View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_320 (Length: 231)
Name: NF10049A_low_320
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_320 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 16691422 - 16691234
Alignment:
| Q |
7 |
gaatcatagtgttttcgctgcaacatggaacgttggaggtcaatgcccaagtgggaaccttgatctgagtgattttcttcaggttcgaaatgagccggat |
106 |
Q |
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| T |
16691422 |
gaatcatagtgttttcgctgcaacatggaacgttggaggtcaatgcccaagtgggaaccttgatctgagtgattttcttcaggttcgaaatgagccggat |
16691323 |
T |
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| Q |
107 |
atgtatgttttggggtatgctctctttatctctgccctctcgcgcgtgtgtcatgatttctgattttaattcatgaaaaagttcgtaaa |
195 |
Q |
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| T |
16691322 |
atgtatgttttggggtatgctctctttatctctgcacgctcgcgtgtgtgtcatgatttttgattttaattcatgaaaaagttcgtaaa |
16691234 |
T |
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