View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_419 (Length: 209)
Name: NF10049A_low_419
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_419 |
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Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 47094433 - 47094327
Alignment:
| Q |
21 |
taacaactatttcaaatgaacaacaaacatgctcatcactcatctcacctctattcaacaatggcacccaaaacaaaccactcaaacacgttcatcatct |
120 |
Q |
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| T |
47094433 |
taacaactatttcaaatgaacaaaaaacattctcatcactcatctcacctctattcaacaatggcacccaaaacaaaccactcaaacactttcatcatct |
47094334 |
T |
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| Q |
121 |
tcttact |
127 |
Q |
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||||||| |
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| T |
47094333 |
tcttact |
47094327 |
T |
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