View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_341 (Length: 230)
Name: NF10049A_low_341
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_341 |
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Alignment Details
Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34142474 - 34142580
Alignment:
| Q |
1 |
gcagtttcaaagtgacttttaatatcttgattaatctctcccttgataacattgggctttggcaactctacaatcgaacagagttatccgtgagacagaa |
100 |
Q |
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| T |
34142474 |
gcagtttcaaagtgacttttaatatcttgattaatctctcccttaataacatttggctttggcaactctacaatcgaacagagttatccgtgagacagaa |
34142573 |
T |
|
| Q |
101 |
tccagta |
107 |
Q |
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||||||| |
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| T |
34142574 |
tccagta |
34142580 |
T |
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