View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10051_high_10 (Length: 229)

Name: NF10051_high_10
Description: NF10051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10051_high_10
NF10051_high_10
[»] chr7 (1 HSPs)
chr7 (1-223)||(28272608-28272830)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28272608 - 28272830
Alignment:
1 cttagaatacttttcgacatttaatataatttaaataagtttctcaaatttctttctcacagatcattggtttggaagaagacaacactattttctttca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
28272608 cttagaatacttttcgacatttaatataatttaaataagtttctcaaatttctttctcacagatcattggtttggaagaagacaacactattttctttca 28272707  T
101 cgaaaaaattaggtgatgatgatttacagattcagattttatgacttgatagtgtacacatattaaaagagtttctatcaaacatgtctacttgatgata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
28272708 cgaaaaaattaggtgatgatgatttacagattcagattttatgacttgatagtgtacacatattaaaagagtttctatcaaacatgtctacttgatgata 28272807  T
201 ttgactaattagtaattagtatt 223  Q
    |||||||||||||||||||||||    
28272808 ttgactaattagtaattagtatt 28272830  T

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