View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10049_low_24 (Length: 272)

Name: NF10049_low_24
Description: NF10049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10049_low_24
NF10049_low_24
[»] chr3 (7 HSPs)
chr3 (20-262)||(30044446-30044688)
chr3 (163-223)||(35273317-35273377)
chr3 (160-232)||(36731121-36731193)
chr3 (129-172)||(7936770-7936813)
chr3 (112-223)||(12214755-12214866)
chr3 (153-247)||(33335538-33335632)
chr3 (162-226)||(18378280-18378344)
[»] scaffold0153 (1 HSPs)
scaffold0153 (20-260)||(24145-24385)
[»] chr4 (8 HSPs)
chr4 (20-266)||(14454548-14454794)
chr4 (20-241)||(42397340-42397561)
chr4 (20-259)||(26892540-26892779)
chr4 (96-226)||(39867561-39867691)
chr4 (95-180)||(28067500-28067585)
chr4 (89-142)||(28708475-28708528)
chr4 (90-180)||(22323117-22323207)
chr4 (162-242)||(7705169-7705249)
[»] chr1 (1 HSPs)
chr1 (20-260)||(7638268-7638508)
[»] chr6 (7 HSPs)
chr6 (24-259)||(18488929-18489164)
chr6 (20-260)||(16478233-16478473)
chr6 (73-180)||(5194838-5194945)
chr6 (112-223)||(2854841-2854952)
chr6 (117-220)||(4103808-4103911)
chr6 (95-223)||(5676205-5676333)
chr6 (163-247)||(8770796-8770880)
[»] chr5 (8 HSPs)
chr5 (20-260)||(21824437-21824677)
chr5 (96-226)||(40633358-40633488)
chr5 (112-223)||(17696761-17696872)
chr5 (96-226)||(26398002-26398132)
chr5 (112-223)||(17946602-17946713)
chr5 (114-241)||(37267540-37267667)
chr5 (82-180)||(33650561-33650659)
chr5 (90-179)||(20252214-20252303)
[»] chr8 (4 HSPs)
chr8 (20-259)||(39919942-39920181)
chr8 (112-220)||(21313037-21313145)
chr8 (153-184)||(18009010-18009041)
chr8 (118-179)||(8305347-8305408)
[»] chr7 (10 HSPs)
chr7 (91-180)||(22359392-22359481)
chr7 (108-180)||(644301-644373)
chr7 (96-223)||(6458335-6458462)
chr7 (89-220)||(32216284-32216415)
chr7 (117-223)||(38650532-38650638)
chr7 (107-174)||(41242887-41242954)
chr7 (114-180)||(13781484-13781550)
chr7 (158-223)||(47801262-47801327)
chr7 (136-232)||(31396000-31396096)
chr7 (158-242)||(48778314-48778398)
[»] chr2 (6 HSPs)
chr2 (73-188)||(15139964-15140079)
chr2 (114-174)||(22859358-22859418)
chr2 (90-174)||(30516483-30516567)
chr2 (153-188)||(18697435-18697470)
chr2 (113-184)||(26679761-26679832)
chr2 (96-223)||(45468861-45468988)
[»] scaffold0116 (2 HSPs)
scaffold0116 (112-180)||(42919-42987)
scaffold0116 (112-180)||(46839-46907)
[»] scaffold0155 (1 HSPs)
scaffold0155 (96-226)||(32313-32443)


Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 30044688 - 30044446
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30044688 ggaaggaacacatttatgccacacatcaagacctgcaacaacagtcacctgaacctccatattggttaagaaacaataagtccccttaaccgtataacca 30044589  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30044588 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaacaaattgacacaatccctcacgccttcctcctccc 30044489  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccaccaac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30044488 aagcaaataaacggcgcctccactcccaaccacctccaccaac 30044446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 35273317 - 35273377
Alignment:
Q  163 cctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagc 223  Q
    |||||||||||||||||||||||||    ||||| |||||||||| |||||||||||||||    
T  35273317 cctgcaaaacaatgttatgtaataatactacacactccctcacgctttcctcctcccaagc 35273377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 36731121 - 36731193
Alignment:
Q  160 tatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacg 232  Q
    ||||||||||||||||||| |||||||||     ||| |||||||| || |||||||||||||| ||||||||    
T  36731121 tatcctgcaaaacaatgttctgtaataaaacagaacactccctcacaccctcctcctcccaagctaataaacg 36731193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 7936813 - 7936770
Alignment:
Q  129 tcaagtaaccacctccactggtcctgaatattatcctgcaaaac 172  Q
    |||||||||||||||||  || ||||||||||||||||||||||    
T  7936813 tcaagtaaccacctccaacggacctgaatattatcctgcaaaac 7936770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 12214866 - 12214755
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttc 211  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | | |||||||||| || ||  | |||| ||| ||| |||||||  |  ||    
T  12214866 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacgtgcaaaacaacgtcatcgagtaaagtgatacactccctcatactctc 12214767  T
Q  212 ctcctcccaagc 223  Q
    ||||||||||||    
T  12214766 ctcctcccaagc 12214755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 33335538 - 33335632
Alignment:
Q  153 tgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacggcgcctccactccca 247  Q
    |||| |||||||||||| |||||||||||||||||| ||   || ||||||||||  |||||||| || ||||| | ||| || |||||| ||||    
T  33335538 tgaacattatcctgcaagacaatgttatgtaataaaatggagcactccctcacgcgctcctcctctcacgcaaacagacgacgtctccacaccca 33335632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 18378280 - 18378344
Alignment:
Q  162 tcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaa 226  Q
    ||||||||| ||||||||||||| ||    ||||| |||||||| || |||||||||||||||||    
T  18378280 tcctgcaaagcaatgttatgtaacaagacaacacactccctcacaccctcctcctcccaagcaaa 18378344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 260
Target Start/End: Complemental strand, 24385 - 24145
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||||||||||| | |||||||||||| || || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  24385 ggaaggaacacatttatgctatacatcaagaccttcaacatcagtcacctgaacctccttattggttaagaaacaataagtccccttaaccgtataacca 24286  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24285 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaacaaattgacacaatccctcacgccttcctcctccc 24186  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacca 260  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24185 aagcaaataaacggcgcctccactcccaaccacctccacca 24145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 266
Target Start/End: Original strand, 14454548 - 14454794
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    |||||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  14454548 ggaaggaacacatttatgccacacatcaagacctacagcatcagtcaccggaacctccgtattcgttaagaaacaataagtccccttaaccgtataacca 14454647  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  14454648 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaacaagttgacacaatccctcacgccttcctcctccc 14454747  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccaccaacgtcc 266  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  14454748 aagcaaataaacggcgtctccactcccaaccacctccaccagcgtcc 14454794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 42397340 - 42397561
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||  ||||||||||||||||||||||||  ||  ||| ||||||||| ||||||| ||||| ||||| |||| ||||||||||||||| |||    
T  42397340 ggaaggaacaagtttatgccacacatcaagacctgcgccactagttacctgaaccgccatattagttaagaaacagtaagaccccttaaccgtatagcca 42397439  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||| |||||||||||||    
T  42397440 tgaataggatcgagtaaccaccgccactgatcctgaatattatcctgcaaaacaatgttatttaacagattgacacactccctcacaccttcctcctccc 42397539  T
Q  220 aagcaaataaacggcgcctcca 241  Q
    ||||||||||||| || |||||    
T  42397540 aagcaaataaacgacgtctcca 42397561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 26892779 - 26892540
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||||||||||||||||||||| || |||  ||  ||| |||||| || ||||||| ||||| |||||||||||||||||||| |||||  ||    
T  26892779 ggaaggaacacatttatgccacacatcaaaacatgcgccattagttacctgacccgccatattagttaagaaacaataagtccccttaactgtatagtca 26892680  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
     ||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||| | |||||||||||||    
T  26892679 agaataggatcaagtaaccaccgccacttatcctgaatattatcctgcaaaacgatgttatttaacaaattgacacactccctcgcaccttcctcctccc 26892580  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacc 259  Q
    | || |||||||| ||||||||| ||||||||||||||||    
T  26892579 aggccaataaacgacgcctccacacccaaccacctccacc 26892540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 39867691 - 39867561
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    ||||||||  |||||| ||| ||||||||||||||||| ||||| | ||| | |||||| | |||||||||||||| ||||||||  |||||||| ||||    
T  39867691 taagtcccactaaccgaatatccatgaataggatcaagcaaccaacgccagttgtcctgtaaattatcctgcaaaataatgttattcaataaattcacac 39867592  T
Q  196 aatccctcacgccttcctcctcccaagcaaa 226  Q
    | |||||||| |  |||||||||||||||||    
T  39867591 actccctcacactatcctcctcccaagcaaa 39867561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 28067585 - 28067500
Alignment:
Q  95 ataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    ||||| |||||| ||||| ||||| ||||| |||||||| ||||||| |||||| || ||  |||||||||||||||||| |||||    
T  28067585 ataagcccccttcaccgtgtaaccgtgaatcggatcaagcaaccaccgccactgatcttgggtattatcctgcaaaacaaagttat 28067500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 28708528 - 28708475
Alignment:
Q  89 aaaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacct 142  Q
    ||||| ||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  28708528 aaaacgataagtccccttaaccgtatatccgtgaatcggatcaagcaaccacct 28708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 22323117 - 22323207
Alignment:
Q  90 aaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    |||| |||||||||  |||||  ||| ||||||||  ||||||| ||||||| ||| |||||||||||  | ||||||||||||| |||||    
T  22323117 aaacgataagtcccactaacctaatagccatgaatcagatcaagcaaccaccgccaatggtcctgaatgctttcctgcaaaacaacgttat 22323207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 7705169 - 7705249
Alignment:
Q  162 tcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacggcgcctccac 242  Q
    |||| ||||||||||||||||| ||| |  | ||| |||||||| || ||||||||||| || |||||||| |||| ||||    
T  7705169 tccttcaaaacaatgttatgtagtaactcaaaacactccctcactccctcctcctcccacgccaataaacgtcgccgccac 7705249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 7638268 - 7638508
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7638268 ggaaggaacacaattatgccacacatcaagagctgcatcaccagttacctgaacctccataatggttaagaaacaataagtccccttaaccgtataacca 7638367  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| || ||||||||||    
T  7638368 tgaataggatcaagtaaccacctccactggtcatgaatattatcctgcaaaacaatgttacgtaacaaattgacacaatccctcactccatcctcctccc 7638467  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacca 260  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  7638468 aagcaaataaacgatgcctccacacccaaccacctccacca 7638508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 24 - 259
Target Start/End: Complemental strand, 18489164 - 18488929
Alignment:
Q  24 ggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataaccatgaa 123  Q
    |||||||||||||||||||||||||||||| || || |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18489164 ggaacacatttatgccacacatcaagacctacaccaccagttacctgaacctccatattagttaagaaacaataagtccccttaaccgtataaccatgaa 18489065  T
Q  124 taggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagc 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||    
T  18489064 taggatcgagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaacaaattgacacagtccctcacaccatcctcctcccaagc 18488965  T
Q  224 aaataaacggcgcctccactcccaaccacctccacc 259  Q
    ||||||||| ||||||||| ||||||||||||||||    
T  18488964 aaataaacgacgcctccacacccaaccacctccacc 18488929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 16478233 - 16478473
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||    
T  16478233 ggaaggaacacatttatcccacacatcaagacatgcatcactagttacctgaacctccatattagttaagaaacaataagtccccttaaccttttaacca 16478332  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||    
T  16478333 tgaataggatcaagtaaccacctccactggtcctgaatactatcctgcaaaacaatgttatgtaacaaattgacacattccctcacaccatcctcctccc 16478432  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacca 260  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  16478433 aagcaaataaacgacgcctccacacccaaccacctccacca 16478473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 5194945 - 5194838
Alignment:
Q  73 cctccatattggttaaaaaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaac 172  Q
    |||| ||| ||||||  |||| ||||||||| || |||||||| |||||||| |||||||||||||||| ||||||||||||| | || |||||||||||    
T  5194945 cctctatagtggttaggaaacgataagtcccattgaccgtatagccatgaattggatcaagtaaccaccgccactggtcctgattgttttcctgcaaaac 5194846  T
Q  173 aatgttat 180  Q
    || |||||    
T  5194845 aacgttat 5194838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 2854841 - 2854952
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttc 211  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | |||||||||||| |||||  | |||| ||| ||| |||||||  |  ||    
T  2854841 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaacgttatccagtaaagtgatacactccctcatactctc 2854940  T
Q  212 ctcctcccaagc 223  Q
    ||||||||||||    
T  2854941 ctcctcccaagc 2854952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 4103808 - 4103911
Alignment:
Q  117 ccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcct 216  Q
    ||||| || |||||||||||||| | ||| |||||||| | ||| |||||||||  || |||||  |||||||| ||||| |||||||| || |||||||    
T  4103808 ccatgtatcggatcaagtaaccaacgccagtggtcctgtaaattttcctgcaaagtaacgttattcaataaattcacacactccctcactccatcctcct 4103907  T
Q  217 ccca 220  Q
    ||||    
T  4103908 ccca 4103911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 5676205 - 5676333
Alignment:
Q  95 ataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgaca 194  Q
    |||||||||  ||||||  || ||||||||||||||||| ||||| | | | |||| ||| | ||| ||||||| || || ||||   |||||||| |||    
T  5676205 ataagtcccactaaccgagtagccatgaataggatcaagcaaccaacgctagtggttctgtaaattttcctgcagaataacgttagtcaataaattcaca 5676304  T
Q  195 caatccctcacgccttcctcctcccaagc 223  Q
    || |||||||| |  ||||||||||||||    
T  5676305 cactccctcacactatcctcctcccaagc 5676333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 8770880 - 8770796
Alignment:
Q  163 cctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacggcgcctccactccca 247  Q
    |||||||||||||||||||||||| ||||   || |||||||| |  ||||||||||| || || || || || |||||||||||    
T  8770880 cctgcaaaacaatgttatgtaatacattggagcactccctcacactctcctcctcccaggctaacaagcgacgtctccactccca 8770796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 260
Target Start/End: Complemental strand, 21824677 - 21824437
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||    
T  21824677 ggaaggaacacatttatcccacacatcaagacatgcatcactagttacctgaacctccatattagttaagaaacaataagtccccttaaccttttaacca 21824578  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||    
T  21824577 tgaataggatcaagtaaccacctccactggtcctgaatactatcctgcaaaacaatgttatgtaacaaattgacacattccctcacaccatcctcctccc 21824478  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacca 260  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  21824477 aagcaaataaacgacgcctccacacccaaccacctccacca 21824437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 40633358 - 40633488
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    ||||||||  |||||| ||| || |||||||||||||| ||||| | ||| | ||||||   |||| ||||||||| ||||||||| |||||||| ||||    
T  40633358 taagtcccactaaccgaatatccgtgaataggatcaagcaaccaacaccagttgtcctgtgaattaacctgcaaaataatgttatgcaataaattcacac 40633457  T
Q  196 aatccctcacgccttcctcctcccaagcaaa 226  Q
    | |||||||| |  |||||||||||||||||    
T  40633458 actccctcacactatcctcctcccaagcaaa 40633488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 17696761 - 17696872
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttc 211  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | ||||||||||||||||||  | |||| ||| ||| |||||||  |  ||    
T  17696761 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaatgttatccagtaaagtgatacactccctcatactctc 17696860  T
Q  212 ctcctcccaagc 223  Q
    ||||||||||||    
T  17696861 ctcctcccaagc 17696872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 26398002 - 26398132
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    ||||||||  |||||| ||| || |||||||||||||| ||||| | ||| | ||||||   |||| ||||||||| ||||||||  |||||||| ||||    
T  26398002 taagtcccactaaccgaatatccgtgaataggatcaagcaaccaacaccagttgtcctgtgaattaacctgcaaaataatgttattcaataaattcacac 26398101  T
Q  196 aatccctcacgccttcctcctcccaagcaaa 226  Q
    | |||||||| |  |||||||||||||||||    
T  26398102 actccctcacactatcctcctcccaagcaaa 26398132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 17946602 - 17946713
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttc 211  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | |||||||||||| |||||  | |||| ||| ||| |||||||  |  ||    
T  17946602 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaacgttatccagtaaagtgatacactccctcatactctc 17946701  T
Q  212 ctcctcccaagc 223  Q
    ||||||||||||    
T  17946702 ctcctcccaagc 17946713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 241
Target Start/End: Complemental strand, 37267667 - 37267540
Alignment:
Q  114 taaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcct 213  Q
    |||||||||||||||| ||| | ||| | |||  ||||||| | |||||||||||||| || |||||  |||||||| || || |||||||| |  ||||    
T  37267667 taaccatgaataggattaagcacccaacgccaacggtcctgtaaattatcctgcaaaataacgttattcaataaattcacgcactccctcacactatcct 37267568  T
Q  214 cctcccaagcaaataaacggcgcctcca 241  Q
    |||||||||| || || ||||| |||||    
T  37267567 cctcccaagccaacaaccggcgtctcca 37267540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 33650659 - 33650561
Alignment:
Q  82 tggttaaaaaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    |||||| ||||| |||||||||  |||||||| | |||||||  |||||||| ||||||| ||||  ||||||||| || | ||||||||||| |||||    
T  33650659 tggttagaaaacgataagtcccactaaccgtacagccatgaagcggatcaagcaaccaccgccaccagtcctgaatgtttttctgcaaaacaacgttat 33650561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20252214 - 20252303
Alignment:
Q  90 aaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgtta 179  Q
    |||| ||||| |||||| ||||| ||||| ||||  |||||||  ||||||| ||||||||| ||  |||| ||||||||||||||||||    
T  20252214 aaacgataagcccccttcaccgtgtaaccgtgaaccggatcaatcaaccaccgccactggtcttgggtattgtcctgcaaaacaatgtta 20252303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 39919942 - 39920181
Alignment:
Q  20 ggaaggaacacatttatgccacacatcaagacctgcatcaacagtcacctgaacctccatattggttaaaaaacaataagtccccttaaccgtataacca 119  Q
    ||||||||||| | ||||||||||||||| |||| |  ||   || |||||| |||||||||| ||||| || || |||||||||||||| ||||| |||    
T  39919942 ggaaggaacacgtctatgccacacatcaaaacctacgccactggttacctgaccctccatattagttaagaagcagtaagtccccttaactgtatagcca 39920041  T
Q  120 tgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctccc 219  Q
     ||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  39920042 agaatagggtcgagtaaccaccgccacttatcctgaatattatcctgcaaaacaatgttatttaacaaattgacacactccctcacaccttcctcctccc 39920141  T
Q  220 aagcaaataaacggcgcctccactcccaaccacctccacc 259  Q
    | || |||||||| ||||||||| ||||||||||||||||    
T  39920142 aggccaataaacgacgcctccacacccaaccacctccacc 39920181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 21313145 - 21313037
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttc 211  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | |||||||||||| |||||  | |||| ||| ||| |||||||  |  ||    
T  21313145 tataaccatgaacaggatcgagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaacgttatccagtaaagtgatacactccctcaaactctc 21313046  T
Q  212 ctcctccca 220  Q
    |||||||||    
T  21313045 ctcctccca 21313037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 184
Target Start/End: Complemental strand, 18009041 - 18009010
Alignment:
Q  153 tgaatattatcctgcaaaacaatgttatgtaa 184  Q
    ||||||||||||||||||||||||||||||||    
T  18009041 tgaatattatcctgcaaaacaatgttatgtaa 18009010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 8305347 - 8305408
Alignment:
Q  118 catgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgtta 179  Q
    |||||| |||||| |||||||||| |||  |||| ||||||||| |||| ||||||||||||    
T  8305347 catgaacaggatctagtaaccaccgccaacggtcatgaatattaacctgtaaaacaatgtta 8305408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 22359392 - 22359481
Alignment:
Q  91 aacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    ||||||| |||||  |||||||||| |||||||| |||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  22359392 aacaatacgtcccactaaccgtatagccatgaatcggatcaagcaaccaccaccactagtcctgaatattttcctgcaaaacaatgttat 22359481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 644373 - 644301
Alignment:
Q  108 accgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||| |||||    
T  644373 accgtatagccatgaatcggatcaagcaaccaccgccactggtcctgaatgttttcctgcaaaacaacgttat 644301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 6458462 - 6458335
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    ||||||||  ||||||  |||||||||||||||||||  ||||| | ||| ||||| || | ||| | |||||||| || ||||| ||||||||| ||||    
T  6458462 taagtcccactaaccgagtaaccatgaataggatcaaaaaaccaacgccagtggtcttgtaaatttttctgcaaaataacgttatttaataaattcacac 6458363  T
Q  196 aatccctcacgccttcctcctcccaagc 223  Q
    | |||||||| |  ||||||||||||||    
T  6458362 actccctcacactatcctcctcccaagc 6458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 32216284 - 32216415
Alignment:
Q  89 aaaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaa 188  Q
    ||||| ||||||||| | |||  |||| ||||||| |||||| |||||||||| |||  |||||||||||| | ||||||||||||||||||  | ||||    
T  32216284 aaaacgataagtcccatcaacactatatccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaatgttatccagtaaa 32216383  T
Q  189 ttgacacaatccctcacgccttcctcctccca 220  Q
     ||| ||| |||||||  |  |||||||||||    
T  32216384 gtgatacactccctcatactctcctcctccca 32216415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 38650638 - 38650532
Alignment:
Q  117 ccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcct 216  Q
    ||||||| ||||||||||||| ||| ||| ||||||| | ||| | |||||||||||| ||| |  || ||| ||||||| |||||||| |  |||||||    
T  38650638 ccatgaacaggatcaagtaactaccgccaatggtcctcagtatcaacctgcaaaacaacgttttccaacaaagtgacacactccctcacactctcctcct 38650539  T
Q  217 cccaagc 223  Q
    |||||||    
T  38650538 cccaagc 38650532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 41242887 - 41242954
Alignment:
Q  107 aaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaa 174  Q
    |||||| |||||||| ||||||||||| | |||||||||   |||||| |||| ||||||||||||||    
T  41242887 aaccgtgtaaccatgtataggatcaagaagccacctccaaaagtcctgtatatgatcctgcaaaacaa 41242954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 13781484 - 13781550
Alignment:
Q  114 taaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    ||||| ||||||||||| |||||||||||||| | ||| |||||||| | |||||||| || |||||    
T  13781484 taaccttgaataggatctagtaaccacctccagtagtcttgaatatttttctgcaaaataacgttat 13781550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 47801262 - 47801327
Alignment:
Q  158 attatcctgcaaaacaatgttatgtaata-aattgacacaatccctcacgccttcctcctcccaagc 223  Q
    ||||||||||||||||||||||||||||| ||| ||  || |||||||| | |||||||||||||||    
T  47801262 attatcctgcaaaacaatgttatgtaatagaataga-gcattccctcacactttcctcctcccaagc 47801327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 31396000 - 31396096
Alignment:
Q  136 accacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacg 232  Q
    |||||||||||  ||| || | ||| ||||||||||||| ||| || ||||||   ||||| |||||||| |  |||||||||||||| ||||||||    
T  31396000 accacctccacacgtcgtggacattttcctgcaaaacaacgttgtgaaataaaacaacacactccctcacactctcctcctcccaagccaataaacg 31396096  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 48778314 - 48778398
Alignment:
Q  158 attatcctgcaaaacaatgttatgtaataaattgacacaatccctcacgccttcctcctcccaagcaaataaacggcgcctccac 242  Q
    |||| |||||||||||| ||||||||||||  ||  ||| |||| ||| |  ||||||||||||||||| ||||| || ||||||    
T  48778314 attaacctgcaaaacaacgttatgtaataatatggaacactcccgcacacactcctcctcccaagcaaacaaacgacgtctccac 48778398  T

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Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 15140079 - 15139964
Alignment:
Q  73 cctccatattggttaaaaaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaac 172  Q
    |||| ||||||||||  ||||||||||||||  |||||| ||| |||||||| |||||||| || |  | ||| ||||||||||| || |||||||||||    
T  15140079 cctctatattggttaggaaacaataagtcccactaaccgaatagccatgaatgggatcaagcaatcctcgccaatggtcctgaatgttttcctgcaaaac 15139980  T
Q  173 aatgttatgtaataaa 188  Q
    ||||||||||||||||    
T  15139979 aatgttatgtaataaa 15139964  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 22859358 - 22859418
Alignment:
Q  114 taaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaa 174  Q
    |||||||| ||||||||||| ||||||||||| | |||||| |||| ||||||||||||||    
T  22859358 taaccatgtataggatcaagaaaccacctccaatagtcctgcatatgatcctgcaaaacaa 22859418  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 30516483 - 30516567
Alignment:
Q  90 aaacaataagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaa 174  Q
    |||| |||||||||  | |||||||| ||||||||  ||||||| ||||||| ||||||||||||||| |  |||||||||||||    
T  30516483 aaacgataagtcccactgaccgtatagccatgaatcagatcaagcaaccaccaccactggtcctgaatgtattcctgcaaaacaa 30516567  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 18697435 - 18697470
Alignment:
Q  153 tgaatattatcctgcaaaacaatgttatgtaataaa 188  Q
    |||| |||||||||||||||||||||||||||||||    
T  18697435 tgaacattatcctgcaaaacaatgttatgtaataaa 18697470  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 26679832 - 26679761
Alignment:
Q  113 ataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaa 184  Q
    |||||||||||||||||| || | |||| ||||||  || |||| || ||||| ||||||||||||||||||    
T  26679832 ataaccatgaataggatctagcagccacttccacttatcatgaacatgatcctacaaaacaatgttatgtaa 26679761  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 45468861 - 45468988
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    ||||||||  ||||||  || ||||||||||||||||| | ||| | ||| |||||| | | ||| |||||||||| || |||||  |||||||| || |    
T  45468861 taagtcccactaaccgagtagccatgaataggatcaagcacccaacgccagtggtccggtaaattttcctgcaaaataacgttattcaataaattcacgc 45468960  T
Q  196 aatccctcacgccttcctcctcccaagc 223  Q
    | |||||||| |  ||||||||||||||    
T  45468961 actccctcacactatcctcctcccaagc 45468988  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 42919 - 42987
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | |||||||||||| |||||    
T  42919 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaacgttat 42987  T

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Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 46839 - 46907
Alignment:
Q  112 tataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttat 180  Q
    |||||||||||| |||||| |||||||||| |||  |||||||||||| | |||||||||||| |||||    
T  46839 tataaccatgaacaggatctagtaaccaccgccaacggtcctgaatatgaacctgcaaaacaacgttat 46907  T

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Target: scaffold0155 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 32313 - 32443
Alignment:
Q  96 taagtccccttaaccgtataaccatgaataggatcaagtaaccacctccactggtcctgaatattatcctgcaaaacaatgttatgtaataaattgacac 195  Q
    |||||||| ||||||| ||| ||||||||| ||||||| ||||| | ||| | |||||| | ||| |||| ||||| || |||||  ||| |||| || |    
T  32313 taagtcccattaaccgaatatccatgaatatgatcaagcaaccaacgccagttgtcctgtaaattttcctacaaaataacgttattcaattaattcacgc 32412  T
Q  196 aatccctcacgccttcctcctcccaagcaaa 226  Q
    | |||||||| |  |||||||||||||||||    
T  32413 actccctcacactatcctcctcccaagcaaa 32443  T

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