View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10049_low_36 (Length: 245)
Name: NF10049_low_36
Description: NF10049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10049_low_36 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 22348010 - 22347780
Alignment:
| Q |
1 |
gctagttgtataatgaaaggcagatcaatcacactactgtggattagtagggtgacctccgataacagaagaagctctccttctaaagaagggacacaat |
100 |
Q |
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| T |
22348010 |
gctagttgtataatgaaaggcagatcaatcacactactgtggattagtagggtgacctccgataacagaggaagctctccttctaaagaagggacacaat |
22347911 |
T |
|
| Q |
101 |
aatgcaggttaagcggggcgatgcttaaatcctgatttggattagccatactgccagaaggatttccttggaaccactcacatccaacgaatttgtatca |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
22347910 |
aatgcaggttaagcggggcaatgcttaaatcctgatttggattagccatactgccagaaggatttccttggaaccactcacatccaacgaatttgtttca |
22347811 |
T |
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| Q |
201 |
aaacctg-ttataggtattaagatgaatatt |
230 |
Q |
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||||||| ||||||||||||||||||||||| |
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| T |
22347810 |
aaacctgtttataggtattaagatgaatatt |
22347780 |
T |
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