View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049A_low_56 (Length: 386)
Name: NF10049A_low_56
Description: NF10049A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049A_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 32096357 - 32096518
Alignment:
| Q |
117 |
aacattaccataacatcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
216 |
Q |
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| T |
32096357 |
aacattaccataacgtcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
32096456 |
T |
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| Q |
217 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096457 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttc |
32096518 |
T |
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