View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10052_low_17 (Length: 307)
Name: NF10052_low_17
Description: NF10052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10052_low_17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 46 - 307
Target Start/End: Complemental strand, 30016545 - 30016284
Alignment:
| Q |
46 |
ctagggaaaacaaaaccacatttaagcacgtgtggtgtgggatcaccacacctcatcattttccaccactatttttagcattggctaccaccattaaaat |
145 |
Q |
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| T |
30016545 |
ctagggaaaacaaaaccacatttaagcacgtgtggtgtgggatcaccacacctcatcattttccaccactatttttagcattggctaccaccattaaaat |
30016446 |
T |
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| Q |
146 |
aaatatgatattatctatatctctacaaatataacctctannnnnnnacccagattaggtttattaatttgtcttatttcattgttactattttactctt |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30016445 |
aaatatgatattatctatatctctacaaatataacctctatttttttactcagattaggtttattaatttgtcttatttcattgttactattttactctt |
30016346 |
T |
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| Q |
246 |
aatttgttacaaagtttccctacatcttatagtcaattattttcggttttattagttaaatt |
307 |
Q |
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||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
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| T |
30016345 |
aatttgttacaaagtttccctacatcttatagtaaattgttttcggttttattagttaaatt |
30016284 |
T |
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