View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10055_low_10 (Length: 240)
Name: NF10055_low_10
Description: NF10055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10055_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 46783590 - 46783796
Alignment:
| Q |
16 |
gacgttggctagggagcagggtgattaagattggaagaggaacaatacacttgccatggttattggtttatgaccatcaccccttttttcttatttaatt |
115 |
Q |
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| T |
46783590 |
gacgttggctagggagcagggtgattaagattggaagaggaacaatacacttgccatggttattggtttatgaccatcaccccttttttcttatttaatt |
46783689 |
T |
|
| Q |
116 |
tgcaatatgtattaaaagctaggcaagaacctagctttagtctttttcttcgtggcagttgcattttgctataacacatgtctttataattccatgaata |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46783690 |
tgcaatatgtattaaaagctaggcaagaacctagctttagtctttttcttcgtgacagttgcattttgctataacacatgtctttataattccatgaata |
46783789 |
T |
|
| Q |
216 |
accccaa |
222 |
Q |
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||||||| |
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| T |
46783790 |
accccaa |
46783796 |
T |
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