    |||||||||||||||||    
T  41569485 ttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 18176996 - 18177074
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatat 18177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 41569411 - 41569333
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatat 41569333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 37257508 - 37257579
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgtaa 37257579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 433906 - 433979
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaa 433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 4952495 - 4952416
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||| |||||    
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 4952416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 29051668 - 29051597
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaa 29051597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 42223967 - 42223885
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    ||||||||| ||| |||||| ||||||| ||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataatt 42223885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 42678805 - 42678879
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaa 42678879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 4758654 - 4758585
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttcttt 4758585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 7552625 - 7552691
Alignment:
Q  168 tttttactttatctctctattactatggt--ttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatat 7552691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 6999083 - 6999014
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||    
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 6999014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31389603 - 31389676
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||| ||||||| || |||||  ||||||||||||| |||||| ||||||||||||||||    
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaa 31389676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39213785 - 39213712
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| ||||| |||||||  |||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaa 39213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 32869892 - 32869955
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||| |||| || |||||| ||||| ||||||| ||||||||||||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaa 32869955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 5027233 - 5027291
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    |||||||||||||| ||||||||| ||||||||||| | |||||||||||||| |||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 5027291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 26738895 - 26738818
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| || |||||||||| |||||||||||||| |||||||||| |||||||||  || ||||||||||||| ||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatat 26738818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 670466 - 670409
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatat 670409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 6170686 - 6170751
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||    
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaatttttt 6170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 7574491 - 7574564
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||| ||||||  ||||||| ||||||    
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaa 7574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 10711780 - 10711853
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||  ||||||||||||||    
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaa 10711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||| ||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 28245784 - 28245841
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacc 28245841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35705550 - 35705622
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||| |||||| || |||||||||||||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaa 35705622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 40937079 - 40937006
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||    
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaa 40937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  15 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 68  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 6941011 - 6941063
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactacttttt 6941063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 29879899 - 29879967
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||| |||||| ||||||| ||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttccttt 29879967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 2464254 - 2464192
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||| || |||||||||||||    
T  2464254 ttatttttaactttatctctctattgctat-gtttccgtgtcaatactacctttttctttgtaa 2464192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 2221049 - 2221106
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||||||| ||||||    
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacc 2221106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 5200228 - 5200168
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| || |||||||||||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaa 5200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 9634451 - 9634378
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||||    
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaa 9634378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 25881600 - 25881673
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| |||   ||||||  ||||||||||||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaa 25881673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35589402 - 35589329
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaa 35589329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  154 catactcactttattttttactttatctctctattact 191  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 17779475 - 17779511
Alignment:
Q  191 tatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaa 17779511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 18876923 - 18876879
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||||||||||||||||||||| || |||||||||||| ||||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacc 18876879  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 26277152 - 26277199
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgt 202  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  26277152 atactcacattattttttactttatctctctattgctttagtttccgt 26277199  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 4139322 - 4139272
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgc 204  Q
    ||||||||| ||| ||||||| |||||||||||||||| |||||| |||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttttcgtgc 4139272  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 4753231 - 4753281
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    |||||| |||||||||||||| ||||| |||||||| |||||| |||||||    
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactacttttt 4753281  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 13347830 - 13347780
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgc 204  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||    
T  13347830 catactcacattactttttactttatctctctattgctttggttttcgtgc 13347780  T

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Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 28679387 - 28679437
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||||||||||||||| ||||| ||||| || |||||| |||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactacttttt 28679437  T

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Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 34119667 - 34119633
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  34119667 catactcacattattttttactttatctctctatt 34119633  T

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Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 42372535 - 42372593
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  42372535 catactcacattatttttttactttatctctctattcctttgatttccgtgcaaatacc 42372593  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 42866806 - 42866840
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  42866806 catactcacattattttttactttatctctctatt 42866840  T

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Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 44712004 - 44711922
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    |||||||||  |||||||||||||||||||||||| || || ||| ||||| ||||||  || ||||||| |||  |||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataatt 44711922  T

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Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 5054664 - 5054737
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||    
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaa 5054737  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 9377512 - 9377585
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   |||||||||||||    
T  9377512 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaa 9377585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15269917 - 15269990
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||    
T  15269917 catattcacattactttttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaa 15269990  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 17999680 - 17999620
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||||||||||||| || ||| |||||||||| ||  |||||||||||||    
T  17999680 attttttattttatctctctattactttgattttcgtgccaata-catatttttctttgtaa 17999620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 18723650 - 18723707
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| |||||||||||||||||||| |||| || || ||| ||||| ||||||    
T  18723650 catactcacattattttttactttatctctttattgctttgattttcgtgcaaatacc 18723707  T

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Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 29712034 - 29712107
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||   ||| ||||||   |||||||||||||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaa 29712107  T

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Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 39449323 - 39449392
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||    
T  39449323 catactcagattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttcttt 39449392  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 13711368 - 13711332
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtg 203  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtg 13711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 28244245 - 28244186
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 28244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 40700251 - 40700307
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||| |||||    
T  40700251 catactcacattatatttttactttatctctctattactttgattttcgtgtcaata 40700307  T

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Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 5042304 - 5042382
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatat 5042382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 18842336 - 18842258
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 2688991 - 2688922
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatata 2688922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35099020 - 35098947
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaa 35098947  T

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Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 33620674 - 33620737
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaa 33620737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 6931074 - 6930996
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||| ||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatat 6930996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 4430951 - 4430878
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaa 4430878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 8267835 - 8267762
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaa 8267762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 5821627 - 5821553
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactt-ttttctttgtaa 227  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaa 5821553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 16437580 - 16437506
Alignment:
Q  154 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaa 16437506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 37700516 - 37700588
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaa 37700588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 21064241 - 21064163
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||||||| ||||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatat 21064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 43441794 - 43441867
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||||    
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaa 43441867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 15267850 - 15267913
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||| |||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaa 15267913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 9581635 - 9581708
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||   |||||||||||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaa 9581708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19840001 - 19839928
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| |||| || ||||||||||||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaa 19839928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 8675448 - 8675375
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 8675375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 20770187 - 20770260
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaa 20770260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 23126342 - 23126274
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    |||||||| |||||||||||||  ||||||||||||||||| | |||||||||||||||||  |||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataatt 23126274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 2224846 - 2224920
Alignment:
Q  154 catactcactttattttt--tactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || ||||||||  |||||||||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaa 2224920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 6517768 - 6517835
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttct 221  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 18397180 - 18397098
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| ||||| ||||||  ||||||||||||||  |||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataatt 18397098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 41724256 - 41724318
Alignment:
Q  165 tattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||| ||||||||| | |||||||||||  ||||||  ||||||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaa 41724318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 189718 - 189649
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| ||  |||||||||    
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttcttt 189649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 1839360 - 1839287
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| ||||| |||| |  ||||||||||||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaa 1839287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 10649491 - 10649564
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||||    
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaa 10649564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15478714 - 15478787
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| ||||| |||| ||  |||||||||||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaa 15478787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 15953060 - 15952987
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||    
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaa 15952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19481197 - 19481124
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | ||||| |||||||  |||||||||||||    
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaa 19481124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 34124677 - 34124750
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| ||||  |||||||  |||||||||||||    
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaa 34124750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 38704212 - 38704139
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| ||||| |||||||  |||||||||||||    
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaa 38704139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 41175721 - 41175648
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| ||||||   |||||||||||||    
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaa 41175648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 39088869 - 39088806
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||||||||||||||  |||||||||| || |||||||  |||||||||||||| ||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacc-tttttttctttgtaaaatat 39088806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 43196640 - 43196584
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  43196640 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatac 43196584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  155 atactcactttattttttactttatctctctatta 189  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 17402922 - 17402881
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||||||||||||||| ||||| |||||||| |||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtcaata 17402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 43214074 - 43214005
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||  ||||||||||    
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttcttt 43214005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 45529261 - 45529183
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 45529183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 1633905 - 1633832
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaa 1633832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 16966841 - 16966914
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaa 16966914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 7956022 - 7955944
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatat 7955944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 11017861 - 11017940
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||| |||||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatata 11017940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 32843943 - 32843884
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaa 32843884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 36110194 - 36110272
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatat 36110272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 11658015 - 11657938
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatat 11657938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 30136030 - 30135952
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatat 30135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 40739927 - 40739850
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgtaaaatat 40739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 7478836 - 7478908
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaa 7478908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35564345 - 35564418
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||| |||||| ||||  |||| |||||||||||||||||||||||||||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaa 35564418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 41521024 - 41521102
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||||| ||||    
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatat 41521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 41159904 - 41159831
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaa 41159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 13971182 - 13971254
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaat 228  Q
    ||||||| ||| |||  ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgtaat 13971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 7592905 - 7592963
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacca 212  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaatacca 7592963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 37783986 - 37783908
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||||| ||||||||| ||||||||||||| ||||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatat 37783908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 1871629 - 1871557
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| ||||| || |||||||||||||    
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaa 1871557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 7586177 - 7586105
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||| | || |||||||||||||    
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaa 7586105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 32847701 - 32847628
Alignment:
Q  155 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||||| ||||||| ||||||||  | ||||||||||| |||||||||||||||||||||||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaa 32847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 33589245 - 33589180
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| || ||||||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaatatcattttttt 33589180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 34591340 - 34591393
Alignment:
Q  174 ctttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaa 34591393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 36531651 - 36531723
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  |||||||||||||||||||||||||  |||| ||||||||||||||| || |||||||||||||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaa 36531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 38234063 - 38234120
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacc 38234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 30439521 - 30439448
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||   ||||||||||||||    
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaa 30439448  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 4994437 - 4994492
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaata 4994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 1366657 - 1366718
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttt 216  Q
    |||||||  |||||||||||||||||||| |||| ||||| |||||||  ||||||||||||    
T  1366657 atactcaaattattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 2733044 - 2733100
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacc 2733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 16872171 - 16872098
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||||    
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaa 16872098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31597004 - 31597077
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||  |||| |||||||  |||||||||||||    
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaa 31597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggttt 198  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 6968248 - 6968182
Alignment:
Q  154 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||| ||||||||||||||| ||||||  ||||||||||||  |||||| ||||||||    
T  6968248 catactcacattacttttttactttatctgtctattgttatggtttccgtatcaatactactttttt 6968182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 12707205 - 12707279
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-acttttttctttgtaa 227  Q
    ||||||||| ||| |||||| ||||||||||||||  | |||||| ||||  |||||| ||||||||||||||||    
T  12707205 catactcacgttactttttaatttatctctctattgttttggttttcgtgtaaataccaacttttttctttgtaa 12707279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 16327167 - 16327093
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac-cacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaa 16327093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 29991468 - 29991537
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  29991468 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 29991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 7473041 - 7472984
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||| ||||| ||||||    
T  7473041 catactcacattactttttactttatctctctattgctttagttttcgtgcaaatacc 7472984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 5277719 - 5277663
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||||||||| |||||||||||||| || || ||| ||||| |||||    
T  5277719 catactcacattattttttattttatctctctattgctttgattttcgtgcaaatac 5277663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 6991823 - 6991779
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggttt 198  Q
    ||||||||| |||||||||||||||||||||| || || ||||||    
T  6991823 catactcacattattttttactttatctctcttttgctttggttt 6991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 8645234 - 8645298
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||||||||||||||  | |||||||| ||| |||||   |||||||||||||| ||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatat 8645298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 29028975 - 29028907
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||||||| |||||||||| |||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  29028975 atactcacattattttttaatttatctctctattgctttgatttttgtgcaaatacctattttttcttt 29028907  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 44677499 - 44677426
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaa 44677426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 37508513 - 37508435
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 37508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 390865 - 390943
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||    
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatat 390943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 10206988 - 10206910
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatat 10206910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 39020174 - 39020096
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatat 39020096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 32767732 - 32767805
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaa 32767805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 33375916 - 33375989
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaa 33375989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 49363266 - 49363187
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatata 49363187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 28419229 - 28419151
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatat 28419151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 8821686 - 8821759
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgtaa 8821759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 11633669 - 11633747
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatat 11633747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 43905029 - 43905107
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||| ||||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatat 43905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 30909090 - 30909163
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatat 30909163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 49417631 - 49417703
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaa 49417703  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 54027998 - 54028071
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaa 54028071  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 22371247 - 22371319
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgta 226  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgta 22371319  T

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Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 54773755 - 54773695
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaa 54773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 39671112 - 39671034
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||||| ||||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatat 39671034  T

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Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 36121878 - 36121955
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||||||| ||||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatat 36121955  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 54195396 - 54195469
Alignment:
Q  155 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaa 54195469  T

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Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 29634077 - 29634009
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||||| |||||||||||||  |||| ||||||||| |||||||||||||||||||||| ||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatat 29634009  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39697237 - 39697164
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| || ||||||||||||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaa 39697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39907561 - 39907488
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||| || |||||||| |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaa 39907488  T

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Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 52937239 - 52937312
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||| ||||||||||||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaa 52937312  T

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Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 55400055 - 55400124
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||    
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 55400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 46982918 - 46982839
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    ||||||||  ||| ||| |||||||| |||||||| ||||  ||||||||| |||||||||||||||||||||| |||||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatata 46982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 26996372 - 26996435
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||| |||||||| ||||||    
T  26996372 catactcacattattttttactttatctct--attgctatggtttccgtgtcaataccattttttt 26996435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 21196180 - 21196253
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||||||||||||||||||||||| || ||| ||||| |||||   ||||||||||||||    
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaa 21196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 24095421 - 24095348
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| ||||||   |||||||||||||    
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaa 24095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 37927220 - 37927151
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| | ||||||  ||||||||||    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttcttt 37927151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 46253678 - 46253751
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||   ||||||||||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaa 46253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 55013079 - 55013136
Alignment:
Q  175 tttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||| |||||||||||||| ||||| ||||||||||||||||| ||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatat 55013136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 13934607 - 13934545
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||  || |||||||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaataatac-tttttctttgtaa 13934545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 24480463 - 24480393
Alignment:
Q  157 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  |||| ||||||   |||||||||||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaa 24480393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 37035541 - 37035491
Alignment:
Q  154 catactcactttatttttt-actttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttccgtg 37035491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 21195891 - 21195842
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccactttt 217  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| ||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactactttt 21195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 24482978 - 24482905
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| |||||||  |||||||||||||    
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaa 24482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 24645412 - 24645485
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||  ||||||||||||||    
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaa 24645485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 46019518 - 46019591
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||| | ||||||  | ||||||||||||    
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaa 46019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 49761363 - 49761420
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  |||| ||||||    
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacc 49761420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 50206985 - 50206912
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| ||  |||||||||||||    
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaa 50206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 51465929 - 51465856
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 51465856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata 209  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 9753409 - 9753459
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||    
T  9753409 tttttactttatctctctattactttggtttttgtgtcaataccacatttt 9753459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 31376780 - 31376711
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  31376780 catactcacataattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 31376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 20080129 - 20080185
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  20080129 catactcacattatttt-tactttatctctctattgttttggtttccgtgcaaatacc 20080185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 44813463 - 44813406
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||| ||||||    
T  44813463 catactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 51973383 - 51973310
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||| ||||||||||||||||  ||||||||   || |||||| | ||||||||||||||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaa 51973310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 54694123 - 54694071
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  54694123 tcacgttattttttactttatctctctattgctttgattttcgtgcaaatacc 54694071  T

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Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 29162991 - 29162909
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataatt 29162909  T

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Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 32815224 - 32815302
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatat 32815302  T

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Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 40353320 - 40353398
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 40353398  T

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Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 38779759 - 38779686
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaa 38779686  T

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Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39231743 - 39231670
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaa 39231670  T

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Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 13162975 - 13163053
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 13163053  T

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Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 39332042 - 39332119
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

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Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 19786094 - 19786016
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| ||||    
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatat 19786016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 37808779 - 37808701
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| ||||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatat 37808701  T

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Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 13906459 - 13906394
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatat 13906394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 21023132 - 21023054
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| ||||    
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatat 21023054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 41402577 - 41402642
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 41402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 47078266 - 47078194
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaatattac-tttttctttgtaa 47078194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 41666937 - 41666859
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||| ||||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatat 41666859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13729782 - 13729855
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| ||||| ||||||| ||||||||||||||    
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaa 13729855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 28036801 - 28036873
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 28036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 39137209 - 39137281
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaa 39137281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 41026132 - 41026185
Alignment:
Q  172 tactttatctctctattactatggtttccgtgccaataccacttttttctttgt 225  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgt 41026185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 44184574 - 44184501
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaa 44184501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 10055647 - 10055574
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  || | |||||||  |||||||||||||    
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaa 10055574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 21822614 - 21822541
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| ||||  ||||||| ||||||||||||||    
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaa 21822541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 35588901 - 35588824
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||  |||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataatt 35588824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 43573558 - 43573489
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||    
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 43573489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 26041320 - 26041262
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||| ||||| |||||||| |||||| || |||||||||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaa 26041262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 29002669 - 29002741
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    |||| ||| ||||||||||||||||  | |  |||||||||||||||||||| |||||||||||||||| |||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatata 29002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 11564949 - 11565018
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  11564949 catactcacattattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 11565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 18111627 - 18111553
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  ||||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaa 18111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 20482583 - 20482617
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    |||||||||||||||||||||||||||||||||||    
T  20482583 catactcactttattttttactttatctctctatt 20482617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 11352989 - 11352916
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||  |||||||  |||||||||||||    
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaa 11352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 21559854 - 21559911
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  21559854 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacc 21559911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 35452588 - 35452531
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||||||| ||||||    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaatacc 35452531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 3062387 - 3062459
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||  ||||||||||||||    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaa 3062459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 12645920 - 12645852
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||| ||  |||||||||||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaa 12645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 16980354 - 16980425
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| || || ||||||| ||||||||||||||    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaa 16980425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 33180725 - 33180669
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||| |||||    
T  33180725 catactcacattattttttactttatctctctattgttttggttttcgtgcaaatac 33180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 46773648 - 46773601
Alignment:
Q  185 tattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| ||||||||||||||||||||||| |||||||||| ||| ||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatat 46773601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 35600727 - 35600777
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  35600727 catactcacattatttttttactttttctctctattactttggtttccgtg 35600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 39029914 - 39029988
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| | |||||||||   |||||| |||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgtaa 39029988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 39823868 - 39823937
Alignment:
Q  157 actcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| |||||||||||||||||| ||||||  |||  |||||||| |||||| || |||||||||||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaa 39823937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 46532558 - 46532592
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  46532558 catactcacattattttttactttatctctctatt 46532592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 47495026 - 47495060
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  47495026 catactcacattattttttactttatctctctatt 47495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 3343345 - 3343276
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||| |||  |||||||||    
T  3343345 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatcccaactttttcttt 3343276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 31844619 - 31844586
Alignment:
Q  155 atactcactttattttttactttatctctctatt 188  Q
    |||||||| |||||||||||||||||||||||||    
T  31844619 atactcacattattttttactttatctctctatt 31844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 36019473 - 36019529
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||| ||| |||||||    
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacc 36019529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 41399178 - 41399105
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  |||||||||||||||||||||||||  | |||||| ||||  |||||   ||||||||||||||    
T  41399178 catactcatattattttttactttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaa 41399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 46653089 - 46653040
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttt 216  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||| |||||    
T  46653089 ttttttattttatctctttattgctatggtttccgtgtcaatactacttt 46653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 4713634 - 4713702
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||||||||||||||||||||||||    |||||||| ||| ||||||   |||||||||||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaa 4713702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 41486158 - 41486080
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 41486080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 30079902 - 30079975
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaa 30079975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 36111411 - 36111332
Alignment:
Q  154 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 36111332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 624327 - 624254
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaa 624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 51746277 - 51746354
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatat 51746354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 6141793 - 6141711
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    ||||||||| ||| | |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataatt 6141711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 21260354 - 21260432
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatat 21260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 33899341 - 33899263
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| ||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatat 33899263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 42959328 - 42959406
Alignment:
Q  155 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatat 42959406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 12112693 - 12112756
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaa 12112756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 5932172 - 5932095
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatat 5932095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 9118879 - 9118801
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||| ||||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatat 9118801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 14451449 - 14451527
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||| ||||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatat 14451527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 51194325 - 51194403
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| | | |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatat 51194403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31076110 - 31076182
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaa 31076182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 53152326 - 53152263
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaa 53152263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 25318080 - 25318003
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatat 25318003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 39344995 - 39344922
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||||||    
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaa 39344922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 50273063 - 50273010
Alignment:
Q  179 tctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 50273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 37066044 - 37066108
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactacttttt 37066108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 35820241 - 35820300
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaa 35820300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 47965795 - 47965871
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||||||||||||||||||| ||||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatat 47965871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 26206992 - 26206914
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| ||| |||||||||||||||||||||  ||||||||| ||| || |||||||||||||||||||| ||||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatat 26206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 41082374 - 41082455
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||| || |||||||||||||  |||||||    
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataatt 41082455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 28657456 - 28657399
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacc 28657399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 17475946 - 17476005
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaa 17476005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 439275 - 439197
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||| || ||||| ||||| ||||| | | |||||||||||||||||||||| ||||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatat 439197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 2999168 - 2999241
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  |||||||||||||    
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaa 2999241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 14010133 - 14010064
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| ||||| ||||||| ||||||||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttcttt 14010064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 26718424 - 26718497
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||    
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaa 26718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 26731052 - 26731125
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| |||||||  |||||||||||||    
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaa 26731125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 28458392 - 28458319
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaa 28458319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 30170035 - 30169970
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| | | ||||||| ||| ||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttttcataccaatactactctttt 30169970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 46405989 - 46405916
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 46405916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 49896681 - 49896608
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||||  |||||||||||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaa 49896608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 54669598 - 54669526
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||| |||||||||||||||| ||| |||||||||| |||||| || |||||||||||||    
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaa 54669526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 27326765 - 27326694
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| ||||| |||||||  |||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgtaa 27326694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 48335610 - 48335688
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||| ||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 48335688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13086078 - 13086151
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 13086151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 13263411 - 13263378
Alignment:
Q  155 atactcactttattttttactttatctctctatt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  13263411 atactcactttattttttactttatctctctatt 13263378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 22819705 - 22819778
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  |||||||||||||    
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaa 22819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31657702 - 31657775
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  |||||||  ||||||| |||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaa 31657775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 48536366 - 48536426
Alignment:
Q  168 tttttactttatctc--tctattactatggtttccgtgccaataccacttttttctttgta 226  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||| | |||||||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgta 48536426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 2256333 - 2256281
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||||||||||||||||| ||||| |||||||  |||||| |||||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactacttttt 2256281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 23822250 - 23822194
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctt 222  Q
    ||||||||||||||||||||  |||  | ||||||||||||||||| ||||||||||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttctt 23822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 6494898 - 6494852
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtcaatac 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 45143686 - 45143615
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||||    
T  45143686 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaa 45143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 45152455 - 45152384
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||  |||| | |||||| ||||| |||||||  |||||||||||||    
T  45152455 cataatcacattattttttactttatctct--attattttggttttcgtgcaaataccaactttttctttgtaa 45152384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 45851816 - 45851885
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | |||||||||||||||||| ||||||| || ||| |||| |||||||  |||||||||||    
T  45851816 catactcacatcattttttactttatctctttattactttgattttcgtg-caatacctattttttctttg 45851885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 47099078 - 47099149
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||  ||||| ||||| | | ||||||||||||    
T  47099078 catactcacattactttttactttatctctctattgctttggtt--cgtgcaaatactaatattttctttgtaa 47099149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13139204 - 13139277
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| ||||| |||||||  |||||||||||||    
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaa 13139277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 18882990 - 18882917
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||  || ||||||||||||||||||||| || || ||| ||| | ||||||  ||||||||||||||    
T  18882990 catactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaa 18882917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 34995377 - 34995434
Alignment:
Q  155 atactcactttat-tttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||| |||||||    
T  34995377 atactcaccttatgtttttactttcactctctattactttggtttccgtgtcaatacc 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 38338937 - 38338868
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  38338937 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttcttt 38338868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 12138922 - 12138982
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||||||| || |||  |||| ||||||   |||||||||||||    
T  12138922 ttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaa 12138982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 49768332 - 49768276
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    |||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  49768332 atactcatattattttttactttatctctctattgctttgattttcgtgcaaatacc 49768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 55601716 - 55601672
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggttt 198  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  55601716 catactcacattatattttactatatctctctattgctatggttt 55601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 11547544 - 11547471
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaa 11547471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 3610976 - 3610898
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatat 3610898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 2075466 - 2075393
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaa 2075393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 14986746 - 14986686
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaa 14986686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 2777331 - 2777250
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatataatt 236  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataatt 2777250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 34504076 - 34504154
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatat 34504154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 4820307 - 4820387
Alignment:
Q  154 catactcactttattttttactttatctctctattactat--ggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||||||||| ||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 30036797 - 30036736
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaa 30036736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 5327593 - 5327533
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaa 5327533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 30152545 - 30152472
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| |||||||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaa 30152472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 335119 - 335190
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  |||||||| |||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaa 335190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 754453 - 754380
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 754380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13658888 - 13658960
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| |||||| || |||||||||||||    
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaa 13658960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35213576 - 35213503
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 35213503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 14693266 - 14693194
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| |||||||||||||||||||||| || || |||||||||||| ||||||   |||||||||||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaa 14693194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 14699679 - 14699606
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||| ||||||   |||||||||||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaa 14699606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 22341189 - 22341117
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||  | |||| || |||||||||||||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaa 22341117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 3199016 - 3199080
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||| |||||||| | ||||||||| |||| |||||||||||||| |||||| |||||||    
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactacttttt 3199080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 32459518 - 32459458
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 32459458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 20822883 - 20822825
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacca 212  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||    
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacca 20822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 13143397 - 13143324
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||| |  |||||||||||||    
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaa 13143324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 1369430 - 1369489
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||||||||||||||| || || ||| ||||| |||||||  |||||||||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaa 1369489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 6531198 - 6531163
Alignment:
Q  154 catactcactttattttttactttatctctctatta 189  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6531198 catactcacattattttttactttatctctctatta 6531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 10335606 - 10335656
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  10335606 catactcacattatttttttactttctctctctattactttggtttccgtg 10335656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 32046754 - 32046788
Alignment:
Q  154 catactcactttattttttactttatctctctatt 188  Q
    ||||||||| |||||||||||||||||||||||||    
T  32046754 catactcacattattttttactttatctctctatt 32046788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 33421816 - 33421885
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  33421816 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 33421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 18141316 - 18141243
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  || ||||||||||    
T  18141316 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaacttattctttgtaa 18141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 23628429 - 23628470
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgccaata 209  Q
    |||||||||||||||||||||| | |||||||||||| ||||    
T  23628429 tttttactttatctctctattattttggtttccgtgcaaata 23628470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 24842424 - 24842480
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  24842424 catactcacattatttt-tactttatctctctatttttttggtttccgtgcaaatacc 24842480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 26832702 - 26832758
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| | |||||||||||||||||||||||  | |||||| ||||| |||||    
T  26832702 catactcacatcattttttactttatctctctattgttttggttttcgtgcaaatac 26832758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 756912 - 756985
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaa 756985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 46082136 - 46082057
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatata 233  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatata 46082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 1852966 - 1852888
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 1852888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 3603167 - 3603245
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 3603245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 8411733 - 8411655
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatat 8411655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 20565133 - 20565055
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatat 20565055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 33024586 - 33024508
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatat 33024508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 38303703 - 38303625
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatat 38303625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 7128174 - 7128247
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaa 7128247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 902694 - 902772
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||    
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatat 902772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 3024765 - 3024687
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatat 3024687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 4514469 - 4514391
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatat 4514391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 9008281 - 9008354
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaa 9008354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 46172422 - 46172349
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaa 46172349  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 21486332 - 21486268
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttt 218  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 26585893 - 26585821
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaa 26585821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 26837508 - 26837586
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||| ||||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatat 26837586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 47214264 - 47214336
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaa 47214336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 51286382 - 51286310
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaa 51286310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 36779284 - 36779206
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| || ||| ||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatat 36779206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 51191844 - 51191922
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| |||  ||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||| ||||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatat 51191922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 32319324 - 32319252
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| || |||||||||||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaa 32319252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 34008236 - 34008308
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||||||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaa 34008308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 36673746 - 36673674
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaa 36673674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 21340578 - 21340646
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctt 222  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| || |||||||||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttctt 21340646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13489718 - 13489791
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 13489791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 16986994 - 16987066
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||| || |||||||||||||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaa 16987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 50328156 - 50328083
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 50328083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 50781585 - 50781516
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||| ||||||||||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 50781516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 52362538 - 52362607
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||    
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttcttt 52362607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 1790564 - 1790642
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||  ||| ||||||||||||| |||||||  || |||||||||||||||| || |||||||||||||| ||||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatat 1790642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 29586049 - 29586095
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttcc 200  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 32915087 - 32915014
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||||||  |||||||||||||    
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaa 32915014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 40316959 - 40316890
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||    
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttcttt 40316890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 44632584 - 44632656
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||||||||||||||||||||| |||| | ||||||| |||| | || |||||||||||||    
T  44632584 catactcacattattttttactttatctctctattgctatagattccgtgtcaatgctac-tttttctttgtaa 44632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 34040515 - 34040440
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgcca--ataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||||| |  ||||||  |||||||||||||    
T  34040515 catactcacattattttttactttatctctctattactttgattttcgtgcaaatataccaactttttctttgtaa 34040440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 48220159 - 48220089
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| ||||||||||||||||||||||||| || || |||  |||| |||||||  ||||||||||    
T  48220159 catactcacattattttttactttatctctctatttctttgatttttgtgcaaataccaactttttctttg 48220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 10890061 - 10889988
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  ||||||  |||||||||||||    
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaa 10889988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15015454 - 15015527
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| ||||| |||||||  |||||||||||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaa 15015527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19969577 - 19969504
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||  ||||||   ||||||||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaa 19969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 34254366 - 34254293
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||| ||||| |  |||||||||||||    
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaa 34254293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 50824797 - 50824870
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| | || |||||||   |||||||||||||    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaa 50824870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 52714916 - 52714843
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | |||||  |||||||||||||    
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaa 52714843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 3226073 - 3226002
Alignment:
Q  156 tactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||| ||||||||||||||||||||||||| || |||||| ||| | ||||    ||||||||||||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttttcgtacaaatatatattttttctttgtaa 3226002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 24673132 - 24673194
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||| |||||||||||||| || | ||||||||| |||||| | ||||||||||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgtaa 24673194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 37178769 - 37178824
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccactttttt 219  Q
    |||||||||  |||| |||| |||| |||||||||||||| |||||||||||||||    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttt 37178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 46543457 - 46543402
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaata 209  Q
    |||||||||  |||||||||||||||||||||||| || |||||| ||||| ||||    
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaata 46543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 50882115 - 50882056
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    |||||||||||||||||||||||||||| || ||| ||||| |||||   ||||||||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttcttt 50882056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 8200131 - 8200181
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgc 204  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||| |||||    
T  8200131 catactcacattattttttactttatccctctattgctttggttttcgtgc 8200181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 44789158 - 44789089
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  44789158 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 44789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 46911349 - 46911418
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttg 224  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  46911349 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 46911418  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 49660235 - 49660285
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  49660235 catactcacattatttttttactttctctctctattactttggtttccgtg 49660285  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  154 catactcactttattttttactttatctctctat 187  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35136900 - 35136973
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||| |  |||||||||||||    
T  35136900 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacaaactttttctttgtaa 35136973  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 36577427 - 36577358
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttcttt 223  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| |||||||  |||||||||    
T  36577427 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttcttt 36577358  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 37588690 - 37588618
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| ||||| || | ||||||||||||    
T  37588690 catactcacataattttttactttatctctctattgctttgattttcgtg-caatatcaatattttctttgtaa 37588618  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 47721465 - 47721538
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||||    
T  47721465 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaa 47721538  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 47728457 - 47728530
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    |||||||||||||    
T  47728457 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaa 47728530  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 48624933 - 48624966
Alignment:
Q  155 atactcactttattttttactttatctctctatt 188  Q
    |||||||| |||||||||||||||||||||||||    
T  48624933 atactcacattattttttactttatctctctatt 48624966  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 49241520 - 49241463
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 211  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||| ||||| ||||||    
T  49241520 catactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacc 49241463  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 50242382 - 50242423
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgccaatac 210  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  50242382 ttttactttctctctctattactttggttttcgtgccaatac 50242423  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 48261195 - 48261259
Alignment:
Q  154 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccactttt 217  Q
    ||||||||| |||| |||||||||| |||||||||| || ||||||  ||||||||||| |||||    
T  48261195 catactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctctttt 48261259  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 48326037 - 48326097
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||||||||||||||||||||| || || ||| ||| | |||||||  |||||||||||||    
T  48326037 ttttttactttatctctctattgctttgattttcgtacaaataccaactttttctttgtaa 48326097  T

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Target: scaffold0471 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 63 - 141
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatat 141  T

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Target: scaffold0014 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 122887 - 122964
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||| ||||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatat 122964  T

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Target: scaffold0449 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 9260 - 9337
Alignment:
Q  155 atactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||||||  ||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatat 9337  T

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Target: scaffold0687 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 2253 - 2311
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaatacca 212  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaatacca 2311  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 19692 - 19770
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 38481 - 38554
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||  |||||||||||||    
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaa 38554  T

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Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 134318 - 134245
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| |||| |||||||  ||||||||||||||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaa 134245  T

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Target: scaffold1956 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 825 - 899
Alignment:
Q  154 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||| |||| |  ||||||||||||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaa 899  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 23132 - 23210
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaatatat 232  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||  |||||||||||| ||| ||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 23210  T

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Target: scaffold0532 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 11020 - 11093
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||| ||||||   |||||||||||||    
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaa 11093  T

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Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 6914 - 6963
Alignment:
Q  154 catactcactttattttttactttatctctctattactatggtttccgtg 203  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttccgtg 6963  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 11993 - 12061
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaa 227  Q
    |||| ||| |||||||||||||||||||||  | |||||| |||||  ||||||  |||||||||||||    
T  11993 tcacattactttttactttatctctctattgttttggttttcgtgcacataccaactttttctttgtaa 12061  T

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