View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10049A_low_323 (Length: 230)
Name: NF10049A_low_323
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10049A_low_323 |
 |  |
|
[»] scaffold0098 (1 HSPs) |
 |  |  |
|
[»] scaffold0006 (1 HSPs) |
 |  |  |
|
[»] scaffold0072 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 10070299 - 10070362
Alignment:
Q |
76 |
aaaatatattatcatgagaatggaggtttcttcatcgatatctaaatggatgctaagaactgat |
139 |
Q |
|
|
|||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
10070299 |
aaaacatattatcatgaaaatagaggtttctttatcgatatctaaatggatgctaagaactgat |
10070362 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 5172125 - 5172162
Alignment:
Q |
48 |
cttagctcggttggtaagaacaatgcataaaatatatt |
85 |
Q |
|
|
|||||||||||||||| | ||||||||||||||||||| |
|
|
T |
5172125 |
cttagctcggttggtatggacaatgcataaaatatatt |
5172162 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 26320630 - 26320585
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| |||||||||| ||||||| | |||||||||||||||| |
|
|
T |
26320630 |
gtcatcgtgagcttagctcagttggtatggacaatgcataaaatat |
26320585 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 32149141 - 32149177
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||||||||||||||| |||| |
|
|
T |
32149141 |
agcttagctcagttggtaagaacaatgcataatatat |
32149177 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 241447 - 241406
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||||||||||| |||||||||||||||||| |
|
|
T |
241447 |
tcgtaagcttagctcggttggtatgaacaatgcataaaatat |
241406 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 37463516 - 37463561
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| |||||||||||||||||| ||||||||||||| |||| |
|
|
T |
37463516 |
gtcatcgtgagcttagctcggttggtatgaacaatgcataatatat |
37463561 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 54857684 - 54857637
Alignment:
Q |
35 |
cggtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||| |||| |||||||||||||||||| ||||||||||||||||| |
|
|
T |
54857684 |
cggtcctcgtgagcttagctcggttggtataaacaatgcataaaatat |
54857637 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 9913897 - 9913939
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatata |
83 |
Q |
|
|
|||| |||||||||| ||||||| ||||||||||||||||||| |
|
|
T |
9913897 |
tcgtgagcttagctcagttggtatgaacaatgcataaaatata |
9913939 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 10303574 - 10303533
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||||| |||||||||||||||| |
|
|
T |
10303574 |
tcgtgagcttagctcagttggtaaggacaatgcataaaatat |
10303533 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 31604351 - 31604314
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatata |
83 |
Q |
|
|
|||||| ||| ||||||||||||||||||||||||||| |
|
|
T |
31604351 |
agcttaactcagttggtaagaacaatgcataaaatata |
31604314 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 35287570 - 35287529
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
35287570 |
tcgtgagcttagctcagttggtatgaacaatgcataaaatat |
35287529 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 31780748 - 31780784
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||| |||||||||||||||| |
|
|
T |
31780748 |
agcttagctcagttggtaaggacaatgcataaaatat |
31780784 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 21497661 - 21497706
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| |||||| ||||||||||||||||||||||||| |||| |
|
|
T |
21497661 |
gtcatcgtgagcttaactcggttggtaagaacaatgcataatatat |
21497706 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 3752838 - 3752796
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatata |
83 |
Q |
|
|
|||| ||||||||||||||| || ||||||||||||||||||| |
|
|
T |
3752838 |
tcgtgagcttagctcggttgttatgaacaatgcataaaatata |
3752796 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 17736791 - 17736832
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
17736791 |
tcgtgagcttagctcagttggtatgaacaatgcataaaatat |
17736832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 32957610 - 32957565
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| || ||||||||||||||| ||||||||||||| |||| |
|
|
T |
32957610 |
gtcatcgtgagtttagctcggttggtatgaacaatgcataatatat |
32957565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 4056793 - 4056829
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||||||||||||| ||||||||||| |||| |
|
|
T |
4056793 |
agcttagctcggttggtaaggacaatgcataatatat |
4056829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 27314870 - 27314906
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||| ||| |||||||||||||||||||||||||| |
|
|
T |
27314870 |
agcttaactcagttggtaagaacaatgcataaaatat |
27314906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 29739335 - 29739376
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||||||||||||| ||||||||| |||||||||||||||| |
|
|
T |
29739335 |
tcgttagcttagctcagttggtaaggacaatgcataaaatat |
29739376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 13673543 - 13673584
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| ||||||||||||||||| |||||||||||||||||| |
|
|
T |
13673543 |
tcgtgagcttagctcggttggtttgaacaatgcataaaatat |
13673584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 21015964 - 21016001
Alignment:
Q |
45 |
tagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||||||||| ||||||||||||||||||||| |||| |
|
|
T |
21015964 |
tagcttagctcagttggtaagaacaatgcataatatat |
21016001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 26498055 - 26498100
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| |||||||||| ||||||| | |||||||||||||||| |
|
|
T |
26498055 |
gtcatcgtgagcttagctcagttggtacggacaatgcataaaatat |
26498100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 50595950 - 50595905
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||| |||||||||| |||||| |||||||||||||||||| |
|
|
T |
50595950 |
gtcatcgtgagcttagctcaattggtatgaacaatgcataaaatat |
50595905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 46207752 - 46207799
Alignment:
Q |
35 |
cggtcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||| |||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
46207752 |
cggtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat |
46207799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 13044206 - 13044164
Alignment:
Q |
40 |
atcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||| |||||||||| ||||||||| |||||||||||||||| |
|
|
T |
13044206 |
atcgtgagcttagctcagttggtaaggacaatgcataaaatat |
13044164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 580989 - 580948
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||||||||||| | |||||||||||||||| |
|
|
T |
580989 |
tcgtgagcttagctcggttggtatggacaatgcataaaatat |
580948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 47589616 - 47589575
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
47589616 |
tcgtgagcttagctcagttggtatgaacaatgcataaaatat |
47589575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 13955483 - 13955519
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||| |||||||||||||||||| |
|
|
T |
13955483 |
agcttagctcagttggtatgaacaatgcataaaatat |
13955519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 32862619 - 32862659
Alignment:
Q |
43 |
gttagcttagctcggttggtaagaacaatgcataaaatata |
83 |
Q |
|
|
||||||||| ||| |||||||||||||| |||||||||||| |
|
|
T |
32862619 |
gttagcttaactcagttggtaagaacaacgcataaaatata |
32862659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 35666298 - 35666342
Alignment:
Q |
38 |
tcatcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
||||||| |||||| ||||||||||||| ||||||||||| |||| |
|
|
T |
35666298 |
tcatcgtgagcttaactcggttggtaaggacaatgcataatatat |
35666342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 53705685 - 53705650
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaata |
81 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| |
|
|
T |
53705685 |
agcttagctcagttggtaagaacaatgcataaaata |
53705650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 7868720 - 7868761
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||||||||||||||||| |||| |
|
|
T |
7868720 |
tcgtgagcttagctcagttggtaagaacaatgcataatatat |
7868761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 52575945 - 52575986
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
52575945 |
tcgtaagcttagctcagttggtatgaacaatgcataaaatat |
52575986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 13800670 - 13800706
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||||||||||||||| |||| |
|
|
T |
13800670 |
agcttagctcagttggtaagaacaatgcataatatat |
13800706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 41737799 - 41737835
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||| |||||||||||||||| |
|
|
T |
41737799 |
agcttagctcagttggtaaggacaatgcataaaatat |
41737835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 22619872 - 22619914
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatata |
83 |
Q |
|
|
|||| |||||||||| ||||||| ||||||||||||||||||| |
|
|
T |
22619872 |
tcgtgagcttagctcagttggtatgaacaatgcataaaatata |
22619914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 18391603 - 18391639
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||| |||||||||||||||| |
|
|
T |
18391603 |
agcttagctcagttggtaaggacaatgcataaaatat |
18391639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 5423 - 5464
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| |||||||||| ||||||||||||||||||||| |||| |
|
|
T |
5423 |
tcgtgagcttagctcagttggtaagaacaatgcataatatat |
5464 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 171157 - 171198
Alignment:
Q |
41 |
tcgttagcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||| ||||||||||||||||| |||||||||||||||||| |
|
|
T |
171157 |
tcgtgagcttagctcggttggtttgaacaatgcataaaatat |
171198 |
T |
 |
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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 25698 - 25734
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||||||||||||||| |||| |
|
|
T |
25698 |
agcttagctcagttggtaagaacaatgcataatatat |
25734 |
T |
 |
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Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 9656055 - 9656019
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||| |||||||||||||||| |
|
|
T |
9656055 |
agcttagctcagttggtaaggacaatgcataaaatat |
9656019 |
T |
 |
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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 32878664 - 32878700
Alignment:
Q |
46 |
agcttagctcggttggtaagaacaatgcataaaatat |
82 |
Q |
|
|
|||||||||| ||||||||||||||||||||| |||| |
|
|
T |
32878664 |
agcttagctcagttggtaagaacaatgcataatatat |
32878700 |
T |
 |
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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 35103100 - 35103140
Alignment:
Q |
37 |
gtcatcgttagcttagctcggttggtaagaacaatgcataa |
77 |
Q |
|
|
|||||||| |||||||||| ||||||| ||||||||||||| |
|
|
T |
35103100 |
gtcatcgtgagcttagctcagttggtatgaacaatgcataa |
35103140 |
T |
 |
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