View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10052_low_21 (Length: 257)
Name: NF10052_low_21
Description: NF10052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10052_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 17257475 - 17257237
Alignment:
| Q |
18 |
atggagaggtcaacttgttacttaaaacccatttttaagatagattatttatcgcatctaccacctcttctacttttgaaaccttaaagt-aaagatgtg |
116 |
Q |
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| T |
17257475 |
atggagaggtcaacttgttacctaaaacccatttttaagatagattatttatcgcatctaccacctcttctactttggaaaccttaaagttaaagatgcg |
17257376 |
T |
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| Q |
117 |
atcatttctagtctttcaaatgagtcaggacacatgtcaaaccatacaatgaatgttgatatcaccaatgaggtccttacggtgacggtgggagttgaac |
216 |
Q |
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| T |
17257375 |
atcatttctagcctttcaaatgagtctggacacatgtcaaaccatacaatgaatgttgatatcaccaacgaggtcgttacgttgacggtgggagttgaac |
17257276 |
T |
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| Q |
217 |
atgtacttttatggagtataaatcaactatttacctttg |
255 |
Q |
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| T |
17257275 |
atgtacttttatggagtataaatcaactatttacctttg |
17257237 |
T |
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