View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_377 (Length: 225)
Name: NF10049A_low_377
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_377 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 37 - 219
Target Start/End: Original strand, 37566782 - 37566966
Alignment:
| Q |
37 |
taaactcctcatggtattagtgttacattttttactctaaattcagtgttttaaaaactgaaccgaat--cgaatcagtgggactttttatcgtggttca |
134 |
Q |
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| T |
37566782 |
taaactcctcatggtattagtgttacattttttactctaaattcagtgttttaaaaactgaaccgaatatcgaatcagtgggactttttatcgtggttca |
37566881 |
T |
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| Q |
135 |
acctctttaaaccgtctagtttgtttcgggttttaaaacattgttgaaaacaagcagaggaattaaggatatattaccatgttaa |
219 |
Q |
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||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37566882 |
acctctttaaaccgtctagtttgattcgggttttaaaagattgttgaaaacaagcagaggaattaaggatatattaccatgttaa |
37566966 |
T |
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