View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_426 (Length: 206)
Name: NF10049A_low_426
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_426 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 2727494 - 2727699
Alignment:
| Q |
1 |
actaatctaataagtgcttaattaacctttttattcaaacaaatcataacaactaactcattacttagagaataatttttatgtactatcagtgtaaaac |
100 |
Q |
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| T |
2727494 |
actaatctaataagtgcttaattaacctttttattcaaacaaatcataacaactaactcattacttagagaataatttttatgtactatcagtgtaaaac |
2727593 |
T |
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| Q |
101 |
tttctatagcgtcaaccgatcacaaaccatcacatttgtctgacttttaatttgatataatggaagtcaaacttttacatggtcgaacaattatgatcga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
2727594 |
tttctatagcgtcaaccgatcacaaaccatcacatttgtctgacttttaatttgatataatggaagtcaaacttttacatgatcgaacaattatgatcga |
2727693 |
T |
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| Q |
201 |
ctgaca |
206 |
Q |
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|||||| |
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| T |
2727694 |
ctgaca |
2727699 |
T |
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