View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10053_low_22 (Length: 240)

Name: NF10053_low_22
Description: NF10053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10053_low_22
NF10053_low_22
[»] chr8 (26 HSPs)
chr8 (66-224)||(33453464-33453622)
chr8 (41-85)||(27411408-27411452)
chr8 (53-89)||(41603084-41603120)
chr8 (41-88)||(6038265-6038312)
chr8 (41-88)||(44293599-44293646)
chr8 (53-86)||(28439985-28440018)
chr8 (53-89)||(2181151-2181187)
chr8 (53-89)||(9192229-9192265)
chr8 (54-89)||(3757960-3757995)
chr8 (41-88)||(7996964-7997011)
chr8 (41-88)||(9478025-9478072)
chr8 (53-88)||(19260581-19260616)
chr8 (42-81)||(29546924-29546963)
chr8 (53-88)||(33373754-33373789)
chr8 (41-88)||(38763505-38763552)
chr8 (53-88)||(39821908-39821943)
chr8 (41-88)||(43778043-43778090)
chr8 (41-87)||(1644663-1644709)
chr8 (42-88)||(27718885-27718931)
chr8 (52-89)||(295896-295933)
chr8 (41-78)||(16027024-16027061)
chr8 (57-86)||(19701350-19701379)
chr8 (44-88)||(32115398-32115443)
chr8 (41-86)||(39138988-39139033)
chr8 (53-89)||(31336809-31336845)
chr8 (53-89)||(33105414-33105450)
[»] chr4 (44 HSPs)
chr4 (42-114)||(22164260-22164329)
chr4 (41-86)||(18903748-18903793)
chr4 (41-88)||(54500593-54500640)
chr4 (42-91)||(32268102-32268151)
chr4 (54-90)||(160731-160767)
chr4 (41-85)||(4911591-4911635)
chr4 (41-88)||(23160064-23160111)
chr4 (42-88)||(47015559-47015605)
chr4 (52-88)||(49952570-49952606)
chr4 (53-122)||(897418-897484)
chr4 (42-89)||(4916178-4916225)
chr4 (41-114)||(8027387-8027457)
chr4 (53-88)||(9783923-9783958)
chr4 (41-88)||(11949753-11949800)
chr4 (41-88)||(14542750-14542797)
chr4 (41-84)||(17729454-17729497)
chr4 (42-89)||(19479468-19479515)
chr4 (41-88)||(21318243-21318290)
chr4 (41-88)||(22411788-22411835)
chr4 (53-88)||(37735813-37735848)
chr4 (53-114)||(37921747-37921805)
chr4 (41-88)||(37930837-37930884)
chr4 (46-89)||(38767029-38767072)
chr4 (53-88)||(39974526-39974561)
chr4 (41-88)||(42845049-42845096)
chr4 (53-88)||(43722789-43722824)
chr4 (41-88)||(46434750-46434797)
chr4 (41-88)||(55061061-55061108)
chr4 (54-114)||(2034098-2034155)
chr4 (54-88)||(8734874-8734908)
chr4 (47-89)||(9615484-9615526)
chr4 (44-86)||(14202472-14202514)
chr4 (42-88)||(22630351-22630397)
chr4 (47-89)||(54859705-54859747)
chr4 (53-86)||(6087773-6087806)
chr4 (51-88)||(17423177-17423214)
chr4 (51-88)||(25783449-25783486)
chr4 (41-85)||(17133770-17133814)
chr4 (41-81)||(25404690-25404730)
chr4 (53-89)||(32923205-32923241)
chr4 (54-86)||(38939537-38939569)
chr4 (42-82)||(39595928-39595968)
chr4 (52-88)||(49953404-49953440)
chr4 (41-89)||(50152386-50152434)
[»] chr1 (39 HSPs)
chr1 (41-86)||(48131218-48131263)
chr1 (41-89)||(24571615-24571663)
chr1 (41-88)||(16033440-16033487)
chr1 (41-87)||(42440138-42440184)
chr1 (41-112)||(40734995-40735063)
chr1 (42-86)||(12852193-12852237)
chr1 (57-89)||(29798122-29798154)
chr1 (41-89)||(46082359-46082407)
chr1 (41-88)||(1091203-1091250)
chr1 (53-88)||(11681247-11681282)
chr1 (41-88)||(16307673-16307720)
chr1 (53-88)||(25165094-25165129)
chr1 (53-122)||(27127217-27127283)
chr1 (41-88)||(32923842-32923889)
chr1 (41-88)||(38862126-38862173)
chr1 (41-88)||(43356459-43356506)
chr1 (41-88)||(52434615-52434662)
chr1 (54-114)||(14880829-14880886)
chr1 (44-86)||(33206799-33206841)
chr1 (51-89)||(33825837-33825875)
chr1 (51-89)||(33878909-33878947)
chr1 (53-86)||(3481587-3481620)
chr1 (53-86)||(10356716-10356749)
chr1 (44-89)||(12268977-12269022)
chr1 (43-88)||(13401621-13401666)
chr1 (52-89)||(23045214-23045251)
chr1 (51-114)||(30937476-30937536)
chr1 (57-86)||(34485903-34485932)
chr1 (53-86)||(49431995-49432028)
chr1 (41-82)||(49773796-49773837)
chr1 (44-88)||(1755093-1755137)
chr1 (44-88)||(3693789-3693833)
chr1 (57-89)||(9398419-9398451)
chr1 (41-89)||(23979406-23979454)
chr1 (41-89)||(28832161-28832209)
chr1 (53-89)||(32497483-32497519)
chr1 (57-89)||(34083360-34083392)
chr1 (53-89)||(44119474-44119510)
chr1 (41-89)||(45701351-45701399)
[»] chr3 (35 HSPs)
chr3 (41-89)||(28430555-28430603)
chr3 (53-114)||(21245794-21245852)
chr3 (41-88)||(7464481-7464528)
chr3 (41-88)||(8238588-8238635)
chr3 (41-86)||(31214660-31214705)
chr3 (52-88)||(49975806-49975842)
chr3 (41-88)||(2153491-2153538)
chr3 (53-88)||(2186429-2186464)
chr3 (53-88)||(25441502-25441537)
chr3 (66-109)||(32935953-32935996)
chr3 (41-88)||(33633308-33633355)
chr3 (41-88)||(37887921-37887968)
chr3 (41-88)||(45431972-45432019)
chr3 (42-88)||(34899121-34899167)
chr3 (42-88)||(35392027-35392073)
chr3 (53-86)||(21160078-21160111)
chr3 (44-89)||(24348410-24348455)
chr3 (53-86)||(31463510-31463543)
chr3 (53-86)||(35347297-35347330)
chr3 (53-86)||(35557119-35557152)
chr3 (63-114)||(41087572-41087620)
chr3 (51-88)||(46903932-46903969)
chr3 (41-86)||(52456507-52456552)
chr3 (44-88)||(1111834-1111878)
chr3 (52-88)||(2078264-2078300)
chr3 (41-89)||(4668707-4668755)
chr3 (41-89)||(17755144-17755192)
chr3 (41-89)||(19056464-19056512)
chr3 (57-89)||(19939047-19939079)
chr3 (53-89)||(20612279-20612315)
chr3 (53-89)||(28965779-28965815)
chr3 (41-89)||(32928578-32928626)
chr3 (41-81)||(33930370-33930410)
chr3 (57-115)||(54230105-54230160)
chr3 (53-89)||(55395326-55395362)
[»] chr2 (32 HSPs)
chr2 (41-88)||(23407008-23407055)
chr2 (43-88)||(3904226-3904271)
chr2 (41-88)||(4557761-4557808)
chr2 (41-88)||(17452655-17452702)
chr2 (57-89)||(25274835-25274867)
chr2 (41-89)||(29896284-29896332)
chr2 (41-88)||(4238783-4238830)
chr2 (53-88)||(5028880-5028915)
chr2 (41-88)||(9547399-9547446)
chr2 (41-88)||(11175809-11175856)
chr2 (41-88)||(15770814-15770860)
chr2 (41-88)||(24579658-24579705)
chr2 (53-88)||(24592848-24592883)
chr2 (41-88)||(25625740-25625787)
chr2 (41-88)||(26999134-26999181)
chr2 (41-88)||(27412826-27412873)
chr2 (41-88)||(31815877-31815924)
chr2 (41-114)||(41939098-41939168)
chr2 (41-84)||(42451461-42451504)
chr2 (53-114)||(43117192-43117250)
chr2 (57-117)||(18782546-18782603)
chr2 (44-89)||(33890169-33890214)
chr2 (52-115)||(35685062-35685122)
chr2 (44-89)||(37096920-37096965)
chr2 (57-89)||(6579287-6579319)
chr2 (52-88)||(9391765-9391801)
chr2 (41-89)||(13143131-13143179)
chr2 (41-89)||(23250310-23250358)
chr2 (44-88)||(25603904-25603948)
chr2 (53-89)||(32957545-32957581)
chr2 (54-86)||(35458789-35458821)
chr2 (41-89)||(39688279-39688327)
[»] chr5 (33 HSPs)
chr5 (42-88)||(39963517-39963563)
chr5 (41-89)||(13796353-13796401)
chr5 (41-81)||(18999980-19000020)
chr5 (41-122)||(37054259-37054337)
chr5 (58-114)||(26590708-26590761)
chr5 (41-86)||(1809070-1809115)
chr5 (41-86)||(36170081-36170126)
chr5 (41-89)||(16579364-16579412)
chr5 (53-88)||(4763188-4763223)
chr5 (53-88)||(6489031-6489066)
chr5 (41-88)||(15889435-15889482)
chr5 (43-86)||(16094083-16094126)
chr5 (41-88)||(20688064-20688111)
chr5 (49-88)||(23118049-23118088)
chr5 (42-89)||(27903136-27903183)
chr5 (53-88)||(33014246-33014281)
chr5 (58-89)||(36162896-36162927)
chr5 (54-88)||(19647511-19647545)
chr5 (54-88)||(32559328-32559362)
chr5 (42-88)||(33928663-33928709)
chr5 (53-86)||(5614791-5614824)
chr5 (57-86)||(7215776-7215805)
chr5 (41-86)||(14951645-14951690)
chr5 (53-86)||(17083595-17083628)
chr5 (44-85)||(24408522-24408563)
chr5 (51-88)||(25607058-25607095)
chr5 (54-86)||(3052207-3052239)
chr5 (41-89)||(13864367-13864415)
chr5 (41-89)||(15775883-15775931)
chr5 (41-81)||(16575312-16575352)
chr5 (45-89)||(30488948-30488992)
chr5 (57-89)||(31708152-31708184)
chr5 (53-89)||(42473917-42473953)
[»] chr6 (25 HSPs)
chr6 (41-86)||(9977083-9977128)
chr6 (53-89)||(8138460-8138496)
chr6 (52-114)||(22414449-22414508)
chr6 (41-89)||(17113450-17113498)
chr6 (44-88)||(20744162-20744206)
chr6 (41-89)||(34701170-34701218)
chr6 (41-88)||(4455586-4455633)
chr6 (53-88)||(15155759-15155794)
chr6 (41-88)||(15169955-15170002)
chr6 (41-88)||(15178727-15178774)
chr6 (53-88)||(16390453-16390488)
chr6 (41-88)||(24623307-24623354)
chr6 (41-88)||(27834363-27834410)
chr6 (57-88)||(28592693-28592724)
chr6 (41-88)||(29283839-29283886)
chr6 (42-88)||(9973242-9973288)
chr6 (41-86)||(10018425-10018470)
chr6 (41-86)||(21029356-21029401)
chr6 (44-88)||(5937656-5937700)
chr6 (41-81)||(9665341-9665381)
chr6 (57-89)||(12808892-12808924)
chr6 (44-88)||(14918293-14918337)
chr6 (48-88)||(19265521-19265561)
chr6 (52-88)||(24212540-24212576)
chr6 (41-85)||(32621399-32621443)
[»] scaffold0350 (1 HSPs)
scaffold0350 (41-88)||(1272-1319)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-88)||(99061-99108)
[»] chr7 (43 HSPs)
chr7 (41-88)||(27833391-27833438)
chr7 (41-82)||(7994874-7994915)
chr7 (41-86)||(26717918-26717963)
chr7 (41-82)||(45046205-45046246)
chr7 (41-89)||(3671847-3671895)
chr7 (41-89)||(30753749-30753797)
chr7 (44-88)||(34448603-34448647)
chr7 (49-89)||(39280816-39280856)
chr7 (53-89)||(43539106-43539142)
chr7 (57-114)||(1046557-1046611)
chr7 (53-88)||(5041363-5041398)
chr7 (41-84)||(5579721-5579764)
chr7 (51-86)||(10421997-10422032)
chr7 (41-88)||(18023703-18023750)
chr7 (41-88)||(18773746-18773793)
chr7 (41-88)||(34773255-34773302)
chr7 (53-88)||(40187638-40187673)
chr7 (41-88)||(42227795-42227842)
chr7 (50-88)||(11908977-11909015)
chr7 (54-88)||(35666327-35666361)
chr7 (44-89)||(3536247-3536292)
chr7 (52-89)||(5435562-5435599)
chr7 (43-88)||(19599169-19599214)
chr7 (41-86)||(21164748-21164793)
chr7 (41-89)||(21327531-21327580)
chr7 (41-86)||(21751616-21751661)
chr7 (43-88)||(44868147-44868192)
chr7 (53-86)||(45151403-45151436)
chr7 (41-86)||(46371007-46371052)
chr7 (41-89)||(1285059-1285107)
chr7 (53-89)||(5458073-5458109)
chr7 (53-89)||(7670457-7670493)
chr7 (41-89)||(9139476-9139524)
chr7 (53-123)||(16537538-16537605)
chr7 (53-123)||(16628057-16628124)
chr7 (41-89)||(16971019-16971067)
chr7 (53-89)||(25251533-25251569)
chr7 (53-89)||(31281767-31281803)
chr7 (41-89)||(31292759-31292807)
chr7 (54-86)||(37230031-37230063)
chr7 (57-89)||(38553841-38553873)
chr7 (41-89)||(45088899-45088946)
chr7 (44-88)||(47342427-47342471)
[»] scaffold0050 (1 HSPs)
scaffold0050 (41-88)||(53370-53417)
[»] scaffold0044 (1 HSPs)
scaffold0044 (54-88)||(42337-42371)
[»] scaffold0111 (1 HSPs)
scaffold0111 (41-86)||(39410-39455)
[»] scaffold0008 (1 HSPs)
scaffold0008 (56-89)||(122914-122947)
[»] scaffold1127 (1 HSPs)
scaffold1127 (53-89)||(1167-1203)
[»] scaffold0122 (1 HSPs)
scaffold0122 (41-89)||(14176-14224)
[»] scaffold0012 (1 HSPs)
scaffold0012 (53-89)||(118842-118878)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 33453622 - 33453464
Alignment:
Q  66 accttacatatattatgcattgttatccttactaactaagctaaactcatgacgactgaaataatatgttatcaaactccctcatgcttgtaaatctagg 165  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33453622 accttacatatattatgtattattatccttactaactaagttaaactcatgacgactgaaataatatgttatcaaactccctcatgcttgtaaatctagg 33453523  T
Q  166 aaagaccgtaacggaaaaacttgaatgaggttgtaccatctcaaaacaatcacactttt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33453522 aaagaccgtaacggaaaaacttgaatgaggttgtaccatctcaaaacaatcacactttt 33453464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 27411408 - 27411452
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcat 85  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  27411408 gtggtggccagagtttggaccccagaccttacatatattatgcat 27411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 41603120 - 41603084
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||||||||||||||||||||||||||    
T  41603120 gtttgaaccccagaccttacatatattatgcattgtt 41603084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 6038265 - 6038312
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||    
T  6038265 gtggtggccggagtttgaactccagaccttacatatattatgcattgt 6038312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 44293646 - 44293599
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  44293646 gtggtggtcagggttcgaaccccagatcttacatatattatgcattgt 44293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 28440018 - 28439985
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||||||||||||||||    
T  28440018 gtttgaaccccagaccttacatatattatgcatt 28439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 2181187 - 2181151
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||| ||||||||||||||||||||||||||||||||    
T  2181187 gtttaaaccccagaccttacatatattatgcattgtt 2181151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 9192229 - 9192265
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9192229 gtttgaaccccagactttacatatattatgcattgtt 9192265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 3757960 - 3757995
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3757960 tttgaaccccagatcttacatatattatgcattgtt 3757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 7997011 - 7996964
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||    
T  7997011 gtggtggtcggggtttgaaccccagaccttgcatatattatgcgttgt 7996964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 9478025 - 9478072
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| |||||| ||||||||||| |||| ||||||||||||    
T  9478025 gtggtggtcagggtttgatccccagaccttgcatacattatgcattgt 9478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 19260581 - 19260616
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19260581 gtttgaaccccggaccttacatatattatgcattgt 19260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 29546963 - 29546924
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  29546963 tggtggtcagggtttgaaccccagaccttgcatatattat 29546924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 33373754 - 33373789
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||||||||||||||| |||||    
T  33373754 gtttgaaccccagaccttacatatattatgaattgt 33373789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 38763505 - 38763552
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  38763505 gtggtggccagggttcgaaccccagaccttgcatatattatgcattgt 38763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 39821943 - 39821908
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  39821943 gtttgaaccccagaccttgcatatattatgcattgt 39821908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 43778090 - 43778043
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||||    
T  43778090 gtggtggtcggagtttgaacctcagaccttgcatattttatgcattgt 43778043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 1644663 - 1644709
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattg 87  Q
    |||||||||||  |||||| |||||||||||||||| ||||||||||    
T  1644663 gtggtggtcaggatttgaatcccagaccttacatattttatgcattg 1644709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27718885 - 27718931
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| |||||||||| || |||||| |||||||||||||||||    
T  27718885 tggtggtcggagtttgaactccggaccttgcatatattatgcattgt 27718931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 295933 - 295896
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  295933 agtttgaaccccagaccttgcatgtattatgcattgtt 295896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 16027024 - 16027061
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatat 78  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  16027024 gtggtggtcagagtttgaatctcagaccttacatatat 16027061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 19701350 - 19701379
Alignment:
Q  57 gaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||||||||||||    
T  19701350 gaaccccagaccttacatatattatgcatt 19701379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 32115398 - 32115443
Alignment:
Q  44 gtggtcagag-tttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||    
T  32115398 gtggtcagaggtttgaaccccgaaccttacatatattatgcattgt 32115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 39138988 - 39139033
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| |||||||||||||  ||||||||||| |||||||||    
T  39138988 gtggtggtcggagtttgaaccccgaaccttacatattttatgcatt 39139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 31336809 - 31336845
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  31336809 gtttgaaccctagaccttgcatatattatgcattgtt 31336845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 33105450 - 33105414
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  33105450 gtttgaaccccggaccttgcatatattatgcattgtt 33105414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 22164260 - 22164329
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||   | ||| ||||||||||||||||    
T  22164260 tggtggtcggggtttgaaccccagaccttacatatattatgcattgtt---cctaccaactaagctaaactca 22164329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 18903748 - 18903793
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  18903748 gtggtggtcagggtttgaaccccagaccttacatatattatgcatt 18903793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 54500640 - 54500593
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  54500640 gtggtggtcagtgtttgaaccccggaccttacatatattatgcattgt 54500593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 32268151 - 32268102
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgttat 91  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  32268151 tggtggtcggagtttgaaccccaaacctttcatatattatgcattgttat 32268102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 160767 - 160731
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgtta 90  Q
    |||||||||||||||||||||||||||||||||||||    
T  160767 tttgaaccccagaccttacatatattatgcattgtta 160731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 4911591 - 4911635
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcat 85  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  4911591 gtggtgttcagagtttgaacctcagaccttacatatattatgcat 4911635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 23160111 - 23160064
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  23160111 gtggtgttcagagtttgaacctcggaccttacatatattatgcattgt 23160064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 47015559 - 47015605
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  47015559 tggtggtcggagtttgaaccccagaccttgtatatattatgcattgt 47015605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 49952570 - 49952606
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49952570 agtttgaaccccggaccttacatatattatgcattgt 49952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 897484 - 897418
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatgacgact 122  Q
    ||||||||||| ||||||||||||||||| |||||   ||| ||| |||| |||||||||||||| ||||    
T  897484 gtttgaaccccggaccttacatatattatacattg---tccataccaactgagctaaactcatgaagact 897418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 4916225 - 4916178
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  4916225 tggtggccagggtttgaaccccaaatcttacatatattatgcattgtt 4916178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 8027387 - 8027457
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||||| | ||||||||||| || ||| |||||||||||||   |||||||||| |||| |||||||||||    
T  8027387 gtggtggtcggggtttgaacccccgatcttgcatatattatgca---ttatccttaccaactgagctaaactca 8027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 9783958 - 9783923
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9783958 gtttgaacctcagaccttacatatattatgcattgt 9783923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 11949753 - 11949800
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  11949753 gtggtggtcggggtttgaaccccggaccttgcatatattatgcattgt 11949800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 14542750 - 14542797
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  14542750 gtggtgttcagggttcgaaccccagaccttgcatatattatgcattgt 14542797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 17729497 - 17729454
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgca 84  Q
    ||||||||| | |||||||||||||||||| |||||||||||||    
T  17729497 gtggtggtcggggtttgaaccccagaccttgcatatattatgca 17729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 19479468 - 19479515
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||| | ||||||||||| |||||| ||||||||||||||||||    
T  19479468 tggtggtcggggtttgaaccccggaccttgcatatattatgcattgtt 19479515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 21318243 - 21318290
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||| ||||||| |||||||||||||||||    
T  21318243 gtggtggtcggggtttgaaccctagaccttgcatatattatgcattgt 21318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 22411835 - 22411788
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||  ||||||||||||||  |||||||||||||||||||||||    
T  22411835 gtggtggctagagtttgaaccccgaaccttacatatattatgcattgt 22411788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 37735848 - 37735813
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||||||||||||||||||    
T  37735848 gtttgaacctcagaccttacatatattatgcattgt 37735813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 37921805 - 37921747
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||| ||| |||||| ||||||||||||||||   |||||||||||| |||||||||||    
T  37921805 gtttgaatcccggaccttgcatatattatgcattg---tccttactaactgagctaaactca 37921747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 37930837 - 37930884
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||| |||||||| |||||||||||||||||    
T  37930837 gtggtggtcggggtttgaacctcagaccttgcatatattatgcattgt 37930884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 38767029 - 38767072
Alignment:
Q  46 ggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||    
T  38767029 ggtcggagtttgaaccccaaaccttacatatgttatgcattgtt 38767072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 39974561 - 39974526
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  39974561 gtttgaaccccagaccttccatatattatgcattgt 39974526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 42845096 - 42845049
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| |||||| |||||| |||||| |||||||||||||||||    
T  42845096 gtggtggtcggagttttaaccccggaccttgcatatattatgcattgt 42845049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 43722824 - 43722789
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43722824 gtttgaaccccggaccttacatatattatgcattgt 43722789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 46434750 - 46434797
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| || ||||||||||| || |||||||||||||||||||||||    
T  46434750 gtggtgatcggagtttgaacctcaaaccttacatatattatgcattgt 46434797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 55061108 - 55061061
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| || |||||||||| |||||| |||||||||||||||||    
T  55061108 gtggtggtcggaatttgaacccccgaccttgcatatattatgcattgt 55061061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 2034098 - 2034155
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    |||||||||||||||||| ||||||||||||   |||||| ||| |||| |||||||||||    
T  2034098 tttgaaccccagaccttaaatatattatgca---ttatccataccaactgagctaaactca 2034155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 8734908 - 8734874
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| ||||||||||||||||||||||||||    
T  8734908 tttgaacctcagaccttacatatattatgcattgt 8734874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 9615484 - 9615526
Alignment:
Q  47 gtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  9615484 gtcagagtttgaactccggatcttacatatattatgcattgtt 9615526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 14202472 - 14202514
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||| | ||||||||||| ||||||||||||||||||||||    
T  14202472 gtggtcggggtttgaaccccggaccttacatatattatgcatt 14202514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 22630351 - 22630397
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| | ||||||||| |||||||| |||||||||||||||||    
T  22630351 tggtggtcggggtttgaacctcagaccttgcatatattatgcattgt 22630397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 54859705 - 54859747
Alignment:
Q  47 gtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||    
T  54859705 gtcagggtttgaacccaagaccttgcatatattatgcattgtt 54859747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 6087806 - 6087773
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||| |||||||||||||||    
T  6087806 gtttgaaccccagaccttgcatatattatgcatt 6087773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 17423177 - 17423214
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  17423177 gagtttgaaccccggaccttgcatatattatgcattgt 17423214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 25783449 - 25783486
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  25783449 gagtttgaaccccggaccttgcatatattatgcattgt 25783486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 17133770 - 17133814
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcat 85  Q
    ||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  17133770 gtggtggccagggtttaaaccccagacctttcatatattatgcat 17133814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 25404730 - 25404690
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  25404730 gtggtggtcagggttcgaacccccgaccttacatatattat 25404690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 32923205 - 32923241
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||  ||||||||||||||||||||||||    
T  32923205 gtttgaaccccgaaccttacatatattatgcattgtt 32923241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 38939537 - 38939569
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||| ||||||||||||||    
T  38939537 tttgaaccccagaccttatatatattatgcatt 38939569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 39595928 - 39595968
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatg 82  Q
    |||||||| ||||||||||| |||||||| |||||||||||    
T  39595928 tggtggtcggagtttgaacctcagaccttgcatatattatg 39595968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 49953404 - 49953440
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||| |||||| |||||||||||||||||    
T  49953404 agtttgaaccccggaccttgcatatattatgcattgt 49953440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 50152434 - 50152386
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||||||||  |||||||||| ||||||||||||    
T  50152434 gtggtggtcggggtttgaaccccatcccttacatattttatgcattgtt 50152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 48131218 - 48131263
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  48131218 gtggtggtcagagtttgaactccagaccttacatatattatgcatt 48131263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 24571615 - 24571663
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  24571615 gtggtggtcggagtttgaaccccagaccttgcatatattatgtattgtt 24571663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 16033440 - 16033487
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||    
T  16033440 gtggtggccggagtttgaaccccagaccttgcatatattatgcattgt 16033487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 42440138 - 42440184
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattg 87  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||    
T  42440138 gtggtggttagggtttgaactccagaccttacatatattatgcattg 42440184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 40734995 - 40735063
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaact 112  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||   ||| |||||||| |||||||||    
T  40734995 gtggtggtcagggtttgaaccccgaaccttacatattttatgcattg---tccatactaactgagctaaact 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 12852193 - 12852237
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||| || ||||||||||||| |||||||||||||||||||    
T  12852193 tggtggtcggattttgaaccccagatcttacatatattatgcatt 12852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 29798122 - 29798154
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||||||||||||||||||||||    
T  29798122 gaaccccagaccttacatatattatgcattgtt 29798154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 46082407 - 46082359
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||||  ||| ||||||||||||||||||||||||    
T  46082407 gtggtggtcagtgtttgaattccaaaccttacatatattatgcattgtt 46082359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 1091250 - 1091203
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  1091250 gtggtggtcagagtttgaaccccgaaccttgcatacattatgcattgt 1091203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 11681282 - 11681247
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  11681282 gtttgaaccccagaccttgcatatattatgcattgt 11681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 16307720 - 16307673
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  16307720 gtggtggtcggggtttgatccccagaccttgcatatattatgcattgt 16307673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 25165094 - 25165129
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||| |||||||||||||||||||||||||    
T  25165094 gtttgaacccgagaccttacatatattatgcattgt 25165129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 27127283 - 27127217
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatgacgact 122  Q
    |||||||| |||||||||  ||||||||||||||   ||||||||||||| |||||| ||||||| ||||    
T  27127283 gtttgaacgccagaccttgtatatattatgcatt---atccttactaactgagctaagctcatgaggact 27127217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 32923889 - 32923842
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||||||    
T  32923889 gtggtggtcggagtttgaacttcagacctttcatatattatgcattgt 32923842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 38862173 - 38862126
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  38862173 gtggtagtcagagttcgaaccccagaccttgcatattttatgcattgt 38862126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 43356506 - 43356459
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||| ||| |||||||||||||||||||||||    
T  43356506 gtggtggtcggggtttgaactccaaaccttacatatattatgcattgt 43356459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 52434662 - 52434615
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||| ||||||||||||||||| ||||| |||| ||||||    
T  52434662 gtggtggtcagaatttgaaccccagaccttgcatattttatacattgt 52434615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 14880886 - 14880829
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    |||||||| |||||||| ||||||||||||||||   ||| ||||||||||||||| ||||    
T  14880886 tttgaacctcagaccttgcatatattatgcattg---tccctactaactaagctaagctca 14880829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 33206799 - 33206841
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  33206799 gtggtcggagtttgaaccccagaccttggatatattatgcatt 33206841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 33825875 - 33825837
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  33825875 gagtttaaaccccagaccttacatatattatgtattgtt 33825837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 33878947 - 33878909
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  33878947 gagtttaaaccccagaccttacatatattatgtattgtt 33878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 3481620 - 3481587
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||| |||||||||||||||    
T  3481620 gtttgaaccccagaccttgcatatattatgcatt 3481587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 10356716 - 10356749
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||| |||||||||||||||    
T  10356716 gtttgaaccccagaccttgcatatattatgcatt 10356749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 12268977 - 12269022
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| | ||||||||||| |||||| ||||||||||||||||||    
T  12268977 gtggtcggggtttgaaccccggaccttgcatatattatgcattgtt 12269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 13401666 - 13401621
Alignment:
Q  43 ggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||||  |||||||||||||||||||||||    
T  13401666 ggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 13401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 23045251 - 23045214
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| || |||||||||||||||||||||||||    
T  23045251 agtttgaactccggaccttacatatattatgcattgtt 23045214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 30937536 - 30937476
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||| |||||||||||||| |||||||||| |||||   ||||||  ||||||||||||||||    
T  30937536 gagttcgaaccccagaccttgcatatattatacattg---tccttatcaactaagctaaactca 30937476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 34485932 - 34485903
Alignment:
Q  57 gaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||||||||||||    
T  34485932 gaaccccagaccttacatatattatgcatt 34485903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 49431995 - 49432028
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| ||||||||||||||||||||||    
T  49431995 gtttgaaccccggaccttacatatattatgcatt 49432028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 49773796 - 49773837
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatg 82  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  49773796 gtggtggtcagagttcgaactccagaccttaaatatattatg 49773837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 1755137 - 1755093
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| |||||||||| ||||||| |||||||||||| ||||    
T  1755137 gtggtcagggtttgaacccgagaccttgcatatattatgcgttgt 1755093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 3693789 - 3693833
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| | ||||||||| ||||||||||||||||||||| ||||    
T  3693789 gtggtcggggtttgaacctcagaccttacatatattatgctttgt 3693833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 9398419 - 9398451
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||||||||||| ||||||||||    
T  9398419 gaaccccagaccttacatatatcatgcattgtt 9398451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 23979406 - 23979454
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | |||||||||||| ||| ||||||||||||| ||||||    
T  23979406 gtggtggtcggggtttgaaccccaaaccatacatatattatgtattgtt 23979454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 28832161 - 28832209
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| |  |||||||| |||||||| ||||||||||||||||||    
T  28832161 gtggtggtcgggatttgaacctcagaccttgcatatattatgcattgtt 28832209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 32497483 - 32497519
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  32497483 gtttgaaccctagaccttgcatatattatgcattgtt 32497519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 34083392 - 34083360
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||| ||||||||||||||||||||||||    
T  34083392 gaaccccaaaccttacatatattatgcattgtt 34083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 44119474 - 44119510
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  44119474 gtttgaaccccagaacttacatatattatgtattgtt 44119510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 45701399 - 45701351
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| || || |||| ||||||||||||||| ||||||||||||    
T  45701399 gtggtggtcggaattcgaactccagaccttacatattttatgcattgtt 45701351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 28430555 - 28430603
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  28430555 gtggtggtcagagtttgaacctcagaccttgcatatattatgcattgtt 28430603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 21245852 - 21245794
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||| ||||    
T  21245852 gtttgaaccccagaccttacatatattatgcattg---tccttaccaactaagctaagctca 21245794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 7464481 - 7464528
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  7464481 gtggtggtcggggtttgaaccccggaccttacatatattatgcattgt 7464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 8238635 - 8238588
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||    
T  8238635 gtggtggccggagtttgaaccccagaccttgcatatattatgcattgt 8238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 31214705 - 31214660
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  31214705 gtggtggtcggagtttgaatcccggaccttacatatattatgcatt 31214660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 49975806 - 49975842
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||||||| |||||||||||||||||    
T  49975806 agtttgaaccccagaccttgcatatattatgcattgt 49975842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 2153491 - 2153538
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| ||| |||| ||||||||||||| |||||||||||||||||    
T  2153491 gtggtggccagggtttaaaccccagaccttgcatatattatgcattgt 2153538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 2186429 - 2186464
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||||||||||||||| |||||    
T  2186429 gtttgaaccccagaccttacatatattatgtattgt 2186464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 25441502 - 25441537
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  25441502 gtttgaaccccagaccttgcatatattatgcattgt 25441537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 32935953 - 32935996
Alignment:
Q  66 accttacatatattatgcattgttatccttactaactaagctaa 109  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  32935953 accttacatatattatgcattattatctttacaaactaagctaa 32935996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 33633308 - 33633355
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||| |||| || || |||||||||||||||||||||    
T  33633308 gtggtggtcagagttcgaactccggatcttacatatattatgcattgt 33633355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 37887921 - 37887968
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||| ||| |||| |||||||||||||||||||||||    
T  37887921 gtggtggtcagtgttcgaatcccaaaccttacatatattatgcattgt 37887968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 45432019 - 45431972
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| ||| ||||||||||| |||||| |||||||||||||||||    
T  45432019 gtggtggccagggtttgaaccccggaccttgcatatattatgcattgt 45431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 34899167 - 34899121
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| | ||||||||||| |||||| |||||||||||||||||    
T  34899167 tggtggtcggggtttgaaccccggaccttgcatatattatgcattgt 34899121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 35392073 - 35392027
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| || ||||||||||| ||||||||||||||||| |||||    
T  35392073 tggtggtctgactttgaaccccaaaccttacatatattatgtattgt 35392027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 21160111 - 21160078
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| ||||||||||||||||||||||    
T  21160111 gtttgaacccccgaccttacatatattatgcatt 21160078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 24348455 - 24348410
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| ||||||||||| | |||||| ||||||||||||||||||    
T  24348455 gtggtcggagtttgaacctctgaccttgcatatattatgcattgtt 24348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 31463543 - 31463510
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| ||||||||||||||||||||||||    
T  31463543 gtttgaacctcagaccttacatatattatgcatt 31463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 35347297 - 35347330
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||| |||||||||||||||    
T  35347297 gtttgaaccccagaccttgcatatattatgcatt 35347330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 35557152 - 35557119
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||||||||||| |||||||||    
T  35557152 gtttgaaccccagaccttacatattttatgcatt 35557119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 41087620 - 41087572
Alignment:
Q  63 cagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||| |||||||||||||||||||   ||||||| ||||||||||||||||    
T  41087620 cagactttacatatattatgcattg---tccttaccaactaagctaaactca 41087572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 46903969 - 46903932
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  46903969 gagtttgaaccctggaccttacatatattatgcattgt 46903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 52456552 - 52456507
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||||||    
T  52456552 gtggtggtcagggttcgaaccccggaccttacatattttatgcatt 52456507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 1111834 - 1111878
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||    
T  1111834 gtggtcggggtttgaaccccagaccttgcatatattatgtattgt 1111878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 2078300 - 2078264
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2078300 agtttgaaccccaaaccttgcatatattatgcattgt 2078264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 4668755 - 4668707
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||| ||||| |||||||| ||| || |||||||||||||||||||||    
T  4668755 gtggtcgtcagggtttgaactccaaactttacatatattatgcattgtt 4668707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 17755192 - 17755144
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| || ||||||||||  ||||||||||||||||| ||||||    
T  17755192 gtggtggtcggaatttgaaccccgaaccttacatatattatgtattgtt 17755144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 19056512 - 19056464
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| || ||||||||||  ||||||||||||||||| ||||||    
T  19056512 gtggtggtcggaatttgaaccccgaaccttacatatattatgtattgtt 19056464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 19939047 - 19939079
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| ||||||||||||||||||    
T  19939047 gaaccccagacctttcatatattatgcattgtt 19939079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 20612279 - 20612315
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  20612279 gtttgaaccccaaaccttgcatatattatgcattgtt 20612315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 28965779 - 28965815
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||  ||||||||||||||||||||||||    
T  28965779 gtttgaaccccgaaccttacatatattatgcattgtt 28965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 32928578 - 32928626
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | |||||||| ||||| |||| |||||||||||||||||    
T  32928578 gtggtggtcggggtttgaactccagatcttatatatattatgcattgtt 32928626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 33930410 - 33930370
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    |||||||||||||||| |||||| |||||| ||||||||||    
T  33930410 gtggtggtcagagtttaaaccccggaccttgcatatattat 33930370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 54230105 - 54230160
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcat 115  Q
    |||||||| ||||| ||||||||||||||||   ||||||| |||| ||||||||||||    
T  54230105 gaaccccaaaccttgcatatattatgcattg---tccttaccaactgagctaaactcat 54230160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 55395326 - 55395362
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  55395326 gtttgaaccccaaaccttacatatattatgtattgtt 55395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 23407008 - 23407055
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23407008 gtggtggtcagggtttgaaccccagaccttgcatatattatgcattgt 23407055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 3904271 - 3904226
Alignment:
Q  43 ggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||    
T  3904271 ggtgatcagggtttgaaccccagaccttacatatattatgcattgt 3904226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 4557761 - 4557808
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  4557761 gtggtggtcagggtttgaaccacggaccttacatatattatgcattgt 4557808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 17452702 - 17452655
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  17452702 gtggtggccagggtttgaaccccagaccttacatatattattcattgt 17452655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 25274835 - 25274867
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||||||||||||||||||||||    
T  25274835 gaaccccagaccttacatatattatgcattgtt 25274867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 29896284 - 29896332
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||||||||    
T  29896284 gtggtggtcggggtttgaaccccaaaccttgcatatattatgcattgtt 29896332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 4238830 - 4238783
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  4238830 gtggtggtcggagttcgaaccccgaaccttacatatattatgcattgt 4238783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 5028915 - 5028880
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||| |||||||||||||||||||||||    
T  5028915 gtttgaaccccaaaccttacatatattatgcattgt 5028880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 9547399 - 9547446
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||| ||||| |||||||||||||||||    
T  9547399 gtggtggtcggggtttgaaccccaaaccttgcatatattatgcattgt 9547446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 11175856 - 11175809
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||||||||| ||| |||||||||||||||||    
T  11175856 gtggtggccggagtttgaaccccagatcttgcatatattatgcattgt 11175809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 15770860 - 15770814
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||    
T  15770860 gtggtggtcagagtttgaacgc-agacgttacatatattatgcattgt 15770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 24579658 - 24579705
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  24579658 gtggtggccagagtttgaaccctggaccttgcatatattatgcattgt 24579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 24592848 - 24592883
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  24592848 gtttgaaccccagaccttgcatatattatgcattgt 24592883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 25625787 - 25625740
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| |||||||||||||||||| |||||    
T  25625787 gtggtggtccgggtttgaaccccggaccttacatatattatgaattgt 25625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 26999181 - 26999134
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | ||||||||||| |||||||| |||||||||||||||||    
T  26999181 gtggtggccggagtttgaaccgcagaccttgcatatattatgcattgt 26999134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27412826 - 27412873
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||  ||||||||||||||||||||||||||    
T  27412826 gtggtggtcggggtttgaacaacagaccttacatatattatgcattgt 27412873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 31815877 - 31815924
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  31815877 gtggtggtcggggtttgaaccccggaccttgcatatattatgcattgt 31815924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 41939098 - 41939168
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||||| ||||||||| | || |||||||||||||||||||   |||||| ||| ||||||||||| ||||    
T  41939098 gtggtggtcggagtttgaatctcaaaccttacatatattatgca---ttatccctaccaactaagctaagctca 41939168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 42451504 - 42451461
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgca 84  Q
    ||||||||| ||||||||||| || |||||||||||||||||||    
T  42451504 gtggtggtcggagtttgaacctcaaaccttacatatattatgca 42451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 43117192 - 43117250
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||||| |||||||| ||||||||||||||||   ||||||| |||| |||||||||||    
T  43117192 gtttgaacctcagaccttgcatatattatgcattg---tccttaccaactgagctaaactca 43117250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 18782546 - 18782603
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatga 117  Q
    |||||||||||||| |||||||||||||||||| ||  ||| |||| ||||||||||||||    
T  18782546 gaaccccagaccttgcatatattatgcattgtt-tc--taccaacttagctaaactcatga 18782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 33890169 - 33890214
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| |||||||||| || ||||||||||||||||||| |||||    
T  33890169 gtggtcggagtttgaacgccggaccttacatatattatgcgttgtt 33890214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 35685062 - 35685122
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcat 115  Q
    |||| |||||| ||||||| ||||||||||||||||   ||||||| |||| ||||||||||||    
T  35685062 agttcgaaccctagaccttgcatatattatgcattg---tccttaccaactgagctaaactcat 35685122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 37096920 - 37096965
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||| |||||||||||||| | ||||||||||||||||| ||||||    
T  37096920 gtggacagagtttgaaccctataccttacatatattatgtattgtt 37096965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 6579287 - 6579319
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| ||||||||||||||||||    
T  6579287 gaaccccagaccttgcatatattatgcattgtt 6579319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 9391765 - 9391801
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  9391765 agtttgaaccccaaaccttacatatatcatgcattgt 9391801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 13143179 - 13143131
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||  |||||| |||||| ||||||||||||||||||    
T  13143179 gtggtggtcagggttcaaacccccgaccttgcatatattatgcattgtt 13143131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 23250310 - 23250358
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||||||  |||||| ||||||||||||||||||    
T  23250310 gtggtggtcggggtttgaaccctggaccttgcatatattatgcattgtt 23250358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 25603904 - 25603948
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||  ||||||||||| |||||| ||||||||||||||||    
T  25603904 gtggtcaggatttgaaccccaaaccttatatatattatgcattgt 25603948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 32957545 - 32957581
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  32957545 gtttaaaccccaaaccttacatatattatgcattgtt 32957581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 35458789 - 35458821
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| |||||||||||||||||||||    
T  35458789 tttgaaccccaaaccttacatatattatgcatt 35458821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 39688327 - 39688279
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| |||||||||||||||| ||| ||||| |||| |||||||    
T  39688327 gtggtggtcggagtttgaaccccagatcttgcatattttattcattgtt 39688279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 39963563 - 39963517
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  39963563 tggtggtcagagtttgaaccccgaaccttacatatattatgcattgt 39963517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 13796401 - 13796353
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  13796401 gtggtggtcggagtttgtaccccagaccttgcatatattatgcattgtt 13796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 19000020 - 18999980
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  19000020 gtggtggtcagagtttgaaccccaaaccttacatatattat 18999980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 37054259 - 37054337
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatgacgact 122  Q
    ||||||||| |||||||||||||  |||||| |||||||||||||||   ||| ||| |||| |||||||||||||| ||||    
T  37054259 gtggtggtcggagtttgaaccccgaaccttatatatattatgcattg---tccctaccaactgagctaaactcatgaggact 37054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 26590761 - 26590708
Alignment:
Q  58 aaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||||||||| ||||||||||||||||   ||||| ||||||||||||||||||    
T  26590761 aaccccagaccttgcatatattatgcattg---tccttgctaactaagctaaactca 26590708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 1809115 - 1809070
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||    
T  1809115 gtggtggtcagggtttgaaccccaaatcttacatatattatgcatt 1809070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 36170126 - 36170081
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||| || | |||||||||||||||||||    
T  36170126 gtggtggtcagagtttgaacctcatatcttacatatattatgcatt 36170081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 16579364 - 16579412
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| ||||||||| | |||||| ||||||||||||||||||    
T  16579364 gtggtggtcagggtttgaaccacggaccttgcatatattatgcattgtt 16579412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 4763188 - 4763223
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||||||||||||||||||    
T  4763188 gtttgaaccccggaccttacatatattatgcattgt 4763223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 6489066 - 6489031
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  6489066 gtttgaaccccagaccttgcatatattatgcattgt 6489031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 15889482 - 15889435
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||| ||||||| |||||||||||||||||    
T  15889482 gtggtggtcggggtttgaaccctagaccttgcatatattatgcattgt 15889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 16094126 - 16094083
Alignment:
Q  43 ggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||| | |||||||||||||| |||||||||||||||||||    
T  16094126 ggtggtcggggtttgaaccccagatcttacatatattatgcatt 16094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 20688111 - 20688064
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| |||||||||||| || |||||| |||||||||||||||||    
T  20688111 gtggtggccagagtttgaactccggaccttgcatatattatgcattgt 20688064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 23118049 - 23118088
Alignment:
Q  49 cagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  23118049 cagagttcgaaccccaaaccttacatatattatgcattgt 23118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 27903183 - 27903136
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||| |||||||||||||  ||||| ||||||||||||||||||    
T  27903183 tggtggtcggagtttgaaccccgaaccttgcatatattatgcattgtt 27903136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 33014246 - 33014281
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  33014246 gtttgaaccccagacctttcatatattatgcattgt 33014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 89
Target Start/End: Original strand, 36162896 - 36162927
Alignment:
Q  58 aaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||||||||||||||||||||    
T  36162896 aaccccagaccttacatatattatgcattgtt 36162927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 19647511 - 19647545
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||||||||||||| ||||||    
T  19647511 tttgaaccccagaccttacatatattatacattgt 19647545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 32559362 - 32559328
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||||||||||| |||||||||||    
T  32559362 tttgaaccccagaccttacatattttatgcattgt 32559328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 33928709 - 33928663
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| |||||||| |||||| |||||| |||||||||||||||||    
T  33928709 tggtggccagagtttaaaccccggaccttgcatatattatgcattgt 33928663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 5614824 - 5614791
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| ||||||||||||||||||||||    
T  5614824 gtttgaacccccgaccttacatatattatgcatt 5614791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 7215805 - 7215776
Alignment:
Q  57 gaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||||||||||||    
T  7215805 gaaccccagaccttacatatattatgcatt 7215776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 14951645 - 14951690
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  14951645 gtggtggtcggagtttgaacctcagaccatacatatagtatgcatt 14951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 17083595 - 17083628
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||| |||||||||||||||||||||||||    
T  17083595 gtttgaactccagaccttacatatattatgcatt 17083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 24408563 - 24408522
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcat 85  Q
    |||||| | |||||||||||||||||| ||||||||||||||    
T  24408563 gtggtcggggtttgaaccccagaccttgcatatattatgcat 24408522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 25607058 - 25607095
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  25607058 gagttcgaaccccagaccttgcatatattatgcattgt 25607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 3052239 - 3052207
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| |||||||||||||||||||||    
T  3052239 tttgaaccccaaaccttacatatattatgcatt 3052207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 13864415 - 13864367
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||||||| |||||| ||||||||||| ||||||    
T  13864415 gtggtggtcggggtttgaaccccggaccttgcatatattatgtattgtt 13864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 15775931 - 15775883
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| || ||| |||||| ||||||||||||||||||| |||||||    
T  15775931 gtggtggccatagtctgaacctcagaccttacatatattatacattgtt 15775883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 16575312 - 16575352
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    ||||||||||| |||||||| || |||||||||||||||||    
T  16575312 gtggtggtcagggtttgaactccggaccttacatatattat 16575352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 30488992 - 30488948
Alignment:
Q  45 tggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||| |||||||||||||| |||||  |||||||||||||||||    
T  30488992 tggtcggagtttgaaccccaaaccttgtatatattatgcattgtt 30488948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 31708152 - 31708184
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| ||||||||||||||||||    
T  31708152 gaaccccagaccttgcatatattatgcattgtt 31708184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 42473953 - 42473917
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  42473953 gtttgaaccccggaccttgcatatattatgcattgtt 42473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 9977128 - 9977083
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  9977128 gtggtggtcagggtttgaaccccagaccttgcatatattatgcatt 9977083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 8138460 - 8138496
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||||||||||||||||||||||||||    
T  8138460 gtttgaaccccagaccttacatatattatgcattgtt 8138496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 22414449 - 22414508
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    |||| |||||||||||||| |||||||||||||   ||||||||||||||| |||||||||||    
T  22414449 agttagaaccccagacctttcatatattatgca---ttatccttactaactgagctaaactca 22414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 17113450 - 17113498
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||  |||||||||| |||||||| ||||||||||||||||||    
T  17113450 gtggtggtcgaagtttgaacctcagaccttgcatatattatgcattgtt 17113498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 20744206 - 20744162
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  20744206 gtggtcggggtttgaaccccagaccttgcatatattatgcattgt 20744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 34701218 - 34701170
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| | ||||||||||| |||||||| ||||||||||||||||||    
T  34701218 gtggtggccggagtttgaacctcagaccttgcatatattatgcattgtt 34701170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 4455586 - 4455633
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||    
T  4455586 gtggtggtcggggtttgaaccccagaccttgcatatattatgccttgt 4455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 15155794 - 15155759
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  15155794 gtttgaaccccagaccttgcatatattatgcattgt 15155759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 15170002 - 15169955
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||  |||||||||||||||||||||||    
T  15170002 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 15169955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 15178774 - 15178727
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||  |||||||||||||||||||||||    
T  15178774 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 15178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 16390488 - 16390453
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16390488 gtttgaaccccggaccttacatatattatgcattgt 16390453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 24623307 - 24623354
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||  |||||||||||||||||||||||    
T  24623307 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 24623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 27834410 - 27834363
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||    
T  27834410 gtggtggtccgggtttgaaccccagaccttgcatatattatgccttgt 27834363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 88
Target Start/End: Original strand, 28592693 - 28592724
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||||||||||||||||||||    
T  28592693 gaaccccagaccttacatatattatgcattgt 28592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 29283886 - 29283839
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| |||||||||||| ||||||| |||||||||| ||||||    
T  29283886 gtggtggtcggagtttgaaccctagaccttgcatatattatacattgt 29283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 9973288 - 9973242
Alignment:
Q  42 tggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| | ||||| |||||||| |||||||||||||||||||||||    
T  9973288 tggtggccggagttcgaaccccaaaccttacatatattatgcattgt 9973242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 10018470 - 10018425
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||| | |||||||||||||  |||||||||||||||||||||    
T  10018470 gtggtggccggagtttgaaccccgaaccttacatatattatgcatt 10018425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 21029356 - 21029401
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||| ||||||||||  ||||| |||||||||||||||    
T  21029356 gtggtggtcagaatttgaaccccgaaccttgcatatattatgcatt 21029401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 5937700 - 5937656
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||    
T  5937700 gtggtcagattttgaaccccggacctttcatattttatgcattgt 5937656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 9665381 - 9665341
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattat 81  Q
    ||||||||| ||||| ||||||| |||||||||||||||||    
T  9665381 gtggtggtcggagttcgaaccccggaccttacatatattat 9665341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 12808924 - 12808892
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||||| ||||||||||||||||||    
T  12808924 gaaccccagaccttgcatatattatgcattgtt 12808892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 14918293 - 14918337
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||    
T  14918293 gtggtcggggtttgaaccccagaccttgtatatattatgcattgt 14918337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 19265521 - 19265561
Alignment:
Q  48 tcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||| |||||| ||||| |||||||||||    
T  19265521 tcagagtttgaaccccggaccttgcatattttatgcattgt 19265561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 24212540 - 24212576
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||| || ||||||||||||||||||||    
T  24212540 agtttgaaccccatacattacatatattatgcattgt 24212576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32621443 - 32621399
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcat 85  Q
    ||||||||| | ||||||| ||| |||||||||||||||||||||    
T  32621443 gtggtggtcggggtttgaatcccggaccttacatatattatgcat 32621399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 1319 - 1272
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||    
T  1319 gtggtggccggagtttgaactccagaccttacatatattatgcattgt 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 99108 - 99061
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  99108 gtggttgtcggagtttgaaccccagaccttgcatatattatgcattgt 99061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27833391 - 27833438
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  27833391 gtggtggtcggggtttgaaccccggaccttacatatattatgcattgt 27833438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 7994874 - 7994915
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatg 82  Q
    ||||||||| | ||||||||||||||||||||||||||||||    
T  7994874 gtggtggtcggggtttgaaccccagaccttacatatattatg 7994915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 26717918 - 26717963
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  26717918 gtggtggtcagagtttgaaccctggaccttgcatatattatgcatt 26717963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 45046205 - 45046246
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatg 82  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  45046205 gtggtggtcagagtttgaaccccggaccttgcatatattatg 45046246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 3671895 - 3671847
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||    
T  3671895 gtggtggtcggggtttgaactccagaccttgcatatattatgcattgtt 3671847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 30753797 - 30753749
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| | |||||||||| ||||||||||||||| ||||||||||||    
T  30753797 gtggtggccggagtttgaactccagaccttacatattttatgcattgtt 30753749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 34448603 - 34448647
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  34448603 gtggtcagggtttgaaccctggaccttacatatattatgcattgt 34448647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 39280816 - 39280856
Alignment:
Q  49 cagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  39280816 cagagtttgaaccccggaccttgcatatattatgcattgtt 39280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 43539106 - 43539142
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43539106 gtttgaaccccggaccttacatatattatgcattgtt 43539142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 1046611 - 1046557
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactca 114  Q
    ||||||||||||||||||||||||||||   ||||| ||||||||| | |||||||||    
T  1046611 gaaccccagaccttacatatattatgca---ttatctttactaactgacctaaactca 1046557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 5041398 - 5041363
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||||| |||||||||||||||||    
T  5041398 gtttgaaccccagaccttgcatatattatgcattgt 5041363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 5579764 - 5579721
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgca 84  Q
    ||||||||| | |||||||||||||||||| |||||||||||||    
T  5579764 gtggtggtcggggtttgaaccccagaccttgcatatattatgca 5579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 10421997 - 10422032
Alignment:
Q  51 gagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||| |||||||||||||||||||    
T  10421997 gagtttgaaccccagatcttacatatattatgcatt 10422032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 18023750 - 18023703
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||||||    
T  18023750 gtggtggtcggagtttgaaccctggaccttgcatatattatgcattgt 18023703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 18773746 - 18773793
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | ||||||||||| |||||||||||| |||||||||||    
T  18773746 gtggtggtcggggtttgaaccccggaccttacatattttatgcattgt 18773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 34773302 - 34773255
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||    
T  34773302 gtggtggtcagagtttaaacctcataccttgcatatattatgcattgt 34773255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 40187638 - 40187673
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40187638 gtttgaaccgcagaccttacatatattatgcattgt 40187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 42227795 - 42227842
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  42227795 gtggtggtcggagtttgaacctcgaaccttacatatattatgcattgt 42227842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 11908977 - 11909015
Alignment:
Q  50 agagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  11908977 agagtttgaacaccagaccttgcatatattatgcattgt 11909015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 35666361 - 35666327
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||||||||||| ||||||||||||||||||||    
T  35666361 tttgaaccccagacattacatatattatgcattgt 35666327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 3536247 - 3536292
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||    
T  3536247 gtggtcggagtttgaatcccgaaccttacatatattatgcattgtt 3536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 5435562 - 5435599
Alignment:
Q  52 agtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  5435562 agtttgaaccccagatcttacatatattacgcattgtt 5435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 19599214 - 19599169
Alignment:
Q  43 ggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| | ||||||||||| |||||| |||||||||||||||||    
T  19599214 ggtggtcggggtttgaaccccggaccttgcatatattatgcattgt 19599169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 21164748 - 21164793
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||||||| |||| || |||||| ||||||||||||||    
T  21164748 gtggtggtcagagtttaaacctcaaaccttatatatattatgcatt 21164793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 21327531 - 21327580
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatatta-tgcattgtt 89  Q
    ||||||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  21327531 gtggtggtcggagtttgaaccccaaaccttgcatatattattgcattgtt 21327580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 21751616 - 21751661
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||||| |||| | ||| |||||||||||||||    
T  21751616 gtggtggtcagagtttgaaacccaaatcttgcatatattatgcatt 21751661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 44868147 - 44868192
Alignment:
Q  43 ggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||| || |||||||| | ||||||||||||||||||||||||    
T  44868147 ggtggtcggaatttgaacctcggaccttacatatattatgcattgt 44868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 45151436 - 45151403
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcatt 86  Q
    |||||||||||| |||||||||||||||||||||    
T  45151436 gtttgaaccccaaaccttacatatattatgcatt 45151403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 46371052 - 46371007
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||||||    
T  46371052 gtggtggtcggagtttgaaccccggaccttggatatattatgcatt 46371007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 1285059 - 1285107
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||| | ||||||| || ||| ||||||||||||||||||    
T  1285059 gtggtggtcagagctcgaaccccggatcttgcatatattatgcattgtt 1285107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 5458073 - 5458109
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  5458073 gtttgaatcccagaccttgcatatattatgcattgtt 5458109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 7670493 - 7670457
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  7670493 gtttgaaccccggaccttgcatatattatgcattgtt 7670457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 9139524 - 9139476
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||| |||| ||| |||| |||||| |||||||||||||||||||||    
T  9139524 gtggtgttcagggttcgaactccagactttacatatattatgcattgtt 9139476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 16537538 - 16537605
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatgacgactg 123  Q
    ||||||||||||||||||  ||||||||||||   |||||| ||| |||| ||||||||||| || |||||    
T  16537538 gtttgaaccccagaccttgtatatattatgca---ttatccctaccaactgagctaaactcacgatgactg 16537605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 16628124 - 16628057
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgttatccttactaactaagctaaactcatgacgactg 123  Q
    ||||||||||||||||||  ||||||||||||   |||||| ||| |||| ||||||||||| || |||||    
T  16628124 gtttgaaccccagaccttgtatatattatgca---ttatccctaccaactgagctaaactcacgatgactg 16628057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 16971067 - 16971019
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||| | ||||||||||||||||||| |||||||    
T  16971067 gtggtggtcggggtttgaatctcagaccttacatatattatacattgtt 16971019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 25251569 - 25251533
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||||||| |||||| |||||||||||||||||    
T  25251569 gtttgaaccccaaaccttatatatattatgcattgtt 25251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 31281767 - 31281803
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  31281767 gtttgaatcccagaccttgcatatattatgcattgtt 31281803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 31292759 - 31292807
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||| | ||||| |||||||||||||| ||| ||||||||||||||    
T  31292759 gtggtggccggagttcgaaccccagaccttgcatgtattatgcattgtt 31292807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 37230031 - 37230063
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||||||||||| |||||||||||||||    
T  37230031 tttgaaccccagaccttgcatatattatgcatt 37230063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 38553873 - 38553841
Alignment:
Q  57 gaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||| ||||||||||||||||||||||||    
T  38553873 gaaccccaaaccttacatatattatgcattgtt 38553841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 45088946 - 45088899
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||||||| |||||| ||||||||||||||||||    
T  45088946 gtggtggtcggggtttgaacccc-gaccttgcatatattatgcattgtt 45088899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 47342427 - 47342471
Alignment:
Q  44 gtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    |||||| |||||||||| || |||||| |||||||||||||||||    
T  47342427 gtggtcggagtttgaactccggaccttgcatatattatgcattgt 47342471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 53370 - 53417
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||| | |||||||||||||||||| ||||| |||||||||||    
T  53370 gtggtggtcggggtttgaaccccagaccttgcatattttatgcattgt 53417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 42337 - 42371
Alignment:
Q  54 tttgaaccccagaccttacatatattatgcattgt 88  Q
    ||||||||||||||||| |||||||||||||||||    
T  42337 tttgaaccccagaccttgcatatattatgcattgt 42371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 39455 - 39410
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcatt 86  Q
    ||||||||| | |||||||||||||||||||||||| ||| |||||    
T  39455 gtggtggtcggggtttgaaccccagaccttacatattttaagcatt 39410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 122947 - 122914
Alignment:
Q  56 tgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||||||| ||||||||||||||||||    
T  122947 tgaaccccagaccttgcatatattatgcattgtt 122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 1167 - 1203
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  1167 gtttgaaccccggaccttgcatatattatgcattgtt 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 14176 - 14224
Alignment:
Q  41 gtggtggtcagagtttgaaccccagaccttacatatattatgcattgtt 89  Q
    ||||||||| | ||||||||| || ||||| ||||||||||||||||||    
T  14176 gtggtggtcggggtttgaaccacataccttgcatatattatgcattgtt 14224  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 118878 - 118842
Alignment:
Q  53 gtttgaaccccagaccttacatatattatgcattgtt 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  118878 gtttgaactccagaccttacatattttatgcattgtt 118842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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