View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10053_low_2 (Length: 572)

Name: NF10053_low_2
Description: NF10053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10053_low_2
NF10053_low_2
[»] chr7 (60 HSPs)
chr7 (18-344)||(22268312-22268635)
chr7 (344-522)||(16933132-16933311)
chr7 (344-522)||(16938515-16938694)
chr7 (345-524)||(30884109-30884288)
chr7 (345-524)||(46358520-46358699)
chr7 (344-525)||(763696-763877)
chr7 (344-524)||(31660068-31660248)
chr7 (345-524)||(47340146-47340326)
chr7 (360-525)||(35736963-35737128)
chr7 (345-524)||(41910999-41911175)
chr7 (345-434)||(20000651-20000740)
chr7 (446-525)||(46572568-46572647)
chr7 (446-518)||(48692021-48692093)
chr7 (446-524)||(32685839-32685917)
chr7 (446-523)||(15973856-15973933)
chr7 (345-411)||(5757386-5757452)
chr7 (348-413)||(11732645-11732710)
chr7 (349-413)||(34875493-34875557)
chr7 (348-406)||(24359874-24359932)
chr7 (470-524)||(34228600-34228654)
chr7 (345-413)||(44141249-44141317)
chr7 (477-524)||(48830601-48830648)
chr7 (476-525)||(11732036-11732085)
chr7 (345-413)||(15974934-15975001)
chr7 (476-524)||(24360756-24360804)
chr7 (345-413)||(39007647-39007715)
chr7 (475-523)||(46025060-46025108)
chr7 (479-525)||(12286723-12286769)
chr7 (345-411)||(30428873-30428938)
chr7 (475-525)||(33798733-33798783)
chr7 (345-411)||(46024027-46024092)
chr7 (344-413)||(25778836-25778904)
chr7 (475-531)||(44426586-44426642)
chr7 (478-517)||(12279752-12279791)
chr7 (478-517)||(15974955-15974994)
chr7 (475-518)||(26945714-26945757)
chr7 (478-517)||(30428880-30428919)
chr7 (475-518)||(38837729-38837772)
chr7 (475-518)||(44426799-44426842)
chr7 (453-518)||(48306331-48306392)
chr7 (345-402)||(6797394-6797451)
chr7 (477-518)||(46004537-46004578)
chr7 (343-408)||(48690893-48690957)
chr7 (478-517)||(12279648-12279687)
chr7 (475-518)||(31365272-31365315)
chr7 (475-518)||(34227677-34227720)
chr7 (475-518)||(43742250-43742293)
chr7 (345-395)||(48305237-48305285)
chr7 (478-517)||(48690902-48690941)
chr7 (345-411)||(10555949-10556014)
chr7 (345-411)||(27335629-27335694)
chr7 (477-518)||(924498-924539)
chr7 (477-518)||(7845099-7845140)
chr7 (477-518)||(34227878-34227919)
chr7 (477-518)||(41065971-41066012)
chr7 (347-408)||(46346719-46346780)
chr7 (478-510)||(28396736-28396768)
chr7 (343-395)||(45402886-45402938)
chr7 (448-476)||(46025013-46025041)
chr7 (345-411)||(46573500-46573563)
[»] scaffold0045 (1 HSPs)
scaffold0045 (345-525)||(33684-33864)
[»] chr6 (53 HSPs)
chr6 (345-524)||(1449542-1449721)
chr6 (349-524)||(6900807-6900982)
chr6 (345-524)||(15493174-15493353)
chr6 (345-525)||(7089082-7089262)
chr6 (345-525)||(31216662-31216842)
chr6 (345-493)||(1536814-1536962)
chr6 (425-524)||(34869950-34870049)
chr6 (167-344)||(26621413-26621591)
chr6 (167-344)||(26727392-26727570)
chr6 (346-426)||(34870071-34870151)
chr6 (450-525)||(878365-878440)
chr6 (348-406)||(30908655-30908713)
chr6 (477-524)||(7765406-7765453)
chr6 (344-411)||(35119238-35119300)
chr6 (473-522)||(30909437-30909486)
chr6 (446-495)||(35121490-35121538)
chr6 (344-408)||(33346374-33346437)
chr6 (348-403)||(7764444-7764499)
chr6 (476-517)||(15034992-15035033)
chr6 (479-524)||(18755658-18755703)
chr6 (446-495)||(33345360-33345408)
chr6 (347-411)||(18611190-18611254)
chr6 (473-520)||(4101964-4102011)
chr6 (478-517)||(12394399-12394438)
chr6 (478-517)||(33346390-33346429)
chr6 (359-413)||(4338618-4338672)
chr6 (359-413)||(16968021-16968075)
chr6 (476-518)||(19284372-19284414)
chr6 (476-518)||(21384990-21385032)
chr6 (446-480)||(24736574-24736608)
chr6 (446-480)||(24736610-24736644)
chr6 (477-518)||(10588955-10588996)
chr6 (477-518)||(22857489-22857530)
chr6 (348-404)||(12394387-12394442)
chr6 (350-402)||(27079939-27079991)
chr6 (475-518)||(14237779-14237822)
chr6 (471-510)||(18612358-18612397)
chr6 (477-520)||(20522668-20522711)
chr6 (477-520)||(20522850-20522893)
chr6 (475-518)||(22857677-22857720)
chr6 (376-411)||(24737691-24737726)
chr6 (475-518)||(25119470-25119513)
chr6 (372-411)||(29157252-29157291)
chr6 (476-518)||(10698578-10698620)
chr6 (345-411)||(15034975-15035040)
chr6 (345-411)||(22042300-22042365)
chr6 (345-411)||(28116828-28116893)
chr6 (479-525)||(28132783-28132829)
chr6 (345-411)||(34399641-34399706)
chr6 (477-518)||(19281284-19281325)
chr6 (477-518)||(25119107-25119148)
chr6 (345-394)||(32556344-32556393)
chr6 (485-517)||(34399648-34399680)
[»] chr4 (100 HSPs)
chr4 (345-525)||(11785974-11786154)
chr4 (345-525)||(11798141-11798321)
chr4 (345-525)||(49425943-49426123)
chr4 (345-521)||(13635615-13635791)
chr4 (345-524)||(15051023-15051202)
chr4 (345-520)||(30597699-30597874)
chr4 (345-510)||(51921166-51921331)
chr4 (344-524)||(49492399-49492579)
chr4 (344-524)||(53441319-53441499)
chr4 (345-524)||(27865624-27865803)
chr4 (345-525)||(46672439-46672618)
chr4 (345-508)||(35291451-35291614)
chr4 (345-489)||(1621875-1622020)
chr4 (343-495)||(36011841-36011993)
chr4 (345-495)||(55765481-55765631)
chr4 (167-341)||(9277999-9278176)
chr4 (446-526)||(45256866-45256946)
chr4 (447-522)||(50644642-50644717)
chr4 (446-516)||(638965-639035)
chr4 (446-524)||(10473619-10473697)
chr4 (446-523)||(26577257-26577334)
chr4 (345-417)||(10472497-10472569)
chr4 (345-424)||(26578176-26578255)
chr4 (347-424)||(38244946-38245023)
chr4 (446-518)||(51836328-51836400)
chr4 (345-413)||(25574126-25574194)
chr4 (473-525)||(30358835-30358887)
chr4 (348-411)||(1729615-1729678)
chr4 (348-402)||(20861583-20861637)
chr4 (348-406)||(30357810-30357868)
chr4 (349-406)||(38010145-38010202)
chr4 (473-524)||(22180201-22180252)
chr4 (349-413)||(16298925-16298989)
chr4 (347-407)||(24686574-24686634)
chr4 (343-411)||(45255973-45256040)
chr4 (345-413)||(50643743-50643810)
chr4 (352-391)||(805109-805148)
chr4 (475-525)||(25715637-25715687)
chr4 (345-411)||(26447412-26447477)
chr4 (345-411)||(27764240-27764305)
chr4 (475-517)||(33883483-33883525)
chr4 (349-411)||(36621701-36621762)
chr4 (348-413)||(22181243-22181307)
chr4 (475-520)||(54895583-54895628)
chr4 (446-486)||(38245889-38245929)
chr4 (372-411)||(4168384-4168423)
chr4 (475-518)||(8165763-8165806)
chr4 (475-518)||(17109918-17109961)
chr4 (475-518)||(21995671-21995714)
chr4 (478-517)||(22181264-22181303)
chr4 (478-517)||(27764247-27764286)
chr4 (475-518)||(30779344-30779387)
chr4 (478-517)||(36621720-36621759)
chr4 (475-518)||(36924242-36924285)
chr4 (475-518)||(37059712-37059755)
chr4 (478-517)||(45255982-45256021)
chr4 (478-517)||(50643750-50643789)
chr4 (475-518)||(53865243-53865286)
chr4 (476-518)||(1492673-1492715)
chr4 (347-413)||(29826604-29826669)
chr4 (476-518)||(33819692-33819734)
chr4 (479-525)||(50070713-50070759)
chr4 (475-524)||(1728620-1728669)
chr4 (477-518)||(2124345-2124386)
chr4 (477-518)||(6841822-6841863)
chr4 (476-517)||(8157290-8157331)
chr4 (477-518)||(9813147-9813188)
chr4 (477-518)||(31763110-31763151)
chr4 (475-516)||(36309419-36309460)
chr4 (473-510)||(48076921-48076958)
chr4 (479-524)||(55782641-55782686)
chr4 (479-524)||(55846821-55846866)
chr4 (375-411)||(637883-637919)
chr4 (479-523)||(14499247-14499291)
chr4 (476-524)||(21098133-21098181)
chr4 (478-514)||(26447431-26447467)
chr4 (475-518)||(2124545-2124588)
chr4 (475-518)||(12722938-12722981)
chr4 (475-518)||(16475020-16475063)
chr4 (475-518)||(17109720-17109763)
chr4 (475-518)||(25715727-25715770)
chr4 (475-518)||(43374448-43374491)
chr4 (476-515)||(51076901-51076940)
chr4 (475-518)||(54895405-54895448)
chr4 (345-411)||(14497006-14497071)
chr4 (479-517)||(29826626-29826664)
chr4 (476-518)||(36309618-36309660)
chr4 (345-411)||(50563729-50563794)
chr4 (477-518)||(562776-562817)
chr4 (447-476)||(9551625-9551654)
chr4 (475-516)||(10374046-10374087)
chr4 (477-518)||(31762930-31762971)
chr4 (477-518)||(33883295-33883336)
chr4 (477-518)||(38010712-38010753)
chr4 (477-518)||(43375523-43375564)
chr4 (473-510)||(50562679-50562716)
chr4 (477-518)||(55660444-55660485)
chr4 (475-518)||(12722738-12722782)
chr4 (375-411)||(38485674-38485710)
chr4 (478-510)||(48077864-48077896)
[»] chr3 (78 HSPs)
chr3 (345-525)||(26662424-26662604)
chr3 (345-524)||(9595867-9596046)
chr3 (345-525)||(9106267-9106447)
chr3 (345-525)||(30947797-30947977)
chr3 (345-525)||(2941812-2941992)
chr3 (345-524)||(3475294-3475473)
chr3 (345-524)||(19284671-19284850)
chr3 (344-525)||(46237644-46237825)
chr3 (345-525)||(6097570-6097750)
chr3 (346-524)||(33413899-33414078)
chr3 (345-524)||(54379163-54379341)
chr3 (349-524)||(26960630-26960805)
chr3 (345-526)||(47335032-47335218)
chr3 (344-525)||(10986351-10986532)
chr3 (446-517)||(50755163-50755234)
chr3 (446-524)||(19384376-19384454)
chr3 (446-524)||(51361518-51361596)
chr3 (348-406)||(51846785-51846843)
chr3 (171-315)||(15832312-15832461)
chr3 (342-406)||(41192355-41192419)
chr3 (471-525)||(8719133-8719187)
chr3 (471-525)||(9071020-9071074)
chr3 (348-406)||(34563352-34563410)
chr3 (344-413)||(51362436-51362504)
chr3 (345-414)||(51681999-51682068)
chr3 (345-413)||(19385313-19385380)
chr3 (476-524)||(34562394-34562442)
chr3 (345-413)||(47728388-47728456)
chr3 (349-413)||(53594972-53595036)
chr3 (453-495)||(31853164-31853206)
chr3 (344-404)||(23755284-23755344)
chr3 (345-411)||(7045300-7045365)
chr3 (475-524)||(16276664-16276713)
chr3 (344-408)||(23699326-23699390)
chr3 (344-408)||(23717781-23717845)
chr3 (344-408)||(23736237-23736301)
chr3 (476-524)||(41191404-41191452)
chr3 (347-411)||(50754008-50754071)
chr3 (475-518)||(8036801-8036844)
chr3 (344-411)||(8718100-8718166)
chr3 (344-411)||(9069987-9070053)
chr3 (478-517)||(16277433-16277472)
chr3 (478-517)||(19385334-19385373)
chr3 (347-402)||(32232993-32233048)
chr3 (475-518)||(36185905-36185948)
chr3 (475-518)||(50416481-50416524)
chr3 (475-518)||(50416564-50416607)
chr3 (478-517)||(51362457-51362496)
chr3 (372-411)||(52987650-52987689)
chr3 (345-411)||(28299952-28300018)
chr3 (484-521)||(17620734-17620771)
chr3 (476-517)||(47924367-47924408)
chr3 (477-517)||(8718108-8718148)
chr3 (477-517)||(9069995-9070035)
chr3 (477-517)||(27446215-27446255)
chr3 (349-413)||(37319458-37319522)
chr3 (446-489)||(7044387-7044430)
chr3 (475-518)||(8036989-8037032)
chr3 (475-518)||(12974013-12974056)
chr3 (475-518)||(12974191-12974233)
chr3 (349-408)||(16277417-16277475)
chr3 (475-518)||(19012562-19012605)
chr3 (475-518)||(36185727-36185770)
chr3 (475-518)||(38345281-38345324)
chr3 (475-518)||(49053426-49053469)
chr3 (478-517)||(50754013-50754052)
chr3 (345-411)||(8054713-8054778)
chr3 (345-391)||(9180111-9180157)
chr3 (369-411)||(39099220-39099262)
chr3 (475-517)||(47225848-47225890)
chr3 (475-516)||(21175268-21175309)
chr3 (473-510)||(23756295-23756332)
chr3 (479-524)||(40220788-40220833)
chr3 (447-476)||(47729134-47729163)
chr3 (478-511)||(52987669-52987702)
chr3 (448-476)||(23700056-23700084)
chr3 (448-476)||(23718511-23718539)
chr3 (448-476)||(23736967-23736995)
[»] chr1 (84 HSPs)
chr1 (344-524)||(20434609-20434789)
chr1 (345-524)||(24635926-24636105)
chr1 (345-521)||(49936827-49937003)
chr1 (345-525)||(48762217-48762397)
chr1 (345-524)||(25888916-25889094)
chr1 (345-524)||(43452542-43452721)
chr1 (345-525)||(19897646-19897826)
chr1 (345-525)||(16975954-16976135)
chr1 (345-524)||(6314115-6314295)
chr1 (345-524)||(18618835-18619013)
chr1 (345-495)||(50351803-50351953)
chr1 (342-448)||(28375461-28375567)
chr1 (447-524)||(23817412-23817489)
chr1 (344-424)||(34369659-34369739)
chr1 (345-424)||(4097895-4097974)
chr1 (446-524)||(11422541-11422619)
chr1 (345-422)||(11421594-11421671)
chr1 (447-524)||(23920966-23921043)
chr1 (446-518)||(23174403-23174475)
chr1 (348-424)||(23175509-23175585)
chr1 (446-525)||(21641588-21641667)
chr1 (446-524)||(4097105-4097182)
chr1 (447-524)||(180825-180902)
chr1 (348-406)||(21256777-21256835)
chr1 (349-413)||(31529663-31529727)
chr1 (345-411)||(37639341-37639407)
chr1 (349-413)||(33097409-33097473)
chr1 (473-524)||(21255835-21255886)
chr1 (345-411)||(18056784-18056849)
chr1 (348-406)||(31083365-31083423)
chr1 (345-411)||(35198181-35198247)
chr1 (446-495)||(34370488-34370537)
chr1 (349-410)||(51801734-51801795)
chr1 (477-525)||(31084404-31084452)
chr1 (349-413)||(44260522-44260586)
chr1 (349-413)||(44688608-44688672)
chr1 (473-524)||(18057807-18057858)
chr1 (343-406)||(20507286-20507349)
chr1 (352-391)||(37228364-37228403)
chr1 (475-525)||(17893066-17893116)
chr1 (446-495)||(8401426-8401475)
chr1 (475-518)||(9628599-9628642)
chr1 (475-518)||(14229361-14229404)
chr1 (478-517)||(18056791-18056830)
chr1 (475-518)||(18928955-18928998)
chr1 (345-408)||(22348039-22348101)
chr1 (475-518)||(33156993-33157036)
chr1 (475-518)||(33157180-33157223)
chr1 (352-391)||(41033946-41033985)
chr1 (475-518)||(42134133-42134176)
chr1 (343-413)||(28323330-28323400)
chr1 (476-526)||(32595284-32595334)
chr1 (477-518)||(1395353-1395394)
chr1 (477-518)||(10974634-10974675)
chr1 (477-518)||(14229173-14229214)
chr1 (477-518)||(17893275-17893316)
chr1 (345-406)||(41033262-41033322)
chr1 (475-516)||(45849111-45849152)
chr1 (347-395)||(13590469-13590517)
chr1 (372-408)||(16115877-16115913)
chr1 (479-518)||(9041055-9041094)
chr1 (475-518)||(12796424-12796467)
chr1 (475-514)||(18928783-18928822)
chr1 (478-517)||(22348046-22348085)
chr1 (476-523)||(23319011-23319058)
chr1 (475-518)||(31763973-31764016)
chr1 (475-518)||(32595105-32595148)
chr1 (477-524)||(45890595-45890642)
chr1 (476-518)||(32143770-32143812)
chr1 (476-518)||(42133945-42133987)
chr1 (477-518)||(12070612-12070653)
chr1 (345-402)||(13673891-13673948)
chr1 (446-475)||(16116998-16117027)
chr1 (477-518)||(17811285-17811326)
chr1 (479-520)||(19861717-19861758)
chr1 (345-402)||(20372205-20372262)
chr1 (447-476)||(23319078-23319107)
chr1 (344-413)||(23921896-23921964)
chr1 (477-518)||(29945418-29945459)
chr1 (477-518)||(31763776-31763817)
chr1 (475-516)||(45849309-45849350)
chr1 (475-511)||(14389852-14389888)
chr1 (478-510)||(16115865-16115897)
chr1 (476-516)||(46590760-46590800)
[»] chr5 (59 HSPs)
chr5 (345-524)||(26637724-26637903)
chr5 (349-524)||(14940243-14940418)
chr5 (344-524)||(14394467-14394647)
chr5 (345-524)||(37456680-37456859)
chr5 (344-524)||(3883922-3884102)
chr5 (340-524)||(15416659-15416843)
chr5 (345-524)||(13552983-13553162)
chr5 (425-524)||(30783538-30783636)
chr5 (344-426)||(30783434-30783516)
chr5 (446-524)||(28069242-28069320)
chr5 (344-413)||(16552637-16552706)
chr5 (344-413)||(33868154-33868223)
chr5 (347-411)||(16668794-16668858)
chr5 (347-411)||(13362772-13362835)
chr5 (473-525)||(23334705-23334756)
chr5 (347-411)||(25017217-25017280)
chr5 (473-523)||(13363792-13363842)
chr5 (345-411)||(28070153-28070218)
chr5 (345-411)||(34329127-34329192)
chr5 (446-500)||(34330157-34330211)
chr5 (350-410)||(4674965-4675025)
chr5 (347-411)||(18465556-18465620)
chr5 (477-525)||(23155519-23155567)
chr5 (482-526)||(23948588-23948632)
chr5 (475-518)||(11660982-11661025)
chr5 (478-517)||(13362777-13362816)
chr5 (475-518)||(22695540-22695583)
chr5 (478-517)||(25017236-25017275)
chr5 (478-517)||(28070172-28070211)
chr5 (478-517)||(34329134-34329173)
chr5 (475-518)||(39861780-39861823)
chr5 (345-411)||(23335707-23335772)
chr5 (479-525)||(25189816-25189862)
chr5 (477-518)||(3340591-3340632)
chr5 (477-518)||(15559050-15559091)
chr5 (473-510)||(16667667-16667704)
chr5 (475-518)||(20134200-20134243)
chr5 (475-518)||(20134399-20134442)
chr5 (475-518)||(20696327-20696370)
chr5 (475-518)||(22671997-22672040)
chr5 (478-517)||(23335726-23335765)
chr5 (477-520)||(25671290-25671333)
chr5 (475-518)||(35662068-35662111)
chr5 (475-518)||(35662233-35662276)
chr5 (475-518)||(39861580-39861623)
chr5 (372-411)||(42512225-42512264)
chr5 (446-476)||(16667721-16667751)
chr5 (475-517)||(22830788-22830830)
chr5 (475-517)||(23155843-23155885)
chr5 (446-475)||(2826098-2826127)
chr5 (475-516)||(5630271-5630312)
chr5 (477-518)||(7286754-7286795)
chr5 (477-518)||(11660794-11660835)
chr5 (477-518)||(16552248-16552289)
chr5 (477-518)||(39086518-39086559)
chr5 (475-520)||(39166150-39166195)
chr5 (477-518)||(39166342-39166383)
chr5 (477-517)||(703732-703772)
chr5 (475-518)||(15059633-15059677)
[»] scaffold0074 (2 HSPs)
scaffold0074 (345-524)||(24274-24453)
scaffold0074 (487-524)||(44777-44814)
[»] chr2 (62 HSPs)
chr2 (345-524)||(7487141-7487320)
chr2 (345-525)||(15016452-15016632)
chr2 (345-524)||(8149831-8150010)
chr2 (345-524)||(8154455-8154634)
chr2 (345-524)||(39355035-39355214)
chr2 (345-525)||(1292065-1292245)
chr2 (347-522)||(34464713-34464888)
chr2 (345-486)||(9143585-9143726)
chr2 (446-525)||(18297162-18297241)
chr2 (446-518)||(25193962-25194034)
chr2 (345-424)||(2263573-2263652)
chr2 (344-406)||(18762866-18762928)
chr2 (436-495)||(18762928-18762987)
chr2 (477-524)||(41345082-41345129)
chr2 (347-413)||(5098718-5098784)
chr2 (345-411)||(18298111-18298176)
chr2 (348-406)||(41346045-41346103)
chr2 (344-413)||(25995285-25995354)
chr2 (475-518)||(20661595-20661638)
chr2 (352-391)||(21155441-21155480)
chr2 (352-391)||(27974291-27974330)
chr2 (352-391)||(28060820-28060859)
chr2 (341-411)||(4281788-4281858)
chr2 (345-411)||(20709774-20709839)
chr2 (345-411)||(25192892-25192957)
chr2 (446-494)||(2264625-2264673)
chr2 (345-413)||(36636935-36637003)
chr2 (361-413)||(39548058-39548110)
chr2 (453-488)||(4578590-4578625)
chr2 (475-518)||(16111705-16111748)
chr2 (478-517)||(18298130-18298169)
chr2 (478-517)||(25192899-25192938)
chr2 (475-518)||(31783794-31783837)
chr2 (475-518)||(34726605-34726648)
chr2 (350-405)||(40853685-40853740)
chr2 (359-413)||(16142073-16142127)
chr2 (476-518)||(20661397-20661439)
chr2 (477-518)||(12449245-12449286)
chr2 (346-411)||(14551319-14551382)
chr2 (477-518)||(24183599-24183640)
chr2 (473-510)||(43823873-43823910)
chr2 (343-391)||(3925576-3925624)
chr2 (349-413)||(13081858-13081922)
chr2 (477-517)||(19246664-19246704)
chr2 (451-486)||(14550465-14550500)
chr2 (478-517)||(20709781-20709820)
chr2 (475-518)||(22596305-22596348)
chr2 (475-518)||(22596504-22596547)
chr2 (475-518)||(31711511-31711554)
chr2 (475-518)||(34726796-34726839)
chr2 (475-518)||(42364693-42364736)
chr2 (475-518)||(44915491-44915534)
chr2 (345-411)||(44352679-44352744)
chr2 (477-518)||(12449055-12449096)
chr2 (477-518)||(25575324-25575365)
chr2 (477-518)||(37867155-37867196)
chr2 (477-518)||(37867357-37867398)
chr2 (477-518)||(42364493-42364534)
chr2 (477-518)||(44915292-44915333)
chr2 (475-511)||(15252847-15252883)
chr2 (350-402)||(24024633-24024685)
chr2 (476-520)||(36635754-36635798)
[»] chr8 (74 HSPs)
chr8 (345-524)||(41099182-41099364)
chr8 (345-524)||(19784271-19784450)
chr8 (345-525)||(10237354-10237534)
chr8 (344-524)||(34633208-34633388)
chr8 (345-524)||(41451105-41451284)
chr8 (345-524)||(1149910-1150089)
chr8 (345-525)||(15227030-15227210)
chr8 (345-524)||(30413914-30414093)
chr8 (345-489)||(43690640-43690784)
chr8 (345-486)||(7857680-7857821)
chr8 (446-525)||(4835512-4835591)
chr8 (447-516)||(1209758-1209827)
chr8 (446-518)||(39657709-39657781)
chr8 (447-524)||(2751207-2751284)
chr8 (446-508)||(4840974-4841036)
chr8 (454-518)||(7059144-7059208)
chr8 (348-406)||(9852273-9852331)
chr8 (348-406)||(34648133-34648191)
chr8 (345-408)||(15260854-15260917)
chr8 (352-406)||(23396484-23396538)
chr8 (476-524)||(35301624-35301672)
chr8 (345-411)||(32987445-32987510)
chr8 (348-406)||(35302591-35302649)
chr8 (348-394)||(40023279-40023325)
chr8 (471-524)||(15259850-15259903)
chr8 (344-413)||(42433700-42433768)
chr8 (349-413)||(13526669-13526733)
chr8 (349-413)||(13616204-13616268)
chr8 (473-525)||(23397441-23397493)
chr8 (343-411)||(39021973-39022040)
chr8 (349-408)||(40247288-40247347)
chr8 (345-402)||(2522867-2522924)
chr8 (476-521)||(34647169-34647214)
chr8 (343-407)||(7058112-7058175)
chr8 (371-411)||(8550529-8550569)
chr8 (473-525)||(9853254-9853306)
chr8 (478-517)||(1208716-1208755)
chr8 (475-518)||(17792892-17792935)
chr8 (478-517)||(32987464-32987503)
chr8 (475-518)||(35448610-35448653)
chr8 (478-517)||(39021982-39022021)
chr8 (344-407)||(40012186-40012248)
chr8 (345-411)||(1208709-1208774)
chr8 (475-517)||(1672931-1672973)
chr8 (349-395)||(10443586-10443632)
chr8 (345-411)||(12355422-12355488)
chr8 (479-525)||(17232881-17232926)
chr8 (475-517)||(27506708-27506750)
chr8 (479-517)||(42433708-42433746)
chr8 (374-411)||(4836701-4836738)
chr8 (374-411)||(4842146-4842183)
chr8 (349-413)||(28698578-28698643)
chr8 (477-518)||(34343453-34343494)
chr8 (479-524)||(42434566-42434611)
chr8 (477-521)||(40022386-40022430)
chr8 (477-520)||(185880-185923)
chr8 (478-517)||(7058121-7058160)
chr8 (372-411)||(7614094-7614133)
chr8 (475-518)||(15808886-15808929)
chr8 (475-518)||(17656619-17656662)
chr8 (475-518)||(23567487-23567530)
chr8 (475-518)||(23567643-23567686)
chr8 (473-507)||(1672769-1672803)
chr8 (345-411)||(15181790-15181856)
chr8 (345-391)||(18022053-18022099)
chr8 (476-518)||(18757329-18757371)
chr8 (359-405)||(30651963-30652009)
chr8 (479-521)||(40004716-40004758)
chr8 (477-518)||(10586063-10586104)
chr8 (477-518)||(15809842-15809883)
chr8 (475-516)||(21120195-21120236)
chr8 (477-518)||(24473246-24473287)
chr8 (477-518)||(34343250-34343291)
chr8 (476-524)||(39023000-39023048)
[»] scaffold0581 (1 HSPs)
scaffold0581 (345-495)||(8337-8487)
[»] scaffold0571 (2 HSPs)
scaffold0571 (425-525)||(539-639)
scaffold0571 (345-426)||(661-742)
[»] scaffold0338 (1 HSPs)
scaffold0338 (446-517)||(6484-6555)
[»] scaffold0238 (2 HSPs)
scaffold0238 (345-413)||(25230-25297)
scaffold0238 (478-517)||(25251-25290)
[»] scaffold0009 (2 HSPs)
scaffold0009 (473-518)||(202913-202958)
scaffold0009 (475-525)||(51899-51949)
[»] scaffold0097 (2 HSPs)
scaffold0097 (345-411)||(13613-13678)
scaffold0097 (478-517)||(13620-13659)
[»] scaffold0544 (2 HSPs)
scaffold0544 (346-411)||(10675-10739)
scaffold0544 (478-517)||(10694-10733)
[»] scaffold0194 (2 HSPs)
scaffold0194 (473-525)||(28673-28725)
scaffold0194 (448-476)||(28628-28656)
[»] scaffold0516 (1 HSPs)
scaffold0516 (475-518)||(1248-1291)
[»] scaffold0249 (2 HSPs)
scaffold0249 (475-518)||(23545-23588)
scaffold0249 (476-516)||(23736-23776)
[»] scaffold0050 (2 HSPs)
scaffold0050 (479-522)||(20974-21017)
scaffold0050 (345-411)||(18980-19045)
[»] scaffold0189 (2 HSPs)
scaffold0189 (343-413)||(11188-11257)
scaffold0189 (479-517)||(11210-11248)
[»] scaffold0102 (1 HSPs)
scaffold0102 (476-518)||(33617-33659)
[»] scaffold0558 (2 HSPs)
scaffold0558 (346-407)||(2448-2508)
scaffold0558 (346-407)||(5860-5920)
[»] scaffold0460 (1 HSPs)
scaffold0460 (345-402)||(1604-1661)
[»] scaffold0221 (1 HSPs)
scaffold0221 (479-524)||(20479-20524)
[»] scaffold0129 (1 HSPs)
scaffold0129 (477-518)||(20122-20163)
[»] scaffold0006 (2 HSPs)
scaffold0006 (345-402)||(209326-209383)
scaffold0006 (345-402)||(171505-171562)
[»] scaffold0337 (1 HSPs)
scaffold0337 (348-411)||(7020-7082)
[»] scaffold0117 (1 HSPs)
scaffold0117 (475-518)||(17858-17900)
[»] scaffold0023 (2 HSPs)
scaffold0023 (344-411)||(130466-130532)
scaffold0023 (344-411)||(134560-134626)
[»] scaffold0664 (1 HSPs)
scaffold0664 (475-517)||(3154-3196)
[»] scaffold0455 (1 HSPs)
scaffold0455 (479-525)||(10689-10735)
[»] scaffold0154 (1 HSPs)
scaffold0154 (479-525)||(37483-37529)
[»] scaffold0002 (1 HSPs)
scaffold0002 (345-395)||(450202-450252)
[»] scaffold0069 (1 HSPs)
scaffold0069 (345-402)||(51359-51416)
[»] scaffold0019 (1 HSPs)
scaffold0019 (345-406)||(164058-164118)
[»] scaffold0004 (1 HSPs)
scaffold0004 (476-517)||(96001-96042)


Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 344
Target Start/End: Original strand, 22268312 - 22268635
Alignment:
Q  18 aatttgattttgttgatgatgttacatacatcataaatatgctaaaaatagttctactgatttttaacttgtacataacctataaagattcttcacttac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  22268312 aatttgattttgttgatgatgttacatacatcataaatatgctaaaaatagttc-actgatttttaactagtacataacctataaagattcttcacttac 22268410  T
Q  118 tatataggttatcaaaatttatagtagtgctaatctttcatgagtcacctattagcatatgaataaaaggaggaagaaataataagcaaaacctagcttg 217  Q
    ||    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268411 ta----ggttatcaaaatttatagtagtgctaatctttcatgagtcacacattagcatatgaataaaaggaggaagaaataataagcaaaacctagcttg 22268506  T
Q  218 gcgtgcaagttacccaactaacaacatttgaatttacttgtaatttcatttacatttcac--acatttagttagttaaggtagttgctatgagctggcat 315  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||| ||||| ||||||||||||||    
T  22268507 gcgtgcaagttacccaactaacaacatttgaatttacatgtaatttcatttacatttcactttcatttagttagttaagatagttactatgagctggcat 22268606  T
Q  316 ttccagattgtatataagcacttatcatg 344  Q
    ||| ||| |||||||||||||||||||||    
T  22268607 ttctagactgtatataagcacttatcatg 22268635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 344 - 522
Target Start/End: Complemental strand, 16933311 - 16933132
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16933311 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 16933212  T
Q  444 cactttg-ggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16933211 cactttggggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactc 16933132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 344 - 522
Target Start/End: Complemental strand, 16938694 - 16938515
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16938694 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 16938595  T
Q  444 cactttg-ggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16938594 cactttggggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactc 16938515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 30884288 - 30884109
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30884288 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 30884189  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30884188 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30884109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 46358520 - 46358699
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  46358520 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 46358619  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46358620 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 46358699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 763696 - 763877
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  763696 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagatttcttttattttgaacataaatggttttggct 763795  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  763796 cgctttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactcccg 763877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 344 - 524
Target Start/End: Original strand, 31660068 - 31660248
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |    
T  31660068 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggtt 31660167  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31660168 cactttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactccc 31660248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 47340146 - 47340326
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaa-cacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47340146 ggcaaaagttatggtgcataagttattttcttatgcaccgtgcataaaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 47340245  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47340246 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 47340326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 525
Target Start/End: Original strand, 35736963 - 35737128
Alignment:
Q  360 gcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctcactttgggggtgtag 459  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  35736963 gcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctcactttggggatgtag 35737062  T
Q  460 gaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35737063 gaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 35737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 41911175 - 41910999
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||| ||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttt---attttgaacaaaaatggttttggttc 41911079  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41911078 actttgagggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 41910999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 20000740 - 20000651
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatg 434  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20000740 ggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagatttctttcactttgaacaaaaatg 20000651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 46572647 - 46572568
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  46572647 ctttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctcccg 46572568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 518
Target Start/End: Original strand, 48692021 - 48692093
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48692021 ctttggaggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 48692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 32685917 - 32685839
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  32685917 ctttgagggtgtaggaagcaattatgttgagatttatgcacggtgtataaggatttccttatgcaccataaccgctccc 32685839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 15973933 - 15973856
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  15973933 ctttaggggtgtaggaagcaactatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctcc 15973856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 5757386 - 5757452
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  5757386 ggcaaaagttattatgcataagacatttccttatgcaccgtgcataaacacttcacaaccatcagat 5757452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 11732710 - 11732645
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccattagattt 11732645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 34875493 - 34875557
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  34875493 aaagttattatgcataagccatttccttatgcaccctgcataaacacttcacaaccatcagattt 34875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 24359874 - 24359932
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttcacaaccat 24359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 470 - 524
Target Start/End: Complemental strand, 34228654 - 34228600
Alignment:
Q  470 tgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34228654 tgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactccc 34228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 44141317 - 44141249
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  44141317 ggcaaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 44141249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 48830601 - 48830648
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48830601 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 48830648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 476 - 525
Target Start/End: Complemental strand, 11732085 - 11732036
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  11732085 gatttatgcacggtgcataaggatttccttatgcaccataaccgctcccg 11732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 15975001 - 15974934
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||| ||||    
T  15975001 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcatattt 15974934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 524
Target Start/End: Original strand, 24360756 - 24360804
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24360756 gatttatgcacggtgcataaatatttccttatgcaccataaccactccc 24360804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 39007715 - 39007647
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||| |||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39007715 ggcaaaggttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcatattt 39007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 475 - 523
Target Start/End: Original strand, 46025060 - 46025108
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  46025060 ggatttatgcacggtgcatagggatttccttatgcaccataaccactcc 46025108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 12286723 - 12286769
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  12286723 ttatgcactgtgcataaagatttccttatgcaccataaccactcccg 12286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 30428873 - 30428938
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||  |||||||||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacatttcacaaccatcagat 30428938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 525
Target Start/End: Original strand, 33798733 - 33798783
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  33798733 ggatttacgtacggtgcataaggatttccttatgcaccataaccactcccg 33798783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 46024027 - 46024092
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||| |||  | | ||||||||||||||||||||||| |||||||||||||||    
T  46024027 ggcaaaagttatggtgcacaagaaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 46024092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 25778836 - 25778904
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||||||||||||  | ||| |||||||| |||||||| ||| |||||||||||||||||    
T  25778836 gggcaaaagttatggtgcataagaaaattc-ttatgcactgtgcataagcacttcacaaccatcagattt 25778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 531
Target Start/End: Complemental strand, 44426642 - 44426586
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcccgcggtta 531  Q
    ||||||||||| ||||||||| |||||||||||||||||||||| | |||| |||||    
T  44426642 ggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccgtggtta 44426586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 12279791 - 12279752
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12279791 tttatgcacggtgcataaagatttccttatgcaccataac 12279752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 15974955 - 15974994
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  15974955 tttatgcacggtgcataaggatttccttatgcaccataac 15974994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 26945714 - 26945757
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  26945714 ggatttatgcagggtgcataaggatttccttatgcaccataacc 26945757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 30428919 - 30428880
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30428919 tttatgcacggtgcataaggatttccttatgcaccataac 30428880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 38837729 - 38837772
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  38837729 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 38837772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 44426799 - 44426842
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  44426799 ggatttatgcagggtgcataaagatttccttatgcaccataacc 44426842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 453 - 518
Target Start/End: Original strand, 48306331 - 48306392
Alignment:
Q  453 ggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |   |||||||||||||||||    
T  48306331 ggtgtaggaag-aattatgttgggatttatgcacggtgcataagaa---ccttatgcaccataacc 48306392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 6797451 - 6797394
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||||||||  |||||||| |||||||||||||| | ||||||||||| ||||||    
T  6797451 ggcaaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaa 6797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 46004537 - 46004578
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  46004537 atttatgcagggtgcataaggatttccttatgcaccataacc 46004578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 48690893 - 48690957
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||||||||||||   | | ||||||||||||||||||||||  ||||||||||||    
T  48690893 tgggcaaaagttatggtgcataaagaaat-ccttatgcaccgtgcataaacagttcacaaccatca 48690957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 12279687 - 12279648
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  12279687 tttatacacggtgcataatgatttccttatgtaccataac 12279648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 31365315 - 31365272
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  31365315 ggatttatgcaagatgcataaggatttccttatgcaccataacc 31365272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 34227720 - 34227677
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  34227720 ggatttatgcaggttgcataaggatttccttatgcaccataacc 34227677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 43742293 - 43742250
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  43742293 ggatttatgcaggatgcataaggatttccttatgcaccataacc 43742250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 48305237 - 48305285
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacac 395  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||    
T  48305237 ggcaaaagttatggtgcataagga--ttccttatgcaccgtgcataaacac 48305285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 48690941 - 48690902
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  48690941 tttatgcacggtgcataaggatttctttatgcaccataac 48690902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 10555949 - 10556014
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  |||| |||||||||| | |||||  | ||||||||||||||||    
T  10555949 ggcaaaagttatggtgcataag-gatttgcttatgcaccatacataaggaaatcacaaccatcagat 10556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 27335694 - 27335629
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  |  ||||| ||||| |||||||||| ||||||||||| |||||||||||||||    
T  27335694 ggcaaaagttattataaataagtcattttcttatgcacc-tgcataaacacttcacaaccatcagat 27335629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 924539 - 924498
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  924539 atttatgcaaggtgtataaagatttccttatgcaccataacc 924498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 7845099 - 7845140
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  7845099 atttatgcaggttgcataaggatttccttatgcaccataacc 7845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 34227878 - 34227919
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  34227878 atttatgcagggtgcataagaatttccttatgcaccataacc 34227919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 41065971 - 41066012
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||    
T  41065971 atttatgcagggtacataaggatttccttatgcaccataacc 41066012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 46346780 - 46346719
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    ||||||||||  |||||||| ||||| |||||||| | || |||||||| ||||||||||||    
T  46346780 caaaagttattatgcataagtcattttcttatgcatcctgtataaacacttcacaaccatca 46346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 510
Target Start/End: Complemental strand, 28396768 - 28396736
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgca 510  Q
    |||||||||||||||||| ||||||||||||||    
T  28396768 tttatgcacggtgcataaggatttccttatgca 28396736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 45402938 - 45402886
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacac 395  Q
    ||||||||||||||  ||||||||  |||||||||||||||  ||||||||||    
T  45402938 tgggcaaaagttattatgcataagttatttccttatgcacccagcataaacac 45402886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 46025013 - 46025041
Alignment:
Q  448 ttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||    
T  46025013 ttgggggtgtaggaagcaattatgttggg 46025041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 46573563 - 46573500
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||| ||||||||    || ||||||||||||  |||||||| |||||||||||||||    
T  46573563 ggcaaaagttatgatgcataagg---tttcttatgcaccgtatataaacacttcacaaccatcagat 46573500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 33684 - 33864
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 33783  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  33784 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataaccaatcccg 33864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 9e-90; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 1449542 - 1449721
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 1449641  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  1449642 actttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactccc 1449721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 349 - 524
Target Start/End: Original strand, 6900807 - 6900982
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctcactt 448  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6900807 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 6900906  T
Q  449 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6900907 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 6900982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 15493174 - 15493353
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  15493174 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcataaccattagatttcttttattttgaacaaaaatggttttggctc 15493273  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15493274 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 15493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 7089082 - 7089262
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  7089082 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 7089181  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  7089182 actttgggggtgtaggaagcaattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccactcccg 7089262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 31216662 - 31216842
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 31216761  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||| |||||  |||||||||||||||||||||| |||||    
T  31216762 actttaggggtgtaggaagcaattatgttggaatttatacacggtccataagaatttccttatgcaccataaccattcccg 31216842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 345 - 493
Target Start/End: Complemental strand, 1536962 - 1536814
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 1536863  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcat 493  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1536862 gctttgggggtgtaggaagcaattatattgggatttatgcacggtgcat 1536814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 524
Target Start/End: Complemental strand, 34870049 - 34869950
Alignment:
Q  425 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34870049 aacaaaaatggttttggttcactttggaggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 344
Target Start/End: Original strand, 26621413 - 26621591
Alignment:
Q  167 tattagcatatgaataaaaggaggaagaaataataagcaaaacctagcttggcgtgcaagttacccaactaacaacatttgaatttacttgtaatttcat 266  Q
    ||||||||||  || |||| ||| ||||||||| ||   || |||||||||||| |||||||||| | ||||| | ||||||||||||||||||||||||    
T  26621413 tattagcataccaagaaaaagagaaagaaataacaaaagaatcctagcttggcgcgcaagttaccta-ctaactaaatttgaatttacttgtaatttcat 26621511  T
Q  267 ttacatttcaca--catttagttagttaaggtagttgctatgagctggcatttccagattgtatataagcacttatcatg 344  Q
    || ||||||||   ||||||||||||||||||||||  | ||| ||| |||| ||||| |||||||||||||||||||||    
T  26621512 ttgcatttcactttcatttagttagttaaggtagttattgtgaactgacattaccagactgtatataagcacttatcatg 26621591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 344
Target Start/End: Original strand, 26727392 - 26727570
Alignment:
Q  167 tattagcatatgaataaaaggaggaagaaataataagcaaaacctagcttggcgtgcaagttacccaactaacaacatttgaatttacttgtaatttcat 266  Q
    ||||||||||  || |||| ||| ||||||||| ||   || |||||||||||| |||||||||| | ||||| | ||||||||||||||||||||||||    
T  26727392 tattagcataccaagaaaaagagaaagaaataacaaaagaatcctagcttggcgcgcaagttaccta-ctaactaaatttgaatttacttgtaatttcat 26727490  T
Q  267 ttacatttcaca--catttagttagttaaggtagttgctatgagctggcatttccagattgtatataagcacttatcatg 344  Q
    || ||||||||   ||||||||||||||||||||||  | ||| ||| |||| ||||| |||||||||||||||||||||    
T  26727491 ttgcatttcactttcatttagttagttaaggtagttattgtgaactgacattaccagactgtatataagcacttatcatg 26727570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 34870151 - 34870071
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaa 426  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagatttctttcattttgaa 34870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 450 - 525
Target Start/End: Original strand, 878365 - 878440
Alignment:
Q  450 gggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  878365 gggggtgtaggaagtaattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccgctcccg 878440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 30908655 - 30908713
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 7765406 - 7765453
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7765406 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 7765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 344 - 411
Target Start/End: Original strand, 35119238 - 35119300
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||    
T  35119238 gggcaaaagttatggtgcataag-----tccttatgcaccgtgcataaacacttcacaaccatcagat 35119300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 522
Target Start/End: Original strand, 30909437 - 30909486
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  30909437 tgggatttatgcacggtgcataaggaattccttatgcaccataaccactc 30909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 35121490 - 35121538
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35121490 ctttgggggtgtag-aagcaattatgttgggatttatgcacggtgcataa 35121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 33346437 - 33346374
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  33346437 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 33346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 7764444 - 7764499
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaac 403  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||    
T  7764444 aaaagttatggtgcataagccattttcttatgcgccgtgtataaacacttcacaac 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 15034992 - 15035033
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15034992 gatttatgcacggtgcataaggatttccttatgcaccataac 15035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 524
Target Start/End: Complemental strand, 18755703 - 18755658
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  18755703 ttatgcaccgtgcataaggatttccttatgcaccataaccactccc 18755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 495
Target Start/End: Complemental strand, 33345408 - 33345360
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  33345408 ctttggaggtgtag-aagcaattatgttgggatttatgcacggtgcataa 33345360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 18611190 - 18611254
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||  |||||||| |||||| ||||||||  ||||||||||| |||||||||||||||    
T  18611190 caaaagttattatgcataagacatttctttatgcactctgcataaacacttcacaaccatcagat 18611254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 520
Target Start/End: Complemental strand, 4102011 - 4101964
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  4102011 tgggatttatgcacggtgcataaacatttccttatgcactataaccac 4101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 12394399 - 12394438
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12394399 tttatgcacggtgcataaggatttccttatgcaccataac 12394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 33346390 - 33346429
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  33346390 tttatgcacggtgcataaggatttccttatgcaccataac 33346429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 4338672 - 4338618
Alignment:
Q  359 tgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||| |||||||||| ||||||||||| ||| || ||||||||||    
T  4338672 tgcataagccattttcttatgcaccctgcataaacacttcaaaatcatcagattt 4338618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 16968075 - 16968021
Alignment:
Q  359 tgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||| |||||||||| ||||||||||| ||| |||||||| ||||    
T  16968075 tgcataagccattttcttatgcaccctgcataaacacttcataaccatcaaattt 16968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 19284414 - 19284372
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  19284414 gatttatgcagggtgcataaggatttccttatgcaccataacc 19284372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 21384990 - 21385032
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  21384990 gatttatgcagggtgcataaggatttccttatgcaccataacc 21385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 24736608 - 24736574
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggattt 480  Q
    |||||||||||||||||||||||||||||||||||    
T  24736608 ctttgggggtgtaggaagcaattatgttgggattt 24736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 24736644 - 24736610
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggattt 480  Q
    |||||||||||||||||||||||||||||||||||    
T  24736644 ctttgggggtgtaggaagcaattatgttgggattt 24736610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 10588955 - 10588996
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  10588955 atttatgcagggtgcataaggatttccttatgcaccataacc 10588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 22857530 - 22857489
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  22857530 atttatgcagggtgcataaggatttccttatgcaccataacc 22857489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaacc 404  Q
    |||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||    
T  12394442 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 27079991 - 27079939
Alignment:
Q  350 aagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    |||||||  |||||||| ||||| |||||||||||||||||||||| ||||||    
T  27079991 aagttattatgcataagtcattttcttatgcaccgtgcataaacacttcacaa 27079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 14237822 - 14237779
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||    
T  14237822 ggatttatgtagggtgcataaggatttccttatgcaccataacc 14237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 510
Target Start/End: Original strand, 18612358 - 18612397
Alignment:
Q  471 gttgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  18612358 gttgggatttatgtacggtgcataaggatttccttatgca 18612397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Complemental strand, 20522711 - 20522668
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||||| |||||||||  |||||||||||||||||||||||    
T  20522711 atttatgcagggtgcataaatatttccttatgcaccataaccac 20522668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Original strand, 20522850 - 20522893
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  20522850 atttatgtagggtgcataaggatttccttatgcaccataaccac 20522893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 22857677 - 22857720
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  22857677 ggatttatgcagggtgcataaggattttcttatgcaccataacc 22857720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 411
Target Start/End: Complemental strand, 24737726 - 24737691
Alignment:
Q  376 tatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||| |||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagat 24737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 25119470 - 25119513
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  25119470 ggatttatgcaggctgcataaggatttccttatgcaccataacc 25119513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 29157252 - 29157291
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  29157252 tccttatgcaccgtgcataaacactttacaaccatcagat 29157291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 10698620 - 10698578
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| |||||| || ||||||||||||||||||||||    
T  10698620 gatttatgcagggtgcacaaggatttccttatgcaccataacc 10698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 15035040 - 15034975
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  |  |||||||||||||||||||||    |||||||||||||||    
T  15035040 ggcaaaagttatggtgcataag-gaaatccttatgcaccgtgcataaatcattcacaaccatcagat 15034975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 22042365 - 22042300
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |  |||||||||| |||||||    ||||||||||||||||    
T  22042365 ggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 22042300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 28116828 - 28116893
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |  |||||||||| |||||||   | |||||||||||||||    
T  28116828 ggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagatcttcacaaccatcagat 28116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 28132783 - 28132829
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  28132783 ttatgcacggtgcataaggaaatccttatgcaccataaccacacccg 28132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 34399641 - 34399706
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | |||||||||||||  |||||||| |||||| ||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtatataaacacttcacaatcatcagat 34399706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 19281325 - 19281284
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  19281325 atttatgcagggtgcacaaggatttccttatgcaccataacc 19281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 25119148 - 25119107
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  25119148 atttatgcagggtgcataagaatttccttatgcaccataacc 25119107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 32556344 - 32556393
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaaca 394  Q
    ||||||||||||  |||||||| ||||| |||||||||| ||||||||||    
T  32556344 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaaca 32556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 517
Target Start/End: Complemental strand, 34399680 - 34399648
Alignment:
Q  485 acggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| |||||||||||||||||||||    
T  34399680 acggtgcataaggatttccttatgcaccataac 34399648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 6e-88; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 11785974 - 11786154
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11785974 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11786073  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11786074 acttttggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 11786154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 11798141 - 11798321
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11798141 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11798240  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11798241 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 11798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 49426123 - 49425943
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  49426123 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 49426024  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49426023 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 49425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 521
Target Start/End: Complemental strand, 13635791 - 13635615
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  13635791 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgactc 13635692  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccact 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13635691 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccact 13635615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 15051202 - 15051023
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  15051202 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 15051103  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15051102 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 15051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 345 - 520
Target Start/End: Original strand, 30597699 - 30597874
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 30597798  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30597799 actctgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccac 30597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 345 - 510
Target Start/End: Complemental strand, 51921331 - 51921166
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 51921232  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51921231 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgca 51921166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 344 - 524
Target Start/End: Complemental strand, 49492579 - 49492399
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  49492579 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgact 49492480  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  49492479 cactttaggagtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataactactccc 49492399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 344 - 524
Target Start/End: Original strand, 53441319 - 53441499
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  53441319 gggcaaaagttatggtgcataagttatttccttatgcatcgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggct 53441418  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  53441419 cactttgggggtgtaggaagcaattatgttggaatttatgcccggtgcataaggatttccttatgcaccataaccactccc 53441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 27865803 - 27865624
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  27865803 ggcaaaagttatagtgcataagccatttccatatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaataattttggctc 27865704  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  27865703 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatacaccataaccactccc 27865624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 46672439 - 46672618
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  46672439 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttattttattttgaacaaaaatagttttggctc 46672538  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||    
T  46672539 acttt-ggggtgtaggaagcaatcatgttgggatttatgcacgatgcataagaatttccttatgcaacataaccactcccg 46672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 345 - 508
Target Start/End: Complemental strand, 35291614 - 35291451
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||    
T  35291614 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccataagatttattttattttgaacaaaaatagttttggctc 35291515  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatg 508  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35291514 aatttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatg 35291451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 345 - 489
Target Start/End: Original strand, 1621875 - 1622020
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||     
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttgacta 1621974  T
Q  445 acttt-gggggtgtaggaagcaattatgttgggatttatgcacggt 489  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1621975 actttggggggtgtaggaagcaattatgttgggatttatgcacggt 1622020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 343 - 495
Target Start/End: Original strand, 36011841 - 36011993
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggc 442  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36011841 tgggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggc 36011940  T
Q  443 tcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  36011941 tcactttaggggtgtaggaagcaattatgttgagatttatacacggtgcataa 36011993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 345 - 495
Target Start/End: Original strand, 55765481 - 55765631
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||    
T  55765481 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatgattttgactc 55765580  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||  |||| || ||||||||||| ||||||||||||||||||||||||    
T  55765581 actttaagggtatatgaagcaattatattgggatttatgcacggtgcataa 55765631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 9278176 - 9277999
Alignment:
Q  167 tattagcatatgaataaaaggaggaagaaataataagcaaaacctagcttggcgtgcaagttacccaactaacaacatttgaatttacttgtaatttcat 266  Q
    |||||||||||||| |||| ||||| ||||||| ||| |||||||||||||||| |||||||||    ||||| | |||||| |||||||||||||||||    
T  9278176 tattagcatatgaagaaaaagaggatgaaataacaagaaaaacctagcttggcgcgcaagttacttt-ctaactaaatttgagtttacttgtaatttcat 9278078  T
Q  267 ttacatttcaca--catttagttagttaaggtagttgctat--gagctggcatttccagattgtatataagcacttatc 341  Q
    || ||||||||   ||||||||||||| |||||||| ||||  |||||| |||||||||||||||||||||||||||||    
T  9278077 ttgcatttcactttcatttagttagttgaggtagttactatatgagctgacatttccagattgtatataagcacttatc 9277999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 45256866 - 45256946
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccgc 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  45256866 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccgc 45256946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 447 - 522
Target Start/End: Original strand, 50644642 - 50644717
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50644642 tttgggggtataggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactc 50644717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 516
Target Start/End: Original strand, 638965 - 639035
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  638965 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 446 - 524
Target Start/End: Original strand, 10473619 - 10473697
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  10473619 ctttgggggtgtaggaagcaattaggttggaatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 10473697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 26577334 - 26577257
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  26577334 ctttgggggtgtaggaagcaattatgttgaaatttatgcacggtgcataaggatttccttatgcaccataaccgctcc 26577257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 10472497 - 10472569
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttt 417  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  10472497 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagatttcttt 10472569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 26578255 - 26578176
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  26578255 ggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagatttctttcattttg 26578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 347 - 424
Target Start/End: Original strand, 38244946 - 38245023
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  38244946 caaaagttatggtgcataagccatttccttctgcacagttcataaacacttcacaaccatcagatttcttttattttg 38245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 518
Target Start/End: Complemental strand, 51836400 - 51836328
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  51836400 ctttaggggtgtaggaagcaattatgttgggatttatgcacgatgcataaaaatttccttatgcaccataacc 51836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 25574194 - 25574126
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  25574194 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 25574126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 30358835 - 30358887
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30358835 tgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 30358887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 1729678 - 1729615
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagat 1729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 402
Target Start/End: Original strand, 20861583 - 20861637
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20861583 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaa 20861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 30357810 - 30357868
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 38010145 - 38010202
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttcacaaccat 38010202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 22180252 - 22180201
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  22180252 tgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 22180201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 16298925 - 16298989
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||    
T  16298925 aaagttattatgcataagtcatttccttatgcaccctgcataatcacttcacaaccatcagattt 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 24686574 - 24686634
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatc 407  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 24686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 45255973 - 45256040
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||| |||||||    
T  45255973 tgggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 45256040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 50643743 - 50643810
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||| |||||||||||||    
T  50643743 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 805109 - 805148
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  805109 gttatggtgcataagccatttccttatgcaccgtgcataa 805148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 525
Target Start/End: Complemental strand, 25715687 - 25715637
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  25715687 ggatttatgcagggtgcataaggatttccttatgcaccataaccacgcccg 25715637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 26447477 - 26447412
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||| ||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 26447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 27764240 - 27764305
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| || ||||||||||||    
T  27764240 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcgcaaccatcagat 27764305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 33883483 - 33883525
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  33883483 ggatttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 411
Target Start/End: Complemental strand, 36621762 - 36621701
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  36621762 aaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 36621701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 22181307 - 22181243
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||||||||  | | |||||||||||||||||||| || |||||||||||||||||    
T  22181307 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaaaacttcacaaccatcagattt 22181243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 54895583 - 54895628
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  54895583 ggatttatgcagggtgcataaggatttccttatgcaccataaccac 54895628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 38245889 - 38245929
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcac 486  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  38245889 ctttgggggtgtaggaaacaattatgttgggatttatgcac 38245929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 4168384 - 4168423
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagat 4168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 8165806 - 8165763
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  8165806 ggatttatgcagggtgcataaggatttccttatgcaccataacc 8165763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 17109918 - 17109961
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  17109918 ggatttatgcagggtgcataaggatttccttatgcaccataacc 17109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 21995714 - 21995671
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  21995714 ggatttatgcagggtgcataaggatttccttatgcaccataacc 21995671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 22181264 - 22181303
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  22181264 tttatgcacggtgcataaggatttccttatgcaccataac 22181303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 27764286 - 27764247
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27764286 tttatgcacggtgcataaggatttccttatgcaccataac 27764247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 30779387 - 30779344
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  30779387 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 30779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 36621720 - 36621759
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36621720 tttatgcacggtgcataaggatttccttatgcaccataac 36621759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 36924285 - 36924242
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  36924285 ggatttatgcagggtgcataaggatttccttatgcaccataacc 36924242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 37059755 - 37059712
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  37059755 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 37059712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 45256021 - 45255982
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45256021 tttatgcacggtgcataaggatttccttatgcaccataac 45255982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 50643789 - 50643750
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  50643789 tttatgcacggtgcataaggatttccttatgcaccataac 50643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 53865243 - 53865286
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  53865243 ggatttatgcagggtgcataaggatttccttatgcaccataacc 53865286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 1492715 - 1492673
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  1492715 gatttatgcagggtgcataaggatttccttatgcaccataacc 1492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 29826669 - 29826604
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||| ||| |||||||||||||||||    
T  29826669 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 29826604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 33819734 - 33819692
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataacc 33819692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 525
Target Start/End: Complemental strand, 50070759 - 50070713
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  50070759 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccg 50070713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 1728669 - 1728620
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  1728669 ggatttatgcacggtacataagaattttcttatgcaccataaccactccc 1728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 2124386 - 2124345
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  2124386 atttatgcagggtgcataaggatttccttatgcaccataacc 2124345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 6841863 - 6841822
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  6841863 atttatgcagggtgcataaggatttccttatgcaccataacc 6841822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 8157290 - 8157331
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  8157290 gatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 9813147 - 9813188
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  9813147 atttatgcagggtgcataaagatttccttatgcaccataacc 9813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 31763110 - 31763151
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  31763110 atttatgcagggtgcataaggatttccttatgcaccataacc 31763151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 36309460 - 36309419
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  36309460 ggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 510
Target Start/End: Complemental strand, 48076958 - 48076921
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  48076958 tgggatttatgcacggtgcataaggatttccttatgca 48076921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 55782641 - 55782686
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  55782641 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 55782686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 55846821 - 55846866
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  55846821 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 55846866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 637883 - 637919
Alignment:
Q  375 ttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||| |||||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagat 637919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 523
Target Start/End: Complemental strand, 14499291 - 14499247
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  14499291 ttatgcacggtgcataaggaaatccttatgcaccataaccactcc 14499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 524
Target Start/End: Original strand, 21098133 - 21098181
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  21098133 gatttatgcatggtgcataaggatttccttatacaccataaccgctccc 21098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 26447431 - 26447467
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccat 514  Q
    |||||||||||||||||| ||||||||||||||||||    
T  26447431 tttatgcacggtgcataaggatttccttatgcaccat 26447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 2124545 - 2124588
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  2124545 ggatttatgcagggtgcataagaatttccttatgcaccataacc 2124588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 12722938 - 12722981
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  12722938 ggatttatgcagggtgcataagaatttccttatgcaccataacc 12722981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 16475020 - 16475063
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  16475020 ggatttatgcaggatgcataaagatttccttatgcaccataacc 16475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 17109763 - 17109720
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  17109763 ggatttatgcaaggtacataaggatttccttatgcaccataacc 17109720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 25715727 - 25715770
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  25715727 ggatttatgcagggtgcataaggattttcttatgcaccataacc 25715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 43374491 - 43374448
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  43374491 ggatttatgcagggtacataaggatttccttatgcaccataacc 43374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 515
Target Start/End: Complemental strand, 51076940 - 51076901
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccata 515  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  51076940 gatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 54895448 - 54895405
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  54895448 ggatttatgcagggtgcataaggattttcttatgcaccataacc 54895405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 14497006 - 14497071
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |  |||||||||| |||||||   | |||||||||||||||    
T  14497006 ggcaaaagttatggtgcataagcca-taacttatgcaccatgcataaggtcttcacaaccatcagat 14497071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 517
Target Start/End: Original strand, 29826626 - 29826664
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  29826626 ttatgcacggtgcataaggatttccttatgtaccataac 29826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 36309618 - 36309660
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||    
T  36309618 gatttatgcagggtgcataaggattttcttatgcaccataacc 36309660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 50563794 - 50563729
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  ||||||||  ||||| | ||||||| ||||||||||| |||||||||||||||    
T  50563794 ggcaaaagttattatgcataagatatttcat-atgcaccctgcataaacacttcacaaccatcagat 50563729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 562817 - 562776
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||  ||||||||||||||||||||||    
T  562817 atttatgcagggtgcatagggatttccttatgcaccataacc 562776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 476
Target Start/End: Complemental strand, 9551654 - 9551625
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttggg 476  Q
    ||||||||||||||||||||||||||||||    
T  9551654 tttgggggtgtaggaagcaattatgttggg 9551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 10374087 - 10374046
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  10374087 ggatttatgcagggtgcataaagatttccttatacaccataa 10374046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 31762971 - 31762930
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  31762971 atttatgcaggatgcataaggatttccttatgcaccataacc 31762930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 33883336 - 33883295
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  33883336 atttatacagggtgcataaggatttccttatgcaccataacc 33883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 38010712 - 38010753
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  38010712 atttatgcagggtgcataaggatttccgtatgcaccataacc 38010753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 43375523 - 43375564
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  43375523 atttatgcagggtgcataaggatttccgtatgcaccataacc 43375564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 510
Target Start/End: Complemental strand, 50562716 - 50562679
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  50562716 tgggatttatgcacgatgcataaggatttccttatgca 50562679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 55660444 - 55660485
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| |||||| |||||||||||||||    
T  55660444 atttatgcaaggtgcataaagatttctttatgcaccataacc 55660485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 12722782 - 12722738
Alignment:
Q  475 ggatttatgcacgg-tgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||    
T  12722782 ggatttatgcaagggtgcataaggatttccttatgcaccataacc 12722738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 38485710 - 38485674
Alignment:
Q  375 ttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||| | |||||||||||||||    
T  38485710 ttatgcaccgtgcataaacgcttcacaaccatcagat 38485674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 510
Target Start/End: Original strand, 48077864 - 48077896
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgca 510  Q
    |||||||||||||||||| ||||||||||||||    
T  48077864 tttatgcacggtgcataaggatttccttatgca 48077896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 6e-88; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 26662604 - 26662424
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26662604 ggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 26662505  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  26662504 actttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactcccg 26662424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 9596046 - 9595867
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 9595947  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9595946 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 9595867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 9106267 - 9106447
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9106267 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatggttttggctc 9106366  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9106367 actttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 9106447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 30947977 - 30947797
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  30947977 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaatcatcaaatttctttcattttgaacaaaaatggttttggctc 30947878  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30947877 acttttggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 30947797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 2941992 - 2941812
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2941992 ggcaaaagttatggtgcataagttatttccttatgtaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 2941893  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  2941892 actttgggggtgtagaaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataatcactcccg 2941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 3475473 - 3475294
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 3475374  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3475373 actttggagatgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 3475294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 19284671 - 19284850
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttgactc 19284770  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19284771 actttggggatgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 19284850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 344 - 525
Target Start/End: Complemental strand, 46237825 - 46237644
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  46237825 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 46237726  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  46237725 cactttgggggagtatgaagcaattatgttgggatttatgcacggtgtataaggatttccttatgcaccataaccactcccg 46237644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 6097750 - 6097570
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  6097750 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcataactatcagatttcttttattttgaacaaaaatggttttggctc 6097651  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6097650 actttaagggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 6097570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 346 - 524
Target Start/End: Complemental strand, 33414078 - 33413899
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctca 445  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttaaataaaaatggttttggctca 33413979  T
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa-tgatttccttatgcaccataaccactccc 524  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  33413978 ctttgagggtgtaggaagcaattatattgggatttatgcacggtgcataagggatttccttatgcaccataaccactccc 33413899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 54379163 - 54379341
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  54379163 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatgg-tttggctc 54379261  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54379262 acattggaggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 54379341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 349 - 524
Target Start/End: Original strand, 26960630 - 26960805
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctcactt 448  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  26960630 aaagttatggtgtataagttatttccttatgcaccgtgcataaacacattacaatcatcaggtttcttttattttgaacaaaaatggttttggctcactt 26960729  T
Q  449 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26960730 tgggggtgtaggaagcaattatattgggatttatgcacggtgcataaagatttccttatgcaccataaccactccc 26960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 345 - 526
Target Start/End: Original strand, 47335032 - 47335218
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatgattttggctc 47335131  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcat-----aatgatttccttatgcaccataaccactcccgc 526  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||     || ||||||||||||||||||||||||||||||    
T  47335132 actttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggaaaggatttccttatgcaccataaccactcccgc 47335218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 10986351 - 10986532
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||| || |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||    
T  10986351 gggcaaaagttatgatgtataagttatttccttatgcaccgtgcataaacacatcataaccatcagatttcttttattttaaacaaaaatggttttgact 10986450  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10986451 cactttgaggatgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 10986532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 50755163 - 50755234
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50755163 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataac 50755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 19384454 - 19384376
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  19384454 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagaatttccttatgcaccataaccgctccc 19384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 51361596 - 51361518
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  51361596 ctttaggggtgtaggaagcaattatgttaggatttatacacggtgcataaggatttccttatgcaccataaccgctccc 51361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 51846843 - 51846785
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 171 - 315
Target Start/End: Original strand, 15832312 - 15832461
Alignment:
Q  171 agcatatgaataaaaggaggaagaaataataagcaaaa---cctagcttggcgtgcaagttacccaactaacaacatttgaatttacttgtaatt-tcat 266  Q
    |||||||||| |||| |||||||||| ||||||  |||   |||||||||||| |||||||||  ||||| |  ||||||||||||||||||||| | ||    
T  15832312 agcatatgaagaaaaagaggaagaaacaataagagaaaaaccctagcttggcgcgcaagttacttaactagct-catttgaatttacttgtaattataat 15832410  T
Q  267 ttacatttcaca--catttagttagttaaggtagttgctatgagctggcat 315  Q
    |||||||||||   |||||||||||||| ||||||| ||||||||||||||    
T  15832411 ttacatttcactttcatttagttagttagggtagttactatgagctggcat 15832461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 41192419 - 41192355
Alignment:
Q  342 atgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  41192419 atggggaaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttcacaaccat 41192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 471 - 525
Target Start/End: Original strand, 8719133 - 8719187
Alignment:
Q  471 gttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  8719133 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccg 8719187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 471 - 525
Target Start/End: Original strand, 9071020 - 9071074
Alignment:
Q  471 gttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  9071020 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccg 9071074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 34563410 - 34563352
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  34563410 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacatttcacaaccat 34563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 51362504 - 51362436
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  51362504 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 51362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 51682068 - 51681999
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttc 414  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| || |||||||||||||||    
T  51682068 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcgcaaccatcagatttc 51681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 19385380 - 19385313
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 19385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 34562442 - 34562394
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34562442 gatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34562394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 47728388 - 47728456
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||  |||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||    
T  47728388 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaccatcagattt 47728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 53594972 - 53595036
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  53594972 aaagttattatgcataagccattttcttatgcaccctgcataaacacttcacaaccatcagattt 53595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 453 - 495
Target Start/End: Original strand, 31853164 - 31853206
Alignment:
Q  453 ggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31853164 ggtgtaggaagcaattatgttgggatttatgcacggtgcataa 31853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 23755284 - 23755344
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaacc 404  Q
    |||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  23755284 gggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaacc 23755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 7045365 - 7045300
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | ||| |||||||||||| |||||||| |||||||||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattc-ttatgcaccgtgtataaacacttcacaaccatcagat 7045300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 16276713 - 16276664
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  16276713 ggatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 16276664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 23699326 - 23699390
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23699326 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 23717781 - 23717845
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23717781 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23717845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 23736237 - 23736301
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||  |||||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23736237 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 41191452 - 41191404
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  41191452 gatttatgcacggtgcataagaatttccctatgcaccataaccactccc 41191404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 50754008 - 50754071
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  50754008 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 50754071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 8036844 - 8036801
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  8036844 ggatttatgcagggtgcataaggatttccttatgcaccataacc 8036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 411
Target Start/End: Original strand, 8718100 - 8718166
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||  | | ||||||||||||| |||||| || |||||||||||||||    
T  8718100 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 8718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 411
Target Start/End: Original strand, 9069987 - 9070053
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||  | | ||||||||||||| |||||| || |||||||||||||||    
T  9069987 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 9070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 16277433 - 16277472
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16277433 tttatgcacggtgcataaagatttccttatgcaccataac 16277472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 19385334 - 19385373
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19385334 tttatgcacggtgcataaggatttccttatgcaccataac 19385373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 32232993 - 32233048
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||    
T  32232993 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 32233048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 36185905 - 36185948
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  36185905 ggatttatgcagggtgcataaggatttccttatgcaccataacc 36185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 50416524 - 50416481
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  50416524 ggatttatgcagggtgcataaggatttccttatgcaccataacc 50416481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 50416564 - 50416607
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  50416564 ggatttatgcagggtgcataaggatttccttatgcaccataacc 50416607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 51362457 - 51362496
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  51362457 tttatgcacggtgcataaggatttccttatgcaccataac 51362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 52987689 - 52987650
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  52987689 tccttatgcaccgtgcataaacacttcacaaccatcagat 52987650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 28300018 - 28299952
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||| ||||  |||||||| |||||||||||| ||| ||||||||||| ||||||| |||||||    
T  28300018 ggcaaaaattattatgcataagtcatttccttatgtaccatgcataaacacttcacaactatcagat 28299952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 521
Target Start/End: Complemental strand, 17620771 - 17620734
Alignment:
Q  484 cacggtgcataatgatttccttatgcaccataaccact 521  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17620771 cacggtgcataaggatttccttatgcaccataaccact 17620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 47924367 - 47924408
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  47924367 gatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 8718148 - 8718108
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  8718148 atttatgtacggtgcataaggatttccttatgcaccataac 8718108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 9070035 - 9069995
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  9070035 atttatgtacggtgcataaggatttccttatgcaccataac 9069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 517
Target Start/End: Original strand, 27446215 - 27446255
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  27446215 atttatgcaaggtgcataaggatttccttatgcaccataac 27446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 37319522 - 37319458
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||| ||||| |||||||||| ||||||||||| |||||  ||||||||||    
T  37319522 aaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacattcatcagattt 37319458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 7044430 - 7044387
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggt 489  Q
    ||||||||||||| |||||||||||||| | |||||||||||||    
T  7044430 ctttgggggtgtaagaagcaattatgttagaatttatgcacggt 7044387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 8036989 - 8037032
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||    
T  8036989 ggatttatgcagggtgcataaggatttcctcatgcaccataacc 8037032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 12974056 - 12974013
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||    
T  12974056 ggatttaggcagggtgcataaggatttccttatgcaccataacc 12974013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 12974191 - 12974233
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  12974191 ggatttatgca-ggtgcataaggatttccttatgcaccataacc 12974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 16277475 - 16277417
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    ||||||||||||||||||  | | | ||||||||||||||||||||| ||||||||||||    
T  16277475 aaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatca 16277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 19012562 - 19012605
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  19012562 ggatttatgcagggtgcataagaatttccttatgcaccataacc 19012605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 36185770 - 36185727
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  36185770 ggatttatgcaggatgcataaggatttccttatgcaccataacc 36185727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 38345324 - 38345281
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||    
T  38345324 ggatttatgcagggtgcataaagatttctttatgcaccataacc 38345281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 49053426 - 49053469
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||    
T  49053426 ggatttatgcagggtggataaagatttccttatgcaccataacc 49053469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 50754052 - 50754013
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  50754052 tttatgcacggtgcataaggatttccttatgtaccataac 50754013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 8054713 - 8054778
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |  |||||||||| |||||||    ||||||||||||||||    
T  8054713 ggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 8054778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 9180157 - 9180111
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    |||||||||||||||||||||| | || ||||||||||| |||||||    
T  9180157 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 9180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 411
Target Start/End: Original strand, 39099220 - 39099262
Alignment:
Q  369 atttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||| |  |||||||||||||||    
T  39099220 atttccttatgcaccgtgcataaatatttcacaaccatcagat 39099262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 47225848 - 47225890
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||    
T  47225848 ggatttatgcagggtacataaggatttccttatgcaccataac 47225890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 21175268 - 21175309
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| |||||||| |||||||||||    
T  21175268 ggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 510
Target Start/End: Original strand, 23756295 - 23756332
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgca 510  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  23756295 tgggatttatccacggtgcataaggatttccttatgca 23756332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 40220788 - 40220833
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||    
T  40220788 ttatgcacggtgcataagaaaatccttatgcaccataaccactccc 40220833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 476
Target Start/End: Original strand, 47729134 - 47729163
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttggg 476  Q
    ||||||||||||||||||||||||||||||    
T  47729134 tttgggggtgtaggaagcaattatgttggg 47729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 511
Target Start/End: Original strand, 52987669 - 52987702
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcac 511  Q
    |||||||||||||||||| |||||||||||||||    
T  52987669 tttatgcacggtgcataaggatttccttatgcac 52987702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 23700056 - 23700084
Alignment:
Q  448 ttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||    
T  23700056 ttgggggtgtaggaagcaattatgttggg 23700084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 23718511 - 23718539
Alignment:
Q  448 ttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||    
T  23718511 ttgggggtgtaggaagcaattatgttggg 23718539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 23736967 - 23736995
Alignment:
Q  448 ttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||    
T  23736967 ttgggggtgtaggaagcaattatgttggg 23736995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 6e-88; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 344 - 524
Target Start/End: Complemental strand, 20434789 - 20434609
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  20434789 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccattagatttctttcattttgaacaaaaatgattttggct 20434690  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20434689 cactttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataatgatttccttatgcaccataaccactccc 20434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 24635926 - 24636105
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 24636025  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24636026 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 24636105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 345 - 521
Target Start/End: Complemental strand, 49937003 - 49936827
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgattttggctc 49936904  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccact 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49936903 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccact 49936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 48762397 - 48762217
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  48762397 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccattagatttcttttattttgaacaaaaatggttttggctc 48762298  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48762297 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 48762217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 25889094 - 25888916
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25889094 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 25888995  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  25888994 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataagga-ttccttatgcaccataaccactccc 25888916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 43452542 - 43452721
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  43452542 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaactatcagatttcttttattttgaacaaaaatggttttggctc 43452641  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43452642 actttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 43452721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 19897826 - 19897646
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  19897826 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 19897727  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  19897726 actttggaggtgtaggaagcaattatgttgggatttctgcacggtgcataaggatttccttatgcaccataaccactcccg 19897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 16975954 - 16976135
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaa-atggttttggct 443  Q
    ||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16975954 ggcaaaagttatggttcataagttatttccttatgcaccgtgtataaacacatcacaaccatcagatttcttttattttgaacaaaaaatggttttggct 16976053  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16976054 cactttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 16976135  T

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Target: chr1; HSP #9
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 6314115 - 6314295
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaa-atggttttggct 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  6314115 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacagccatcaaatttctttcattttgaacaaaaaatggttttggct 6314214  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  6314215 cactttggggatgtaggaagcaattatgttgggatttatatacggtgcataaggatttccttatgcaccataaccactccc 6314295  T

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Target: chr1; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 18618835 - 18619013
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  18618835 ggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaattgttttggctc 18618934  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||    
T  18618935 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagga-ttccttatgcaccataactactccc 18619013  T

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Target: chr1; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 345 - 495
Target Start/End: Original strand, 50351803 - 50351953
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctatcattttgaacaaaaatggttatggctc 50351902  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50351903 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 50351953  T

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Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 28375461 - 28375567
Alignment:
Q  342 atgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttgg 441  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||     
T  28375461 atgggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagattttttttattttaaacaaaaatagttttga 28375560  T
Q  442 ctcactt 448  Q
    |||||||    
T  28375561 ctcactt 28375567  T

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Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 23817412 - 23817489
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23817412 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 23817489  T

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Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 424
Target Start/End: Original strand, 34369659 - 34369739
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  34369659 gggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagatttctttcattttg 34369739  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 4097974 - 4097895
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatcaaatttctttcattttg 4097895  T

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Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 446 - 524
Target Start/End: Original strand, 11422541 - 11422619
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  11422541 ctttgggggtgtaggaagcaattatgttggaatttatgcacgatgcataaggatttccttatgcaccataaccgctccc 11422619  T

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Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 11421594 - 11421671
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattt 422  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  11421594 ggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagatttctttcattt 11421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 524
Target Start/End: Complemental strand, 23921043 - 23920966
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  23921043 tttgggggtgtaggaaacaattatgttgggatttatgcacgatgcataaggatttccttatgcaccataaccgctccc 23920966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 446 - 518
Target Start/End: Complemental strand, 23174475 - 23174403
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  23174475 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagaattttcttatgcaccataacc 23174403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 23175585 - 23175509
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||    
T  23175585 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaaccatcaaatttctttcattttg 23175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 21641667 - 21641588
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||    
T  21641667 ctttggtggtgtaggaagcaattatgttgggatttgtgcacggtgcataaggatttccttatgcagcataaccgctcccg 21641588  T

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Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 4097182 - 4097105
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||    
T  4097182 ctttgggggtgtaggaagcaattatgttgggatttaagcacggtgcataagga-ttccttatgcaccataaccgctccc 4097105  T

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Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 180825 - 180902
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| |||| |||||||||| |||||    
T  180825 tttgggagtgtaggaagcaattatgttgggatttatacacggtgcataaggatttctttatacaccataaccgctccc 180902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 21256835 - 21256777
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21256835 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 31529727 - 31529663
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  31529727 aaagttattatgcataagccatttccttatgcaccatgcataaacacttcacaaccatcagattt 31529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 37639341 - 37639407
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  37639341 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 37639407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 33097409 - 33097473
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  33097409 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 33097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 21255886 - 21255835
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21255886 tgggatttatgcacggtgtataaggatttccttatgcaccataaccactccc 21255835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 18056784 - 18056849
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18056849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 31083365 - 31083423
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  31083365 aaaagttatggtgcataagccatttccttatgtaccattcataaacacttcacaaccat 31083423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 35198247 - 35198181
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||| |||||||||    
T  35198247 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacagccatcagat 35198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 34370488 - 34370537
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  34370488 ctttggaggtgtaggaagcaattatgttaggatttatgcacggtgcataa 34370537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 51801795 - 51801734
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcaga 410  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  51801795 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 51801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 31084404 - 31084452
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  31084404 atttatgcacggtacataaggatttccttatgcaccataaccactcccg 31084452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 44260522 - 44260586
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  ||| |||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  44260522 aaagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 44260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 44688672 - 44688608
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||| |||||||||||||||  ||||||||||| |||||||||||||||||    
T  44688672 aaagttatcatgcataagtcatttccttatgcacgctgcataaacacttcacaaccatcagattt 44688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 18057807 - 18057858
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  18057807 tgggatttatgcacggtgcataaggatttccttatacaccataaccgctccc 18057858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 20507349 - 20507286
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||| |  ||||||||||    
T  20507349 tgggaaaaagttatggtgcataagccatttccttatgcattgtgcataaatatttcacaaccat 20507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 37228403 - 37228364
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37228403 gttatggtgcataagccatttccttatgcaccgtgcataa 37228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 525
Target Start/End: Complemental strand, 17893116 - 17893066
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  17893116 ggatttatgcagggtgcataaggatttccttatgcaccataaccacgcccg 17893066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 495
Target Start/End: Complemental strand, 8401475 - 8401426
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  8401475 ctttggaggtgtaggaaacaattatgttgggatttatgcacggtacataa 8401426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 9628599 - 9628642
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  9628599 ggatttatgcagggtgcataaggatttccttatgcaccataacc 9628642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 14229361 - 14229404
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  14229361 ggatttatgcagggtgcataaagatttccttatgcaccataacc 14229404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 18056830 - 18056791
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18056830 tttatgcacggtgcataaggatttccttatgcaccataac 18056791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 18928955 - 18928998
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  18928955 ggatttatgcagggtgcataaagatttccttatgcaccataacc 18928998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 22348039 - 22348101
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    ||||||||||||||||||||||  | | |||||||||||| |||||||||| ||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgcgcataaacacttcacaaccatca 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 33157036 - 33156993
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  33157036 ggatttatgcagggtgcataaggatttccttatgcaccataacc 33156993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 33157180 - 33157223
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  33157180 ggatttatgcagggtgcataatgatttccttatccaccataacc 33157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 41033985 - 41033946
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  41033985 gttatggtgcataagtcatttccttatgcaccgtgcataa 41033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 42134133 - 42134176
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  42134133 ggatttatgcagggtgcataaggatttccttatgcaccataacc 42134176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 28323400 - 28323330
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||  |||||||| |||||  ||||||||| | |||||||||  ||||||||||||||||    
T  28323400 tgggcaaaagttattatgcataagtcatttttttatgcaccctccataaacactacacaaccatcagattt 28323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 526
Target Start/End: Original strand, 32595284 - 32595334
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactcccgc 526  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||| |||||    
T  32595284 gatttaagcagggtgcataaggatttccttatgcaccataaccacgcccgc 32595334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 1395353 - 1395394
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  1395353 atttatgcatggtgcataaggatttccttatgcaccataacc 1395394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 10974675 - 10974634
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  10974675 atttatgcagggtgcataaggatttccttatgcaccataacc 10974634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 14229214 - 14229173
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  14229214 atttatgcagggtgcataaggatttccttatgcaccataacc 14229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 17893275 - 17893316
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  17893275 atttatgcagggtgcataaggatttccttatgcaccataacc 17893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 41033262 - 41033322
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||||||  ||||||||||||||| | |||||| | |||||||||||    
T  41033262 ggcaaaagttatggtgcataag-gatttccttatgcaccatacataaagaaatcacaaccat 41033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 45849152 - 45849111
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  45849152 ggatttatgcagggtgcataaggatttccttatgcaccataa 45849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 13590469 - 13590517
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacac 395  Q
    ||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  13590469 caaaagttattatgcataagtcatttccttatgcaccctgcataaacac 13590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 16115877 - 16115913
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16115877 tccttatgcaccgtgcataaacacttcacaaccatca 16115913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 518
Target Start/End: Original strand, 9041055 - 9041094
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  9041055 ttatgcagggtgcataaggatttccttatgcaccataacc 9041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 12796467 - 12796424
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||| || ||||||||||||||||||||||    
T  12796467 ggatttatgcaaggtgcagaaggatttccttatgcaccataacc 12796424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Complemental strand, 18928822 - 18928783
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccat 514  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  18928822 ggatttatgcagggtgcataaggatttccttatgcaccat 18928783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 22348085 - 22348046
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  22348085 tttatgcgcggtgcataaggatttccttatgcaccataac 22348046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 523
Target Start/End: Complemental strand, 23319058 - 23319011
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    ||||||||||| |||||||| ||||||||||| |||||||||| ||||    
T  23319058 gatttatgcacagtgcataaggatttccttatccaccataaccgctcc 23319011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 31763973 - 31764016
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||    
T  31763973 ggatttatgtagggtgcataaggatttccttatgcaccataacc 31764016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 32595148 - 32595105
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  32595148 ggatttatgcagggtgcataagaatttccttatgcaccataacc 32595105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 45890595 - 45890642
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||| ||||| ||||| |||||||||| |||||    
T  45890595 atttatgcacggtgcataaggattttcttatacaccataaccgctccc 45890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 32143770 - 32143812
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||  |||||||| ||||||||||||||||||||||    
T  32143770 gatttatgcagagtgcataaggatttccttatgcaccataacc 32143812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 42133987 - 42133945
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| | ||||||| ||||||||||||||||||||||    
T  42133987 gatttatgcaggatgcataaggatttccttatgcaccataacc 42133945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 12070612 - 12070653
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  12070612 atttatgcagggtgcataagaatttccttatgcaccataacc 12070653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 13673891 - 13673948
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||| ||||  |||||||| |||||||||||||||| || |||||||| ||||||    
T  13673891 ggcaaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaa 13673948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 475
Target Start/End: Original strand, 16116998 - 16117027
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgg 475  Q
    ||||||||||||||||||||||||||||||    
T  16116998 ctttgggggtgtaggaagcaattatgttgg 16117027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 17811285 - 17811326
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  17811285 atttatacagggtgcataaggatttccttatgcaccataacc 17811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 19861717 - 19861758
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||||||||||||| ||  ||||||||||||||||||||    
T  19861717 ttatgcacggtgcataaggaaatccttatgcaccataaccac 19861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 20372205 - 20372262
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||| ||||  |||||||| ||||| |||||||||| ||||||||||| ||||||    
T  20372205 ggcaaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 20372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 476
Target Start/End: Complemental strand, 23319107 - 23319078
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttggg 476  Q
    ||||||||||||||||||||||||||||||    
T  23319107 tttgggggtgtaggaagcaattatgttggg 23319078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 23921964 - 23921896
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||| |||||||||  | | ||||||||| ||||||||| ||| ||| |||||||||||||    
T  23921964 gggcaaaagttattgtgcataaggaaat-ccttatgcatcgtgcataagcacttcataaccatcagattt 23921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 29945418 - 29945459
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  29945418 atttatgcagagtgcataaggatttccttatgcaccataacc 29945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 31763817 - 31763776
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  31763817 atttatgcagggtgtataaggatttccttatgcaccataacc 31763776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 45849309 - 45849350
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| |||||||||  |||||||||||||||||||    
T  45849309 ggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 14389888 - 14389852
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcac 511  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  14389888 ggatttatgcagggtgcataaggatttccttatgcac 14389852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 510
Target Start/End: Complemental strand, 16115897 - 16115865
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgca 510  Q
    |||||||||||||||||| ||||||||||||||    
T  16115897 tttatgcacggtgcataaggatttccttatgca 16115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 46590760 - 46590800
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||| || ||||||||| ||||||||||||||||||||    
T  46590760 gatttatacagggtgcataaagatttccttatgcaccataa 46590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 26637903 - 26637724
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26637903 ggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttggctc 26637804  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26637803 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 26637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 349 - 524
Target Start/End: Complemental strand, 14940418 - 14940243
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctcactt 448  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 14940319  T
Q  449 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14940318 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 14940243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 344 - 524
Target Start/End: Original strand, 14394467 - 14394647
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  14394467 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaatacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 14394566  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14394567 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 14394647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 37456680 - 37456859
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  37456680 ggcaaaagttatggtgcatgagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttcattttgaacaaaaatagttttggctc 37456779  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  37456780 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccactccc 37456859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 344 - 524
Target Start/End: Complemental strand, 3884102 - 3883922
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  3884102 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcaaatttctttcattttgaacaaaaatggttttggct 3884003  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3884002 cactttggaggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 3883922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 340 - 524
Target Start/End: Original strand, 15416659 - 15416843
Alignment:
Q  340 tcatgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggtttt 439  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15416659 tcatcggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggtttt 15416758  T
Q  440 ggctcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  15416759 ggctcactttgggagtgtaggaagcaatcatgttgggatttatgcacggtgcataaggatttccttatgcatcataaccactccc 15416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 13552983 - 13553162
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 13553082  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||  |||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13553083 actttgaaggtgtaggaagcaattatattaggatttatacacggtgcataaggatttccttatgcaccataaccactccc 13553162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 524
Target Start/End: Original strand, 30783538 - 30783636
Alignment:
Q  425 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  30783538 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgtt-ggatttatgcacggtgcataaggatttccttatgcatcataaccactccc 30783636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 30783434 - 30783516
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaa 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30783434 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcgcaaccatcagatttctttcattttgaa 30783516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 28069320 - 28069242
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||| |||||    
T  28069320 ctttgggtgtgtaggaagcaattatgttggaatttatgctcggtgcataaggatttccttatacaccataaccgctccc 28069242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 16552706 - 16552637
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  16552706 gggcaaaagttattatgcataagtcatttccttatgcaccatgcataaacacttcacaaccatcatattt 16552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 33868154 - 33868223
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  33868154 gggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 33868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 16668858 - 16668794
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  16668858 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 16668794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 13362772 - 13362835
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  13362772 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 13362835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 23334756 - 23334705
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  23334756 tgggatttatgcacggtgcataa-gatttccttatgcaccataaccattcccg 23334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 25017280 - 25017217
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  25017280 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 25017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 13363792 - 13363842
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcc 523  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  13363792 tgggatttatgcacggtgcataaggatttccttgtgcaccataaccgctcc 13363842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 28070218 - 28070153
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||| |||||||    
T  28070218 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 28070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 34329127 - 34329192
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatcagat 34329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 34330157 - 34330211
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatt 500  Q
    |||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  34330157 ctttggggatgtatgaagcaattatgttggaatttatgcacggtgcataaggatt 34330211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 4674965 - 4675025
Alignment:
Q  350 aagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcaga 410  Q
    |||||||  ||| |||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  4674965 aagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 4675025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 18465620 - 18465556
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||  |||||||| |||||| ||||||| | ||||||||||| |||||||||||||||    
T  18465620 caaaagttattatgcataagacatttcattatgcatcctgcataaacacttcacaaccatcagat 18465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 23155567 - 23155519
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  23155567 atttatgcagggtgcataaggatttccttatgcaccataaccacacccg 23155519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 23948588 - 23948632
Alignment:
Q  482 tgcacggtgcataatgatttccttatgcaccataaccactcccgc 526  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||    
T  23948588 tgcacggtgcataaggattttcttatgcaccataaccactcccgc 23948632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 11660982 - 11661025
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  11660982 ggatttatgcagggtgcataaggatttccttatgcaccataacc 11661025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 13362816 - 13362777
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  13362816 tttatgcacggtgcataaggatttccttatgcaccataac 13362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 22695540 - 22695583
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  22695540 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 22695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 25017236 - 25017275
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25017236 tttatgcacggtgcataaggatttccttatgcaccataac 25017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 28070172 - 28070211
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28070172 tttatgcacggtgcataaggatttccttatgcaccataac 28070211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 34329173 - 34329134
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34329173 tttatgcacggtgcataaagatttccttatgcaccataac 34329134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 39861780 - 39861823
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  39861780 ggatttatgcagggtgcataaggatttccttatgcaccataacc 39861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 23335772 - 23335707
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | || |||||||||||||||||||  |||||||||||||||    
T  23335772 ggcaaaagttatggtgcataaggaaat-ccgtatgcaccgtgcataaacatttcacaaccatcagat 23335707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 525
Target Start/End: Complemental strand, 25189862 - 25189816
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  25189862 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccg 25189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 3340632 - 3340591
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  3340632 atttatgcagggtgcataaggatttccttatgcaccataacc 3340591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 15559091 - 15559050
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  15559091 atttatgcatggtgcataaggatttccttatgcaccataacc 15559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 510
Target Start/End: Complemental strand, 16667704 - 16667667
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16667704 tgggatttatgcacggtgcataaggatttccttatgca 16667667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 20134243 - 20134200
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  20134243 ggatttatgcaggctgcataaggatttccttatgcaccataacc 20134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 20134399 - 20134442
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||||  |||||||| ||||||||||||||||||||||    
T  20134399 ggatttatgcagagtgcataaggatttccttatgcaccataacc 20134442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 20696327 - 20696370
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||    
T  20696327 ggatttatgcagggtgaataaggatttccttatgcaccataacc 20696370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 22671997 - 22672040
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||    
T  22671997 ggatttatgcaggatgcataaggatttccttatgcaccataacc 22672040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 23335726 - 23335765
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  23335726 tttatgcacggtgcatacggatttccttatgcaccataac 23335765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Original strand, 25671290 - 25671333
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||    
T  25671290 atttatgcatggtacataaggatttccttatgcaccataaccac 25671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 35662111 - 35662068
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||    
T  35662111 ggatttatgtagggtgcataaggatttccttatgcaccataacc 35662068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 35662233 - 35662276
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  35662233 ggatttatgcagggtgcataagtatttccttatgcaccataacc 35662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 39861623 - 39861580
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  39861623 ggatttatgcagggtgcataaggatttccttatgccccataacc 39861580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 42512225 - 42512264
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  42512225 tccttatccaccgtgcataaacacttcacaaccatcagat 42512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 476
Target Start/End: Complemental strand, 16667751 - 16667721
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||||    
T  16667751 ctttgggggtgtaggaagcaattatgttggg 16667721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 22830788 - 22830830
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||  |||||||| |||||||||||||||||||||    
T  22830788 ggatttatgcagtgtgcataaggatttccttatgcaccataac 22830830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 23155843 - 23155885
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||    
T  23155843 ggatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 475
Target Start/End: Complemental strand, 2826127 - 2826098
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgg 475  Q
    ||||||||||||||||||||||||||||||    
T  2826127 ctttgggggtgtaggaagcaattatgttgg 2826098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 5630271 - 5630312
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| |||||||| |||||||||||    
T  5630271 ggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 7286795 - 7286754
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  7286795 atttatgcagggtgcataaagatttccttatacaccataacc 7286754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 11660835 - 11660794
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||| | ||||||||| ||||||||||||||||||||||    
T  11660835 atttatgtagggtgcataaggatttccttatgcaccataacc 11660794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 16552289 - 16552248
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||  ||||||||||||||||||||||    
T  16552289 atttatgcagggtgcatacggatttccttatgcaccataacc 16552248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 39086559 - 39086518
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||    
T  39086559 atttatgcagggtgcataaggattttcttatgcaccataacc 39086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 39166195 - 39166150
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    ||||||||||| |||||||||  ||||||||||||||| |||||||    
T  39166195 ggatttatgcagggtgcataagaatttccttatgcaccgtaaccac 39166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 39166342 - 39166383
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||    
T  39166342 atttatgcagggtgcataaggattttcttatgcaccataacc 39166383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 703772 - 703732
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||| | ||||||| |||||||||||||||||||||    
T  703772 atttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 15059633 - 15059677
Alignment:
Q  475 ggatttatgcacggtgcataatg-atttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||    
T  15059633 ggatttatgcagggtgcataagggatttccttatgcaccataacc 15059677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 160; Significance: 5e-85; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 24274 - 24453
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  24274 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcacaaccattaaatttctttgattttgaacaaaaatggttttggttc 24373  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24374 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 24453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 524
Target Start/End: Complemental strand, 44814 - 44777
Alignment:
Q  487 ggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||  |||||||||||||||||||||||||||    
T  44814 ggtgcataagaatttccttatgcaccataaccactccc 44777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 5e-85; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 7487320 - 7487141
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  7487320 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 7487221  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7487220 actttggaggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 7487141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 15016632 - 15016452
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15016533  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  15016532 actttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataagaatttccttatgcaccataaccactcccg 15016452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 8149831 - 8150010
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8149831 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8149930  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  8149931 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8150010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 8154455 - 8154634
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8154455 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8154554  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  8154555 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8154634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 39355035 - 39355214
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 39355134  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39355135 gctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 39355214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 345 - 525
Target Start/End: Complemental strand, 1292245 - 1292065
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1292245 ggcaaaagttatggtgcataagttattttcttatgcaccgtacataaacacatcacaaccatcagatttcttttattttgaacaaaaatggtttttgctc 1292146  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1292145 attttgggggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactcccg 1292065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 347 - 522
Target Start/End: Original strand, 34464713 - 34464888
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctcac 446  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34464713 caaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcac 34464812  T
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  34464813 tttaggggtgtaggaagcaattatgtttggatttatgcacggtgcataaggatttccttatggaccataaccactc 34464888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 345 - 486
Target Start/End: Original strand, 9143585 - 9143726
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||    
T  9143585 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttgactc 9143684  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcac 486  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  9143685 actttgggggtgtaggaagcaattatgttggaatttatgcac 9143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 18297241 - 18297162
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  18297241 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccctatgcaccataaccgctcccg 18297162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 518
Target Start/End: Original strand, 25193962 - 25194034
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  25193962 ctttgggggtgtaggaaacaattatattgggatttatgcacggtgcataaggatttcattatgcaccataacc 25194034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 2263573 - 2263652
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttg 424  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||| ||| ||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatcgcatttatttcattttg 2263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 406
Target Start/End: Original strand, 18762866 - 18762928
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18762866 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 18762928 - 18762987
Alignment:
Q  436 ttttggctcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  18762928 ttttggctcactttggaagtgtaggaagcaattatgttgggatttatgtacggtgcataa 18762987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 41345129 - 41345082
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41345129 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 41345082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 5098718 - 5098784
Alignment:
Q  347 caaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 5098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 18298176 - 18298111
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 41346103 - 41346045
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||    
T  41346103 aaaagttatggtgcataagccattttcttatgcaccgtatataaacacttcacaaccat 41346045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 25995285 - 25995354
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||  |||||||| |||||||||||||||  |||||||| || |||||||||||||||||    
T  25995285 gggcaaaagttattatgcataagacatttccttatgcactctgcataaatacttcacaaccatcagattt 25995354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 20661595 - 20661638
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20661595 ggatttatgcagggtgcataatgatttccttatgcaccataacc 20661638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 21155441 - 21155480
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21155441 gttatggtgcataagccatttccttatgcaccgtgcataa 21155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 27974330 - 27974291
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27974330 gttatggtgcataagccatttccttatgcaccgtgcataa 27974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 28060859 - 28060820
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28060859 gttatggtgcataagccatttccttatgcaccgtgcataa 28060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 4281858 - 4281788
Alignment:
Q  341 catgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||  |||||||| |||||||||||| ||  || |||||||| |||||||||||||||    
T  4281858 catgggcaaaagttattatgcataagacatttccttatgtactctgtataaacacttcacaaccatcagat 4281788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 20709774 - 20709839
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  20709774 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 20709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 25192892 - 25192957
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||| ||||    
T  25192892 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccattagat 25192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 494
Target Start/End: Original strand, 2264625 - 2264673
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcata 494  Q
    |||||||||||||||||||||||||||||| ||||||| || |||||||    
T  2264625 ctttgggggtgtaggaagcaattatgttggaatttatgtactgtgcata 2264673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 36637003 - 36636935
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||  |||||||| ||||| |||||| ||| | ||||||||| |||||||||||||||||    
T  36637003 ggcaaaagttattatgcataagtcattttcttatgtaccctacataaacacttcacaaccatcagattt 36636935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 39548058 - 39548110
Alignment:
Q  361 cataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39548058 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 39548110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 453 - 488
Target Start/End: Complemental strand, 4578625 - 4578590
Alignment:
Q  453 ggtgtaggaagcaattatgttgggatttatgcacgg 488  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578625 ggtgtaggaagcaattatgttgggatttatgcacgg 4578590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 16111705 - 16111748
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  16111705 ggatttatgcagggtgcataaagatttccttatgcaccataacc 16111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 18298130 - 18298169
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18298130 tttatgcacggtgcataaggatttccttatgcaccataac 18298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 25192938 - 25192899
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25192938 tttatgcacggtgcataaggatttccttatgcaccataac 25192899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 31783837 - 31783794
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  31783837 ggatttatgcagggtgcataaggatttccttatgcaccataacc 31783794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 34726648 - 34726605
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  34726648 ggatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 40853740 - 40853685
Alignment:
Q  350 aagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaacca 405  Q
    |||||||  ||||||||||||||||||||||| | ||||||||||| |||||||||    
T  40853740 aagttattatgcataagccatttccttatgcatcctgcataaacacttcacaacca 40853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 16142127 - 16142073
Alignment:
Q  359 tgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||| |||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  16142127 tgcacaagccatttccttatgcacgctgcataaacacttcacaaccattagattt 16142073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 20661439 - 20661397
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  20661439 gatttatgcagggtgcataaggatttccttatgcaccataacc 20661397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 12449245 - 12449286
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  12449245 atttatgcaaggtgcataaagatttccttatgcaccataacc 12449286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 14551382 - 14551319
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||  | ||| |||||||| |||||||||||| |||||||||||||||    
T  14551382 gcaaaagttatggtgcataaggaaattc-ttatgcac-gtgcataaacacttcacaaccatcagat 14551319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 24183599 - 24183640
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  24183599 atttatgcagggtgcataaggatttccttatgcaccataacc 24183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 510
Target Start/End: Original strand, 43823873 - 43823910
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgca 510  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43823873 tgggatttatgcacggtgcataaggatttccttatgca 43823910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 3925576 - 3925624
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    |||||||||||||||||||||||| | || ||||||||||| |||||||    
T  3925576 tgggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 3925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 13081922 - 13081858
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||| |||||| ||||||||| | ||||||||| ||||||||||| |||||    
T  13081922 aaagttattatgcataagtcatttcattatgcaccctacataaacacttcacaaccatctgattt 13081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 19246704 - 19246664
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  19246704 atttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 486
Target Start/End: Complemental strand, 14550500 - 14550465
Alignment:
Q  451 ggggtgtaggaagcaattatgttgggatttatgcac 486  Q
    |||||||||||||||||| |||||||||||||||||    
T  14550500 ggggtgtaggaagcaattttgttgggatttatgcac 14550465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 20709820 - 20709781
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  20709820 tttatgcacggtggataaggatttccttatgcaccataac 20709781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 22596348 - 22596305
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||    
T  22596348 ggatttatgcagggtgcataaggatttccttatacaccataacc 22596305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 22596504 - 22596547
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  22596504 ggatttatgcagggtacataaggatttccttatgcaccataacc 22596547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 31711554 - 31711511
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  31711554 ggatttatgcagggtacataaggatttccttatgcaccataacc 31711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 34726796 - 34726839
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  34726796 ggatttatgcagggtgcataagaatttccttatgcaccataacc 34726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 42364693 - 42364736
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||    
T  42364693 ggatttatgcagggtgcataaggatttccttttgcaccataacc 42364736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 44915491 - 44915534
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  44915491 ggatttatgcagggtgcataagcatttccttatgcaccataacc 44915534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 44352744 - 44352679
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |  |||||||||| |||||||    ||||||||||||||||    
T  44352744 ggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 44352679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 12449096 - 12449055
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  12449096 atttatgcagtgtgcataaggatttccttatgcaccataacc 12449055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 25575365 - 25575324
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  25575365 atttatgcaggatgcataaggatttccttatgcaccataacc 25575324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 37867196 - 37867155
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  37867196 atttatgcagggtggataaggatttccttatgcaccataacc 37867155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 37867357 - 37867398
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| |||||||||||||||| |||||    
T  37867357 atttatgcagggtgcataaggatttccttatgcaccgtaacc 37867398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 42364534 - 42364493
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||    
T  42364534 atttatgcagggtgcataaggattttcttatgcaccataacc 42364493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 44915333 - 44915292
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  44915333 atttatgcaggctgcataaagatttccttatgcaccataacc 44915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 15252883 - 15252847
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcac 511  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15252883 ggatttatgcagggtgcataaggatttccttatgcac 15252847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 24024685 - 24024633
Alignment:
Q  350 aagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    |||||||  |||||||| || ||||||||||||| ||||||||||| ||||||    
T  24024685 aagttattatgcataagtcaattccttatgcaccatgcataaacacttcacaa 24024633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 520
Target Start/End: Complemental strand, 36635798 - 36635754
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||    
T  36635798 gatttatgcacggtgcataaggatttctttatgcatgataaccac 36635754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 3e-83; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 41099182 - 41099364
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 41099281  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcata---atgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  41099282 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatgatttccttatgcaccataaccactccc 41099364  T

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Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 19784271 - 19784450
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 19784370  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  19784371 actttgagggtgtaggaagcaattatgttgggatttatgcacaatgcataaggatttccttatgcatcataaccactccc 19784450  T

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Target: chr8; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 10237354 - 10237534
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  10237354 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 10237453  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  10237454 actttgggggtgtagaaagcaattatgttgggatttatacacggtgcataaggatttccttatgcaccataaccactcccg 10237534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 344 - 524
Target Start/End: Complemental strand, 34633388 - 34633208
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 443  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34633388 gggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 34633289  T
Q  444 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34633288 cactttgagggtgtaagaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 41451105 - 41451284
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  41451105 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 41451204  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  41451205 actttggaggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatacaccataaccactccc 41451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 345 - 524
Target Start/End: Complemental strand, 1150089 - 1149910
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  1150089 ggcaaaagttatggtgcataagttattcccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctc 1149990  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1149989 actttggaggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 1149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 15227030 - 15227210
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15227129  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||  |  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15227130 actttaagaatgtaggaagcaattatgttgggatttatgtacggtgcataaggatttccttatgcaccataaccactcccg 15227210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 345 - 524
Target Start/End: Original strand, 30413914 - 30414093
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  30413914 ggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttacctc 30414013  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||| | | | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30414014 actctagagatgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataaccactccc 30414093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 345 - 489
Target Start/End: Original strand, 43690640 - 43690784
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  43690640 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 43690739  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggt 489  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  43690740 actttgggggtgtagaaagcaattatgttgggatttatgcacggt 43690784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 345 - 486
Target Start/End: Original strand, 7857680 - 7857821
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  7857680 ggcaaaagttatggtgcataagccattttcttatgcgccgtgcataaacacatcacaatcatcagatttttttaattttgaacaaaaatggttttggctc 7857779  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcac 486  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7857780 actttgggggtgtaggaagcaattatgttgggatttatgcac 7857821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 4835591 - 4835512
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  4835591 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccg 4835512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 1209758 - 1209827
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1209758 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 518
Target Start/End: Complemental strand, 39657781 - 39657709
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39657781 ctttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 39657709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 2751207 - 2751284
Alignment:
Q  447 tttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||||    
T  2751207 tttgggggtgtaggaagcaattatgttgggattcatgcacggtgcataaggattttcttatgcaccataaccgctccc 2751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 4841036 - 4840974
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatg 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4841036 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatg 4840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 518
Target Start/End: Original strand, 7059144 - 7059208
Alignment:
Q  454 gtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7059144 gtgtaggaaacaattatgttggaatttatgcacggtgcataatgatttccttatgcaccataacc 7059208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 9852273 - 9852331
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 34648191 - 34648133
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 15260917 - 15260854
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatca 15260854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 23396484 - 23396538
Alignment:
Q  352 gttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  23396484 gttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 35301672 - 35301624
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35301672 gatttatgcacggtgcataaggatttccttatgcaccataaccactccc 35301624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 32987510 - 32987445
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 32987445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  35302649 aaaagttatggtgcataggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 40023325 - 40023279
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaaca 394  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  40023325 aaaagttatggtgcataagccatttccttatacaccgtgcataaaca 40023279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 15259903 - 15259850
Alignment:
Q  471 gttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  15259903 gttgggatttatgcacggtgcataaggatttccttatgccccataaccgctccc 15259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 42433700 - 42433768
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||| ||| |||||||||||||||||    
T  42433700 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 13526733 - 13526669
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  ||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  13526733 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 13616268 - 13616204
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||  ||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  13616268 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 23397441 - 23397493
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  23397441 tgggatttatgcatggtgcataaggatttccttatgcaccataaccattcccg 23397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 39021973 - 39022040
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||| ||||||||    
T  39021973 tgggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaatcatcagat 39022040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 40247347 - 40247288
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatca 408  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  40247347 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 2522867 - 2522924
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||    
T  2522867 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 34647214 - 34647169
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccact 521  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  34647214 gatttatacacggtgcataaggatttccttatgcaccataaccact 34647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 7058112 - 7058175
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatc 407  Q
    ||||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||||    
T  7058112 tgggcaaaagttatggtgcataaggaaatac-ttatgcaccgtgcataaacacttcacaaccatc 7058175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 8550529 - 8550569
Alignment:
Q  371 ttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8550529 ttccttatgcaccgtgcataaacacttcacaaccatcagat 8550569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 9853254 - 9853306
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    |||||||||||||| |||||||| |||||  ||||||||||||||||||||||    
T  9853254 tgggatttatgcacagtgcataaggatttttttatgcaccataaccactcccg 9853306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 1208755 - 1208716
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  1208755 tttatgcacggtgcataaggatttccttatgcaccataac 1208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 17792892 - 17792935
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  17792892 ggatttatgcagggtgcataaggatttccttatgcaccataacc 17792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 32987464 - 32987503
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32987464 tttatgcacggtgcataaggatttccttatgcaccataac 32987503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 35448610 - 35448653
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  35448610 ggatttatgcagggtgcataaggatttccttatgcaccataacc 35448653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 39022021 - 39021982
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  39022021 tttatgcacggtgcataaggatttccttatgcaccataac 39021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 40012248 - 40012186
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatc 407  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||| || | |||||||||    
T  40012248 gggcaaaagttatggtgcataagg-atttccttatgcaccatgcataaagactttacaaccatc 40012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 1208709 - 1208774
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| | |||||||| ||||    
T  1208709 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacactttacaaccataagat 1208774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 1672931 - 1672973
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  1672931 ggatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 10443632 - 10443586
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgcataaacac 395  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||    
T  10443632 aaagttattatgcataagccatttccttatgcaccctgcataaacac 10443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 12355422 - 12355488
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||   ||||||| ||||| |||||||||| ||||||||||| |||||||||| ||||    
T  12355422 ggcaaaagttattacgcataagtcattttcttatgcaccctgcataaacacttcacaaccattagat 12355488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 17232881 - 17232926
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17232881 ttatgcacggtgcataa-gatatccttatgcaccataaccactcccg 17232926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 517
Target Start/End: Complemental strand, 27506750 - 27506708
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  27506750 ggatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 517
Target Start/End: Complemental strand, 42433746 - 42433708
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  42433746 ttatgcacggtgcataaggatttccttatgcaccataac 42433708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 4836738 - 4836701
Alignment:
Q  374 cttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4836738 cttatgcaccgtgcataaacacttcacaaccatcagat 4836701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 4842183 - 4842146
Alignment:
Q  374 cttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4842183 cttatgcaccgtgcataaacacttcacaaccatcagat 4842146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 28698643 - 28698578
Alignment:
Q  349 aaagttatggtgcataagccatttccttatgcaccgtgca-taaacacatcacaaccatcagattt 413  Q
    ||||||||  |||||||||||||| |||||||||| |||| ||||||  |||||||||||||||||    
T  28698643 aaagttattatgcataagccattttcttatgcaccctgcattaaacatttcacaaccatcagattt 28698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 34343453 - 34343494
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  34343453 atttatgcagggtgcataataatttccttatgcaccataacc 34343494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 42434566 - 42434611
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  42434566 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 42434611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 521
Target Start/End: Complemental strand, 40022430 - 40022386
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccact 521  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||    
T  40022430 atttatacacagtgcataaggatttccttatgcaccataaccact 40022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Complemental strand, 185923 - 185880
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataaccac 520  Q
    |||||||||  |||||||| ||||||||||||||||||||||||    
T  185923 atttatgcagagtgcataaggatttccttatgcaccataaccac 185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 7058160 - 7058121
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  7058160 tttatgcacggtgcataagtatttccttatgcaccataac 7058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 7614094 - 7614133
Alignment:
Q  372 tccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  7614094 tccttatgcaccatgcataaacacttcacaaccatcagat 7614133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 15808929 - 15808886
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  15808929 ggatttatgcagggtgcataaggattttcttatgcaccataacc 15808886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 17656662 - 17656619
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||||  |||||||| ||||||||||||||||||||||    
T  17656662 ggatttatgcagagtgcataaggatttccttatgcaccataacc 17656619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 23567530 - 23567487
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||||  |||||||| ||||||||||||||||||||||    
T  23567530 ggatttatgcagagtgcataaggatttccttatgcaccataacc 23567487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 23567643 - 23567686
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  23567643 ggatttatgcagggtgcataagaatttccttatgcaccataacc 23567686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 507
Target Start/End: Original strand, 1672769 - 1672803
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttat 507  Q
    ||||||||||||||||||||||| |||||||||||    
T  1672769 tgggatttatgcacggtgcataaggatttccttat 1672803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 15181790 - 15181856
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||  |||||||    |||||||||||||| ||||||||||| |||||| ||||||||    
T  15181790 ggcaaaagttattatgcataatatgtttccttatgcaccctgcataaacacttcacaagcatcagat 15181856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 18022053 - 18022099
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataa 391  Q
    |||||||||||||||||||||| | || ||||||||||| |||||||    
T  18022053 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 18022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 18757329 - 18757371
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| |||||| |||||||||||||||    
T  18757329 gatttatgcagggtgcataaggatttctttatgcaccataacc 18757371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 30651963 - 30652009
Alignment:
Q  359 tgcataagccatttccttatgcaccgtgcataaacacatcacaacca 405  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||||    
T  30651963 tgcataatctatttccttatgcaccctgcataaacacttcacaacca 30652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 521
Target Start/End: Complemental strand, 40004758 - 40004716
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccact 521  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  40004758 ttatgcacggtgcataaggaaatccttatgcaccataaccact 40004716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 10586063 - 10586104
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| |||||||||||||| |||||||    
T  10586063 atttatgcagggtgcataaggatttccttatgcatcataacc 10586104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 15809842 - 15809883
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||| | ||||||||| ||||||||||||||||||||||    
T  15809842 atttatggagggtgcataaggatttccttatgcaccataacc 15809883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 21120236 - 21120195
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    ||||||||||| ||||||||| |||||| |||||||||||||    
T  21120236 ggatttatgcatggtgcataaggatttcattatgcaccataa 21120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 24473246 - 24473287
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  24473246 atttatacagggtgcataaggatttccttatgcaccataacc 24473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 34343291 - 34343250
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||| | ||||||||| ||||||||||||||||||||||    
T  34343291 atttatgtagggtgcataaagatttccttatgcaccataacc 34343250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 524
Target Start/End: Original strand, 39023000 - 39023048
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||| |||||    
T  39023000 gatttatacacggtgtataagaatttccttatgcaccataaccgctccc 39023048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 131; Significance: 1e-67; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 345 - 495
Target Start/End: Complemental strand, 8487 - 8337
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 444  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 8388  T
Q  445 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataa 495  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  8387 actttgagggtgtagaaagcaattatgttgggatttatgcacggtgcataa 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 425 - 525
Target Start/End: Complemental strand, 639 - 539
Alignment:
Q  425 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  639 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 540  T
Q  525 g 525  Q
    |    
T  539 g 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 345 - 426
Target Start/End: Complemental strand, 742 - 661
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaa 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 6484 - 6555
Alignment:
Q  446 ctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6484 ctttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataac 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 25297 - 25230
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||||    
T  25297 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 25230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 25251 - 25290
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25251 tttatgcacggtgcataaggatttccttatgcaccataac 25290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 202958 - 202913
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  202958 tgggatttgtgcacggtgcataatgatttccttatgcaccataacc 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 525
Target Start/End: Complemental strand, 51949 - 51899
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||| ||||    
T  51949 ggatttatgcagggtgcataaggatttccttatgcaccataatcacacccg 51899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 13613 - 13678
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  13613 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Complemental strand, 13659 - 13620
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  13659 tttatgcacggtggataaggatttccttatgcaccataac 13620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 10739 - 10675
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaat-ccttatacaccgtgcataaacacttcacaaccatcagat 10675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 10694 - 10733
Alignment:
Q  478 tttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  10694 tttatgcacggtgtataaggatttccttatgcaccataac 10733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 28673 - 28725
Alignment:
Q  473 tgggatttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||| |||||||||| || |||||||||||||||||||||| ||||||    
T  28673 tgggatttaagcacggtgcaaaaggatttccttatgcaccataaccgctcccg 28725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 28628 - 28656
Alignment:
Q  448 ttgggggtgtaggaagcaattatgttggg 476  Q
    |||||||||||||||||||||||||||||    
T  28628 ttgggggtgtaggaagcaattatgttggg 28656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 1248 - 1291
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  1248 ggatttatgcagggtgcataaggatttccttatgcaccataacc 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 23588 - 23545
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  23588 ggatttatgcagggtgcataaggatttccttatgcaccataacc 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 23736 - 23776
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataa 516  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  23736 gatttatgcagggtgcataaggatttccttatgcaccataa 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 522
Target Start/End: Complemental strand, 21017 - 20974
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactc 522  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||    
T  21017 ttatgcacggtgcataaggattttcttatgcaccataaccactc 20974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 19045 - 18980
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    ||||||||||||||||||||||  |||| |||||||||| | |||||  | ||||||||||||||||    
T  19045 ggcaaaagttatggtgcataag-gatttgcttatgcaccatacataaggaaatcacaaccatcagat 18980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 11257 - 11188
Alignment:
Q  343 tgggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagattt 413  Q
    ||||||||||||||||||||||||  | | |||||||||| |||||||| ||| |||||||||||| ||||    
T  11257 tgggcaaaagttatggtgcataaggaaat-ccttatgcactgtgcataagcacttcacaaccatcatattt 11188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 517
Target Start/End: Original strand, 11210 - 11248
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  11210 ttatgcacagtgcataaggatttccttatgcaccataac 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 33659 - 33617
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  33659 gatttatgcagggtgcataaggatttccttatgcaccataacc 33617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 2448 - 2508
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatc 407  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||  | ||||||||||||    
T  2448 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 5860 - 5920
Alignment:
Q  346 gcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatc 407  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 5920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 1604 - 1661
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||| ||||  |||||||| |||||||||||||||| ||||||||||| ||||||    
T  1604 ggcaaaaattattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 524
Target Start/End: Complemental strand, 20524 - 20479
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactccc 524  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  20524 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 20479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 20122 - 20163
Alignment:
Q  477 atttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  20122 atttatgcagggtgcataaggatttccttatgcaccataacc 20163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 209326 - 209383
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||||||||  |||||||| ||||| |||||||||| ||||||||||| ||||||    
T  209326 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 209383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 171505 - 171562
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||| ||||  |||||||| |||||||||||||||| || |||||||| ||||||    
T  171505 ggcaaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaa 171562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 7020 - 7082
Alignment:
Q  348 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||| | |  || |||| |||||||||||||||| |||||||||||||||    
T  7020 aaaagttatggtgcataa-cgaaatctttatacaccgtgcataaacacttcacaaccatcagat 7082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 17900 - 17858
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataacc 518  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  17900 ggatttatgca-ggtgcataatgattttcttatgcaccataacc 17858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 130532 - 130466
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||||| |  |||||||||| |||||||    ||||||||||||||||    
T  130532 gggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 130466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 134626 - 134560
Alignment:
Q  344 gggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 411  Q
    |||||||||||||||||||||||||| |  |||||||||| |||||||    ||||||||||||||||    
T  134626 gggcaaaagttatggtgcataagcca-taacttatgcaccatgcataagttaatcacaaccatcagat 134560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 517
Target Start/End: Original strand, 3154 - 3196
Alignment:
Q  475 ggatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||    
T  3154 ggatttatgcagggtgcataaagatttccttatgcacgataac 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 10689 - 10735
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  10689 ttatgcacggtgcataaggaaatccttatgcaccataaccacacccg 10735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 525
Target Start/End: Original strand, 37483 - 37529
Alignment:
Q  479 ttatgcacggtgcataatgatttccttatgcaccataaccactcccg 525  Q
    ||||||||||||||||| ||  ||||||||||||||||||| |||||    
T  37483 ttatgcacggtgcataaggaaatccttatgcaccataaccaatcccg 37529  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 450202 - 450252
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacac 395  Q
    ||||||||||||  |||||||| ||||||||||| |||| |||||||||||    
T  450202 ggcaaaagttattatgcataagtcatttccttatacaccttgcataaacac 450252  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 51359 - 51416
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaa 402  Q
    ||||||| ||||  |||||||| ||||| |||||||||| ||||||||||| ||||||    
T  51359 ggcaaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 51416  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 164058 - 164118
Alignment:
Q  345 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccat 406  Q
    |||||||| |||||||||||||  ||||||||||||||| | ||||| || |||||||||||    
T  164058 ggcaaaagctatggtgcataagg-atttccttatgcaccatacataagcaaatcacaaccat 164118  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 517
Target Start/End: Complemental strand, 96042 - 96001
Alignment:
Q  476 gatttatgcacggtgcataatgatttccttatgcaccataac 517  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  96042 gatttatgcagggtgcataaggattttcttatgcaccataac 96001  T

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