View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10051_low_9 (Length: 229)

Name: NF10051_low_9
Description: NF10051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10051_low_9
NF10051_low_9
[»] chr2 (39 HSPs)
chr2 (4-229)||(21245280-21245505)
chr2 (4-225)||(24273262-24273483)
chr2 (14-229)||(28349763-28349977)
chr2 (14-229)||(26904004-26904216)
chr2 (14-229)||(43707282-43707491)
chr2 (14-202)||(24087809-24087996)
chr2 (27-192)||(22703609-22703773)
chr2 (15-215)||(12727984-12728184)
chr2 (104-229)||(20273203-20273328)
chr2 (104-201)||(16935047-16935144)
chr2 (104-201)||(17005707-17005804)
chr2 (15-215)||(34824043-34824243)
chr2 (14-192)||(6477474-6477650)
chr2 (15-192)||(12636326-12636503)
chr2 (15-192)||(42178419-42178596)
chr2 (15-219)||(11231800-11232004)
chr2 (15-219)||(22513647-22513851)
chr2 (105-217)||(22283549-22283661)
chr2 (34-225)||(22775650-22775841)
chr2 (34-225)||(22781028-22781219)
chr2 (34-192)||(12642119-12642277)
chr2 (15-213)||(24686243-24686441)
chr2 (15-213)||(28776269-28776467)
chr2 (34-192)||(3799080-3799238)
chr2 (27-192)||(19358519-19358687)
chr2 (104-195)||(34877458-34877549)
chr2 (104-192)||(19659508-19659596)
chr2 (15-192)||(8943467-8943644)
chr2 (106-192)||(27366880-27366966)
chr2 (105-225)||(22274307-22274428)
chr2 (138-192)||(21274788-21274842)
chr2 (104-192)||(23822260-23822348)
chr2 (104-192)||(23831339-23831427)
chr2 (156-200)||(24383291-24383335)
chr2 (104-192)||(36891382-36891470)
chr2 (140-200)||(34897302-34897362)
chr2 (110-192)||(9653597-9653679)
chr2 (137-202)||(45617970-45618035)
chr2 (104-152)||(24383327-24383375)
[»] chr8 (41 HSPs)
chr8 (4-229)||(32950498-32950724)
chr8 (27-229)||(22532386-22532588)
chr8 (27-229)||(22537071-22537273)
chr8 (14-225)||(39694519-39694730)
chr8 (7-229)||(39364369-39364592)
chr8 (51-229)||(17501770-17501948)
chr8 (14-192)||(23451104-23451284)
chr8 (14-225)||(44522418-44522629)
chr8 (14-202)||(17611528-17611715)
chr8 (51-229)||(4233486-4233664)
chr8 (15-229)||(13662726-13662940)
chr8 (14-192)||(34302182-34302361)
chr8 (14-190)||(24496237-24496415)
chr8 (14-189)||(3273523-3273700)
chr8 (27-170)||(24979771-24979913)
chr8 (14-188)||(22583897-22584070)
chr8 (15-192)||(13721386-13721563)
chr8 (51-229)||(22006758-22006936)
chr8 (63-225)||(39114701-39114862)
chr8 (15-219)||(643894-644098)
chr8 (14-192)||(26220184-26220362)
chr8 (14-192)||(23889438-23889614)
chr8 (104-192)||(26222613-26222701)
chr8 (34-192)||(16873528-16873686)
chr8 (15-213)||(15319621-15319819)
chr8 (15-213)||(15499990-15500188)
chr8 (107-213)||(271915-272021)
chr8 (107-213)||(829634-829740)
chr8 (105-225)||(24717415-24717536)
chr8 (105-192)||(3431830-3431917)
chr8 (124-192)||(20481064-20481132)
chr8 (138-192)||(273901-273955)
chr8 (138-192)||(641894-641948)
chr8 (138-192)||(827700-827754)
chr8 (106-192)||(30766240-30766326)
chr8 (110-192)||(5080848-5080930)
chr8 (110-192)||(16039593-16039675)
chr8 (138-192)||(24386484-24386538)
chr8 (114-195)||(23809452-23809533)
chr8 (139-201)||(24239270-24239332)
chr8 (112-180)||(24624449-24624517)
[»] chr3 (64 HSPs)
chr3 (4-229)||(18366742-18366965)
chr3 (5-229)||(178711-178935)
chr3 (4-229)||(3393982-3394208)
chr3 (14-225)||(13029400-13029610)
chr3 (14-225)||(13025808-13026018)
chr3 (8-225)||(12276399-12276615)
chr3 (14-229)||(37038644-37038859)
chr3 (14-219)||(42324213-42324417)
chr3 (14-228)||(9511158-9511372)
chr3 (14-228)||(9519133-9519347)
chr3 (14-229)||(17513425-17513640)
chr3 (21-229)||(50351068-50351276)
chr3 (4-192)||(14818717-14818905)
chr3 (14-185)||(24340184-24340354)
chr3 (18-192)||(29172095-29172268)
chr3 (14-202)||(12536275-12536463)
chr3 (104-225)||(28557633-28557754)
chr3 (14-192)||(37641736-37641914)
chr3 (15-225)||(54038740-54038950)
chr3 (14-202)||(15517277-15517464)
chr3 (21-213)||(30206837-30207029)
chr3 (37-192)||(34851562-34851717)
chr3 (14-192)||(52338192-52338369)
chr3 (14-192)||(12158915-12159096)
chr3 (14-192)||(13511698-13511878)
chr3 (15-192)||(18910614-18910791)
chr3 (104-202)||(20188350-20188448)
chr3 (14-192)||(45530844-45531024)
chr3 (105-202)||(23395344-23395441)
chr3 (4-163)||(52212659-52212818)
chr3 (15-229)||(16820721-16820935)
chr3 (14-192)||(36167163-36167341)
chr3 (15-201)||(40039355-40039541)
chr3 (14-202)||(17547709-17547895)
chr3 (15-219)||(1468201-1468405)
chr3 (34-201)||(16934462-16934629)
chr3 (34-217)||(49232029-49232212)
chr3 (129-229)||(11192913-11193013)
chr3 (34-201)||(17956463-17956630)
chr3 (104-192)||(21619014-21619102)
chr3 (37-192)||(22147021-22147176)
chr3 (14-202)||(11849835-11850020)
chr3 (104-192)||(8604470-8604558)
chr3 (104-202)||(38167362-38167460)
chr3 (110-192)||(53770501-53770583)
chr3 (136-225)||(19568546-19568634)
chr3 (93-200)||(17758767-17758874)
chr3 (93-200)||(19060087-19060194)
chr3 (106-192)||(13968129-13968215)
chr3 (106-192)||(13973604-13973690)
chr3 (109-198)||(19430547-19430636)
chr3 (104-192)||(11061707-11061795)
chr3 (104-192)||(17100113-17100201)
chr3 (14-192)||(10550936-10551114)
chr3 (138-213)||(12808849-12808924)
chr3 (14-151)||(13667324-13667460)
chr3 (110-192)||(11882755-11882837)
chr3 (110-192)||(13327077-13327159)
chr3 (139-192)||(2843654-2843707)
chr3 (115-192)||(3992013-3992090)
chr3 (124-192)||(20417791-20417859)
chr3 (145-192)||(51961708-51961755)
chr3 (138-192)||(16260922-16260976)
chr3 (104-202)||(23491825-23491923)
[»] chr7 (49 HSPs)
chr7 (4-219)||(40554745-40554959)
chr7 (5-219)||(8756378-8756591)
chr7 (14-229)||(13898071-13898285)
chr7 (14-219)||(13698880-13699085)
chr7 (21-229)||(28720294-28720503)
chr7 (27-219)||(33001770-33001960)
chr7 (14-229)||(29004667-29004881)
chr7 (7-229)||(48744128-48744351)
chr7 (4-192)||(3288990-3289176)
chr7 (14-192)||(11054344-11054523)
chr7 (14-192)||(19486204-19486382)
chr7 (104-202)||(17467713-17467811)
chr7 (104-202)||(17585403-17585501)
chr7 (14-202)||(13256316-13256503)
chr7 (105-225)||(32494754-32494874)
chr7 (15-219)||(7822318-7822522)
chr7 (15-219)||(7829629-7829833)
chr7 (15-219)||(27102099-27102303)
chr7 (15-219)||(27109447-27109651)
chr7 (15-219)||(27176023-27176227)
chr7 (15-219)||(38784191-38784395)
chr7 (105-192)||(370708-370795)
chr7 (34-192)||(13757991-13758149)
chr7 (15-229)||(15951249-15951463)
chr7 (51-201)||(16383369-16383519)
chr7 (51-192)||(14251392-14251533)
chr7 (104-202)||(37380504-37380602)
chr7 (106-192)||(21734752-21734838)
chr7 (104-192)||(37784686-37784774)
chr7 (105-192)||(10063210-10063297)
chr7 (14-192)||(48274115-48274293)
chr7 (106-176)||(21734192-21734262)
chr7 (105-192)||(15927188-15927276)
chr7 (110-192)||(2190888-2190970)
chr7 (104-202)||(3049038-3049136)
chr7 (106-192)||(4280757-4280843)
chr7 (51-192)||(18980514-18980655)
chr7 (115-202)||(13866472-13866559)
chr7 (105-195)||(3170749-3170839)
chr7 (167-229)||(13408597-13408659)
chr7 (110-192)||(15525278-15525360)
chr7 (110-192)||(42057002-42057084)
chr7 (139-192)||(3894497-3894550)
chr7 (139-192)||(2028382-2028435)
chr7 (104-192)||(26070962-26071050)
chr7 (104-192)||(26094749-26094837)
chr7 (145-192)||(25123918-25123965)
chr7 (139-192)||(112008-112061)
chr7 (14-79)||(10063143-10063208)
[»] chr6 (45 HSPs)
chr6 (7-229)||(29847509-29847730)
chr6 (4-229)||(16132653-16132877)
chr6 (5-229)||(18659032-18659256)
chr6 (14-229)||(19443274-19443488)
chr6 (27-225)||(25753038-25753236)
chr6 (27-225)||(25755208-25755406)
chr6 (14-227)||(20177593-20177806)
chr6 (14-227)||(22158185-22158398)
chr6 (4-219)||(28948179-28948394)
chr6 (7-229)||(25347952-25348175)
chr6 (14-202)||(24267469-24267656)
chr6 (14-202)||(29415794-29415983)
chr6 (14-192)||(5109952-5110129)
chr6 (14-177)||(24441308-24441470)
chr6 (37-219)||(19174776-19174957)
chr6 (14-202)||(5289316-5289498)
chr6 (14-192)||(13750516-13750692)
chr6 (36-225)||(16135893-16136082)
chr6 (37-192)||(18259436-18259591)
chr6 (15-192)||(16231513-16231690)
chr6 (15-219)||(10488289-10488493)
chr6 (15-219)||(16376835-16377039)
chr6 (15-219)||(16384159-16384363)
chr6 (15-213)||(16649833-16650031)
chr6 (15-213)||(25904741-25904939)
chr6 (27-192)||(8226984-8227148)
chr6 (51-192)||(18087316-18087457)
chr6 (107-213)||(33314761-33314867)
chr6 (15-225)||(19983751-19983962)
chr6 (15-213)||(16556603-16556801)
chr6 (15-213)||(16633159-16633357)
chr6 (34-192)||(23977390-23977548)
chr6 (15-228)||(35015617-35015831)
chr6 (107-213)||(22226293-22226399)
chr6 (14-151)||(31468017-31468154)
chr6 (107-192)||(23532219-23532304)
chr6 (14-192)||(16448014-16448192)
chr6 (110-192)||(23994383-23994465)
chr6 (106-192)||(24563076-24563162)
chr6 (110-192)||(18003206-18003288)
chr6 (138-188)||(13621374-13621424)
chr6 (104-192)||(18776616-18776704)
chr6 (124-192)||(25650695-25650763)
chr6 (173-224)||(19168514-19168565)
chr6 (27-83)||(19102735-19102791)
[»] scaffold0126 (1 HSPs)
scaffold0126 (5-227)||(6647-6867)
[»] scaffold0123 (2 HSPs)
scaffold0123 (14-229)||(6871-7086)
scaffold0123 (37-192)||(1530-1684)
[»] scaffold0042 (1 HSPs)
scaffold0042 (14-229)||(51804-52018)
[»] scaffold0447 (4 HSPs)
scaffold0447 (7-229)||(7449-7670)
scaffold0447 (7-229)||(12063-12284)
scaffold0447 (104-202)||(4018-4116)
scaffold0447 (104-202)||(8632-8730)
[»] scaffold0383 (2 HSPs)
scaffold0383 (7-229)||(10058-10279)
scaffold0383 (104-202)||(6626-6724)
[»] chr4 (43 HSPs)
chr4 (7-218)||(10705341-10705551)
chr4 (7-218)||(10919111-10919321)
chr4 (14-225)||(15990868-15991078)
chr4 (14-229)||(9870687-9870902)
chr4 (74-224)||(15214108-15214258)
chr4 (14-176)||(14931364-14931525)
chr4 (14-229)||(3337966-3338182)
chr4 (15-201)||(5682987-5683173)
chr4 (4-192)||(4830389-4830575)
chr4 (4-192)||(4833684-4833870)
chr4 (4-202)||(2584376-2584572)
chr4 (14-176)||(6512273-6512434)
chr4 (12-185)||(15368171-15368343)
chr4 (63-227)||(45314379-45314542)
chr4 (107-225)||(18293412-18293531)
chr4 (36-201)||(54363742-54363907)
chr4 (14-185)||(16224020-16224190)
chr4 (15-229)||(18168552-18168766)
chr4 (51-192)||(7132559-7132700)
chr4 (14-192)||(14280882-14281060)
chr4 (14-185)||(15373972-15374142)
chr4 (34-192)||(20000344-20000502)
chr4 (14-192)||(20898987-20899164)
chr4 (37-202)||(13447154-13447319)
chr4 (104-192)||(4615381-4615469)
chr4 (107-225)||(25119760-25119879)
chr4 (27-176)||(22354328-22354476)
chr4 (37-192)||(27028383-27028535)
chr4 (14-202)||(18230364-18230551)
chr4 (104-192)||(54798236-54798324)
chr4 (14-152)||(15371712-15371850)
chr4 (106-192)||(16157429-16157515)
chr4 (105-185)||(15403184-15403263)
chr4 (104-192)||(30233215-30233303)
chr4 (112-192)||(26921804-26921884)
chr4 (104-192)||(52266227-52266315)
chr4 (40-201)||(19622549-19622711)
chr4 (104-200)||(13043296-13043392)
chr4 (34-201)||(17375738-17375906)
chr4 (105-188)||(15852063-15852146)
chr4 (155-192)||(8574316-8574353)
chr4 (37-82)||(16157538-16157583)
chr4 (156-192)||(15273059-15273095)
[»] chr1 (27 HSPs)
chr1 (5-229)||(21659969-21660192)
chr1 (17-227)||(51324102-51324312)
chr1 (14-229)||(21239286-21239501)
chr1 (14-229)||(20030882-20031097)
chr1 (14-188)||(52983863-52984037)
chr1 (27-202)||(18270948-18271122)
chr1 (27-202)||(18275602-18275776)
chr1 (14-185)||(21473432-21473602)
chr1 (14-192)||(18824253-18824430)
chr1 (14-192)||(7320835-7321012)
chr1 (51-229)||(39060940-39061118)
chr1 (119-229)||(7791949-7792059)
chr1 (105-229)||(21858872-21858997)
chr1 (14-192)||(13527952-13528128)
chr1 (14-192)||(51476624-51476803)
chr1 (37-228)||(16656243-16656435)
chr1 (107-219)||(17004227-17004339)
chr1 (14-154)||(7791798-7791938)
chr1 (105-202)||(20058107-20058204)
chr1 (15-219)||(38055552-38055756)
chr1 (105-225)||(44035523-44035644)
chr1 (15-201)||(18060220-18060406)
chr1 (51-192)||(17148189-17148330)
chr1 (110-192)||(20825463-20825545)
chr1 (139-192)||(35054241-35054294)
chr1 (105-201)||(21650592-21650688)
chr1 (104-192)||(27330450-27330538)
[»] scaffold0825 (1 HSPs)
scaffold0825 (14-229)||(626-841)
[»] scaffold0083 (3 HSPs)
scaffold0083 (14-229)||(10995-11211)
scaffold0083 (14-229)||(5277-5492)
scaffold0083 (42-229)||(1-188)
[»] scaffold0181 (1 HSPs)
scaffold0181 (8-192)||(25752-25936)
[»] chr5 (32 HSPs)
chr5 (14-227)||(22470428-22470640)
chr5 (14-192)||(8952278-8952455)
chr5 (93-229)||(20197656-20197792)
chr5 (27-202)||(22777320-22777494)
chr5 (14-192)||(21311139-21311317)
chr5 (14-192)||(21297596-21297774)
chr5 (15-229)||(10778428-10778642)
chr5 (35-229)||(21399063-21399257)
chr5 (105-229)||(1220070-1220194)
chr5 (4-188)||(23539404-23539586)
chr5 (14-202)||(22357141-22357327)
chr5 (37-228)||(28901796-28901988)
chr5 (37-228)||(28938191-28938383)
chr5 (27-192)||(40726324-40726488)
chr5 (15-219)||(21932843-21933047)
chr5 (15-219)||(21939013-21939217)
chr5 (105-192)||(9730932-9731019)
chr5 (14-192)||(10817444-10817621)
chr5 (15-213)||(22883546-22883744)
chr5 (107-213)||(35581631-35581737)
chr5 (107-213)||(36990325-36990431)
chr5 (107-192)||(18318537-18318622)
chr5 (104-192)||(20765583-20765671)
chr5 (106-192)||(22007217-22007303)
chr5 (110-192)||(21204388-21204470)
chr5 (105-183)||(23514187-23514265)
chr5 (14-79)||(21405870-21405935)
chr5 (105-170)||(21405937-21406002)
chr5 (104-192)||(21109356-21109444)
chr5 (104-192)||(20711538-20711626)
chr5 (139-192)||(21650160-21650213)
chr5 (110-192)||(22111605-22111687)
[»] scaffold0113 (1 HSPs)
scaffold0113 (27-228)||(35087-35288)
[»] scaffold0962 (1 HSPs)
scaffold0962 (4-192)||(843-1031)
[»] scaffold0273 (1 HSPs)
scaffold0273 (4-192)||(7312-7500)
[»] scaffold0117 (2 HSPs)
scaffold0117 (4-202)||(25757-25955)
scaffold0117 (27-192)||(40464-40629)
[»] scaffold0453 (1 HSPs)
scaffold0453 (4-192)||(3749-3937)
[»] scaffold0429 (1 HSPs)
scaffold0429 (4-192)||(2227-2415)
[»] scaffold0521 (1 HSPs)
scaffold0521 (35-219)||(8361-8545)
[»] scaffold0377 (1 HSPs)
scaffold0377 (14-192)||(16340-16519)
[»] scaffold0125 (1 HSPs)
scaffold0125 (35-229)||(28145-28339)
[»] scaffold0106 (1 HSPs)
scaffold0106 (27-229)||(21579-21781)
[»] scaffold0080 (2 HSPs)
scaffold0080 (14-229)||(29578-29793)
scaffold0080 (14-229)||(35043-35258)
[»] scaffold0149 (1 HSPs)
scaffold0149 (14-192)||(35781-35958)
[»] scaffold0021 (2 HSPs)
scaffold0021 (4-192)||(147257-147443)
scaffold0021 (104-192)||(87757-87845)
[»] scaffold0256 (1 HSPs)
scaffold0256 (14-206)||(2085-2277)
[»] scaffold0004 (4 HSPs)
scaffold0004 (37-202)||(60051-60216)
scaffold0004 (14-202)||(75414-75602)
scaffold0004 (14-202)||(72564-72755)
scaffold0004 (146-192)||(187612-187658)
[»] scaffold0269 (1 HSPs)
scaffold0269 (105-225)||(16044-16164)
[»] scaffold0039 (1 HSPs)
scaffold0039 (105-225)||(19609-19729)
[»] scaffold2046 (1 HSPs)
scaffold2046 (14-192)||(824-1000)
[»] scaffold0686 (1 HSPs)
scaffold0686 (106-225)||(6635-6754)
[»] scaffold0175 (2 HSPs)
scaffold0175 (14-192)||(18481-18658)
scaffold0175 (138-192)||(14414-14468)
[»] scaffold0017 (3 HSPs)
scaffold0017 (104-219)||(26347-26462)
scaffold0017 (14-192)||(751-931)
scaffold0017 (104-192)||(7593-7681)
[»] scaffold0371 (1 HSPs)
scaffold0371 (14-192)||(3510-3690)
[»] scaffold0452 (1 HSPs)
scaffold0452 (53-224)||(3253-3424)
[»] scaffold0720 (1 HSPs)
scaffold0720 (14-192)||(682-859)
[»] scaffold0037 (4 HSPs)
scaffold0037 (14-192)||(113209-113387)
scaffold0037 (27-192)||(118056-118221)
scaffold0037 (139-192)||(25433-25486)
scaffold0037 (110-202)||(94426-94518)
[»] scaffold0034 (3 HSPs)
scaffold0034 (15-229)||(79284-79498)
scaffold0034 (105-217)||(40118-40230)
scaffold0034 (105-217)||(45601-45713)
[»] scaffold0342 (2 HSPs)
scaffold0342 (105-213)||(1000-1108)
scaffold0342 (115-202)||(5392-5479)
[»] scaffold0016 (1 HSPs)
scaffold0016 (105-229)||(166794-166917)
[»] scaffold0107 (2 HSPs)
scaffold0107 (14-192)||(3526-3703)
scaffold0107 (15-213)||(30905-31103)
[»] scaffold0023 (1 HSPs)
scaffold0023 (15-229)||(154468-154682)
[»] scaffold0331 (1 HSPs)
scaffold0331 (14-192)||(4340-4514)
[»] scaffold0076 (1 HSPs)
scaffold0076 (15-219)||(38693-38897)
[»] scaffold0409 (2 HSPs)
scaffold0409 (34-225)||(1788-1978)
scaffold0409 (34-225)||(10043-10233)
[»] scaffold0247 (1 HSPs)
scaffold0247 (37-185)||(17511-17658)
[»] scaffold0184 (1 HSPs)
scaffold0184 (105-225)||(31830-31951)
[»] scaffold0078 (1 HSPs)
scaffold0078 (105-225)||(40893-41014)
[»] scaffold0103 (1 HSPs)
scaffold0103 (105-225)||(33092-33212)
[»] scaffold0008 (1 HSPs)
scaffold0008 (104-192)||(72290-72378)
[»] scaffold0309 (3 HSPs)
scaffold0309 (106-192)||(8772-8858)
scaffold0309 (145-192)||(6620-6667)
scaffold0309 (37-82)||(8881-8926)
[»] scaffold0025 (1 HSPs)
scaffold0025 (104-202)||(146050-146148)
[»] scaffold1276 (1 HSPs)
scaffold1276 (38-202)||(764-928)
[»] scaffold1957 (1 HSPs)
scaffold1957 (104-192)||(143-231)
[»] scaffold0251 (2 HSPs)
scaffold0251 (110-192)||(14099-14181)
scaffold0251 (156-192)||(22106-22142)
[»] scaffold0047 (1 HSPs)
scaffold0047 (104-192)||(76821-76909)
[»] scaffold1753 (1 HSPs)
scaffold1753 (166-225)||(1151-1210)
[»] scaffold0490 (2 HSPs)
scaffold0490 (106-192)||(5517-5603)
scaffold0490 (37-82)||(5626-5671)
[»] scaffold0234 (1 HSPs)
scaffold0234 (124-202)||(18117-18195)
[»] scaffold0174 (1 HSPs)
scaffold0174 (126-202)||(16031-16107)
[»] scaffold0022 (1 HSPs)
scaffold0022 (104-188)||(117065-117149)
[»] scaffold0597 (1 HSPs)
scaffold0597 (139-192)||(1719-1772)
[»] scaffold0032 (1 HSPs)
scaffold0032 (115-192)||(55042-55119)
[»] scaffold0574 (1 HSPs)
scaffold0574 (110-186)||(10219-10295)
[»] scaffold0303 (1 HSPs)
scaffold0303 (104-176)||(705-777)
[»] scaffold0456 (3 HSPs)
scaffold0456 (166-225)||(11368-11427)
scaffold0456 (15-150)||(1990-2125)
scaffold0456 (15-150)||(9135-9270)
[»] scaffold0261 (1 HSPs)
scaffold0261 (124-192)||(6728-6796)
[»] scaffold0244 (1 HSPs)
scaffold0244 (110-202)||(23216-23308)
[»] scaffold0003 (1 HSPs)
scaffold0003 (138-202)||(147022-147086)
[»] scaffold0077 (2 HSPs)
scaffold0077 (104-179)||(16171-16246)
scaffold0077 (158-202)||(14774-14818)
[»] scaffold0964 (1 HSPs)
scaffold0964 (139-185)||(1730-1776)
[»] scaffold0465 (1 HSPs)
scaffold0465 (110-188)||(10676-10754)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 8e-82; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 21245505 - 21245280
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  | |||||||||    
T  21245505 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttttggggtggttgagaattgaaatag 21245406  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||| | ||| | | ||||||||| |||||||| |||||||||||||||||||    
T  21245405 ctatagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatc 21245306  T
Q  204 gcactttttgaaaagcagatttctgg 229  Q
    ||||||||||| ||||||||||||||    
T  21245305 gcactttttgagaagcagatttctgg 21245280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 24273262 - 24273483
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||||||||||    
T  24273262 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggggaatcgatttttggggtgtttgagacttgaaatag 24273361  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | | ||||||||| |||||||| || ||||||||||||||||    
T  24273362 ctgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaatc 24273461  T
Q  204 gcactttttgaaaagcagattt 225  Q
    ||||||||| | ||||||||||    
T  24273462 gcactttttaagaagcagattt 24273483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 28349977 - 28349763
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||| | |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||| |||||||||    
T  28349977 ttgaaaagtcgaaatataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagttgtagatta 28349879  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28349878 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttatgcgcgaaatggtgaaaatcgcactttttg 28349779  T
Q  214 aaaagcagatttctgg 229  Q
    ||||||||||||||||    
T  28349778 aaaagcagatttctgg 28349763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 26904216 - 26904004
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||   ||||||||| || |||  ||||||||||||||||| |||    
T  26904216 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaataatttttgggatggttgagacttgaaatagctgtaggtta 26904118  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||    ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  26904117 tgatagagccaagtgtcagg-gagtgtaggcgaaaacggcatc-aaaatccattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 26904020  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  26904019 agaagcagatttctgg 26904004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 43707282 - 43707491
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||| | |||||||||||    
T  43707282 ttgaaaggtcggtgtctaaacgtttttgcaaataagtgattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaatttgctgtagatta 43707381  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
     |||||||||||||||||| |  ||||||||||||||| |||| ||      |||||||||||||||||| |||||||||||||||||||||||||||||    
T  43707382 agatagagccaagtgtcagaagcgtgtaggcgaaaacgacatcaaa------ttaacggtttgaattttacgcgcgaaatggtgaaaatcgcactttttg 43707475  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  43707476 agaagcagatttctgg 43707491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 24087809 - 24087996
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | |||| ||||||||||  | |||  |||||||  |  |||||||||    
T  24087809 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaatagatttttgggtag-ttgaaacttgaatgtttctgtagatt 24087906  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||  ||||||||    
T  24087907 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttgacgatttggattttacgcgcgaaaacgtgaaaat 24087996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 22703773 - 22703609
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||| ||    
T  22703773 gtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaa 22703676  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||    
T  22703675 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaacgatttggattttacgcgcgaaa 22703609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 12728184 - 12727984
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || ||   || ||||||   ||||||| |    
T  12728184 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttaaaacatgaaatttttgtagatca 12728086  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12728085 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttg 12727986  T
Q  214 aa 215  Q
    ||    
T  12727985 aa 12727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 229
Target Start/End: Complemental strand, 20273328 - 20273203
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    |||||| |||||||||||  |||||||||||  | ||||||||||||  ||| ||||||||||||| ||||||||||||| |||||||||||||||||      
T  20273328 ctgtaggttatgatagagttaagtgtcaggagcgcgtaggcgaaaacaacattgaaaacgggttaatggtttgaattttacgcgcgaaatggtgaaaaaa 20273229  T
Q  204 gcactttttgaaaagcagatttctgg 229  Q
    |||||||||||||||| |||||||||    
T  20273228 gcactttttgaaaagctgatttctgg 20273203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 16935144 - 16935047
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||||||||||||||||||||||||||||    
T  16935144 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 16935047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 17005804 - 17005707
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||||||||||||||||||||||||||||    
T  17005804 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 17005707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 34824243 - 34824043
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| |||||||| |||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  34824243 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtaaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 34824145  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| |   |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  34824144 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttg 34824045  T
Q  214 aa 215  Q
    ||    
T  34824044 aa 34824043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 6477474 - 6477650
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||     
T  6477474 ttgaaaagtcggtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagata 6477570  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||  || |||||||||||  |||||||||||||||||||| |||| |||||||||||||| |||||| ||||||||    
T  6477571 atgataaggctaagtgtcaggagcgtgtaggcgaaaacggcatcaaaaatgggttaacggtttggattttacgcgcgaaa 6477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 12636326 - 12636503
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  12636326 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 12636424  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  12636425 tgatagtgccaagtgttaggagcatgtaggcggaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 12636503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 42178419 - 42178596
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| |||||||||| |||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  42178419 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgatgttttggaaaat-gacttttgggatggttgaaacatgaaattcttgtagatta 42178517  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42178518 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 42178596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 11231800 - 11232004
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  11231800 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 11231898  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  11231899 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 11231998  T
Q  214 aaaagc 219  Q
    ||||||    
T  11231999 aaaagc 11232004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 22513647 - 22513851
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  22513647 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 22513745  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  22513746 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 22513845  T
Q  214 aaaagc 219  Q
    ||||||    
T  22513846 aaaagc 22513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 22283661 - 22283549
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| |||||||| |||  || ||||||||||||||||| ||| | | |||||||||| ||||||| ||||||||||||||||| ||    
T  22283661 tgtagattatgttagagtcaagtgtccggagcgtataggcgaaaacggcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaaacg 22283562  T
Q  205 cactttttgaaaa 217  Q
    |||||||||||||    
T  22283561 cactttttgaaaa 22283549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 22775650 - 22775841
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||||| || |||  || || |||  |||||||||||  |||||  |||||||||    
T  22775650 cgttttcgccaataagtgattatgtgaggtttcggaaaat-gatttttgggatggttgaaacatggaatttctgtagattatcttagagttaagtgtcag 22775748  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||  |||||||||||||||||||| |||   | |||| |||||||||| || ||||||||||||||||| ||||||||| ||||||| |||||    
T  22775749 gagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaaaacgcacttttcgaaaagctgattt 22775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 22781028 - 22781219
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||||| || |||  || || |||  |||||||||||  |||||  |||||||||    
T  22781028 cgttttcgccaataagtgattatgtgaggtttcggaaaat-gatttttgggatggttgaaacatggaatttctgtagattatcttagagttaagtgtcag 22781126  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||  |||||||||||||||||||| |||   | |||| |||||||||| || ||||||||||||||||| ||||||||| ||||||| |||||    
T  22781127 gagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaaaacgcacttttcgaaaagctgattt 22781219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 12642119 - 12642277
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  12642119 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 12642217  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  12642218 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 12642277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 24686243 - 24686441
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||  || |||  || ||||||   | |||||||    
T  24686243 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttggaatggttgaaacatgaaatttttatagatta 24686341  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  24686342 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcactttttg 24686441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 28776269 - 28776467
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  28776269 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 28776367  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| |||||||||||    
T  28776368 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgcactttttg 28776467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 3799080 - 3799238
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| | |||||||| ||||||||| ||    
T  3799080 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaaatatgatagtgccaagtgttag 3799178  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  3799179 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 3799238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 19358687 - 19358519
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg---gggtgattgtcacttgaaatag-ctgtagattatgatagagc 122  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||    ||||| |||  ||||||| |   ||||| ||||||||||||     
T  19358687 gtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttttttttgggtggttgaaacttgaatttttctgtatattatgatagagt 19358589  T
Q  123 caagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||  |||||| ||||||  |||||||||| | |||||||||||| ||||||| ||||||    
T  19358588 taagtgtcaggaacatgtaggtgaaaacaacatcgaaaacagattaacggtttgatttttatgagcgaaa 19358519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 34877549 - 34877458
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatgg 195  Q
    ||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  34877549 ctgtagaatatgatagagctaagtgtcaggagcgtgttggcgaaaacggcatcgaaaacagattaatggtttgaattttacgcgcgaaatgg 34877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 19659596 - 19659508
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  19659596 ctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 19659508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 8943644 - 8943467
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  8943644 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 8943546  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   |||||||| ||||| ||||||||| ||  ||||||||||| ||||||||||||||    
T  8943545 tgatagtgccaagtgttaggagcatgtaggcggaaacgacatcgaaaatggagtaacggtttgatttttatgcgcgaaa 8943467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 27366880 - 27366966
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  27366880 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaa 27366966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 22274428 - 22274307
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| || || |||| ||| |||  || ||||||||||| ||||| ||| | | |||||||||||||||||| ||| ||||||||||||| ||    
T  22274428 tgtagattatgttacagtcaagggtccggagcgtataggcgaaaacagcatcaaaatccgattaacggtttgaattttacgcgtgaaatggtgaaaagcg 22274329  T
Q  205 cacttttt-gaaaagcagattt 225  Q
    |||||||| ||||||| |||||    
T  22274328 cactttttggaaaagctgattt 22274307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 21274788 - 21274842
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  21274788 tgtaggcgaaaacggcatcgaaaatggattaacggtttgatttttatgcgcgaaa 21274842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 23822260 - 23822348
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||| | |||||| |||||    
T  23822260 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcgaaa 23822348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 23831339 - 23831427
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||| | |||||| |||||    
T  23831339 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcgaaa 23831427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 24383335 - 24383291
Alignment:
Q  156 cgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaa 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  24383335 cgaaaacgggttaacggtttgaattttacgcgcgaaatggtgaaa 24383291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 36891382 - 36891470
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||||||||||||||| || |||||||||||| ||||||||||||||    
T  36891382 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaatggattaacggtttgagttttatgcgcgaaa 36891470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 34897302 - 34897362
Alignment:
Q  140 taggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaa 200  Q
    ||||||||||||| ||||||| ||| |||| ||||||||||||||||| ||||||| ||||    
T  34897302 taggcgaaaacggaatcgaaatcggattaaaggtttgaattttatgcgtgaaatggcgaaa 34897362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 9653597 - 9653679
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||| |||||| | |||||||| |||   ||||| ||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  9653597 attaagatagaactaagtgtcatgaacacgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttacgcgcgaaa 9653679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 45617970 - 45618035
Alignment:
Q  137 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||| |||||||| | ||||| ||||| |||||| ||||||||  ||||||||    
T  45617970 gtgtaggcgaaaacggcgtcgaaaacagattaacagtttggattttacgcgcgaaaacgtgaaaat 45618035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 24383375 - 24383327
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacgg 152  Q
    ||||||| ||||||||||| |||||| ||||  ||||||||||||||||    
T  24383375 ctgtagaatatgatagagctaagtgttaggagcgtgtaggcgaaaacgg 24383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 32950724 - 32950498
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  | |||||||||    
T  32950724 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttttggggtggttgagaattgaaatag 32950625  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaa-acgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||  ||||||||| |||||||| ||||||||||||||||||    
T  32950624 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgaattaacggttggaattttacgcgcgaaatggtgaaaat 32950525  T
Q  203 cgcactttttgaaaagcagatttctgg 229  Q
    |||||||||||| ||||||||||||||    
T  32950524 cgcactttttgataagcagatttctgg 32950498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 22532386 - 22532588
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 126  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| ||| ||||||||||||||||||||    
T  22532386 gtctaaacgtttttgcaaataagggattatgtgaggtttggcaaaatgattcttgggatggttgagacttgaaattgctatagattatgatagagccaag 22532485  T
Q  127 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttc 226  Q
    ||||||||  ||||||||||||||| |||| ||| | | ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||    
T  22532486 tgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattgcactttttgagaagcagatttc 22532585  T
Q  227 tgg 229  Q
    |||    
T  22532586 tgg 22532588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 22537071 - 22537273
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 126  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| ||| ||||||||||||||||||||    
T  22537071 gtctaaacgtttttgcaaataagggattatgtgaggtttggcaaaatgattcttgggatggttgagacttgaaattgctatagattatgatagagccaag 22537170  T
Q  127 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttc 226  Q
    ||||||||  ||||||||||||||| |||| ||| | | ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||    
T  22537171 tgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattgcactttttgagaagcagatttc 22537270  T
Q  227 tgg 229  Q
    |||    
T  22537271 tgg 22537273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 39694519 - 39694730
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  |||||||| |||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||||| ||||||||    
T  39694519 ttgaaaagtcggtgtctaaacatttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatagccgtagatta 39694618  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||| ||||||||||||| |||||||||||| ||| |||| ||| | | ||||||||||| |||||| ||||||||||||||||||||||||||||     
T  39694619 tgatagaaccaagtgtcaggagagtgtaggcgaatacgacatcaaaatccgattaacggtttgtattttacgcgcgaaatggtgaaaatcgcacttttta 39694718  T
Q  214 aaaagcagattt 225  Q
    | ||||||||||    
T  39694719 agaagcagattt 39694730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 39364592 - 39364369
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg-aaaatcgatttttggggtgattgtcacttgaaatagct 105  Q
    |||||| ||||||| ||| ||||||||||||  |||||| |||||| |||||||| ||||| ||||   ||  ||||| || |||  ||||||||| | |    
T  39364592 tttatgcttgaaaattcggagtctaaacgttcatgcaaataagagactatgtgagttttgggaaaaataatccttgggatggttgagacttgaaattgtt 39364493  T
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgc 205  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| |||||||| |||||||||||||||||||||    
T  39364492 gtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgc 39364393  T
Q  206 actttttgaaaagcagatttctgg 229  Q
    ||||||||| ||||||||||||||    
T  39364392 actttttgagaagcagatttctgg 39364369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 17501948 - 17501770
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||  ||||||||||||||||||||||||||||||   |||||||||||||    
T  17501948 gattatgtgaggttttggaaaat-gattcttgggatggttgaaacttgaaatttctgtagattatgatagagccaagtgtcaggggcgtgtaggcgaaaa 17501850  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    ||||||| ||| | | |||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||||||    
T  17501849 cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaatgcactttttgaaaagctgatttctgg 17501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 23451284 - 23451104
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 110  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||   ||||| |||  ||||||| |   |||||||    
T  23451284 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgattttttttgggtggttgaaacttgaatttttctgtaga 23451186  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  23451185 ttatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgagttaacggtttgatttttacgcgcgaaa 23451104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 44522418 - 44522629
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| |||| ||||| || |||  ||||||||| |||||||||    
T  44522418 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gattcttgggatggttgagacttgaaattgctgtagat 44522515  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || ||||||||||||||||||||  ||| |||||||||| ||| | ||| | | |||||| ||  ||||||| |||||||||||||||||||||||||||    
T  44522516 taagatagagccaagtgtcaggagcgtggaggcgaaaacagcaccaaaatccgattaacgattgaaattttacgcgcgaaatggtgaaaatcgcactttt 44522615  T
Q  212 tgaaaagcagattt 225  Q
    ||| ||||||||||    
T  44522616 tgagaagcagattt 44522629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 17611528 - 17611715
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  17611528 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 17611625  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||  |||||||  ||||||||    
T  17611626 atgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacacgcgaaaacgtgaaaat 17611715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 4233664 - 4233486
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||   ||||||||||||||||   |||||||||||  |||||||||||||    
T  4233664 gattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatttatgtagattatgatagatttaagtgtcaggagcgtgtaggcgaaaa 4233566  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    || |||| ||| | | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  4233565 cgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttgaaaagctgatttctgg 4233486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 13662726 - 13662940
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  13662726 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gaattttgggatggttgaaacatgaaatttttgtagatta 13662824  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||| ||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  13662825 tgttagagtcaagtctcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttg 13662924  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  13662925 aagaactgatttctgg 13662940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 34302361 - 34302182
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 110  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||   ||||| |||  ||||||| |   | |||||    
T  34302361 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaa-tcgattttttttgggtggttgaaacttgaatttttccgtaga 34302264  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  34302263 ttatgatagagctaagtgttaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggcttggtttttatgcgcgaaa 34302182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 24496415 - 24496237
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg--ggtgattgtcacttgaaatag-ctgtaga 110  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||    |||| |||  ||||||| |   |||||||    
T  24496415 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgtgaaatcgattttttttaggtggttgaaacttgaatttttctgtaga 24496317  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcga 190  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||| |  ||||||||||||    
T  24496316 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacgccatcgaaaacgggttaacggttaggtttttatgcgcga 24496237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 3273700 - 3273523
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaat-agctgtaga 110  Q
    ||||||||| |  ||||||||||||||||||| ||| || ||||||||||||||||| |||||||||   ||||| |||  ||||||| | | |||||||    
T  3273700 ttgaaaagttggtgtctaaacgtttttgcaaataagggagtatgtgaggtttggaaa-tcgattttttttgggtggttgaaacttgaatttatctgtaga 3273602  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcg 189  Q
     ||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||| ||||  |||||||||||    
T  3273601 atatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcaaaaacgggttaacgatttggtttttatgcgcg 3273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 24979913 - 24979771
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  ||||||| |   ||||||||||||||||||| ||    
T  24979913 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaa 24979816  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaac 170  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||    
T  24979815 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaac 24979771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 22583897 - 22584070
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||| |||  |||||||  |   ||||||||    
T  22583897 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg-aaatcgattttt-gggtggttgaaacttgaatttttttgtagatt 22583994  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    ||||||| || ||||||||||||  |||||| |||||||||||||||||  | |||||||||||  ||||||||||    
T  22583995 atgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaatagattaacggtttgttttttatgcgc 22584070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 13721386 - 13721563
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  13721386 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 13721484  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  13721485 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 13721563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 22006758 - 22006936
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||| ||||| ||||||||| ||  |||||||||||||    
T  22006758 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaa 22006856  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    ||||||| ||| | | ||||| |||| ||||||| ||||||||||||||||| ||||||||||||| | | |||||||||    
T  22006857 cggcatcaaaatccgattaacagtttaaattttacgcgcgaaatggtgaaaaacgcactttttgaagaactgatttctgg 22006936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 39114862 - 39114701
Alignment:
Q  63 tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaac 162  Q
    |||||||||| |||||||||| ||||||  || || |||   ||||||||||| ||||| ||||||||||||  ||||||||||||||  |||| ||| |    
T  39114862 tttggaaaat-gatttttgggatgattgaaacatggaatttttgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacaacatcaaaatc 39114764  T
Q  163 gggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
     | |||||| ||||||||||| ||||||||||||||||| | ||||||||||||||| |||||    
T  39114763 cgattaacgatttgaattttacgcgcgaaatggtgaaaaacacactttttgaaaagctgattt 39114701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 644098 - 643894
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  644098 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 644000  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  643999 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 643900  T
Q  214 aaaagc 219  Q
    ||||||    
T  643899 aaaagc 643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 26220362 - 26220184
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag--ctgtagat 111  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| | ||||||||| || |||  ||| |||||    ||||||||    
T  26220362 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccaatttttggg-tggttgaaact-gaaatttttctgtagat 26220265  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  26220264 tatgatagagctaagtgtcaggagcgcgtaggcaaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 26220184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 23889614 - 23889438
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||  ||||| |||  ||||||| |   |||||||||    
T  23889614 ttgaaaaatcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttt--gggtggttgaaacttgaatttttctgtagatt 23889518  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||| || || | | |||||  |||||| |||||||||||||||||| | |||||||||||| ||| ||||||||||    
T  23889517 atgatagggctaaatattaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgattttaatgcgcgaaa 23889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 26222613 - 26222701
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  26222613 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 26222701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 16873528 - 16873686
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  16873528 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 16873626  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  16873627 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 16873686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 15319621 - 15319819
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg-tagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||| || ||||||| || |||  || ||||||   |  |||||||    
T  15319621 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgaaaat-gacttttgggatggttgaaacatgaaattttttatagatta 15319719  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  15319720 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaaacgcactttttg 15319819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 15499990 - 15500188
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg-tagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||| || ||||||| || |||  || ||||||   |  |||||||    
T  15499990 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgaaaat-gacttttgggatggttgaaacatgaaattttttatagatta 15500088  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  15500089 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaaacgcactttttg 15500188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 271915 - 272021
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| ||||    
T  271915 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgca 272014  T
Q  207 ctttttg 213  Q
    |||||||    
T  272015 ctttttg 272021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 829740 - 829634
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| ||||    
T  829740 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgca 829641  T
Q  207 ctttttg 213  Q
    |||||||    
T  829640 ctttttg 829634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 24717415 - 24717536
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| |||||  |||||||||||  |||||||||||||||||||| ||| | | |||||||| ||||||||| || | |||||||||||| ||    
T  24717415 tgtagattatgttagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtatgaattttacgcacaaaatggtgaaaaacg 24717514  T
Q  205 cacttttt-gaaaagcagattt 225  Q
    |||||||| ||||||| |||||    
T  24717515 cactttttggaaaagctgattt 24717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 3431830 - 3431917
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||| | ||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  3431830 tgtagattatgatagtgtcaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcacgaaa 3431917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 20481132 - 20481064
Alignment:
Q  124 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  20481132 aagtgtcaggagcatgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaa 20481064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 273955 - 273901
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  273955 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 273901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 641894 - 641948
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  641894 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 641948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 827700 - 827754
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  827700 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 30766240 - 30766326
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  ||||||||||||||||||| |||||||||||||||||| |  ||||| ||||||||    
T  30766240 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcattgaaaacgggttaacggttgggtttttacgcgcgaaa 30766326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 5080930 - 5080848
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||  | ||||| ||||||  |||||| |||||||||||||||||| | ||||| |||||| ||||||||||||||    
T  5080930 attatgatagtactaagtggcaggaacatgtaggtgaaaacggcatcgaaaacagattaacagtttgatttttatgcgcgaaa 5080848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 16039593 - 16039675
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   |||||| ||||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  16039593 attatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaatggtttgatttttatgcgcgaaa 16039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 24386484 - 24386538
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  24386484 tgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaa 24386538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 23809533 - 23809452
Alignment:
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatgg 195  Q
    ||||||||  |||| ||||||  | |||| |||||| || ||||||||||| ||||||||||| |||||| |||||||||||    
T  23809533 tgatagagttaagtttcaggagcgcgtagacgaaaatggaatcgaaaacggattaacggtttggattttacgcgcgaaatgg 23809452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 24239332 - 24239270
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||||||| |||| ||  | | |||||| |||||||||||||||||||| ||||||||    
T  24239332 gtaggcgaaaacgacatcaaattccgattaacgatttgaattttatgcgcgaaagggtgaaaa 24239270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 24624517 - 24624449
Alignment:
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaatt 180  Q
    ||||||||||| |||||| ||||    |||||||||||||| || |||||||| |||||| ||||||||    
T  24624517 tatgatagagctaagtgtaaggagcacgtaggcgaaaacggaattgaaaacggattaacgatttgaatt 24624449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 18366742 - 18366965
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||  |||  |||||||||||    
T  18366742 gaatttatgattgaaaagtcggagtctaaacgtttttgcaaacatgagattatgtgaggtttgggaaatcgatttt--gggtttttgagacttgaaatag 18366839  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
     |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||||||||||||    
T  18366840 ttgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatc 18366939  T
Q  204 gcactttttgaaaagcagatttctgg 229  Q
    |||||||||||||| |||||||||||    
T  18366940 gcactttttgaaaaacagatttctgg 18366965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 178711 - 178935
Alignment:
Q  5 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 104  Q
    |||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||    
T  178711 aatttatgtttgaagagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagc 178810  T
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||  ||||||||||||||||||||||||||||    
T  178811 tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttgaaattttatgcgcgaaatggtgaaaatcg 178910  T
Q  205 cactttttgaaaagcagatttctgg 229  Q
    |||||||||| ||||||||||||||    
T  178911 cactttttgagaagcagatttctgg 178935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 3393982 - 3394208
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgat-tgtcacttgaaata 102  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |   ||  |||| |||||    
T  3393982 gaatttatgcttgaaaagtcagagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgattttgggggggggctgagacttaaaata 3394081  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | |||| ||||||||||||| ||||||||||||||||||    
T  3394082 gctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaagggtttgaattttacgcgcgaaatggtgaaaat 3394181  T
Q  203 cgcactttttgaaaagcagatttctgg 229  Q
    |||||||||||||||||||||||||||    
T  3394182 cgcactttttgaaaagcagatttctgg 3394208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 13029400 - 13029610
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  13029400 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13029498  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13029499 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 13029598  T
Q  214 aaaagcagattt 225  Q
    | ||||||||||    
T  13029599 agaagcagattt 13029610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 13025808 - 13026018
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| |||||||||| |||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  13025808 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatttgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13025906  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13025907 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 13026006  T
Q  214 aaaagcagattt 225  Q
    | ||||||||||    
T  13026007 agaagcagattt 13026018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 12276615 - 12276399
Alignment:
Q  8 ttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgt 107  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||  || |||||||||| |    
T  12276615 ttatgcttgaaaaatcggagtctaaacgtttttgcaaacaagagattatctgaggtttgggaaatcgatttt-ggggtggttgagacatgaaatagctat 12276517  T
Q  108 agattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcac 207  Q
    |||||||||||||||||||||| |||| ||||||||| |||||| |||| ||| | | |||||||||||||| |||||||||||||||||||||||||||    
T  12276516 agattatgatagagccaagtgttaggagagtgtaggcaaaaacgacatcaaaatccgattaacggtttgaatgttatgcgcgaaatggtgaaaatcgcac 12276417  T
Q  208 tttttgaaaagcagattt 225  Q
    ||||||||||| ||||||    
T  12276416 tttttgaaaagtagattt 12276399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 37038859 - 37038644
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  ||||||||||||||||||||    
T  37038859 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatagctgtagatt 37038761  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt 212  Q
    ||||||||||||||| ||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||||||||||| |||||||||    
T  37038760 atgatagagccaagtttcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaattgcacttttt 37038661  T
Q  213 gaaaagcagatttctgg 229  Q
    |||||||||||||||||    
T  37038660 gaaaagcagatttctgg 37038644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 42324213 - 42324417
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| |||  ||||||||||||||| |||||| |||| ||||| || |||  ||||||||||||||||||||    
T  42324213 ttgaaaagtcggtgtctaaacgtttttgcaaataaggaattatgtgaggtttgagaaaat-gattcttgggatggttgagacttgaaatagctgtagatt 42324311  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt 212  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||| | | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  42324312 atgatagagccaagtgtcaggagagtgtaggcgaaaac-gcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgcacttttt 42324410  T
Q  213 gaaaagc 219  Q
    |||||||    
T  42324411 gaaaagc 42324417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 9511158 - 9511372
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| |||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  9511158 ttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtgacgtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagatta 9511257  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||| |||||||||||  |||||||||||||||| ||| ||| | | |||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  9511258 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaattttacgcgcgaaatggtgaaaatcgtactttttg 9511357  T
Q  214 aaaagcagatttctg 228  Q
    |||||  ||||||||    
T  9511358 aaaagttgatttctg 9511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 9519133 - 9519347
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| |||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  9519133 ttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtgacgtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagatta 9519232  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||| |||||||||||  |||||||||||||||| ||| ||| | | |||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  9519233 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaattttacgcgcgaaatggtgaaaatcgtactttttg 9519332  T
Q  214 aaaagcagatttctg 228  Q
    |||||  ||||||||    
T  9519333 aaaagttgatttctg 9519347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 17513640 - 17513425
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  ||||||||||||| ||||| |||||| |||||||| |||||  ||||| |||  |||||  | ||   ||||||||| |||||| ||    
T  17513640 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgagttttggggaaaat-gatacttgggagggttaagacttgaaattgctgtaaat 17513543  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||    
T  17513542 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttt 17513443  T
Q  212 tgaaaagcagatttctgg 229  Q
    ||| ||||||||||||||    
T  17513442 tgagaagcagatttctgg 17513425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 229
Target Start/End: Original strand, 50351068 - 50351276
Alignment:
Q  21 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 119  Q
    ||||| || ||| ||||||||| || ||| ||||||||||||||| || ||||  ||| ||||| || |||  |||||||||  ||||||||||||||||    
T  50351068 gtcgatgtttaagcgtttttgccaataagtgattatgtgaggttttgggaaata-attattgggatggttgagacttgaaatttctgtagattatgatag 50351166  T
Q  120 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagc 219  Q
    ||  |||||||||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  50351167 agttaagtgtcaggaccgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacacactttttgaaaagc 50351266  T
Q  220 agatttctgg 229  Q
    ||||||||||    
T  50351267 agatttctgg 50351276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 14818905 - 14818717
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||| || |||||||||| |||  |||||||  |     
T  14818905 gaatttatgcttgaaaagtcggagtctaaatgtttttgcaaataagagattatgtgaggtttgggaaataga-ttttggggtggttgaaacttgaatctt 14818807  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
      |||| |||||||||| || ||||||||||||  |||||| ||||| |||||||||||| | |||||||||||| ||||||||||||||    
T  14818806 tatgtatattatgatagggctaagtgtcaggaacatgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 14818717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 24340184 - 24340354
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  24340184 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 24340281  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24340282 atgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatg 24340354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 29172095 - 29172268
Alignment:
Q  18 aaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatga 116  Q
    |||||||  ||||||||||||| ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||||||    
T  29172095 aaagtcggtgtctaaacgtttt-gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatga 29172192  T
Q  117 tagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  29172193 tagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaa 29172268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 12536463 - 12536275
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| | ||||||||  || |||  ||||||| |   |||||||||    
T  12536463 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccaatttttgga-tggttgaaacttgaatttttctgtagatt 12536365  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||| |||||| ||| ||||  ||||||||    
T  12536364 atgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacggtttggattttacgcgagaaaacgtgaaaat 12536275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 28557754 - 28557633
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    |||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||||||||||      
T  28557754 ctgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaat 28557655  T
Q  204 gcactttttgaaaagcagattt 225  Q
    |||||||||||||||| |||||    
T  28557654 gcactttttgaaaagctgattt 28557633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 37641736 - 37641914
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||| |||||  |||||||||||| |||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||    
T  37641736 ttgaatagtcggtgtctaaacgtttatgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagatt 37641834  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  37641835 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaa 37641914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 54038740 - 54038950
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| |||||| |||||||| ||||||| |||||||||| || |||  || || |||   |||||||||    
T  54038740 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatatgaggttttggaaaat-gatttttgggatggttgaaacatggaatttttgtagatta 54038838  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||| |||||| | |||||||||    
T  54038839 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatgatgaaaaacacactttttg 54038938  T
Q  214 aaaagcagattt 225  Q
    |||||| |||||    
T  54038939 aaaagctgattt 54038950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 15517464 - 15517277
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||||||   ||||||||||||| ||||| ||| ||||||||||||||| |||||| ||||||||||  | |||  ||||||| |   |||||||||    
T  15517464 ttgaaaagtcagtgtctaaacgtttt-gcaaataagtgattatgtgaggttttgaaaattgatttttgggtag-ttgaaacttgaatttttctgtagatt 15517367  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| ||| || ||||  |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||  ||||||||    
T  15517366 atgatagagctaagagttaggagcgtgtaggcgaaaacggcatcaaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 15517277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 30207029 - 30206837
Alignment:
Q  21 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 119  Q
    |||||||| ||| |||||| || || ||| ||||||||||||||| ||||||| |||||||| | || |||  || ||||||  ||||| |||||| |||    
T  30207029 gtcgaagtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctgtaaattatgttag 30206931  T
Q  120 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||||||||||  |||||||||||||| | ||| ||| | | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  30206930 agtcaagtgtcaggagcgtgtaggcgaaaacagtatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttg 30206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 34851562 - 34851717
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||| ||||||||||||||| | |||||||| |||||| || |||  |||| || |   ||||||||||||||||||| |||||||||||     
T  34851562 ttttgcaaataagtgattatgtgaggttttggaaatcgatatttggg-tggttgaaacttaaatttttctgtagattatgatagagctaagtgtcaggag 34851660  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  34851661 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgtgaaa 34851717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 52338192 - 52338369
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc-tgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| |||||||||| | | |||||||||||||  | ||   ||||||| |  | ||||||||    
T  52338192 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttgggcgg-ttaaaacttgaattttcctgtagatt 52338289  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  52338290 atgatagagctaagtgtcaggagagtttaggcaaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaa 52338369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 12159096 - 12158915
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg----gggtgattgtcacttgaaatag-ctgta 108  Q
    |||||||||||  ||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||     ||||| |||  ||||||| |   |||||    
T  12159096 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatctgaggtttgggaaatcgattttttttttgggtggttgaaacttgaatttttctgta 12158998  T
Q  109 gattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||  ||||||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  12158997 aattatgatagagttaagtgtcag-agcgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttatgcgcgaaa 12158915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 13511878 - 13511698
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 110  Q
    |||||||||||  ||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||   ||||| |||  ||||||| |   |||||||    
T  13511878 ttgaaaagtcggtgtctaaacgtttt-gcaaataagcgataatgtgaggtttgggaaatagattttttttgggtggttgaaacttgaatttttctgtaga 13511780  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||| |||| ||||||  ||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  13511779 ttatgatagagctaagtttcaggagcgtgtaggagaaaacggcatcgaaaacgggttaacggtttggtttttatgcgggaaa 13511698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 18910791 - 18910614
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  18910791 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 18910693  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18910692 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 18910614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 20188448 - 20188350
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||  ||||||||    
T  20188448 ctgtagattatgatagagctaagtgtcaggaacgcgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcgcgaaaacgtgaaaat 20188350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 45530844 - 45531024
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 110  Q
    |||||||||||  ||||||||||||||||||| | | |||||||||||||||||||| || ||||||   ||||| |||  ||||||| |   |||||||    
T  45530844 ttgaaaagtcggtgtctaaacgtttttgcaaataggggattatgtgaggtttggaaa-tcaattttttttgggtggttggaacttgaatttttctgtaga 45530942  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| | |||||||||||| ||||||| ||||||    
T  45530943 ttatgatagggccaagtgtcaggaacatgtaggtgaaaacggtatcgaaaacagattaacggtttgatttttatgagcgaaa 45531024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 23395344 - 23395441
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||  ||||||||    
T  23395344 tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaat 23395441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 52212659 - 52212818
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||| | ||||||||||| ||| ||||| |||||||||| |||||||||||||||| |||| ||||||| |||||||||| |||  |||||||  |     
T  52212659 gaatttacgcttgaaaagtcggagtgtaaacatttttgcaaataagagattatgtgaggcttgggaaatcga-ttttggggtggttgaaacttgaatctt 52212757  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacg 163  Q
     |||||||||||||||| || ||||||||||||  |||||  |||||||||||||||||||    
T  52212758 tctgtagattatgatagggctaagtgtcaggaacatgtagatgaaaacggcatcgaaaacg 52212818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 16820935 - 16820721
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||  || |||  || ||||||   |||||||||    
T  16820935 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttggaatggttgaaacatgaaatttttgtagatta 16820837  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||  ||||||||||||||| |||| ||| | | ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  16820836 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttggattttacgcgcgaaatggtgaaaaacgcactttttg 16820737  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  16820736 aagaactgatttctgg 16820721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36167341 - 36167163
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||| ||||| |||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| |||  |  |||||||||    
T  36167341 ttgaagagtcggtgtctaaatgttttggcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaactggaatctttctgtagatt 36167243  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  36167242 gtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 36167163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 40039355 - 40039541
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| |||| ||||| || ||   |||||||||  ||||||||||    
T  40039355 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gattcttgggatggtttaaacttgaaatttctgtagatta 40039453  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||| |||||||||||  |||| ||||||| ||||||| |||   | |||||||||||||||||||||||||||| |||||||    
T  40039454 tgatagagctaagtgtcaggagcgtgtgggcgaaagcggcatcaaaatttgattaacggtttgaattttatgcgcgaaatagtgaaaa 40039541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 17547709 - 17547895
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||||||   ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||     
T  17547709 ttgaaaagtcagtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagata 17547805  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||  || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||  ||||||||    
T  17547806 atgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttacgcgcgaaaacgtgaaaat 17547895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 1468201 - 1468405
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  1468201 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 1468299  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  1468300 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 1468399  T
Q  214 aaaagc 219  Q
    ||||||    
T  1468400 aaaagc 1468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 16934462 - 16934629
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||| ||||| ||||||||||    
T  16934462 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgttagagtcaagtgtcag 16934560  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||  ||||||||||||||||| || ||| | | ||||||||||||||||||| ||||||||||||||||    
T  16934561 gagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttattcgcgaaatggtgaaaa 16934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 49232212 - 49232029
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | ||||||||| ||||| ||||||||||    
T  49232212 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagattatgttagagtcaagtgtcag 49232114  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaa 217  Q
    ||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| |||| |||||||||||| |||||||||||||||    
T  49232113 gatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcaaaatggtgaaaaacgcactttttgaaaa 49232029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 11193013 - 11192913
Alignment:
Q  129 tcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctg 228  Q
    |||||| |||||||||||||||| |||| ||| |   |||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  11193013 tcaggagagtgtaggcgaaaacgacatcaaaatccaattaacgatttaaattttacgcgcgaaatggtgaaaatcgcactttttgagaagcagatttctg 11192914  T
Q  229 g 229  Q
    |    
T  11192913 g 11192913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 17956463 - 17956630
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||| |  | |||  || ||||||  |||||||||||| ||||| ||||||||||    
T  17956463 cgttttcgccaataagtgattatgtgaggttttggaaaat-gatttttgagaaggttgaaacatgaaatttctgtagattatgttagaggcaagtgtcag 17956561  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||  ||||||||||||||| |||| ||| | | |||||||||||||||||| || ||||||||||||||    
T  17956562 gagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcacgaaatggtgaaaa 17956630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 21619102 - 21619014
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| ||||||||  |||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  21619102 ctgtagattgtgatagagttaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 21619014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 22147021 - 22147176
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || |||||||||||     
T  22147021 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggag 22147119  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     || |||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  22147120 cgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaa 22147176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 11849835 - 11850020
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  |||||||||||||||||||||   || |||| ||||||  | ||||||| ||||||| || |||  ||||||| |   |||||||||    
T  11849835 ttgaaaactcggtgtctaaacgtttttgcaaaca---gagtatgcgaggttctggaaatcgagttttggg-tggttgaaacttgaatttttctgtagatt 11849930  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| ||||||||| |  | |||||||||||||| ||||||||||||||||||||||| || ||| ||||||||  ||||||||    
T  11849931 atgatagagctaagtgtcagaagcgcgtaggcgaaaacggtatcgaaaacgggttaacggtttggatcttacgcgcgaaaacgtgaaaat 11850020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 8604558 - 8604470
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  8604558 ctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 8604470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 38167460 - 38167362
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||||||  ||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  38167460 ctgtacattaagatagggctaagtgtcaggagtgtgtaggtgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaat 38167362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 53770583 - 53770501
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  53770583 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 53770501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 19568546 - 19568634
Alignment:
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||||||||||||| || |||| ||| | | ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  19568546 agtgtaggcgaaa-cgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaatcgcactttttgataagcagattt 19568634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 17758767 - 17758874
Alignment:
Q  93 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  ||||||||||||||||||| |||||| ||||  |||||||||||||| ||||| ||| | | |||| ||||| ||||||||||| ||||    
T  17758767 acttgaaatttctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatcaaaatccgattaatggtttcaattttatgcgtgaaa 17758866  T
Q  193 tggtgaaa 200  Q
    || |||||    
T  17758867 tgatgaaa 17758874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 19060087 - 19060194
Alignment:
Q  93 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  ||||||||||||||||||| |||||| ||||  |||||||||||||| ||||| ||| | | |||| ||||| ||||||||||| ||||    
T  19060087 acttgaaatttctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatcaaaatccgattaatggtttcaattttatgcgtgaaa 19060186  T
Q  193 tggtgaaa 200  Q
    || |||||    
T  19060187 tgatgaaa 19060194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 13968129 - 13968215
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  13968129 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaa 13968215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 13973604 - 13973690
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  13973604 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaa 13973690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 19430636 - 19430547
Alignment:
Q  109 gattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtga 198  Q
    ||||| |||||| | ||||| |||||  ||||| ||||||||||||||||||||   |||||||||||||||||| ||||||||||||||    
T  19430636 gattaggatagaactaagtggcaggagcgtgtacgcgaaaacggcatcgaaaacaaattaacggtttgaattttacgcgcgaaatggtga 19430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 11061707 - 11061795
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| |||||||| |||||||| |||  |||||| ||||||||  |||||||||| |||||||||||| ||||||||||||||    
T  11061707 ctgtacattaagatagagctaagtgtcatgaacatgtaggtgaaaacggtgtcgaaaacggattaacggtttgatttttatgcgcgaaa 11061795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 17100201 - 17100113
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| |||||||| |||||||| |||   ||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  17100201 ctgtacattaagatagagctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggattgatttttatgcgcgaaa 17100113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 10551114 - 10550936
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttga-aatagctgtagatt 112  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| |||||||| ||||| |||  ||| ||   |   |||| |||    
T  10551114 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgattttt-gggtggttgaaactggattttttttgtatatt 10551016  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||| |||||| ||||  | |||||||||||||||||||||||||| |||||||||| | ||||| ||||||||    
T  10551015 gtgatagagctaagtgttaggagcgcgtaggcgaaaacggcatcgaaaacggattaacggttttatttttaggcgcgaaa 10550936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 12808924 - 12808849
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  12808924 tgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcactttttg 12808849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 13667324 - 13667460
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttga-aatagctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||  |||| |||  ||||||   |  |||||||||    
T  13667324 ttgaaaactcggtgtctaaacgtttt-gcaaataagagattatgcgaggtttgggaaatcgattttt-aggtggttgaaacttgagtctttctgtagatt 13667421  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacg 151  Q
    |||||||||  |||||||||||  |||||||||||||||    
T  13667422 atgatagagttaagtgtcaggagcgtgtaggcgaaaacg 13667460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 11882755 - 11882837
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |  ||||||||||||   ||||| ||||||||||| |||||| | |||||||||||| ||||||||||||||    
T  11882755 attatgataggggtaagtgtcaggaacaagtaggtgaaaacggcattgaaaacagattaacggtttgatttttatgcgcgaaa 11882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 13327077 - 13327159
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||  | ||||||||||||   ||||| |||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  13327077 attatgataggtctaagtgtcaggaacaagtaggtgaaaacggcatcgaaaacagtttaacggtttgatttttatgtgcgaaa 13327159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 2843707 - 2843654
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  2843707 gtaggtgaaaacggcatcgaaaacggattaatggtttgatttttatgcgcgaaa 2843654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 3992090 - 3992013
Alignment:
Q  115 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| || |||||||| ||||  ||||| ||||||||||||| |||||| |||||||||||| | ||||||||||||    
T  3992090 gatagggctaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacggattaacggtttgattattatgcgcgaaa 3992013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 20417859 - 20417791
Alignment:
Q  124 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||  |||||| |||||||||||||||||  | ||||| |||||| ||||||||||||||    
T  20417859 aagtgtcaggaacatgtaggtgaaaacggcatcgaaaatagattaacagtttgatttttatgcgcgaaa 20417791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 51961708 - 51961755
Alignment:
Q  145 gaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  51961708 gaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaa 51961755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 16260976 - 16260922
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||| |||||||||||||| |||||| ||||| ||||||||||||||    
T  16260976 tgtaggtgaaaatggcatcgaaaacggattaacgatttgatttttatgcgcgaaa 16260922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 23491923 - 23491825
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||| ||||||||| |||||||||||  ||||| ||||||||  ||||||||    
T  23491923 ctgtacattaagatagggctaagtgtcatgaacaagtaggtgaaaacggcaccgaaaacggattaacggtttggtttttacgcgcgaaaacgtgaaaat 23491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 40554745 - 40554959
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  |||||||||||    
T  40554745 gaatttatgcttgaaaagtcggagtttaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaatag 40554843  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| | | |||||||||||||||||| | |||||||||||||||||    
T  40554844 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacagcatcaaaatccgattaacggtttgaattttacgtgcgaaatggtgaaaatc 40554943  T
Q  204 gcactttttgaaaagc 219  Q
    ||||||||||||||||    
T  40554944 gcactttttgaaaagc 40554959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 8756378 - 8756591
Alignment:
Q  5 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 104  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  |||||||||| |    
T  8756378 aatttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaataac 8756476  T
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    | ||| |||||||||||||||||||||||| |||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||||||    
T  8756477 tataggttatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcg 8756576  T
Q  205 cactttttgaaaagc 219  Q
    |||||||||||||||    
T  8756577 cactttttgaaaagc 8756591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 13898285 - 13898071
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  13898285 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttggaaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13898187  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||   | ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13898186 tgatagagccaagtgtcaggagagtgtaggagaaaacggcatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 13898087  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  13898086 agaagcagatttctgg 13898071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 13698880 - 13699085
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||| |  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||||| |||||||||    
T  13698880 ttgaaaagtaggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatagttgtagatta 13698979  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||| |   |||||||||||||||||| || ||||||||||||||| ||||||||||    
T  13698980 tgatagcgccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttacgcacgaaatggtgaaaattgcactttttg 13699079  T
Q  214 aaaagc 219  Q
    ||||||    
T  13699080 aaaagc 13699085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 28720503 - 28720294
Alignment:
Q  21 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 119  Q
    ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||  ||||||||||||||||    
T  28720503 gtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatttctgtagattatgatag 28720405  T
Q  120 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg-aaaag 218  Q
    |||||||||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||||| |||| ||||||||||| |||||    
T  28720404 agccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggttaaaaacgcactttttgaaaaag 28720305  T
Q  219 cagatttctgg 229  Q
    | |||||||||    
T  28720304 ctgatttctgg 28720294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 33001960 - 33001770
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 126  Q
    |||||||||||||| |||| ||| ||||||||||||||||| |||   ||| ||||| || |||  |||||||||  || |||||||||||||||||  |    
T  33001960 gtctaaacgtttttacaaataagggattatgtgaggtttgggaaaataattcttgggatggttgagacttgaaatttctatagattatgatagagcc--g 33001863  T
Q  127 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagc 219  Q
    |||||||| ||||||||||||||||||||| ||| | | ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  33001862 tgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggcttgaattttacgcgcgaaatggtgaaaatctcactttttgaaaagc 33001770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 29004881 - 29004667
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg--gaaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  ||||||||||||  ||||| |||||| |||||||||||||  |||||| ||  |||||| || |||  ||||||||| | |||||||    
T  29004881 ttgaaaagtcggtgtctaaacgttt--gcaaataagagactatgtgaggtttgaggaaaat-gacctttgggatggttgagacttgaaattgttgtagat 29004785  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || |||||||| |||||| ||||  |||||||||||||||||| | ||| | | |||||||||||||||||  |||||||||||||||||||||| ||||    
T  29004784 taagatagagcaaagtgttaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggtttgaatttttcgcgcgaaatggtgaaaatcgcattttt 29004685  T
Q  212 tgaaaagcagatttctgg 229  Q
    ||| ||||||||||||||    
T  29004684 tgataagcagatttctgg 29004667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 48744351 - 48744128
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagct 105  Q
    |||||| ||||||||||| |||||||||||| ||||||| |||||| |||||||| ||| || |||  |||  ||||| || |||  ||||||||| | |    
T  48744351 tttatgcttgaaaagtcggagtctaaacgttcttgcaaataagagactatgtgagttttagggaaaaagatccttgggatggttgagacttgaaattgtt 48744252  T
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgc 205  Q
    |||||||| |||||||| || ||||||||  |||||||||||||||||| | |||   | |||||| || |||||||| | |||||||||||||||| ||    
T  48744251 gtagattaagatagagctaactgtcaggagcgtgtaggcgaaaacggcaccaaaattcgattaacgattggaattttacgtgcgaaatggtgaaaattgc 48744152  T
Q  206 actttttgaaaagcagatttctgg 229  Q
    ||||||||| ||||||||||||||    
T  48744151 actttttgagaagcagatttctgg 48744128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 3288990 - 3289176
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-ta 102  Q
    ||||||||| |||||||||||  |||  |||| ||||||||| ||| ||||||||||||||  |||||||||||||| ||||| |||  |||||||| |     
T  3288990 gaatttatgtttgaaaagtcggtgtc-caacg-ttttgcaaataagtgattatgtgaggttctgaaaatcgattttt-gggtggttgaaacttgaaattt 3289086  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||  |||| |||||||||||||||    
T  3289087 tctgtagattatgatagagctaagtgtcaggaacgtgtaggcaaaaacggcatcgaaaatgggttaacaatttggattttatgcgcgaaa 3289176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 11054523 - 11054344
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg-gggtgattgtcacttgaaatag-ctgtagat 111  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||  ||||| |||  ||||||| |   || || ||    
T  11054523 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttttttgggtggttgaaacttgaatttttctatatat 11054425  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||| || ||||||||||||  | |||| |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  11054424 tatgatagggctaagtgtcaggaacatataggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 11054344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 19486204 - 19486382
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||| |||||  |||||||||||| |||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||    
T  19486204 ttgaatagtcggcgtctaaacgtttctgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagatt 19486302  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  19486303 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggattggtttttatgagcgaaa 19486382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 17467713 - 17467811
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  17467713 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 17467811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 17585501 - 17585403
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  17585501 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 17585403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 13256503 - 13256316
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | |||||||||||| || || |||  ||||||| |   |||||||||    
T  13256503 ttgaaaactcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgattttttgg-tggttgaaacttgaatttttctgtagatt 13256406  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| |||||||||||  ||||||||||||||  |||||||||||||||||||||||  |||||| ||||||||  ||||||||    
T  13256405 atgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttagattttacgcgcgaaaacgtgaaaat 13256316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 32494754 - 32494874
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||| ||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| |     
T  32494754 tgtagattatgttagagtcaagtgtcatgagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaaca 32494853  T
Q  205 cactttttgaaaagcagattt 225  Q
    ||||||| ||||||| |||||    
T  32494854 cacttttagaaaagctgattt 32494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 7822522 - 7822318
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  7822522 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 7822424  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  7822423 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 7822324  T
Q  214 aaaagc 219  Q
    ||||||    
T  7822323 aaaagc 7822318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 7829833 - 7829629
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  7829833 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 7829735  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  7829734 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 7829635  T
Q  214 aaaagc 219  Q
    ||||||    
T  7829634 aaaagc 7829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 27102099 - 27102303
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27102099 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27102197  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  27102198 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 27102297  T
Q  214 aaaagc 219  Q
    ||||||    
T  27102298 aaaagc 27102303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 27109447 - 27109651
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27109447 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27109545  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  27109546 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 27109645  T
Q  214 aaaagc 219  Q
    ||||||    
T  27109646 aaaagc 27109651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 27176227 - 27176023
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27176227 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27176129  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  27176128 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 27176029  T
Q  214 aaaagc 219  Q
    ||||||    
T  27176028 aaaagc 27176023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 38784191 - 38784395
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38784191 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38784289  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  38784290 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 38784389  T
Q  214 aaaagc 219  Q
    ||||||    
T  38784390 aaaagc 38784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 370795 - 370708
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  370795 tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 370708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 13758149 - 13757991
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  13758149 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 13758051  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  13758050 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 13757991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 15951249 - 15951463
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  15951249 tgaaatgtcgatgtttaagcgttttcgccaataagtgcttatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 15951347  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||  ||||||||||||||| |||| ||| | | |||||||||||||||||| | |||||||||||||||  ||||||||||    
T  15951348 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgtgcgaaatggtgaaaaatgcactttttg 15951447  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  15951448 aagaactgatttctgg 15951463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 16383519 - 16383369
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| |||||||||| || |||  |||| ||||   |||||||||||||||||   ||||| ||||| |||||||||||||    
T  16383519 gattatgtgaggttttggaaaat-gatttttgggatggttgaaactttaaatttttgtagattatgatagagtttagtgttaggaacgtgtaggcgaaaa 16383421  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    || |||| ||| | | |||| |||||||||||||||||||||||||||||||    
T  16383420 cgacatcaaaatccgattaatggtttgaattttatgcgcgaaatggtgaaaa 16383369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 14251392 - 14251533
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||| |||| ||||||||| ||||   ||||||||||||    
T  14251392 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattataatagtgccaagtgttaggagcatgtaggcgaaaa 14251490  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  14251491 cggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 14251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 37380602 - 37380504
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||  ||||||||    
T  37380602 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacgacattgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 37380504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 21734752 - 21734838
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| |||| ||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  21734752 gtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgtgaaa 21734838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 37784686 - 37784774
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  37784686 ctgtagattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgagcgaaa 37784774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 10063210 - 10063297
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||| ||||||||| |||||||||||  | ||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  10063210 tgtagattgtgatagagctaagtgtcaggagtgcgtaggtgaaaacggcatcgaaaacgggttaacggttcgatttttaggcgcgaaa 10063297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 48274293 - 48274115
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||| |||||  |||||||  ||||||||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| ||| |   |||||||||    
T  48274293 ttgaagagtcggtgtctaaatatttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaactggaatttttctgtagatt 48274195  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||    
T  48274194 gtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaatggtttggtttttaggcgcgaaa 48274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 21734192 - 21734262
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 176  Q
    ||||||||||||||||| |||| ||||||  || |||||||||||||||||||||||||||||||||||||    
T  21734192 gtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttg 21734262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 15927276 - 15927188
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa-cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||| ||||||| | ||||   |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  15927276 tgtagattatgatagtgccaagtattaggagcatgtaggcgaaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 15927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 2190888 - 2190970
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  2190888 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacgaattaacggtttgatttttatgcgcgaaa 2190970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 3049136 - 3049038
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||||||  |||||||||||||||||||||||||| |||||||||||||  |||||  |||||||  ||||||||    
T  3049136 ctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggtttttactcgcgaaaacgtgaaaat 3049038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 4280843 - 4280757
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  4280843 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaa 4280757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 18980514 - 18980655
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   |||||| |||||    
T  18980514 gattatgtgaggttttggaaaat-gacttttgggatggttggaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggtgaaaa 18980612  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    | |||||||||| || |||||||||||| ||| ||||||||||    
T  18980613 ctgcatcgaaaatggattaacggtttgattttaatgcgcgaaa 18980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 13866472 - 13866559
Alignment:
Q  115 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||| |||||||||||  ||||||||||||||| |||||||||| | |||||||||||  ||||| ||||||||  ||||||||    
T  13866472 gatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacagtttaacggtttggtttttacgcgcgaaaacgtgaaaat 13866559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 3170749 - 3170839
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatgg 195  Q
    |||||| | ||||||||| |||| | ||||| |||||||||||||| | ||||||||||  ||||| |||||||||||| |||||||||||    
T  3170749 tgtagaatgtgatagagctaagtttaaggaacgtgtaggcgaaaacagaatcgaaaacgaattaacagtttgaattttacgcgcgaaatgg 3170839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 13408659 - 13408597
Alignment:
Q  167 taacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    |||||||| |||||||| || |||||||||||||||| |||||||||| ||||||||||||||    
T  13408659 taacggttggaattttacgctcgaaatggtgaaaatcacactttttgagaagcagatttctgg 13408597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 15525278 - 15525360
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||  | |||||| |||| | |||||||||||||||||| | |||||| |||||||||||| ||||||||||||||    
T  15525278 attatgatagtactaagtgttaggagaatgtaggcgaaaacggcattgcaaacggattaacggtttgatttttatgcgcgaaa 15525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 42057002 - 42057084
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   |||||| ||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  42057002 attatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaa 42057084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 3894550 - 3894497
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  3894550 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 3894497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 2028435 - 2028382
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  2028435 gtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 2028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 26070962 - 26071050
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||| |||||||||||| | |||||||||||| ||||||||||||||    
T  26070962 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 26071050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 26094749 - 26094837
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||| |||||||||||| | |||||||||||| ||||||||||||||    
T  26094749 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 26094837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 25123965 - 25123918
Alignment:
Q  145 gaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  25123965 gaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaa 25123918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 112008 - 112061
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| ||||||||||| |||||||| |||||||||||| | ||||||||||||    
T  112008 gtaggtgaaaacggcattgaaaacggattaacggtttgattattatgcgcgaaa 112061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 10063143 - 10063208
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttt 79  Q
    ||||| |||||| ||||||| |||||||||||  || ||||||||||||||| ||||| |||||||    
T  10063143 ttgaagagtcgatgtctaaatgtttttgcaaatgagtgattatgtgaggttttgaaaaccgatttt 10063208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 29847509 - 29847730
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  ||||||||||| ||    
T  29847509 tttatgcttgaaaagtcggagtctaaacatttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaatagttg 29847607  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | ||||||||| |||||||| ||||||||||||||||||||||    
T  29847608 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgca 29847707  T
Q  207 ctttttgaaaagcagatttctgg 229  Q
    |||||||| ||||||||||||||    
T  29847708 ctttttgagaagcagatttctgg 29847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 16132653 - 16132877
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||| ||||||    
T  16132653 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggggaatcgatttttggggtggttgagacttaaaatag 16132752  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||| | | ||||||||| ||| |||| |||||||||||||||||||    
T  16132753 ctgtagattatgatagagccaagtgtcagaagagtgtgggcgaaaacggcatcaaaatccgattaacggttggaa-tttacgcgcgaaatggtgaaaatc 16132851  T
Q  204 gcactttttgaaaagcagatttctgg 229  Q
    ||||||||||| ||||||||||||||    
T  16132852 gcactttttgagaagcagatttctgg 16132877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 18659256 - 18659032
Alignment:
Q  5 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||  |||| ||||||    
T  18659256 aatttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggttttgggaaatcgatttt-ggggtggttgagacttaaaatag 18659158  T
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
     |||||||||||||||| |||||| |||||| |||||||||||||||| |||| ||| | | |||||||||||| ||||| |||||||||||||||||||    
T  18659157 ttgtagattatgatagatccaagtttcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgacttttacgcgcgaaatggtgaaaatc 18659058  T
Q  204 gcactttttgaaaagcagatttctgg 229  Q
     || ||||||||||||||||||||||    
T  18659057 acattttttgaaaagcagatttctgg 18659032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 19443274 - 19443488
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||||||||||     
T  19443274 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatgtttgagacttgaaatagctgtagattt 19443372  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||| | | ||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  19443373 tgatagagccaagtgtcaggagaatgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcacactttttg 19443472  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  19443473 agaagcagatttctgg 19443488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 25753236 - 25753038
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaa 125  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  | || ||||||||||||||||||||||||||||    
T  25753236 gtctaaacgtttttgcaaataagggattatgtgaggtttaggaaaat-gattcttgggatggttgagaatttaaatagctgtagattatgatagagccaa 25753138  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||||||||| ||||||||||||||||||||| ||| | | ||||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  25753137 gtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaattggtgaaaatcgcactttttgagaagcagattt 25753038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 25755406 - 25755208
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaa 125  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  | || ||||||||||||||||||||||||||||    
T  25755406 gtctaaacgtttttgcaaataagggattatgtgaggtttaggaaaat-gattcttgggatggttgagaatttaaatagctgtagattatgatagagccaa 25755308  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||||||||| ||||||||||||||||||||| ||| | | ||||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  25755307 gtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaattggtgaaaatcgcactttttgagaagcagattt 25755208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 20177806 - 20177593
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||  ||| | |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||  |||||| || |||||||||||    
T  20177806 ttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggggtggttgagacttgagattgctgtagatta 20177707  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
     |||||||||||||||| |||  | |||||| ||||||||| | ||| | | ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  20177706 agatagagccaagtgtccggagcgcgtaggcaaaaacggcaccaaaatccgattaacggttggaattttatgcgcgaaatagtgaaaatcgcactttttg 20177607  T
Q  214 aaaagcagatttct 227  Q
    | ||||||||||||    
T  20177606 agaagcagatttct 20177593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 22158185 - 22158398
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||  ||| | |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||  |||||| || |||||||||||    
T  22158185 ttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggggtggttgagacttgagattgctgtagatta 22158284  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
     |||||||||||||||| |||  | |||||| ||||||||| | ||| | | ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22158285 agatagagccaagtgtccggagcgcgtaggcaaaaacggcaccaaaatccgattaacggttggaattttatgcgcgaaatagtgaaaatcgcactttttg 22158384  T
Q  214 aaaagcagatttct 227  Q
    | ||||||||||||    
T  22158385 agaagcagatttct 22158398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 28948394 - 28948179
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaata 102  Q
    |||||| || |||||||||||  ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||     
T  28948394 gaatttttgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttttggaaaat-gattcttgggatggttgaaacttgaaatt 28948296  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     |||||||||||||||||||||||||||||||   | ||||||||||||||||| ||| | | ||||||||||||| |||| |||||| ||||||||||     
T  28948295 tctgtagattatgatagagccaagtgtcaggagcatataggcgaaaacggcatcaaaatccgattaacggtttgaactttacgcgcgagatggtgaaaaa 28948196  T
Q  203 cgcactttttgaaaagc 219  Q
    |||||||||||||||||    
T  28948195 cgcactttttgaaaagc 28948179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 25348175 - 25347952
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagc 104  Q
    |||||| ||||||| ||| |||||||||||| ||||||| |||||| |||||||| |||||  ||||| |||  ||||| || |||  ||||||||| ||    
T  25348175 tttatgcttgaaaattcggagtctaaacgttcttgcaaataagagactatgtgagttttggggaaaat-gatccttgggatggttgagacttgaaattgc 25348077  T
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| || ||||| ||| ||||||||||||||||    
T  25348076 tgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggatttttacgcgtgaaatggtgaaaatcg 25347977  T
Q  205 cactttttgaaaagcagatttctgg 229  Q
    |||||||||| ||||||||||||||    
T  25347976 cactttttgagaagcagatttctgg 25347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 24267656 - 24267469
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||  || |||  ||||||| |   |||||||||    
T  24267656 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatgtttggc-tggttgaaacttgaatttttctgtagatt 24267559  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  24267558 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 24267469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 29415794 - 29415983
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa---tagctgtaga 110  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  |||||||    |  |||||||    
T  29415794 ttgaaaaatcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatctttttctgtaga 29415891  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  29415892 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttatgcgcgaaaacgtgaaaat 29415983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 5109952 - 5110129
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||  || |||  ||||||  |   |||||||||    
T  5109952 ttgaaaaatcggtgtctaaacgtttt-gcaaataagatattatgtgaggtttgggaaatcgatttttggt-tggttgaaacttgagtttttctgtagatt 5110049  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  5110050 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 5110129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 24441470 - 24441308
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||| || |||  ||||||| ||   ||||||||    
T  24441470 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtggggtttgggaaatcgatttttggg-tggttgaaacttgaatatttttgtagatt 24441373  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttga 177  Q
    ||||||| || |||||||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  24441372 atgatagggctaagtgtcaggagcgtgtaggcaaaaacggcatcgaaaacgggttaacggtttga 24441308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 219
Target Start/End: Complemental strand, 19174957 - 19174776
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||| ||||||||||||||| ||||||| |||||| ||| || |||  ||||||| |   |||||||||||||||||  |||||||||||     
T  19174957 ttttgcaaataagcgattatgtgaggttttggaaaat-gatttt-gggatgcttgaaacttgaattttatgtagattatgatagagttaagtgtcaggag 19174860  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagc 219  Q
     | ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||    
T  19174859 cgcgtaggcgaaaacgacattgaaaacgggttaacaatttgaattttatgcgcgaaatggtgaaaaatgcactttttgaaaagc 19174776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 5289316 - 5289498
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||| |||  |||||||||||||||||||||   || |||| ||||||  | ||||||| ||||||| || |||  ||||||| |  ||||||||||    
T  5289316 ttgaaaactcggtgtctaaacgtttttgcaaaca---gagtatgcgaggttctggaaatcgagttttggg-tggttgaaacttgaatt--ctgtagatta 5289409  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  5289410 tgatagagctaagtgtcaggagtgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 5289498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 13750516 - 13750692
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || |||  |||||||  |  |||||||||    
T  13750516 ttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaa-tcgatttttggg-tggttgaaacttgaatctttctgtagatt 13750613  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||| || |||||||||||   |||||| ||||| |||||||||||| | ||||| |||||| ||||||||||||||    
T  13750614 atgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacagattaacagtttgatttttatgcgcgaaa 13750692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 225
Target Start/End: Complemental strand, 16136082 - 16135893
Alignment:
Q  36 tttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagga 134  Q
    |||||||||| ||| |||||||||||||||  |||||  |||||| ||| || |||  ||||||| |   |||||||||||||||||  | |||||||||    
T  16136082 tttttgcaaataagcgattatgtgaggtttttgaaaagtgattttggggatg-ttgaaacttgaattttatgtagattatgatagagttatgtgtcagga 16135984  T
Q  135 aagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
      |  |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||| |||||    
T  16135983 gcgcataggcgaaaacggcattgaaaacgggttaacggtttgaattttacgcgcaaaatggtgaaaaatgcactttttgaaaagctgattt 16135893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 18259436 - 18259591
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||     
T  18259436 ttttgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggag 18259534  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     || ||||| |||||||||||||||||||||||||||||||| | ||||| ||||||    
T  18259535 cgtttaggcaaaaacggcatcgaaaacgggttaacggtttgattattatgtgcgaaa 18259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 16231690 - 16231513
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  16231690 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 16231592  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  16231591 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 16231513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 10488493 - 10488289
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  10488493 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 10488395  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  10488394 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 10488295  T
Q  214 aaaagc 219  Q
    ||||||    
T  10488294 aaaagc 10488289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 16376835 - 16377039
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16376835 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16376933  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  16376934 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 16377033  T
Q  214 aaaagc 219  Q
    ||||||    
T  16377034 aaaagc 16377039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 16384159 - 16384363
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16384159 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16384257  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  16384258 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 16384357  T
Q  214 aaaagc 219  Q
    ||||||    
T  16384358 aaaagc 16384363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 16649833 - 16650031
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16649833 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16649931  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| |||||||||||   ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  16649932 tgttagagtcaagtgtcagggtcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcactttttg 16650031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 25904939 - 25904741
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || |||||||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  25904939 tgaaatgtcgatgtttaaacgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 25904841  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||  ||||||| |||||||||||| ||| | | |||| |||||| |||||| ||||||||||||||||| |||||||||||    
T  25904840 tgttagagtcaagtgtcaagatcgtgtaggtgaaaacggcatcaaaatccgattaatggtttgcattttacgcgcgaaatggtgaaaaacgcactttttg 25904741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 8226984 - 8227148
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  8226984 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 8227081  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  8227082 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaa 8227148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 18087316 - 18087457
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   ||||||||||||    
T  18087316 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaa 18087414  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    | ||||||||||||| |||||||||||| ||||||||||||||    
T  18087415 ctgcatcgaaaacggattaacggtttgatttttatgcgcgaaa 18087457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 33314761 - 33314867
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||||||||||| | ||    
T  33314761 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttatgcgcgaaatggtgaaaaacaca 33314860  T
Q  207 ctttttg 213  Q
    |||||||    
T  33314861 ctttttg 33314867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 19983751 - 19983962
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||| || || ||||||| || |||  || ||||||  || |||||||    
T  19983751 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaagat-gacttttgggatggttgaaacatgaaatttctatagatta 19983849  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt- 212  Q
    || ||||| |||||||| |||  || |||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||| ||| ||||||||||     
T  19983850 tgttagagtcaagtgtccggagcgtataggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtggaaaacgcactttttg 19983949  T
Q  213 gaaaagcagattt 225  Q
    ||||||| |||||    
T  19983950 gaaaagctgattt 19983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 16556603 - 16556801
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16556603 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16556701  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  16556702 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaaacgcactttttg 16556801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 16633159 - 16633357
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16633159 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16633257  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  16633258 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaaacgcactttttg 16633357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 23977548 - 23977390
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  23977548 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 23977450  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  23977449 gagcatgtaggcggaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 23977390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 35015617 - 35015831
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||| || || ||||||| || |||  || ||||||   |||||||||    
T  35015617 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaatat-gacttttgggatggttgaaacatgaaatttttgtagatta 35015715  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt- 212  Q
    || ||||| ||||||||| ||  || |||||||||||| |||| ||| | | ||||| ||||||| |||| ||||||||||||||||| ||||||||||     
T  35015716 tgttagagtcaagtgtcatgagcgtataggcgaaaacgacatcaaaatccgattaacagtttgaaatttacgcgcgaaatggtgaaaaacgcactttttg 35015815  T
Q  213 gaaaagcagatttctg 228  Q
    ||||||| ||||||||    
T  35015816 gaaaagctgatttctg 35015831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 22226293 - 22226399
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| || |||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||    
T  22226293 tagattatgttagagtcatgtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgca 22226392  T
Q  207 ctttttg 213  Q
    |||||||    
T  22226393 ctttttg 22226399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 31468017 - 31468154
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | |||||||||||| ||||| |||  |||||||  |  |||||||||    
T  31468017 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaatcgattttt-gggtggttgaaacttgaatttttctgtagatt 31468115  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacg 151  Q
    |||||||||  |||||||||||  |||||||| ||||||    
T  31468116 atgatagagttaagtgtcaggagcgtgtaggcaaaaacg 31468154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 23532219 - 23532304
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||| || ||||||||||   || |||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  23532219 tagattatgatagggctaagtgtcaggtgcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaa 23532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 16448014 - 16448192
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||||||||||||||| || |||  |||  || |   || ||| ||    
T  16448014 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaactgtaatttttctttagttt 16448112  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||| | |||||||||  | ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  16448113 gtgatagagctatgtgtcaggagcgcgtaggtgaaaacggcatcgaaaactggttaacggtttgatttttaggcgcgaaa 16448192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 23994465 - 23994383
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  23994465 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacagtttgatttttatgcgcgaaa 23994383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 24563162 - 24563076
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  24563162 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaa 24563076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 18003206 - 18003288
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||  |||||||||||| ||||||||||||||    
T  18003206 attatgatagtgctaagtgtaaggagcatgtaggtgaaaacggcatcgaaaacgaattaacggtttgatttttatgcgcgaaa 18003288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 13621374 - 13621424
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  13621374 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgc 13621424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 18776704 - 18776616
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||||||||||| | |||||||||||| ||||||||| ||||    
T  18776704 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgtgaaa 18776616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 25650763 - 25650695
Alignment:
Q  124 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||  |||||| ||||||||||||||||   | ||||| |||||| ||||||||||||||    
T  25650763 aagtgtcaggaacatgtaggtgaaaacggcatcgaaattagattaacagtttgatttttatgcgcgaaa 25650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 19168565 - 19168514
Alignment:
Q  173 tttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatt 224  Q
    |||||||||||  |||||||||||||||  ||||||||||||||||| ||||    
T  19168565 tttgaattttacacgcgaaatggtgaaagacgcactttttgaaaagctgatt 19168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 19102735 - 19102791
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggg 83  Q
    ||||||| |||||||||||  || ||||||||||||||| | ||| |||||||||||    
T  19102735 gtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg 19102791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 6867 - 6647
Alignment:
Q  5 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 104  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||  ||  ||||||||||||    
T  6867 aatttatgcttgaaaagtcggagtctaaacgtttttccaaacaagagattatgtgaggtttggaaa-tcgatttt-ggggtggatgagacttgaaatagc 6770  T
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| | | |||||||||||||||||| ||||||||||||||||||||    
T  6769 tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaatggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcg 6670  T
Q  205 cactttttgaaaagcagatttct 227  Q
    ||||| | || ||||||||||||    
T  6669 cacttctcgagaagcagatttct 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 7086 - 6871
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| | |||||||||    
T  7086 ttgaaaagtcggtgtctaaacgtttttccaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaattgttgtagatta 6987  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6986 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaacggtttgaattttacgcgcgaaatggtgaaaatcgcactttttg 6887  T
Q  214 aaaagcagatttctgg 229  Q
    ||||||||||||||||    
T  6886 aaaagcagatttctgg 6871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 1530 - 1684
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||  || |||  ||||||  |   | ||||||||||||||||| |||| ||||||     
T  1530 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg--tggttgaaacttgagtttttcggtagattatgatagagctaagtctcaggag 1627  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  1628 cgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgggttttatgcgcgaaa 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 52018 - 51804
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||   ||||||||| || |||  ||||||||||||| |||||||    
T  52018 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaataatttttgggatggttgagacttgaaatagctttagatta 51920  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  51919 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcgaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 51820  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||| ||||||||    
T  51819 agaagcatatttctgg 51804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 131; Significance: 4e-68; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 7670 - 7449
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  7670 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 7572  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||| |||||||   |||||||||||||||||||     
T  7571 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaatcgct 7472  T
Q  207 ctttttgaaaagcagatttctgg 229  Q
     |||||||||| |||||||||||    
T  7471 atttttgaaaaacagatttctgg 7449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 12284 - 12063
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  12284 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 12186  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||| |||||||   |||||||||||||||||||     
T  12185 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaatcgct 12086  T
Q  207 ctttttgaaaagcagatttctgg 229  Q
     |||||||||| |||||||||||    
T  12085 atttttgaaaaacagatttctgg 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 4116 - 4018
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  4116 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaat 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 8730 - 8632
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  8730 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaat 8632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 10279 - 10058
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  10279 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 10181  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||| |||||||   |||||||||||||||||||     
T  10180 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaatcgct 10081  T
Q  207 ctttttgaaaagcagatttctgg 229  Q
     |||||||||| |||||||||||    
T  10080 atttttgaaaaacagatttctgg 10058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 6724 - 6626
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  6724 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaat 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 10705551 - 10705341
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||  || |||||||||||| |||||||||||||||| ||||||||| ||||||||||| || ||| |||  ||||||||||| ||    
T  10705551 tttatgcttgaaaagtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgatttt-ggagtggttgagacttgaaatagttg 10705453  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||||||||    
T  10705452 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgca 10705353  T
Q  207 ctttttgaaaag 218  Q
    ||||||||||||    
T  10705352 ctttttgaaaag 10705341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 10919321 - 10919111
Alignment:
Q  7 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 106  Q
    |||||| ||||||||||  || |||||||||||| |||||||||||||||| ||||||||| ||||||||||| || ||| |||  ||||||||||| ||    
T  10919321 tttatgcttgaaaagtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgatttt-ggagtggttgagacttgaaatagttg 10919223  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||||||||    
T  10919222 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgca 10919123  T
Q  207 ctttttgaaaag 218  Q
    ||||||||||||    
T  10919122 ctttttgaaaag 10919111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 225
Target Start/End: Complemental strand, 15991078 - 15990868
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  15991078 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 15990980  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||| | | ||||||||| |||||||| || ||||||||||||||||||||||||||    
T  15990979 tgatagagccaagtgtcaggagagtgtagccgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaatcgcactttttg 15990880  T
Q  214 aaaagcagattt 225  Q
    | ||||||||||    
T  15990879 agaagcagattt 15990868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 9870687 - 9870902
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  ||||||||||||||||||  ||| ||||||||||||||||| |||  |||| || || |  |||  |||||||||||||||||||||    
T  9870687 ttgaaaagtcggtgtctaaacgtttttgcaagtaagggattatgtgaggtttgggaaaatgattcttaggattgttgagacttgaaatagctgtagatta 9870786  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||| || |||||||||||| |||| |||||||||||||||| ||| | | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  9870787 tgatatagtcaagtgtcaggagagtggaggcgaaaacggcatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaatcgcactttttg 9870886  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  9870887 agaagcagatttctgg 9870902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 74 - 224
Target Start/End: Original strand, 15214108 - 15214258
Alignment:
Q  74 gatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggt 173  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| | | ||||||||    
T  15214108 gattcttgggatggttgtaacttgaaatatctgtagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggt 15214207  T
Q  174 ttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatt 224  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||| ||||    
T  15214208 ttgaattttacgcgcgaaatggtcaaaaacgcactttttgaaaagctgatt 15214258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 14931364 - 14931525
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |||  |||||||  |  || ||||||    
T  14931364 ttgaaaagtcggagtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgattttt-gggtggttgaaacttgaatttttctatagatt 14931461  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 176  Q
    ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||    
T  14931462 atgatagagccaagtgtcaggagcgggtaggcgaaaacggcatcaaaaacgggttaacggtttg 14931525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 3338182 - 3337966
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  |||||||| || ||||||| ||| || |||||||||||||| |||  |||  ||| | || |||  |||| |||| |||||||||||    
T  3338182 ttgaaaagtcggtgtctaaacattcttgcaaataagggactatgtgaggtttgggaaaatgatccttgagatggttgagactttaaattgctgtagatta 3338083  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt- 212  Q
     ||||||||||||||||||||  ||||| |||||||||||| | ||| | | ||||||||| |||||||| ||||||||||||||||||||||||||||     
T  3338082 agatagagccaagtgtcaggagcgtgtaagcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttg 3337983  T
Q  213 gaaaagcagatttctgg 229  Q
    || ||||||||||||||    
T  3337982 gagaagcagatttctgg 3337966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 5682987 - 5683173
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || |||||| |||||||||||| |||||||||| ||||||||||  |||||  || ||||||  ||||||||||    
T  5682987 tgaaatgtcgaggtttaagcgttttcgccaacaagtgattatgtgaggttttggaaaat-gatttttgggaagattgaaacatgaaatttctgtagatta 5683085  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||||||||||||||||||||||||||||    
T  5683086 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 5683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 4830389 - 4830575
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||| ||||||||| || |||  ||||||| |      
T  4830389 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcaatttttggg-tggttgaaacttgaatttt 4830485  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4830486 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaa 4830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 4833684 - 4833870
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||| ||||||||| || |||  ||||||| |      
T  4833684 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcaatttttggg-tggttgaaacttgaatttt 4833780  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4833781 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaa 4833870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 2584376 - 2584572
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |      
T  2584376 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttt 2584472  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||  ||||||||    
T  2584473 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgtaaatgggttaacggtttggattttacgcgcgaaaacgtgaaaat 2584572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 6512434 - 6512273
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  ||||||| |   |||||||||    
T  6512434 ttgaaaaatcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 6512337  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 176  Q
    |||||||||| |||| ||||||   | |||||||||||||||||||||||||||||||||||||    
T  6512336 atgatagagctaagtttcaggagcatataggcgaaaacggcatcgaaaacgggttaacggtttg 6512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 15368343 - 15368171
Alignment:
Q  12 gattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtaga 110  Q
    ||||||| |||||  ||||||||||||| ||||| |||| |||||||||||||||| || |||||||||||| || |||  |||||||  |   ||||||    
T  15368343 gattgaatagtcggcgtctaaacgtttt-gcaaataagaaattatgtgaggtttggcaagtcgatttttggg-tggttgaaacttgaatctttttgtaga 15368246  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||||| || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  15368245 ttatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacggtttgatttttatg 15368171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 45314379 - 45314542
Alignment:
Q  63 tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaac 162  Q
    |||||||||| |||||||||| || |||  |||||||||  ||||||||||||||||||  |||| ||||||  ||||||||||||||| |||| ||| |    
T  45314379 tttggaaaat-gatttttgggatggttgagacttgaaatttctgtagattatgatagagttaagtatcaggatcgtgtaggcgaaaacgacatcaaaatc 45314477  T
Q  163 gggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttct 227  Q
     | |||||||||||||||||| | | ||| ||||||||| |||||||||||||||||| ||||||    
T  45314478 cgattaacggtttgaattttacgtgtgaagtggtgaaaaacgcactttttgaaaagcatatttct 45314542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 18293412 - 18293531
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| ||||    
T  18293412 tagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgca 18293511  T
Q  207 cttttt-gaaaagcagattt 225  Q
    |||||| ||||||| |||||    
T  18293512 ctttttggaaaagctgattt 18293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 54363742 - 54363907
Alignment:
Q  36 tttttgcaaacaagagattatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagga 134  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||||| || |||  |||||||||  || |||||||||||||||| |||||||| ||    
T  54363742 tttttgccaataagtgattatgtgaggttttggaaaat-aatttttgggatggttgaaacttgaaatttctatagattatgatagagctaagtgtcacga 54363840  T
Q  135 aagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
      |||||||||||||||||||| ||| |   ||||||||||||||||||||||| ||||||||||||    
T  54363841 gcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttatgcgcaaaatggtgaaaa 54363907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 16224190 - 16224020
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||||| ||||||| || |||  |||||||  |   ||||||||    
T  16224190 ttgaatagtcggtgtctaaacgttttgg-aaataagagattatgtgaggtttgggaaatcgagttttggg-tggttgaaacttgaatctttttgtagatt 16224093  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||| || |||||||||||  |||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  16224092 atgatagggctaagtgtcaggagcgtgtagacgaaaacgacatcgaaaacgggttaacggtttgatttttatg 16224020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 18168766 - 18168552
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  18168766 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 18168668  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||  |||||||||||||||| ||| |||   | ||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  18168667 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacggtatcaaaatttgattaacggtttggattttacgcgcgaaatggtgaaaaacgcactttttg 18168568  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  18168567 aagaactgatttctgg 18168552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 7132559 - 7132700
Alignment:
Q  51 gattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaac 150  Q
    ||||||||||||||| |||||  || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   |||||||||||||    
T  7132559 gattatgtgaggttttgaaaaatgacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaac 7132658  T
Q  151 ggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    || ||||||||||| |||||||||||| ||||||||||||||    
T  7132659 ggtatcgaaaacggattaacggtttgatttttatgcgcgaaa 7132700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 14281060 - 14280882
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag--ctgtagat 111  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| |||||    ||||||||    
T  14281060 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaact-gaaatttttctgtagat 14280963  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    | ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  14280962 tgtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 14280882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 15374142 - 15373972
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  |||||||  |   | ||||||    
T  15374142 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatctttttatagatt 15374045  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||  || |||||||||||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  15374044 atgataaggctaagtgtcaggaacgtgtaggtgaaaacggcatcgaaaacgggttaaccatttgatttttatg 15373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 20000502 - 20000344
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  20000502 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 20000404  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  20000403 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 20000344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 20898987 - 20899164
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| |||||||||| | | ||||||||||||| || |||   |||||| |   || ||||||    
T  20898987 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttggg-tggttgaagcttgaatttttctatagatt 20899084  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||| ||| ||  || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  20899085 atgatagagctaagtttcatgagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaa 20899164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 13447319 - 13447154
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    |||| |||| ||| |||||||||||||||   ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||  |||||||||||     
T  13447319 ttttacaaataagcgattatgtgaggttttagaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagataagtgtcaggag 13447221  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     |||||||||||||||||||| |||| |||||||| ||||| |||||| ||||||||  ||||||||    
T  13447220 cgtgtaggcgaaaacggcatcaaaaatgggttaacagtttggattttacgcgcgaaaacgtgaaaat 13447154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 4615381 - 4615469
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||| ||||||||||   ||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||    
T  4615381 ctgtagattatgatagagctaagtgtcaggtgcgtgtaggcgaaaacggcatcgaagacgagttaacggtttggtttttatgcgcgaaa 4615469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 25119760 - 25119879
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||  ||||| ||||||||||||  |||||||||||||| ||||| ||| | | |||||||||| ||||||| ||||||||||||||||| ||||    
T  25119760 tagattattttagagtcaagtgtcaggagcgtgtaggcgaaaactgcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaaacgca 25119859  T
Q  207 cttttt-gaaaagcagattt 225  Q
    |||||| ||||||| |||||    
T  25119860 ctttttggaaaagctgattt 25119879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 22354476 - 22354328
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  22354476 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 22354379  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 176  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||    
T  22354378 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttg 22354328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 27028535 - 27028383
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||| ||| ||||||| ||||| ||||| ||||||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||     
T  27028535 ttttgcaaataagggatcatgtgagttttgggaaatcaatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggag 27028437  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     || |||||||||||||||||||||||||||   |||||||| ||||||| ||||||    
T  27028436 cgtttaggcgaaaacggcatcgaaaacgggt---cggtttgatttttatgtgcgaaa 27028383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 18230551 - 18230364
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | |||| |||||||||| || |||  ||||||| |   |||||||||    
T  18230551 ttgaaaactcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaattgatttttggg-tggttgaaacttgaatttttctgtagatt 18230454  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    | |||||||| |||||||||||  || |||||||||||| |||||||||||||||||||  ||| |||||| | ||||||  ||||||||    
T  18230453 acgatagagctaagtgtcaggagcgtttaggcgaaaacgacatcgaaaacgggttaacgcattggattttaagtgcgaaaacgtgaaaat 18230364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 54798236 - 54798324
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  54798236 ctgtagattgtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgttttttaggcgcgaaa 54798324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 15371850 - 15371712
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||  |||  |||||||  |   ||||||||    
T  15371850 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgattttttgggtagttgaaacttgaatctttttgtagatt 15371752  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacgg 152  Q
    ||||||| || |||||||||||  ||||||||||||||||    
T  15371751 atgatagggctaagtgtcaggagcgtgtaggcgaaaacgg 15371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 16157515 - 16157429
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||||| || | || ||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  16157515 gtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 16157429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 15403263 - 15403184
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||||||||||| || |||||||||||  ||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  15403263 tgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacggg-taacggtttgatttttatg 15403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 30233215 - 30233303
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  30233215 ctgtacattaagatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 30233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 26921804 - 26921884
Alignment:
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||| || ||||||||||||  |||||| ||||||| |||||||||| | |||||||||||| ||||||||||||||    
T  26921804 tatgatagtgctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatgcgcgaaa 26921884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 52266227 - 52266315
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||  |||||| ||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  52266227 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaa 52266315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 19622549 - 19622711
Alignment:
Q  40 tgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaaag 137  Q
    |||||| ||| ||||||||||||||| ||||||| |||||||||| || |||  |||| || |   || |||||||||||||||  |||||| | ||  |    
T  19622549 tgcaaataagtgattatgtgaggttttggaaaat-gatttttgggatggttgaaacttcaatttttctatagattatgatagagttaagtgttaagagcg 19622647  T
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    |||||||||||||| |||| ||| | | |||||||||||||||||||  |||||||||||||||    
T  19622648 tgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttatatgcgaaatggtgaaaa 19622711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 13043296 - 13043392
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaa 200  Q
    ||||||||||||||||||  |||||| | ||  | |||||| ||||||||||||||||||| ||||  ||||| |||||| || |||||||||||||    
T  13043296 ctgtagattatgatagagttaagtgttaagagcgcgtaggcaaaaacggcatcgaaaacggattaatagtttggattttacgcacgaaatggtgaaa 13043392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 17375738 - 17375906
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtca 131  Q
    ||||||||| || ||| ||||||||||||||| ||||||| |||||||| | || |||  ||||||| |   |||||| |||||||||||| || |  ||    
T  17375738 cgtttttgccaataagtgattatgtgaggttttggaaaat-gatttttgagatggttgaaacttgaatttttctgtaggttatgatagagctaaattcca 17375836  T
Q  132 ggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    |||   ||||||| |||||| |||| |||   | ||||||| ||||||||||||||||||||||||||||    
T  17375837 ggagcatgtaggcaaaaacgacatcaaaattcgattaacggattgaattttatgcgcgaaatggtgaaaa 17375906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 15852063 - 15852146
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    |||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||  ||||| ||||||||||    
T  15852063 tgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacaatttgatttttatgcgc 15852146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 8574316 - 8574353
Alignment:
Q  155 tcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  8574316 tcgaaaacgggttaacggtttgatttttaggcgcgaaa 8574353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 16157583 - 16157538
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 82  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  16157583 ttttgcaaataagagatgatgtgagttttgggaaatcgatttttgg 16157538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 15273059 - 15273095
Alignment:
Q  156 cgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  15273059 cgaaaacggattaacggtttgatttttatgcgcgaaa 15273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 21660192 - 21659969
Alignment:
Q  5 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 104  Q
    |||||||| ||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||  |||||||||| ||||||  ||  |||||| |||||    
T  21660192 aatttatgtttgaagagtcggagtctaaacgtttttgaaaaaaagagattatgtgaggtttggggaatcgatttt-ggggtggctgagacttgagatagc 21660094  T
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||   | ||||||||| |||||||| ||||||||||||||||||||    
T  21660093 tgtagattatgatagagccaagtgccaggagagtgtaggcgaaaacgacatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaatcg 21659994  T
Q  205 cactttttgaaaagcagatttctgg 229  Q
    |||||||||| ||||||||||||||    
T  21659993 cactttttgagaagcagatttctgg 21659969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 51324312 - 51324102
Alignment:
Q  17 aaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatga 116  Q
    ||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  |||||||||||||    
T  51324312 aaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagattatga 51324213  T
Q  117 tagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaa 216  Q
    ||||||||||||||||||   |||||||||||||| |||| ||| | | |||||||||||||||||| |||||||||||||||||||||||||||| | |    
T  51324212 tagagccaagtgtcaggagcatgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgcacttttttaga 51324113  T
Q  217 agcagatttct 227  Q
    |||||||||||    
T  51324112 agcagatttct 51324102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 21239286 - 21239501
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 112  Q
    |||||||||||  ||| ||||| ||||||||| ||| |||||||||||||||| |||||| |||| || || || |||  ||||||||   |||||||||    
T  21239286 ttgaaaagtcggtgtcaaaacgattttgcaaataagggattatgtgaggtttgagaaaat-gattcttcggatggttgagacttgaaaattctgtagatt 21239384  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt 212  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  21239385 atgatagagccaagtgtcaggagcgtgtaggcaaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgcacttttt 21239484  T
Q  213 gaaaagcagatttctgg 229  Q
    ||||||| |||||||||    
T  21239485 gaaaagctgatttctgg 21239501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 20030882 - 20031097
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| ||| |||||| || |||  ||||||||| |||||||||    
T  20030882 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gatctttgggatggttgagacttgaaattgctgtagat 20030979  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || ||||||||||||||||||||  |||||||||||||||||| | ||| | | |||||| ||  ||||||| |||||||||||||||||||||||||||    
T  20030980 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacgattgaaattttacgcgcgaaatggtgaaaatcgcactttt 20031079  T
Q  212 tgaaaagcagatttctgg 229  Q
    ||| ||||||||||||||    
T  20031080 tgagaagcagatttctgg 20031097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 52984037 - 52983863
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| |||  ||||||| ||  |||||||||    
T  52984037 ttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgattttt-gggtggttgaaacttgaatatttctgtagatt 52983939  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    ||||||| || |||| |||||||  |||||| |||||||||||||||||| | |||||||||||| ||||||||||    
T  52983938 atgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgc 52983863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 18271122 - 18270948
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  18271122 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 18271025  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  18271024 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgcgaaaacgtgaaaat 18270948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 18275776 - 18275602
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  18275776 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 18275679  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  18275678 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgcgaaaacgtgaaaat 18275602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 21473602 - 21473432
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  21473602 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 21473505  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21473504 atgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatg 21473432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 18824430 - 18824253
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||| ||||| ||||| ||||||||||||||||||||| ||||| |||||| || || |||  ||||||| |   |||||||||    
T  18824430 ttgaaaagtcggtgtctaaaggtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttagg-tggttgaaacttgaatttttctgtagatt 18824333  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  18824332 atgatagagctaagtgtcaggagcgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttatgtgcgaaa 18824253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 7320835 - 7321012
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  || |||||||||||||||| ||| ||||||||||||||  | ||||||||||||||| || ||   ||||||| |  ||| ||||||    
T  7320835 ttgaaaagtcggtgtataaacgtttttgcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttaaaacttgaattttctgcagatta 7320933  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||||  ||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||    
T  7320934 tgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacggattaacggtttggattttacgcgcgaaa 7321012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 39061118 - 39060940
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| |||||||  ||| ||||| || |||  ||||| |||  ||||||||||||||||||  |||||||||||  |||||||||||||    
T  39061118 gattatgtgaggttttggaaaata-attcttgggatggttgagacttggaatttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaa 39061020  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    || |||| ||| | | ||||| |||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||    
T  39061019 cgacatcaaaatctgattaacagtttgaattttacgcgcgaaatggtaaaaaatgcactttttgaaaagcagatttctgg 39060940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 7791949 - 7792059
Alignment:
Q  119 gagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaag 218  Q
    ||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||||| |||    
T  7791949 gagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttttgagaag 7792048  T
Q  219 cagatttctgg 229  Q
    |||||||||||    
T  7792049 cagatttctgg 7792059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 21858997 - 21858872
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  21858997 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacg 21858898  T
Q  205 cacttttt-gaaaagcagatttctgg 229  Q
    |||||||| ||||||| |||||||||    
T  21858897 cactttttggaaaagctgatttctgg 21858872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 13527952 - 13528128
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  13527952 ttgaaaagtcggtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 13528048  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||  || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||    
T  13528049 atgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttacgcgcgaaa 13528128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 51476803 - 51476624
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg-gggtgattgtcacttgaaatag-ctgtagat 111  Q
    |||||||||||  ||||||||||||||| ||| ||| |||| ||||||||||||||| |||||||||  ||||| |||  ||||||| |   ||||||||    
T  51476803 ttgaaaagtcggtgtctaaacgtttttgtaaataagggattgtgtgaggtttggaaa-tcgatttttttgggtggttgaaacttgaatttttctgtagat 51476705  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||| || |||| |||||||  |||||| |||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  51476704 tatgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgagcgaaa 51476624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 228
Target Start/End: Complemental strand, 16656435 - 16656243
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 135  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  16656435 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 16656337  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca-ctttttgaaaagcagatttctg 228  Q
     ||||||||||||||| ||||  || | | |||||||||||||||||| ||||||||||||||||| |||| ||||||||||| | ||||||||    
T  16656336 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcacctttttgaaaatctgatttctg 16656243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 17004339 - 17004227
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||    
T  17004339 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgca 17004240  T
Q  207 ctttttgaaaagc 219  Q
    ||||| |||||||    
T  17004239 cttttggaaaagc 17004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 7791798 - 7791938
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| |||  ||||| || |||  ||||||||| |||||||||    
T  7791798 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggatggttgagacttgaaattgctgtagat 7791895  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggca 154  Q
    || ||||||||||||||||||||  ||||||||||||||||||    
T  7791896 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggca 7791938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 20058204 - 20058107
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||| || |||||  ||||||||    
T  20058204 tgtagattatgatagagctaactgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcacgaaaacgtgaaaat 20058107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 38055552 - 38055756
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38055552 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38055650  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  38055651 tgttagagtcaagtgtcaagatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 38055750  T
Q  214 aaaagc 219  Q
    ||||||    
T  38055751 aaaagc 38055756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 44035523 - 44035644
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||| |||||||||||||| ||||||||||||||||| ||    
T  44035523 tgtagattatgttagagtcaagtgtcaggagcgtgtaggtgaaaacgacatcaaaatccgattagcggtttgaattttacgcgcgaaatggtgaaaaacg 44035622  T
Q  205 cacttttt-gaaaagcagattt 225  Q
    |||||||| ||||||| |||||    
T  44035623 cactttttggaaaagctgattt 44035644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 18060220 - 18060406
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  18060220 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 18060318  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| |||||||||||||||||    
T  18060319 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 18060406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 17148330 - 17148189
Alignment:
Q  51 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 149  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   ||||||||||||    
T  17148330 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaa 17148232  T
Q  150 cggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    | ||||||||||||| |||||| ||||| ||||||||||||||    
T  17148231 ctgcatcgaaaacggattaacgatttgatttttatgcgcgaaa 17148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 20825463 - 20825545
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  20825463 attatgatagtgctaagtgttaggagcatgtaggcgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaa 20825545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 35054294 - 35054241
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  35054294 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 35054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 21650592 - 21650688
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaa 201  Q
    ||||||||| | ||||| ||||||| ||||  ||||||||||||||||| || ||| |   ||||||||||||||||||| || |||||||||||||    
T  21650592 tgtagattacgttagagtcaagtgtgaggagcgtgtaggcgaaaacggcgtcaaaatccaattaacggtttgaattttattcgtgaaatggtgaaaa 21650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 27330450 - 27330538
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  27330450 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggtatcgaaaacggattaacagtttgatttttatgcgcgaaa 27330538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 626 - 841
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || ||   |||||||||||||||||||||    
T  626 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttcagacttgaaatagctgtagatta 725  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||  ||||||||||| |||||||||||||||||||||| ||||||    
T  726 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacaatttgaattttacgcgcgaaatggtgaaaatcgcattttttg 825  T
Q  214 aaaagcagatttctgg 229  Q
    | ||||||||||||||    
T  826 agaagcagatttctgg 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 10995 - 11211
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||| ||||  ||||||||||    
T  10995 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgatacttaaaatttctgtagatta 11094  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaa-acgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcacttttt 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||  | | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  11095 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaattccgattaacggtttgaattttacgcgcgaaatggtgaaaatcgcacttttt 11194  T
Q  213 gaaaagcagatttctgg 229  Q
    ||||||| |||||||||    
T  11195 gaaaagctgatttctgg 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 5277 - 5492
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  5277 ttgaaaagtcggtgtctaaacgtttttacaaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgagacttgaaatttctgtagatta 5376  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||| | | ||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  5377 tgatagagccatgtgtcaggagagtgtaggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaaaccgcactttttg 5476  T
Q  214 aaaagcagatttctgg 229  Q
    |||||| |||||||||    
T  5477 aaaagctgatttctgg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 1 - 188
Alignment:
Q  42 caaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgta 141  Q
    |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  ||||||||||||||||||||| ||||||||| ||||||    
T  1 caaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgagacttgaaatttctgtagattatgatagagccatgtgtcaggagagtgta 100  T
Q  142 ggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    ||||||||||||||| ||| | | ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  101 ggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaaaccgcactttttgaaaagctgatttctgg 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 25752 - 25936
Alignment:
Q  8 ttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctg 106  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| || || |||  ||||||| |   |||    
T  25752 ttatgcttgaaaagtcgaagtctaaacgtttttgcaaataagagattatgtgaggttttggaaatcgattttttgg-tggttgaaacttgaatttttctg 25850  T
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  25851 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 25936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 3e-53; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 22470640 - 22470428
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||| |||||||    
T  22470640 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctatagatta 22470542  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    ||||||| ||||||||||||| |||||||| ||||||| |||||||| | | |||| |||| ||||||||   |||||||||||||||||||||||||||    
T  22470541 tgatagaaccaagtgtcaggagagtgtaggagaaaacgacatcgaaatccgattaatggttggaattttacctgcgaaatggtgaaaatcgcactttttg 22470442  T
Q  214 aaaagcagatttct 227  Q
    | || || ||||||    
T  22470441 agaaacaaatttct 22470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 8952278 - 8952455
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| || || |||  ||||||| |   |||||||||    
T  8952278 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttagg-tggttgaaacttgaatttttctgtagatt 8952375  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8952376 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 8952455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 20197656 - 20197792
Alignment:
Q  93 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  ||||||||||||||||||  |||||||||||  |||||||||||||||||| | ||| | | |||||||||| ||||||| ||||||||    
T  20197656 acttgaaatttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcaacaaaatccgattaacggtttaaattttacgcgcgaaa 20197755  T
Q  193 tggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20197756 tggtgaaaaacgcactttttgaaaagcagatttctgg 20197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 22777320 - 22777494
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||  | |||  |||||||  |  ||||||||||||||||||  ||    
T  22777320 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttgggcgg-ttgaaacttgaatctttctgtagattatgatagagttaa 22777417  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||| ||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  22777418 gtgtcatgagcgtgtaggcgaaaacggcatcgaaaacgggataacagtttgaattttatgcgcgaaaacgtgaaaat 22777494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 21311139 - 21311317
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||| ||||||||||| ||| ||||||||||||||  | ||||||||||||||| || | |  |||| || |   |||||||||    
T  21311139 ttgaaaagtcggtgtctaaaagtttttgcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggtcgaaactttaatttttctgtagatt 21311237  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21311238 atgatagagctaagtgtcaggagcgtataggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaa 21311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 21297596 - 21297774
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||| |||||  | ||||||||||||||| || |||  |||| || |   ||| |||||    
T  21297596 ttgaaaagtcgctgtctaaacgtttttgcaaataagtgattatgtaaggttctggaaatcgatttttggg-tggttgaaactttaatttttctggagatt 21297694  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  21297695 atgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacagtttggattttatgcgcgaaa 21297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 10778428 - 10778642
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  10778428 tgaaatgtcgatgtttaagcgttttcgccaataagtgcttatgtgaggtttaggaaaat-gagttttgggatggttgagacatgaaatttttgtagatta 10778526  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||| ||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  10778527 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttg 10778626  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  10778627 aagaactgatttctgg 10778642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 21399063 - 21399257
Alignment:
Q  35 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 133  Q
    |||||||| || ||| ||||||||||||||| || |||| |||| ||||| || |||  |||||||||  ||||||||||||||| |   ||||||||||    
T  21399063 gtttttgccaataagtgattatgtgaggttttgggaaat-gattcttgggatggttgagacttgaaatttctgtagattatgataaacttaagtgtcagg 21399161  T
Q  134 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    |  ||||||||||||||| |||| ||| | | |||||||||||||||||| |||||||||| |||||| ||||||| ||||||||| |||||||||    
T  21399162 agcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatgatgaaaaacgcacttattgaaaagctgatttctgg 21399257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 1220070 - 1220194
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||| ||  |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  1220070 tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacg 1220169  T
Q  205 cactttttgaaaagcagatttctgg 229  Q
    ||||||||||| | | |||||||||    
T  1220170 cactttttgaagaactgatttctgg 1220194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 23539586 - 23539404
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||||| |||||||||||  |||  |||| ||||||||| ||| ||||||||||||||  | ||||| |||||| ||||| |||  |||||||  ||    
T  23539586 gaatttatgtttgaaaagtcggtgtc-caacg-ttttgcaaataagtgattatgtgaggttctggaaatcaattttt-gggtggttgaaacttgaattta 23539490  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||| |||||||||| |||||| ||||    
T  23539489 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggataacggtttggattttacgcgc 23539404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 22357141 - 22357327
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |   ||||||| |    
T  22357141 ttgaaaaatcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagaat 22357238  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     ||||||||  |||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||  ||||||||    
T  22357239 -tgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgagttaacggtttggattttacgcgcgaaaacgtgaaaat 22357327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 228
Target Start/End: Complemental strand, 28901988 - 28901796
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 135  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  28901988 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 28901890  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca-ctttttgaaaagcagatttctg 228  Q
     ||||||||||||||| ||||  || | | |||||||||||||||||| ||||||||||||||||| |||| ||||||||||| | ||||||||    
T  28901889 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcacctttttgaaaatctgatttctg 28901796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 228
Target Start/End: Complemental strand, 28938383 - 28938191
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 135  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  28938383 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 28938285  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca-ctttttgaaaagcagatttctg 228  Q
     ||||||||||||||| ||||  || | | |||||||||||||||||| ||||||||||||||||| |||| ||||||||||| | ||||||||    
T  28938284 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgcacctttttgaaaatctgatttctg 28938191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 40726488 - 40726324
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  40726488 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 40726391  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  40726390 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaa 40726324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21932843 - 21933047
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  21932843 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 21932941  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||| ||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  21932942 tgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 21933041  T
Q  214 aaaagc 219  Q
    ||||||    
T  21933042 aaaagc 21933047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21939013 - 21939217
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  21939013 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 21939111  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||| ||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  21939112 tgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 21939211  T
Q  214 aaaagc 219  Q
    ||||||    
T  21939212 aaaagc 21939217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 9730932 - 9731019
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||| ||||||||| ||||   |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  9730932 tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaa 9731019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 10817621 - 10817444
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||||| |||  ||||||||||||| ||||| |||  ||||| |||||||  | ||||||||||||||| || |||  ||||||| |   || ||||||    
T  10817621 ttgaaaaatcggcgtctaaacgtttt-gcaaataagtaattatatgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctatagatt 10817524  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||| |||||||||||||| |||||| ||| ||||    
T  10817523 atgatagagctaagtgtcaggagcgtgtaggcgaaaagggcatcgaaaatgggttaacggtttggattttacgcgtgaaa 10817444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 22883546 - 22883744
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| || |||| || ||||||| || |||  || ||||||   | |||||||    
T  22883546 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgggaaat-gacttttgggatggttgaaacatgaaatttttatagatta 22883644  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  22883645 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaactcactttttg 22883744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 35581737 - 35581631
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| ||||    
T  35581737 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgca 35581638  T
Q  207 ctttttg 213  Q
    |||||||    
T  35581637 ctttttg 35581631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 36990325 - 36990431
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| ||||    
T  36990325 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgca 36990424  T
Q  207 ctttttg 213  Q
    |||||||    
T  36990425 ctttttg 36990431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 18318537 - 18318622
Alignment:
Q  107 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||| |||||||||||  | |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  18318537 tagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacaggttaacggtttgatttttaggcgcgaaa 18318622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 20765583 - 20765671
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||    
T  20765583 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaaggggttaacggtttgatttttaggcgtgaaa 20765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 22007217 - 22007303
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||||| || | || ||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22007217 gtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 22007303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 21204470 - 21204388
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  21204470 attatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 21204388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 23514265 - 23514187
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaatttta 183  Q
    ||||||||||  ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||||||||||    
T  23514265 tgtagattatcttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 23514187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 21405870 - 21405935
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttt 79  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  21405870 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttctgaaaatcgatttt 21405935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 21405937 - 21406002
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaac 170  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||  || ||||||||||||||    
T  21405937 tgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacgaaattgaaaacgggttaac 21406002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 21109444 - 21109356
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| ||| |||||| || ||||||||||||  |||||| ||||||| |||||||||| | ||||||||||||  |||||||||||||    
T  21109444 ctgtacattgtgatagggctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatatttatgcgcgaaa 21109356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 20711626 - 20711538
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||  |||||| ||||||| |||||||||| | |||||||||||| ||||||||| ||||    
T  20711626 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatgcgtgaaa 20711538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 21650213 - 21650160
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| ||||||| |||| ||||||| |||||||||||| ||||||||||||||    
T  21650213 gtaggtgaaaacgacatcaaaaacggattaacggtttgatttttatgcgcgaaa 21650160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 22111687 - 22111605
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || ||||| ||| ||  ||| || |||||||||||||||||| | ||||||| |||| ||||||| ||||||    
T  22111687 attatgatagtgctaagtgccagaaacatgtgggtgaaaacggcatcgaaaacagattaacggattgatttttatgtgcgaaa 22111605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 35288 - 35087
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 126  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||  |||| ||||| || |||  |||||||||  || ||||||||||||||||||||    
T  35288 gtctaaacgtttttgcaaataagggattatgtgaggtttcgaaaaatgattcttgggatggttgagacttgaaatttctatagattatgatagagccaag 35189  T
Q  127 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttc 226  Q
    |||||||   |||||||||||||||||||| |||   | |||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||    
T  35188 tgtcaggggcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaattttacgcacgaaatggtgaaaatcgtactttttgaaaagctgatttc 35089  T
Q  227 tg 228  Q
    ||    
T  35088 tg 35087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 843 - 1031
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |  || |||  ||||||| |      
T  843 gaatttatgtttgaaaagttggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatagatttttagt-tggttgaaacttgaatttt 941  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  942 tctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttattcgcgaaa 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 7500 - 7312
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||  ||||||| |      
T  7500 gaatttacgcttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatttt 7402  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||| | |||||||| ||  ||||||||||||||||||||||||||||||||| |||||| |||||| || |||||    
T  7401 tctgtagattatgatagatctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcacgaaa 7312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 25955 - 25757
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| |||  |||||||  |     
T  25955 gaatttacgcttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgattttt-gggtggttgaaacttgaatttt 25857  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     || |||| ||||||||||| |||||||||||  |||||||||||||||| |||||||||||||||| |||||| |||||| || |||||  ||||||||    
T  25856 tctatagaatatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacgggttaatggtttggattttacgcacgaaaaagtgaaaat 25757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 40464 - 40629
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 125  Q
    |||||||||||| |||||| ||| ||||||||||||||| | ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  40464 gtctaaacgtttatgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 40562  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  40563 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaa 40629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 3937 - 3749
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||  |||||||  |     
T  3937 gaatttatgcttgaaaagtcggagtctgaacgtttttgcaaataagagattatgtgaggtttgggaaatcga-ttttggggtggttgaaacttgaatctt 3839  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     |||||||||||||||| || |||||||||||   |||||||||||||||||||||||||   ||||||| |||| ||||||||||||||    
T  3838 tctgtagattatgatagggctaagtgtcaggaccatgtaggcgaaaacggcatcgaaaacacattaacggattgatttttatgcgcgaaa 3749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 2227 - 2415
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 102  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||  |||| |||  |||||||  |     
T  2227 gaatttatgcttgaaaagtcgaagtctaaacgtttttgaaaataagagattatgtgaggtttgggaaatcaattttt-aggtggttgaaacttgaatttt 2325  T
Q  103 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     || |||||||||||||||| |||||| ||||   |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  2326 tctatagattatgatagagctaagtgtaaggagcatgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgagaaa 2415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 8545 - 8361
Alignment:
Q  35 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 133  Q
    ||||||||||| ||| ||||||||||||||| ||||||| |||||||||| || |||  || ||||||  ||||||| ||||||||||  ||||||||||    
T  8545 gtttttgcaaataagtgattatgtgaggttttggaaaat-gatttttgggatggttgaaacatgaaatttctgtagactatgatagagttaagtgtcagg 8447  T
Q  134 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagc 219  Q
    |  | |||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  8446 agcgcgtaggcgaaaacggcatttaaaacaggttaacggtttgaattttacgcgcgaaatggtgaaaagcacactttttgaaaagc 8361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 16340 - 16519
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggg-gtgattgtcacttgaaatag-ctgtagat 111  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  | ||| |||  ||||||| |   ||||||||    
T  16340 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgatttttttgtgtggttgaaacttgaatttttctgtagat 16438  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  16439 tatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacggattaacggtttggtttttatgcgcgaaa 16519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 229
Target Start/End: Complemental strand, 28339 - 28145
Alignment:
Q  35 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 133  Q
    |||||||| || ||| || |||||||||||| || |||| |||| ||||| || |||  |||| ||||  ||||||||||||||||||  ||||||||||    
T  28339 gtttttgccaataagtgactatgtgaggttttgggaaat-gattcttgggatggttgagactttaaatctctgtagattatgatagagttaagtgtcagg 28241  T
Q  134 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttctgg 229  Q
    |   ||||||||||||||||||  ||| | | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28240 agcatgtaggcgaaaacggcattaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaaacgcactttttgaaaagcagatttctgg 28145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 21781 - 21579
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 126  Q
    ||||||||||| ||||||| ||| |||||||||||||||||  ||   ||| || || || |||  ||||||||| | ||||||||| ||||||||||||    
T  21781 gtctaaacgttcttgcaaataagggattatgtgaggtttggggaaattattcttcggatggttgatacttgaaattgttgtagattaagatagagccaag 21682  T
Q  127 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatttc 226  Q
    ||||||||  ||| |||||||||||  | | ||| | | |||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  21681 tgtcaggagcgtggaggcgaaaacgagaccaaaatccgattaacggtttgaattttacgcgtgaaatggtgaaaatcgcactttttgagaagcagatttc 21582  T
Q  227 tgg 229  Q
    |||    
T  21581 tgg 21579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 29793 - 29578
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  |||||||| |||| ||||| |||||| ||||||||||||||  ||||| |||  |||||  | |||  |||||||||  ||||||||    
T  29793 ttgaaaagtcggtgtctaaacatttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggacggttgagacttgaaatttctgtagat 29696  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || ||||||||| ||||||||||  ||||||||||||||| || | ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||    
T  29695 taagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttt 29596  T
Q  212 tgaaaagcagatttctgg 229  Q
    ||| ||||||||||||||    
T  29595 tgagaagcagatttctgg 29578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 35258 - 35043
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 111  Q
    |||||||||||  |||||||| |||| ||||| |||||| ||||||||||||||  ||||| |||  |||||  | |||  |||||||||  ||||||||    
T  35258 ttgaaaagtcggtgtctaaacatttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggacggttgagacttgaaatttctgtagat 35161  T
Q  112 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttt 211  Q
    || ||||||||| ||||||||||  ||||||||||||||| || | ||| | | ||||||||| |||||||| |||||||||||||||||||||||||||    
T  35160 taagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaatcgcactttt 35061  T
Q  212 tgaaaagcagatttctgg 229  Q
    ||| ||||||||||||||    
T  35060 tgagaagcagatttctgg 35043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 35781 - 35958
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||| |||||||| ||| |  || |||  ||||||| ||  |||||||||    
T  35781 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagataatgtgaggtttgggaaatcgatatttaga-tggttgaaacttgaatatttctgtagatt 35878  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  35879 atgatagagataagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 35958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 147443 - 147257
Alignment:
Q  4 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 103  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||||||| ||||| || |||  ||||||| |      
T  147443 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcgattgttggg-tggttgaaacttgaatttt 147347  T
Q  104 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
     ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  147346 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaa 147257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 87845 - 87757
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  87845 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 87757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 2085 - 2277
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||||||||   ||||||||||||||||||| ||| ||||||||||||||||| |||    || ||||| || |||  ||||||||| |||||||||||    
T  2085 ttgaaaagtcagtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaattcttcttgggatggttgagacttgaaattgctgtagatta 2184  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgca 206  Q
    |||||||||||||||||||||  ||||||||||| |||||||| |||   | |||||||||||||||||| | || |||| ||||||| ||||    
T  2185 tgatagagccaagtgtcaggagcgtgtaggcgaagacggcatcaaaattcgattaacggtttgaattttacgtgcaaaatagtgaaaaacgca 2277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 60216 - 60051
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||||||||| || |||||||||||     
T  60216 ttttgcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagtgctaagtgtcaggag 60118  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
     ||||||||||||||||||||||||||||||||||||||||  |||||  |||||||  ||||||||    
T  60117 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttactcgcgaaaacgtgaaaat 60051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 75602 - 75414
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| ||||||||||| || |||  ||||||| |   |||||||||    
T  75602 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccgatttttggg-tggttgaaacttgaatttttctgtagatt 75504  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    || ||||||| || ||||||||  | |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||  ||||||||    
T  75503 attatagagctaaatgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaat 75414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 72755 - 72564
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag----ctgtag 109  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| ||||||||||| || |||  ||||||  |      ||||||    
T  72755 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccgatttttggg-tggttgaaacttgatttttttttctgtag 72657  T
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| ||||||| |||||||||||  |||||||||||||||| || |||||||||||||| ||||| |||||| ||||||||  ||||||||    
T  72656 attattatagagctaagtgtcaggagcgtgtaggcgaaaacggtattgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaat 72564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 187612 - 187658
Alignment:
Q  146 aaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||| |||||||||||| |||||  |||||||    
T  187612 aaaacggcatcgaaaacggattaacggtttgatttttacacgcgaaa 187658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 16164 - 16044
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  16164 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaagcg 16065  T
Q  205 cactttttgaaaagcagattt 225  Q
    ||||||||||||||| |||||    
T  16064 cactttttgaaaagctgattt 16044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 19609 - 19729
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||||||||||  |||||||||||||||| ||    
T  19609 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaaacg 19708  T
Q  205 cactttttgaaaagcagattt 225  Q
    ||||||||||||||| |||||    
T  19709 cactttttgaaaagctgattt 19729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 1000 - 824
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || |||  |||||||  |  |||||||||    
T  1000 ttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaa-tcgatttttggg-tggttgaaacttgaatctttctgtagatt 903  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||| || |||||||||||   |||||| ||||| |||||||||||| | ||||| |||||| ||||||||||||||    
T  902 atgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacagattaacagtttgatttttatgcgcgaaa 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 6635 - 6754
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgc 205  Q
    |||||||| | ||||| ||||||||||||| |||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| |||    
T  6635 gtagattaagttagagtcaagtgtcaggaacgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgc 6734  T
Q  206 actttttgaaaagcagattt 225  Q
    |||||| ||||||| |||||    
T  6735 acttttggaaaagctgattt 6754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 18658 - 18481
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  |||| |||||||| ||||| ||| |||| |||||||||| | | ||||||||||||| || |||  ||||||| |   |||||||||    
T  18658 ttgaaaagtcggtgtctgaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttggg-tggttgaaacttgaatttttctgtagatt 18561  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  18560 atgatagagccaagtgtcaggagtgtttaggcgaaaacggcatcgaaaatgggttaacggtttgatttttatgtgcgaaa 18481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 14468 - 14414
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  14468 tgtaggtgaaaacggcatagaaaacggattaacggtttgatttttatgcgcgaaa 14414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 26462 - 26347
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatc 203  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||||||||| |||   | |||||||||||||||||| |||||||||||||||||||    
T  26462 ctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaattttacgcgcgaaatggtgaaaatc 26363  T
Q  204 gcactttttgaaaagc 219  Q
     |||||||||||||||    
T  26362 acactttttgaaaagc 26347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 751 - 931
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 110  Q
    ||||||||||   ||||||||||||||||||| |||| || |||||||||||||||| |||||||||   || || |||  |||| || |   |||||||    
T  751 ttgaaaagtcagtgtctaaacgtttttgcaaataagatatcatgtgaggtttggaaa-tcgattttttttggatggttgaaactttaatttttctgtaga 849  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  850 ttatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcacgaaa 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 7593 - 7681
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  7593 ctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcacgaaa 7681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 3690 - 3510
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaa-atagctgtaga 110  Q
    |||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||   ||||  |||  ||||||| ||  || | ||    
T  3690 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagatcatgtgaggtttgggaaatcgattttttttgggtagttgaaacttgaatatttcttttga 3592  T
Q  111 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  3591 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacgatttggtttttatacgcgaaa 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 3253 - 3424
Alignment:
Q  53 ttatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacg 151  Q
    |||||||||| |||||||||| |||| ||||| || |||  |||||||||  ||| ||||||||||| | |||||||||||||   |||||||||||| |    
T  3253 ttatgtgaggttttggaaaat-gattattgggatggttgaaacttgaaatttctgaagattatgataaatccaagtgtcaggagcatgtaggcgaaaatg 3351  T
Q  152 gcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagatt 224  Q
    ||||| ||| | | |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  3352 gcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaaacgcactttttgaaaagctgatt 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 682 - 859
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    ||||| |||||  ||||||||||||| ||||| ||| ||||||||||| ||| | ||||||||||||||| || |||  ||||||| |   || ||||||    
T  682 ttgaagagtcggtgtctaaacgtttt-gcaaataagcgattatgtgagattttggaaatcgatttttggg-tggttgaaacttgaatttttctatagatt 779  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  780 atgatagagctaagtgtcaggagcgtttaggcgaaaacgacatcgaaaacgggttaacggtttgatttttatgtgcgaaa 859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 113209 - 113387
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||| |||  | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  113209 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgatgttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 113307  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||| || |||||| |||||  |||||| ||||||||||||||||||   |||| ||||||||||||||||||||||    
T  113308 atgatagggctaagtgtgaggaacatgtaggtgaaaacggcatcgaaaacaaattaatggtttgaattttatgcgcgaaa 113387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 118056 - 118221
Alignment:
Q  27 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 125  Q
    ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||||||||| || ||    
T  118056 gtctaaacgtttttgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagggctaa 118154  T
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||| |||||  |||||| ||||||| ||||||||||   |||||||| ||| ||||||||||||||    
T  118155 gtgtgaggaacatgtaggtgaaaacgacatcgaaaacaaattaacggtatgatttttatgcgcgaaa 118221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 25433 - 25486
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  25433 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 25486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 94518 - 94426
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||| ||||||  ||||||||||||||  ||||||||    
T  94518 attaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaaaggtttggtttttatgcgcgaaaatgtgaaaat 94426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 79498 - 79284
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  79498 tgaaatgtcgatgtttaagcgttttcgccaataagtgtttatgtgaggttttggaaaat-gacttttgggttggttgaaacatgaaatttttgtagatta 79400  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||| ||||  |||||||||||||||||||| ||| ||| ||||| |||||||||||| ||||||||| || |||| | |||||||||    
T  79399 tgttagagtcaagtgttaggagcgtgtaggcgaaaacggcatcaaaatcggattaacagtttgaattttacgcgcgaaattgttaaaaacacactttttg 79300  T
Q  214 aaaagcagatttctgg 229  Q
    |||||| |||||||||    
T  79299 aaaagctgatttctgg 79284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 40230 - 40118
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||    
T  40230 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgttttgaattttacgcgcgaaatggtgaaaaacg 40131  T
Q  205 cactttttgaaaa 217  Q
    |||||||||||||    
T  40130 cactttttgaaaa 40118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 45713 - 45601
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||    
T  45713 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgatttgaattttacgcgcgaaatggtgaaaaacg 45614  T
Q  205 cactttttgaaaa 217  Q
    |||||||||||||    
T  45613 cactttttgaaaa 45601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 1000 - 1108
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  |||| ||||||||||||||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  1000 tgtagattatgttagagtcaagtgtcaggagtgtgtgggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacg 1099  T
Q  205 cactttttg 213  Q
    |||||||||    
T  1100 cactttttg 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 5479 - 5392
Alignment:
Q  115 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||| ||||||||||||  ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||  ||||||||    
T  5479 gatagagctaagtgtcaggaacatgtaggcaaaaacggcattgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaaaat 5392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 166794 - 166917
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||| |||||||||| |||||||||||||||||  |    
T  166794 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatctgattaacggcttgaattttacgcgcgaaatggtgaaaaatg 166893  T
Q  205 cactttttgaaaagcagatttctgg 229  Q
    ||| ||||||||||| |||||||||    
T  166894 cac-ttttgaaaagctgatttctgg 166917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 3703 - 3526
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| ||||||||||   | | ||||||||||| || |||  ||||||| |   |||||||||    
T  3703 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttatacaacgatttttggg-tggttgaaacttgaatttttctgtagatt 3606  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||||  || |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  3605 atgatagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaatgggttaacggtttgatttttatgtgcgaaa 3526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 31103 - 30905
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  31103 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 31005  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||| ||||||| |||||||||||    
T  31004 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaaacgcactttttg 30905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 154468 - 154682
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  154468 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 154566  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||| ||||| ||  ||||||| |||||||||||| ||| | | |||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  154567 tgttagagtcaaatgtcaagagcgtgtaggagaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaattgtgaaaaacgcactttttg 154666  T
Q  214 aaaagcagatttctgg 229  Q
    || | | |||||||||    
T  154667 aagaactgatttctgg 154682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 4514 - 4340
Alignment:
Q  14 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 112  Q
    |||||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  4514 ttgaaaagtcggtgtctaaacgtttt-gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 4417  T
Q  113 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| |||||||||    || ||||| |||||||||| |||||||||||||| |||||| ||||||| ||||||    
T  4416 atgatagagctaagtgtcagc---gtttaggcaaaaacggcattgaaaacgggttaacagtttgatttttatgtgcgaaa 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 38897 - 38693
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38897 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38799  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttg 213  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||||||||||| ||||||||| |    
T  38798 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaaacgcacttttgg 38699  T
Q  214 aaaagc 219  Q
    ||||||    
T  38698 aaaagc 38693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 1788 - 1978
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    ||||||||| || ||| ||| ||||||||||| ||||||| |||||||| | || |||  || ||||||  || ||||||||| | ||| | ||||||||    
T  1788 cgtttttgccaataagtgatgatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctctagattatgttggagtctagtgtcag 1886  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||  |||||||||||| ||||||| ||| | | |||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  1887 gagcgtgtaggcgaaa-cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgaactttttgaaaagctgattt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 10043 - 10233
Alignment:
Q  34 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 132  Q
    ||||||||| || ||| ||| ||||||||||| ||||||| |||||||| | || |||  || ||||||  || ||||||||| | ||| | ||||||||    
T  10043 cgtttttgccaataagtgatgatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctctagattatgttggagtctagtgtcag 10141  T
Q  133 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||  |||||||||||| ||||||| ||| | | |||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  10142 gagcgtgtaggcgaaa-cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaaacgaactttttgaaaagctgattt 10233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 17511 - 17658
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaagtgtcaggaa 135  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||| || |||  |||||||  |   ||||||||||||||| || || ||| ||||     
T  17511 ttttggaaataagagattatgtgaggtttgggaaatcgattattggg-tggttgaaacttgaatctttttgtagattatgatagggctaa-tgttaggag 17608  T
Q  136 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17609 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatg 17658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 31830 - 31951
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| |||||| |||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  31830 tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaaacg 31929  T
Q  205 cacttttt-gaaaagcagattt 225  Q
    | |||||| ||||||| |||||    
T  31930 ccctttttggaaaagctgattt 31951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 41014 - 40893
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| |||||| |||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||||||||||||||||| ||    
T  41014 tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaaacg 40915  T
Q  205 cacttttt-gaaaagcagattt 225  Q
    | |||||| ||||||| |||||    
T  40914 ccctttttggaaaagctgattt 40893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 33212 - 33092
Alignment:
Q  105 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaatcg 204  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||| | |||| ||| | | |||||||||  ||||||| ||||||||||| ||||| ||    
T  33212 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaatgacatcaaaatccgattaacggttccaattttacgcgcgaaatggcgaaaaacg 33113  T
Q  205 cactttttgaaaagcagattt 225  Q
    ||||||||||||||| |||||    
T  33112 cactttttgaaaagctgattt 33092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 72378 - 72290
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  72378 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttaggcgcgaaa 72290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 8858 - 8772
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||||||  |||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8858 gtagattatgatagagctatgtctcaggagcgtgtagacgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 6667 - 6620
Alignment:
Q  145 gaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  6667 gaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaa 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 8926 - 8881
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 82  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  8926 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg 8881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 146148 - 146050
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||| |||| ||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  146148 ctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaat 146050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 928 - 764
Alignment:
Q  38 tttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaaa 136  Q
    |||||||| ||| ||||||||||||||  | ||||||||| ||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||      
T  928 tttgcaaataagtgattatgtgaggttctggaaatcgattgttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 830  T
Q  137 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||| ||||||||||||| || |||||||  ||||| |||| |||  ||||||||    
T  829 gtgtaggcgaaaacgacatcgaaaacgggctagcggtttggcttttacgcgcaaaaacgtgaaaat 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 143 - 231
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||||| |||||| |||||||||||  |||||||| |||||| |||| ||||||||||||||||||| |||||||||| ||||    
T  143 ctgtagattatgttagagctaagtgtcaggagcgtgtaggcaaaaacgacatcaaaaacgggttaacggtttggattttatgcgtgaaa 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 14099 - 14181
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14099 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 14181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 22106 - 22142
Alignment:
Q  156 cgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  22106 cgaaaacggattaacggtttgatttttatgcgcgaaa 22142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 76909 - 76821
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||| || |||||||| |||  |||||| |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  76909 ctgtacattatgatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaa 76821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 1210 - 1151
Alignment:
Q  166 ttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  1210 ttaacggtttgaattttacgcgcgaaatggtgaaaaacgcactttttgaaaagctgattt 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 5603 - 5517
Alignment:
Q  106 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||||||| | || ||||||   ||||| |||||||||||||||||||||||||||||||||  |||||||| |||||    
T  5603 gtagattatgatagagctatgtctcaggagcatgtagacgaaaacggcatcgaaaacgggttaacggtttggtttttatgctcgaaa 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 5671 - 5626
Alignment:
Q  37 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 82  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  5671 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg 5626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 18117 - 18195
Alignment:
Q  124 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||  ||||||||    
T  18117 aagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgtaaacgtgaaaat 18195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 16107 - 16031
Alignment:
Q  126 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||  ||||||||    
T  16107 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgagaaaacgtgaaaat 16031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 117149 - 117065
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    ||||||||| ||||||||| | |||||||||  | |||||||||||| |||||| ||||||||||||||||||| ||||| ||||    
T  117149 ctgtagattgtgatagagctatgtgtcaggagcgcgtaggcgaaaacagcatcgtaaacgggttaacggtttgatttttaggcgc 117065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 1719 - 1772
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1719 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaa 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 55119 - 55042
Alignment:
Q  115 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||| ||||||||||| ||||  ||||| ||||||||||||| |||| | |||||||||||| ||||||||||||||    
T  55119 gatagggccaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacagattaacggtttgatttttatgcgcgaaa 55042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 10219 - 10295
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgc 186  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  10219 attatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgc 10295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 705 - 777
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 176  Q
    ||||| |||| |||||||| |||||||||||  |||||||||||||||||||| ||||||| ||||| |||||    
T  705 ctgtacattaagatagagctaagtgtcaggagcgtgtaggcgaaaacggcatccaaaacggattaactgtttg 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 11368 - 11427
Alignment:
Q  166 ttaacggtttgaattttatgcgcgaaatggtgaaaatcgcactttttgaaaagcagattt 225  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| |||||||||| |||||    
T  11368 ttaacagtttgaattttacgcgcgaaatggtgaaaaacgcactgtttgaaaagctgattt 11427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 1990 - 2125
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||||  ||||||| | || |||  || ||||||  ||||||||||    
T  1990 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatt-atttttgagatggttgaaacatgaaatttctgtagatta 2088  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaac 150  Q
    || ||||| ||||||||||||  ||||||||||||||    
T  2089 tgttagagtcaagtgtcaggagcgtgtaggcgaaaac 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 9135 - 9270
Alignment:
Q  15 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 113  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||||  ||||||| | || |||  || ||||||  ||||||||||    
T  9135 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatt-atttttgagatggttgaaacatgaaatttctgtagatta 9233  T
Q  114 tgatagagccaagtgtcaggaaagtgtaggcgaaaac 150  Q
    || ||||| ||||||||||||  ||||||||||||||    
T  9234 tgttagagtcaagtgtcaggagcgtgtaggcgaaaac 9270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 6728 - 6796
Alignment:
Q  124 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaa 192  Q
    ||||||||||||  |||||  ||||||| |||||||||| | |||||||||||| ||||||||||||||    
T  6728 aagtgtcaggaacatgtagttgaaaacgacatcgaaaacagattaacggtttgatttttatgcgcgaaa 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 23216 - 23308
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||||||||||  ||||| ||||||||  ||||||||    
T  23216 attaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttggtttttacgcgcgaaaacgtgaaaat 23308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 147086 - 147022
Alignment:
Q  138 tgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||| | ||||||  ||||||||    
T  147086 tgtaggtgaaaacggcatcgaaaacgggttaacgatttggattttacgtgcgaaaacgtgaaaat 147022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 16171 - 16246
Alignment:
Q  104 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaat 179  Q
    |||||||||||| ||||| ||||||||| ||  |||||||||||||||||||| ||| | | ||||| ||||||||    
T  16171 ctgtagattatgttagagtcaagtgtcacgagcgtgtaggcgaaaacggcatcaaaatccgattaacagtttgaat 16246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 14818 - 14774
Alignment:
Q  158 aaaacgggttaacggtttgaattttatgcgcgaaatggtgaaaat 202  Q
    ||||||||||||||||||| |||||| ||||||||  ||||||||    
T  14818 aaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 14774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 1776 - 1730
Alignment:
Q  139 gtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatg 185  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||||    
T  1776 gtaggcgaaaacggaatcaaaaacgggttaacggtttaaattttatg 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 10676 - 10754
Alignment:
Q  110 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttgaattttatgcgc 188  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||| ||||||| |||||||||||| ||||||||||    
T  10676 attaagatagggctaagtgtcatgaacaagtaggtgaaaacggcatcaaaaacggattaacggtttgatttttatgcgc 10754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University