View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10050_6 (Length: 346)
Name: NF10050_6
Description: NF10050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10050_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 30 - 346
Target Start/End: Complemental strand, 44851789 - 44851483
Alignment:
| Q |
30 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacatnnnnnnnnnncacttgaatcaatcaagaaggggcaaca |
129 |
Q |
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| T |
44851789 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacataaaaaa----------aatcaatcaagaaggggcaaca |
44851700 |
T |
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| Q |
130 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851699 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
44851600 |
T |
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| Q |
230 |
tagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851599 |
tagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
44851500 |
T |
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| Q |
330 |
aggatcttcttggtcta |
346 |
Q |
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| T |
44851499 |
aggatcttcttggtcta |
44851483 |
T |
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