View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10049A_low_414 (Length: 212)

Name: NF10049A_low_414
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10049A_low_414
NF10049A_low_414
[»] chr7 (19 HSPs)
chr7 (7-212)||(21792164-21792369)
chr7 (21-187)||(21788407-21788573)
chr7 (21-187)||(21785584-21785750)
chr7 (21-187)||(21992360-21992526)
chr7 (22-187)||(21807970-21808135)
chr7 (24-212)||(15713776-15713964)
chr7 (24-195)||(21623363-21623534)
chr7 (21-212)||(21681803-21681994)
chr7 (21-181)||(21652253-21652413)
chr7 (21-187)||(21772139-21772305)
chr7 (21-212)||(21646896-21647091)
chr7 (21-187)||(21726074-21726240)
chr7 (22-187)||(21714361-21714526)
chr7 (21-181)||(21628309-21628469)
chr7 (21-177)||(21764250-21764406)
chr7 (24-187)||(21745710-21745873)
chr7 (24-181)||(21704827-21704984)
chr7 (24-187)||(21664276-21664442)
chr7 (21-212)||(21689566-21689757)
[»] scaffold0182 (1 HSPs)
scaffold0182 (20-150)||(25588-25718)
[»] chr1 (1 HSPs)
chr1 (27-101)||(18192049-18192123)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 7 - 212
Target Start/End: Complemental strand, 21792369 - 21792164
Alignment:
Q  7 caaaatgcttccaattctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagaga 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  21792369 caaaatgcttccatttctccaagatatgcaacaaagaacatccatccacgaacaatatccatgacagcttttcttcgaggctaccaaagccgtcaagaga 21792270  T
Q  107 cttgccggttaaagttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaatgctttcagtg 206  Q
    ||||| |||||||||||||||||||||||||||| || |||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  21792269 cttgcgggttaaagttaaaacatcatcgctaaaacgatccttcagcgtatcaatgttatcggcaatctttttgtgcagatctttcagaatgctttcagtt 21792170  T
Q  207 tttttg 212  Q
    ||||||    
T  21792169 tttttg 21792164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 21788573 - 21788407
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21788573 ttctctaagatatacaacaaagaacatccatccacgaacaacatccacgacagcttttcttcgaggcttccaaagccttcaagagacttgccagttaaag 21788474  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  21788473 ttaaaacatcgtcgccaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgcagatc 21788407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 21785750 - 21785584
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  21785750 ttctccaagatatgtagcaaagaacatccatccacaaacaacatccacgacagcttttcttcaaggctaccaaagtcttcaagagactggccggttaaag 21785651  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  21785650 ttaaaacatcatcgctaaaatgacccttcagttcattaatgttatcggcaatctttttgtgtagatc 21785584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 21992526 - 21992360
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | |||||    
T  21992526 ttctctaagatatacaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggcttccaaagccttcaagagactttccagctaaag 21992427  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||  |||||||||||| |||||    
T  21992426 ttaaaacatcgtcactaaaatgacccttcagttcatcaatgttatcgataatctttttgtgtagatc 21992360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 21807970 - 21808135
Alignment:
Q  22 tctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagt 121  Q
    ||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  21807970 tctccaagatataaagcaaagagcatccatccacgaacaacatccatgacagcttttcttcaaggctaccaaagccttcaagagactggccggttaaagt 21808069  T
Q  122 taaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||||||||| |||| ||||||||||||||| ||||| |||||||| |||||||||||||| |||||    
T  21808070 taaaacatcgtcgccaaaatgacccttcagttcatcgatgttatcagcaatctttttgtgtagatc 21808135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 15713964 - 15713776
Alignment:
Q  24 tccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagtta 123  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||| |||||||||||||    
T  15713964 tccaagatatgcagcaaagagcatccatccacgaacaacatccatgacagcttttcttctaggctaccaaatccttgaagtgactttccggttaaagtta 15713865  T
Q  124 aaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaatgctttcagtgtttttg 212  Q
    ||||||| || |||||||||| |||||| |||||||||||||| ||||||||||||||||| || |   |||||||| |||||||||||    
T  15713864 aaacatcgtcactaaaatgacacttcagttcatcaatgttatcagcaatctttttgtgcagttcctctagaatgcttccagtgtttttg 15713776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 21623534 - 21623363
Alignment:
Q  24 tccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagtta 123  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||  | |||||||||||||||||||||||| |||||||||||||    
T  21623534 tccatgatatgcagcaaagaacatccatccacgaacaacatccacgacagcttttctttaatgctaccaaagccttcaagagactttccggttaaagtta 21623435  T
Q  124 aaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaa 195  Q
    ||||||| || ||||||||||||||||| |||||||| ||||| |||||||| ||||||| ||| |||||||    
T  21623434 aaacatcgtcactaaaatgacccttcagttcatcaatattatcagcaatcttgttgtgcatatccttctgaa 21623363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 21681994 - 21681803
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||| ||||||  | ||||||||||||||| |||||||||||    
T  21681994 ttctccaagatatgtagcaaagaacatccatccacgaacaacatccatgataacttttcttcaaggctatgatagccttcaagagactcgccggttaaag 21681895  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaatgctttcagtgtttttg 212  Q
    |||||||||| ||||||||||| |||||||  |||||||||||||| ||||| |||||||  ||||| || ||||||||| |||||||||||    
T  21681894 ttaaaacatcgtcgctaaaatggcccttcaattcatcaatgttatcagcaatttttttgtatagatccttttgaatgcttccagtgtttttg 21681803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 21652413 - 21652253
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||| |||||||    
T  21652413 ttctccaagatatgcagcaacgaacatccatccacgaacaacatccacgacaacttttcttcaaggctatcaaagccttcaagagacttgccagttaaag 21652314  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtg 181  Q
    |||||||||| ||||||||||||||||| || || | ||| ||||||||||||||||||||    
T  21652313 ttaaaacatcgtcgctaaaatgaccctttagttcgttaattttatcggcaatctttttgtg 21652253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 21772305 - 21772139
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||||   | |||| |||    
T  21772305 ttctccaagatatacagcaaagaacatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaag 21772206  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21772205 ttaaaacatcatcgtcaaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagatc 21772139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 21647091 - 21646896
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccat----ccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggtt 116  Q
    ||||| |||||||||| ||||||||||||||    |||||||||| ||||| |||| ||||||||| |||||||  ||||||| |||||||||||||||     
T  21647091 ttctctaagatatgcagcaaagaacatccatatatccacgaacaatatccacgacaacttttcttcaaggctacggaagcctttaagagacttgccggtc 21646992  T
Q  117 aaagttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaatgctttcagtgtttttg 212  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||| |||| ||| ||| | |||||||||    
T  21646991 aaagttaaaacgtcgtcgctaaaatgacccttcagttcatcaatgttatctacaatctttttgtgtagatccttcttaattcttcccgtgtttttg 21646896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 21726240 - 21726074
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||   | |||| |||    
T  21726240 ttctccaagatatacagcaaagaacatccatccacgaacaacatccacgacagcttttcttcaaggctacgaaagcctgcaagagaccatctggttgaag 21726141  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
     ||||||||| |||  ||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21726140 ctaaaacatcgtcgtcaaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagatc 21726074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 21714526 - 21714361
Alignment:
Q  22 tctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagt 121  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||   | |||| |||     
T  21714526 tctccaagatatgaagcaaagaacatccatccacgaacaacatccacgatagcttttcttcaaggctaccaaagccttcaagagaccaactggttgaagc 21714427  T
Q  122 taaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||||||||| | |  ||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21714426 taaaacatcgttgtcaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgtagatc 21714361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 21628469 - 21628309
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||||||  | |||||| ||||||||||||||||||||||| |||||||||||||| ||||  |||||||||| |||||| || || ||||||     
T  21628469 ttctccaagatataaagcaaagagcatccatccacgaacaacatccacgacagcttttcttcaaggcatccaaagccttgaagagagtttcccgttaaat 21628370  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtg 181  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  21628369 ttaaaacatcgtcgctaaaacgacccttcagttcatcaatgttatcagcaatctttttgtg 21628309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 21764406 - 21764250
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||| ||  | |||||| ||||||||||||||||||||||| |||| ||||||||| ||||||  |||||||||||||||||| || |||||||    
T  21764406 ttctccaagagataaagcaaagagcatccatccacgaacaacatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccagttaaag 21764307  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttt 177  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||    
T  21764306 ttaaaacatcatcgctaaaacgacccttcagttcatcgatgttatcagcaatctttt 21764250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 21745873 - 21745710
Alignment:
Q  24 tccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagtta 123  Q
    ||||||||||| | ||||||||||||||| ||||| |||||||| |||||||||||||| ||||   ||||||||| |||||| || || ||||||||||    
T  21745873 tccaagatatggagcaaagaacatccatctacgaataacatccacgacagcttttcttcaaggcattcaaagccttgaagagaatttccagttaaagtta 21745774  T
Q  124 aaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||    
T  21745773 aaacatcgtcgctaaaacgacccttcagttcatcaatgttatcaacaatctttttgtgcagatc 21745710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 21704984 - 21704827
Alignment:
Q  24 tccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagtta 123  Q
    ||||||||||| | ||||||||||||||||| |||||| ||||| ||||||||||| || ||||   ||||||||| |||||| || ||||||| |||||    
T  21704984 tccaagatatggagcaaagaacatccatccatgaacaatatccacgacagcttttcatcaaggcactcaaagccttgaagagagtttccggttagagtta 21704885  T
Q  124 aaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtg 181  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  21704884 aaacatcatcgctaaaacgacccttcagttcatcaatgttatctgcaatctttttgtg 21704827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 21664442 - 21664276
Alignment:
Q  24 tccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaagtta 123  Q
    ||||||||||  | |||||| ||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21664442 tccaagatataaagcaaagagcatccatccacgaacaatatccacgacagcttttcttcaaggcttccaaagccttcaagagacttgccggttaaagtta 21664343  T
Q  124 aa---acatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatc 187  Q
    ||   |||||||||  ||||||||||||||| ||||| ||||||||   |||||||||||| |||||    
T  21664342 aaattacatcatcgtcaaaatgacccttcagttcatcgatgttatcaaaaatctttttgtgtagatc 21664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 21689757 - 21689566
Alignment:
Q  21 ttctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaag 120  Q
    |||||||||||||  | |||||| ||||||||||| ||||||||||| || ||||||||||| || ||| |||||||||| ||||| || ||||| || |    
T  21689757 ttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttccggtcaatg 21689658  T
Q  121 ttaaaacatcatcgctaaaatgacccttcagatcatcaatgttatcggcaatctttttgtgcagatctttctgaatgctttcagtgtttttg 212  Q
    |||||||||| ||   ||||||||||||||| | ||||||||||||  |||| |||||||| |||||  ||||||||||| |||||||||||    
T  21689657 ttaaaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttg 21689566  T

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Target: scaffold0182 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 25718 - 25588
Alignment:
Q  20 attctccaagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttcaagagacttgccggttaaa 119  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||    ||||||    
T  25718 attctccaagatatgtagcaaagaacatccatccacgaacaacatcaacgacagcttttcttcaagggtaccaaagccttcaagagactttttagttaaa 25619  T
Q  120 gttaaaacatcatcgctaaaatgacccttca 150  Q
    ||||||||||| |||||||||||||||||||    
T  25618 gttaaaacatcctcgctaaaatgacccttca 25588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 18192049 - 18192123
Alignment:
Q  27 aagatatgcaacaaagaacatccatccacgaacaacatccatgacagcttttcttcgaggctaccaaagccttca 101  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| | | || |||||||||||    
T  18192049 aagatacgcaacaaagaacatccatccacaaacaacatccatgatagcttttcttccaagttatcaaagccttca 18192123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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