View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10056_high_3 (Length: 495)

Name: NF10056_high_3
Description: NF10056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10056_high_3
NF10056_high_3
[»] chr2 (44 HSPs)
chr2 (20-486)||(30410543-30411011)
chr2 (422-483)||(42327392-42327453)
chr2 (422-486)||(13803513-13803577)
chr2 (427-484)||(4262298-4262355)
chr2 (422-482)||(29503289-29503349)
chr2 (422-480)||(12994376-12994434)
chr2 (428-482)||(37480099-37480153)
chr2 (422-486)||(42922432-42922497)
chr2 (422-486)||(11251105-11251169)
chr2 (430-482)||(26482119-26482170)
chr2 (424-480)||(42860368-42860424)
chr2 (422-485)||(11062378-11062441)
chr2 (428-486)||(19244133-19244191)
chr2 (428-482)||(23052521-23052575)
chr2 (428-482)||(39715016-39715070)
chr2 (422-484)||(42602572-42602634)
chr2 (421-486)||(1435081-1435145)
chr2 (430-479)||(18825367-18825415)
chr2 (430-482)||(6099517-6099568)
chr2 (428-480)||(12086129-12086181)
chr2 (430-482)||(12517751-12517803)
chr2 (422-486)||(16918572-16918636)
chr2 (430-470)||(30359680-30359720)
chr2 (422-486)||(40416384-40416448)
chr2 (439-479)||(41908639-41908679)
chr2 (434-486)||(45026773-45026825)
chr2 (425-480)||(10449043-10449098)
chr2 (422-485)||(19322786-19322849)
chr2 (422-485)||(21195671-21195734)
chr2 (428-482)||(19016055-19016109)
chr2 (428-482)||(21213793-21213847)
chr2 (428-486)||(37755965-37756023)
chr2 (422-479)||(17737625-17737682)
chr2 (422-479)||(28846709-28846766)
chr2 (422-486)||(727634-727698)
chr2 (422-486)||(1729834-1729898)
chr2 (421-485)||(6859307-6859371)
chr2 (424-460)||(7667489-7667525)
chr2 (428-484)||(7799031-7799087)
chr2 (430-486)||(8192474-8192529)
chr2 (430-482)||(26276381-26276433)
chr2 (430-482)||(31681075-31681127)
chr2 (430-474)||(36538874-36538918)
chr2 (446-482)||(40791488-40791524)
[»] chr8 (38 HSPs)
chr8 (422-486)||(6536538-6536602)
chr8 (422-484)||(3624598-3624660)
chr8 (428-484)||(968386-968442)
chr8 (422-482)||(16852358-16852418)
chr8 (422-486)||(18540316-18540380)
chr8 (422-482)||(19703485-19703545)
chr8 (427-486)||(33017237-33017296)
chr8 (422-485)||(43594313-43594376)
chr8 (428-482)||(28783084-28783138)
chr8 (421-486)||(8794339-8794404)
chr8 (422-470)||(2203510-2203558)
chr8 (432-480)||(9126584-9126631)
chr8 (422-486)||(35690058-35690122)
chr8 (422-485)||(11819794-11819857)
chr8 (428-486)||(6436549-6436607)
chr8 (422-483)||(6569768-6569829)
chr8 (430-475)||(26688891-26688936)
chr8 (432-485)||(27750758-27750811)
chr8 (430-482)||(3524399-3524451)
chr8 (430-482)||(6530833-6530884)
chr8 (422-486)||(12988446-12988510)
chr8 (428-480)||(29858049-29858101)
chr8 (429-485)||(44780109-44780165)
chr8 (430-481)||(18897192-18897243)
chr8 (428-483)||(29431035-29431090)
chr8 (425-484)||(34628663-34628722)
chr8 (428-486)||(3305182-3305240)
chr8 (434-484)||(22193360-22193410)
chr8 (428-486)||(23361643-23361701)
chr8 (431-485)||(27871695-27871749)
chr8 (428-482)||(36205219-36205273)
chr8 (429-486)||(13129693-13129750)
chr8 (422-483)||(28566123-28566183)
chr8 (422-483)||(28573746-28573806)
chr8 (433-465)||(11793536-11793568)
chr8 (428-464)||(25389480-25389516)
chr8 (425-465)||(33823086-33823126)
chr8 (430-482)||(40136961-40137012)
[»] chr7 (52 HSPs)
chr7 (422-486)||(26459404-26459468)
chr7 (422-485)||(23552136-23552199)
chr7 (422-485)||(43215202-43215265)
chr7 (423-486)||(7721388-7721451)
chr7 (422-485)||(39631862-39631925)
chr7 (428-486)||(17113819-17113877)
chr7 (428-482)||(22760887-22760941)
chr7 (428-484)||(2446332-2446388)
chr7 (423-483)||(30442507-30442567)
chr7 (422-486)||(33222388-33222452)
chr7 (422-486)||(41519258-41519322)
chr7 (429-484)||(17041008-17041063)
chr7 (428-482)||(20335829-20335883)
chr7 (428-486)||(21558152-21558210)
chr7 (430-484)||(22035424-22035478)
chr7 (428-482)||(43590931-43590985)
chr7 (422-463)||(25021352-25021393)
chr7 (430-483)||(29385740-29385793)
chr7 (435-484)||(48959229-48959278)
chr7 (422-486)||(2962477-2962541)
chr7 (430-470)||(5579244-5579284)
chr7 (422-482)||(7499922-7499982)
chr7 (434-486)||(15137583-15137635)
chr7 (422-482)||(21877826-21877886)
chr7 (427-483)||(30217902-30217958)
chr7 (430-482)||(38374597-38374649)
chr7 (422-482)||(42711976-42712036)
chr7 (422-470)||(42836011-42836059)
chr7 (445-484)||(7309397-7309436)
chr7 (422-485)||(9608624-9608687)
chr7 (422-485)||(9836196-9836259)
chr7 (433-480)||(44628183-44628230)
chr7 (440-486)||(2882986-2883032)
chr7 (423-485)||(5830598-5830660)
chr7 (428-482)||(15905672-15905725)
chr7 (428-482)||(25132376-25132430)
chr7 (432-486)||(29785295-29785349)
chr7 (436-482)||(29916806-29916852)
chr7 (428-486)||(30579359-30579417)
chr7 (428-486)||(33869439-33869497)
chr7 (428-477)||(7801204-7801253)
chr7 (429-486)||(11700190-11700247)
chr7 (445-486)||(13106776-13106817)
chr7 (430-479)||(31835218-31835267)
chr7 (445-486)||(37162344-37162385)
chr7 (428-484)||(5668567-5668623)
chr7 (428-484)||(14058277-14058333)
chr7 (428-484)||(14368305-14368361)
chr7 (445-485)||(18363737-18363777)
chr7 (446-486)||(21570026-21570066)
chr7 (422-486)||(25655222-25655286)
chr7 (422-458)||(25956314-25956350)
[»] chr4 (42 HSPs)
chr4 (422-486)||(37109345-37109409)
chr4 (422-485)||(23377974-23378037)
chr4 (428-486)||(7949448-7949506)
chr4 (430-482)||(32992638-32992690)
chr4 (429-486)||(37274453-37274510)
chr4 (422-486)||(38869786-38869850)
chr4 (422-485)||(7292793-7292856)
chr4 (422-485)||(8030199-8030262)
chr4 (429-486)||(2622389-2622446)
chr4 (422-486)||(10047998-10048062)
chr4 (428-484)||(24234669-24234725)
chr4 (422-486)||(31759652-31759716)
chr4 (430-482)||(46295123-46295175)
chr4 (428-484)||(49576890-49576946)
chr4 (430-485)||(29195121-29195175)
chr4 (422-484)||(13015445-13015507)
chr4 (420-486)||(16581709-16581775)
chr4 (428-482)||(37720212-37720266)
chr4 (424-482)||(37980146-37980203)
chr4 (432-481)||(46329192-46329241)
chr4 (422-486)||(4249195-4249259)
chr4 (422-486)||(19680782-19680846)
chr4 (422-482)||(30938217-30938277)
chr4 (428-480)||(51250522-51250574)
chr4 (430-482)||(56409977-56410028)
chr4 (431-482)||(39509097-39509148)
chr4 (422-484)||(2185028-2185090)
chr4 (428-482)||(19238575-19238629)
chr4 (428-486)||(19531996-19532054)
chr4 (446-480)||(31826651-31826685)
chr4 (440-486)||(51622521-51622567)
chr4 (428-486)||(53496901-53496959)
chr4 (428-482)||(55427198-55427252)
chr4 (432-485)||(8306513-8306566)
chr4 (425-482)||(21344838-21344894)
chr4 (422-486)||(1730483-1730547)
chr4 (430-482)||(8325377-8325429)
chr4 (428-476)||(17618305-17618353)
chr4 (447-479)||(21775923-21775955)
chr4 (422-486)||(46545729-46545793)
chr4 (430-470)||(47202433-47202473)
chr4 (428-484)||(51948504-51948560)
[»] chr6 (22 HSPs)
chr6 (422-485)||(12188298-12188361)
chr6 (428-480)||(10338174-10338226)
chr6 (430-484)||(28841440-28841494)
chr6 (428-484)||(33549128-33549184)
chr6 (428-482)||(21418494-21418548)
chr6 (434-483)||(23910108-23910157)
chr6 (428-484)||(6385886-6385942)
chr6 (433-485)||(20213070-20213122)
chr6 (433-485)||(22107093-22107145)
chr6 (428-484)||(34786450-34786506)
chr6 (430-485)||(20863401-20863456)
chr6 (428-486)||(4105075-4105133)
chr6 (428-486)||(6776601-6776659)
chr6 (428-486)||(14278105-14278163)
chr6 (428-470)||(31623001-31623043)
chr6 (428-482)||(34444827-34444881)
chr6 (428-481)||(1906517-1906570)
chr6 (445-486)||(15951296-15951337)
chr6 (421-486)||(28363954-28364019)
chr6 (422-486)||(1056679-1056743)
chr6 (428-484)||(12234503-12234559)
chr6 (430-482)||(14557988-14558040)
[»] chr5 (24 HSPs)
chr5 (422-482)||(30883196-30883256)
chr5 (429-486)||(14285186-14285243)
chr5 (422-486)||(25627075-25627139)
chr5 (422-486)||(34984824-34984888)
chr5 (422-486)||(37258360-37258424)
chr5 (431-482)||(84851-84902)
chr5 (422-485)||(21549132-21549195)
chr5 (428-482)||(16457834-16457888)
chr5 (428-486)||(16773831-16773889)
chr5 (421-486)||(43442213-43442278)
chr5 (422-486)||(29075799-29075863)
chr5 (422-479)||(16436636-16436692)
chr5 (422-486)||(7918463-7918527)
chr5 (422-486)||(18595995-18596059)
chr5 (425-485)||(25979191-25979251)
chr5 (446-484)||(15416215-15416253)
chr5 (430-480)||(15485420-15485469)
chr5 (422-475)||(892479-892532)
chr5 (433-482)||(3315244-3315293)
chr5 (428-485)||(17028259-17028316)
chr5 (428-484)||(8278271-8278327)
chr5 (430-482)||(16172982-16173033)
chr5 (422-486)||(22737100-22737164)
chr5 (428-480)||(30109308-30109360)
[»] chr1 (48 HSPs)
chr1 (422-486)||(4566566-4566630)
chr1 (422-486)||(8177176-8177240)
chr1 (422-486)||(9165189-9165253)
chr1 (430-482)||(31605846-31605898)
chr1 (422-486)||(33700767-33700831)
chr1 (422-486)||(36371488-36371552)
chr1 (423-486)||(10526842-10526905)
chr1 (428-483)||(15786317-15786372)
chr1 (428-482)||(19528325-19528379)
chr1 (428-486)||(27476765-27476823)
chr1 (425-486)||(31049634-31049695)
chr1 (422-486)||(2799880-2799944)
chr1 (446-486)||(8904456-8904496)
chr1 (422-486)||(17745250-17745314)
chr1 (422-486)||(31794258-31794322)
chr1 (430-482)||(43445989-43446041)
chr1 (422-485)||(6122812-6122875)
chr1 (429-484)||(50901607-50901662)
chr1 (428-486)||(3265948-3266006)
chr1 (428-482)||(52029935-52029989)
chr1 (433-482)||(17297013-17297062)
chr1 (428-481)||(40257423-40257476)
chr1 (430-482)||(4824997-4825049)
chr1 (422-486)||(6650613-6650677)
chr1 (424-484)||(12587290-12587350)
chr1 (422-486)||(21547474-21547538)
chr1 (421-465)||(44046163-44046207)
chr1 (422-486)||(51703797-51703861)
chr1 (422-486)||(52336768-52336832)
chr1 (422-485)||(11063574-11063637)
chr1 (433-484)||(12370192-12370243)
chr1 (422-477)||(21184391-21184446)
chr1 (428-483)||(31383795-31383850)
chr1 (440-486)||(1247149-1247195)
chr1 (428-482)||(16169976-16170030)
chr1 (428-482)||(24047100-24047154)
chr1 (446-484)||(51814536-51814574)
chr1 (428-482)||(52116779-52116833)
chr1 (421-482)||(12259277-12259338)
chr1 (428-481)||(37400298-37400351)
chr1 (430-482)||(952537-952589)
chr1 (430-482)||(6127985-6128036)
chr1 (422-482)||(17410249-17410309)
chr1 (434-478)||(21392867-21392911)
chr1 (422-482)||(25494067-25494127)
chr1 (430-482)||(36428738-36428790)
chr1 (445-481)||(38947471-38947507)
chr1 (430-482)||(39714777-39714828)
[»] chr3 (41 HSPs)
chr3 (423-485)||(37788460-37788522)
chr3 (429-486)||(10445133-10445190)
chr3 (423-486)||(28703398-28703461)
chr3 (422-485)||(32651433-32651496)
chr3 (422-484)||(14186666-14186727)
chr3 (422-483)||(30311324-30311385)
chr3 (421-486)||(46518645-46518710)
chr3 (422-486)||(4222159-4222223)
chr3 (422-486)||(16354886-16354950)
chr3 (430-482)||(16900679-16900731)
chr3 (422-486)||(27093355-27093419)
chr3 (428-488)||(47860780-47860839)
chr3 (422-486)||(53412963-53413027)
chr3 (430-482)||(54990728-54990780)
chr3 (428-486)||(27259185-27259243)
chr3 (431-485)||(30510194-30510248)
chr3 (445-486)||(8796087-8796128)
chr3 (445-486)||(36010783-36010824)
chr3 (430-482)||(19716223-19716275)
chr3 (428-484)||(21960575-21960631)
chr3 (434-486)||(39253727-39253779)
chr3 (428-484)||(40063643-40063699)
chr3 (422-482)||(47454615-47454675)
chr3 (428-484)||(51903874-51903930)
chr3 (422-485)||(8075122-8075185)
chr3 (428-475)||(17554795-17554842)
chr3 (428-482)||(14339634-14339688)
chr3 (432-486)||(15048055-15048109)
chr3 (430-480)||(35623267-35623316)
chr3 (428-482)||(47236969-47237023)
chr3 (424-486)||(53863862-53863923)
chr3 (428-485)||(2667886-2667943)
chr3 (435-484)||(20501727-20501776)
chr3 (424-481)||(26411565-26411622)
chr3 (428-485)||(36720405-36720462)
chr3 (431-484)||(44743851-44743904)
chr3 (445-485)||(3427548-3427588)
chr3 (428-484)||(4844507-4844563)
chr3 (428-484)||(4870203-4870259)
chr3 (428-480)||(8051238-8051290)
chr3 (430-482)||(42799746-42799797)
[»] scaffold0258 (1 HSPs)
scaffold0258 (428-484)||(15319-15375)
[»] scaffold0180 (1 HSPs)
scaffold0180 (422-486)||(19956-20020)
[»] scaffold0299 (1 HSPs)
scaffold0299 (428-486)||(11552-11610)
[»] scaffold0194 (1 HSPs)
scaffold0194 (428-484)||(13042-13098)
[»] scaffold0002 (1 HSPs)
scaffold0002 (422-486)||(94965-95029)
[»] scaffold0063 (1 HSPs)
scaffold0063 (423-486)||(35383-35446)
[»] scaffold0074 (1 HSPs)
scaffold0074 (428-486)||(45753-45811)
[»] scaffold0126 (1 HSPs)
scaffold0126 (422-486)||(25341-25405)
[»] scaffold0065 (1 HSPs)
scaffold0065 (430-486)||(12215-12271)
[»] scaffold0238 (1 HSPs)
scaffold0238 (443-486)||(2705-2748)
[»] scaffold0291 (1 HSPs)
scaffold0291 (428-482)||(2468-2522)
[»] scaffold0172 (1 HSPs)
scaffold0172 (428-482)||(15775-15829)
[»] scaffold1367 (1 HSPs)
scaffold1367 (428-485)||(835-892)
[»] scaffold0517 (1 HSPs)
scaffold0517 (428-481)||(7725-7778)
[»] scaffold0009 (2 HSPs)
scaffold0009 (428-481)||(19846-19899)
scaffold0009 (428-480)||(145913-145965)
[»] scaffold0221 (1 HSPs)
scaffold0221 (430-482)||(2907-2959)
[»] scaffold0122 (1 HSPs)
scaffold0122 (422-478)||(6921-6977)
[»] scaffold0004 (1 HSPs)
scaffold0004 (422-482)||(81562-81622)


Alignment Details
Target: chr2 (Bit Score: 385; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 20 - 486
Target Start/End: Complemental strand, 30411011 - 30410543
Alignment:
Q  20 gcaacctcctcctcttcacttgcattattctcagaatcttcattttcataattgacttgttgtgtagcatcaacaaattttgaaccattagtgcttccag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411011 gcaacctcctcctcttcacttgcattattctcagaatcttcattttcataattgacttgttgtgtagcatcaacaaattttgaaccattagtgcttccag 30410912  T
Q  120 aatcttcaatcattgttttaccttgattcagactttgtgccctgttactcaccttatgacttttcattgaaacttttgctatatcttctctcctttttgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  30410911 aatcttcaatcattgttttaccttgattcagactttgtgccctgttactcacctcatgatttttcattcaaacttttgctatatcttctctcctttttgt 30410812  T
Q  220 cagttcttcattaacctctatttcaagattaatatcatcctggtttctaacctttgatgctgaaccctcaaggttcaccacttcaggctctttgttcttt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30410811 cagttcttcattaacctctatttcaagattaatatcatcctggtttctaatctttgatgctgaaccctcaaggttcaccacttcaggctctttgttcttt 30410712  T
Q  320 ttggccacataaacttgactt--aggattctttttgtgctgttgagaacttannnnnnnnnnnnnnnacaaggaaattaagtttgattcactcaaatgct 417  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||    
T  30410711 ttggccacataaacttgactttgaggattctttttgtgctgttgagaacttattttttaaattttttacaaggaaattaagtttgattcactcaaatgct 30410612  T
Q  418 acaatagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  30410611 acaatagtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctg 30410543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 42327453 - 42327392
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  42327453 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 13803513 - 13803577
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||| ||||||    
T  13803513 tagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctg 13803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 484
Target Start/End: Complemental strand, 4262355 - 4262298
Alignment:
Q  427 atattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||||    
T  4262355 atattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 29503289 - 29503349
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  29503289 tagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 422 - 480
Target Start/End: Complemental strand, 12994434 - 12994376
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    ||||| ||||| |||||||||| |||||||||||||||| |||| ||||||||||||||    
T  12994434 tagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 37480099 - 37480153
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||||||||  |||||||||||||||||||| |||| |||||||||||    
T  37480099 tattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 42922432 - 42922497
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctc-aaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||||||||||||||| |||| |||| |||||||||||||||    
T  42922432 tagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctg 42922497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 11251105 - 11251169
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | | ||||||||||||||||||| |||| ||| |||||||||||    
T  11251105 tagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctg 11251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 26482119 - 26482170
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  26482119 ttggcttgggacctaggagtgtgctcct-ctcaaggtctcaggttcgattctc 26482170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 480
Target Start/End: Original strand, 42860368 - 42860424
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    ||||||||| |||| ||||| ||||||||||||||||| ||| ||||||||||||||    
T  42860368 gtgatattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 11062378 - 11062441
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||||||| || | |||||||||| |||||||||| |||| ||| ||||||||||    
T  11062378 tagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 19244133 - 19244191
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||  |||||||||||||| ||||| |||| |||||||||||||||    
T  19244133 tattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 23052575 - 23052521
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | |||||||||| |||||||||| |||| |||||||||||    
T  23052575 tattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 39715016 - 39715070
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||| |||||||||||    
T  39715016 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 42602572 - 42602634
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| || | ||| |||||||||    
T  42602572 tagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 486
Target Start/End: Original strand, 1435081 - 1435145
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| || ||||||||||  |||||||||||| |||||||||| ||| ||||||||||||||||    
T  1435081 atagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctc-agttcgattctctctg 1435145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 18825367 - 18825415
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  18825367 ttggcttgggacctaggagtgtgctcct-ctcaaggtctcaagtttgatt 18825415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 6099568 - 6099517
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||||||||    
T  6099568 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctc 6099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 12086181 - 12086129
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||||| | ||||||||||||||||||| |||  |||||||||    
T  12086181 tattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattc 12086129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 12517803 - 12517751
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||| ||||||||||||||| |||| ||| |||||||    
T  12517803 ttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctc 12517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 16918636 - 16918572
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||| |||||| || ||||||||||||||||||||| || | ||| |||||||||||    
T  16918636 tagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctg 16918572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 470
Target Start/End: Original strand, 30359680 - 30359720
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  30359680 ttggcttgggaccttggagtgtgctcctcctcaaggtctca 30359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 40416448 - 40416384
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||| ||||| |||| ||||| |||||||||| |||| |||| |||||||||||||||    
T  40416448 tagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctg 40416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 41908679 - 41908639
Alignment:
Q  439 gacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  41908679 gaccttggagtgtgctcctcctcaaggtctcaagttcgatt 41908639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 486
Target Start/End: Original strand, 45026773 - 45026825
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| || ||||||||||||||||||||||| |||| ||| |||||||||||    
T  45026773 cttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctctctg 45026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 10449043 - 10449098
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||| |||| || ||||||||||||||||||||||||  ||| |||||||||    
T  10449043 tgatattgacttgtgatctaggagtgtgctcctcctcaaggtttcatgttcgattc 10449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 19322786 - 19322849
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||| ||||||||| |||||||||||||| |||||| |||  ||| ||||||||||    
T  19322786 tagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctct 19322849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 21195734 - 21195671
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| ||||||| || | ||||||||||||||||||||| |||| ||||||||| ||||    
T  21195734 tagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 21195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 19016055 - 19016109
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| ||| | ||||||||||||||||| ||| |||||||| |||||||    
T  19016055 tattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 21213793 - 21213847
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||| |||||||| |||||||  ||| |||| |||||||||||    
T  21213793 tattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 37756023 - 37755965
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||| ||| ||||||||| ||| ||| ||||||||||| || |||||    
T  37756023 tattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctg 37755965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 17737682 - 17737625
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||| |||||| ||| ||| | ||||||||||||||||||||| |||| ||||||||    
T  17737682 tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgatt 17737625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 28846709 - 28846766
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||| ||||| |||||||||| ||||||||||||||||| | | |||| ||||||||    
T  28846709 tagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 727698 - 727634
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||| ||||||||| || |||||||    ||| |||||||||||||||    
T  727698 tagtgttattggcttgggaccgaggagtgtgttcgtcctcaaaatttcatgttcgattctctctg 727634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 1729834 - 1729898
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | ||||||||||||||||| ||| || |  || |||||||||||    
T  1729834 tagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctg 1729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 6859371 - 6859307
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||||| |||| ||  | |||||||||||||| |||| | |||| ||||||||||||||    
T  6859371 atagtgatattgacttgtgatatgggagtgtgctcctcttcaaagtctcaggttcgattctctct 6859307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 460
Target Start/End: Complemental strand, 7667525 - 7667489
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcct 460  Q
    |||||||||||||||||| | ||||||||||||||||    
T  7667525 gtgatattggcttgggacttgggagtgtgctcctcct 7667489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 7799087 - 7799031
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||| | ||||||||||||||||| ||  ||||  ||||||||||||    
T  7799087 tattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 8192529 - 8192474
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||| || ||||||||||||| ||||||| |||| ||||||||| |||||    
T  8192529 ttggcttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgattccctctg 8192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 26276381 - 26276433
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| ||| | ||||||||||||||||||| |||| ||||| |||||    
T  26276381 ttggcttggggccttgtagtgtgctcctcctcaaggtctcaggttcgtttctc 26276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 31681075 - 31681127
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||| ||||| |||||||||| |||||||| | |||| |||||||||||    
T  31681075 ttggcttgagaccttggagtgtgcttctcctcaaagtctcaggttcgattctc 31681127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 36538874 - 36538918
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagtt 474  Q
    |||||||||||||| ||| ||||||| ||||||||| ||||||||    
T  36538874 ttggcttgggaccttggaatgtgctcttcctcaaggtctcaagtt 36538918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 482
Target Start/End: Complemental strand, 40791524 - 40791488
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  40791524 gagtgtgctccttctcaaggtctcaagttcgattctc 40791488  T

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Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 6536538 - 6536602
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctg 6536602  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 3624598 - 3624660
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| |||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||    
T  3624598 tagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 968386 - 968442
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||    
T  968386 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 16852358 - 16852418
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||    
T  16852358 tagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 18540316 - 18540380
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||| ||||||| || |||||||||| |||| |||||||||||||||    
T  18540316 tagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctg 18540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 19703545 - 19703485
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||||||||||||||||  |||||||||||||||||||| |||| |||||||||||    
T  19703545 tagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 33017237 - 33017296
Alignment:
Q  427 atattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||| |||| | ||||||||||||||||||| |||| |||||||||||||||    
T  33017237 atattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 43594376 - 43594313
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||| |||| ||||||||||||||    
T  43594376 tagtgatattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctct 43594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 28783084 - 28783138
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||    
T  28783084 tattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 486
Target Start/End: Complemental strand, 8794404 - 8794339
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| ||||||||||| |||| | |||||||||||||||| || |||| |||||||||||||||    
T  8794404 atagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctg 8794339  T

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Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 470
Target Start/End: Original strand, 2203510 - 2203558
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  2203510 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 2203558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 9126631 - 9126584
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9126631 ggcttgggaccttggagtgtgctcct-ctcaaggactcaagttcgattc 9126584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 35690122 - 35690058
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || || || ||||||||||||||| |||| |||||||||||||||    
T  35690122 tagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctg 35690058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 11819794 - 11819857
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||| |||| ||||||||| ||||    
T  11819794 tagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactct 11819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 6436607 - 6436549
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||  |||||||| |||||    
T  6436607 tattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattccctctg 6436549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 6569829 - 6569768
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||||||||||||||||| || ||||||||||||||||  |||  ||| ||||||||||||    
T  6569829 tagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctct 6569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 475
Target Start/End: Original strand, 26688891 - 26688936
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttc 475  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||    
T  26688891 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttc 26688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 432 - 485
Target Start/End: Original strand, 27750758 - 27750811
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||| | ||||||||||||||||||||| |||| ||||||||| ||||    
T  27750758 ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 27750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 3524451 - 3524399
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||||||||||| || | |||| ||||||    
T  3524451 ttggcttgggaccttggagtgtgctcctcctcaaggtcttaggttcaattctc 3524399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 6530833 - 6530884
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  6530833 ttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgattctc 6530884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 12988446 - 12988510
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| | |||||||||||||||||||  ||| ||||||| |||||||    
T  12988446 tagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctg 12988510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 29858101 - 29858049
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||||  ||||||||||||||||| ||| |||| |||||||||    
T  29858101 tattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 44780165 - 44780109
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||| | ||||||||||||||||||||| |||| ||| ||||| ||||    
T  44780165 attggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 44780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 481
Target Start/End: Original strand, 18897192 - 18897243
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    |||| |||||||||  |||||||||||||||||||| |||| ||||||||||    
T  18897192 ttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattct 18897243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 483
Target Start/End: Original strand, 29431035 - 29431090
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||||||||||||| | ||||||||||||||||  ||| |||| ||||||||||||    
T  29431035 tattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctct 29431090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 484
Target Start/End: Original strand, 34628663 - 34628722
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||||| || |||||||| | |||||||| | |||| |||||||||||||    
T  34628663 tgatattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctctc 34628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 3305240 - 3305182
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| |||||| || |||| |||||||||||||||| ||||| ||||||| ||||||    
T  3305240 tattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctg 3305182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 484
Target Start/End: Complemental strand, 22193410 - 22193360
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||| ||| ||||||||||||||||||||| || | |||||||||||||    
T  22193410 cttggggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 23361701 - 23361643
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||  | ||||||||||||||||||||| |||| |||| ||||||||||    
T  23361701 tattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 23361643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 431 - 485
Target Start/End: Original strand, 27871695 - 27871749
Alignment:
Q  431 tggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||| || ||||| || |||||||||| | |||||||||||||||||||    
T  27871695 tggcttgggatcttggagtttgttcctcctcaaagtctcaagttcgattctctct 27871749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 36205219 - 36205273
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||| ||| || || ||||||||||||||||||||| |||| |||||||||||    
T  36205219 tattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 13129693 - 13129750
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||| | |||||| ||||||||||||||  ||| |||||||||||||||    
T  13129693 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctg 13129750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 28566123 - 28566183
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||| |||||| |||||||||  |||||||||||| ||||||| |||| ||||||||||||    
T  28566123 tagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctct 28566183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 28573746 - 28573806
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||| |||||| |||||||||  |||||||||||| ||||||| |||| ||||||||||||    
T  28573746 tagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctct 28573806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 11793568 - 11793536
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaagg 465  Q
    ||||||||||| |||||||||||||||||||||    
T  11793568 gcttgggaccttggagtgtgctcctcctcaagg 11793536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 464
Target Start/End: Original strand, 25389480 - 25389516
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaag 464  Q
    |||||||||||||||||||||| |||||||| |||||    
T  25389480 tattggcttgggacctaggagtatgctcctcttcaag 25389516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 465
Target Start/End: Complemental strand, 33823126 - 33823086
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaagg 465  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  33823126 tgatattggcttgagacctgagagtgtgctcctcctcaagg 33823086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 40137012 - 40136961
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||| ||||||| |||| ||| |||||||    
T  40137012 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtttgattctc 40136961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 26459468 - 26459404
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  26459468 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 23552136 - 23552199
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  23552136 tagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctct 23552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 43215202 - 43215265
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  43215202 tagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

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Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 7721388 - 7721451
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| |||||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||||||    
T  7721388 agtggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctg 7721451  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 39631862 - 39631925
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| |||||  |||||||||||||| |||| ||||||||||||||    
T  39631862 tagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctct 39631925  T

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Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 17113819 - 17113877
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| | |||| |||||||||| |||||||||| ||||||||||||||||||||    
T  17113819 tattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctg 17113877  T

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Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 22760887 - 22760941
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  22760887 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

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Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 2446332 - 2446388
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||| | ||||||||||||||||| ||  ||||||||||||||||||    
T  2446332 tattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctc 2446388  T

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Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 30442507 - 30442567
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||    
T  30442507 agtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 33222388 - 33222452
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||| | ||||| ||| ||||||||| |||| |||||||||||||||    
T  33222388 tagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctg 33222452  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 41519322 - 41519258
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||| |||| ||||| |||||||||    
T  41519322 tagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 484
Target Start/End: Complemental strand, 17041063 - 17041008
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 20335883 - 20335829
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||| ||| |||| |||||||||||    
T  20335883 tattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 21558152 - 21558210
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||| ||||| || ||||||||||||||||| |||| |||||||||||||||    
T  21558152 tattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctg 21558210  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 484
Target Start/End: Original strand, 22035424 - 22035478
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||  |||||||||||||||| ||||| || |||||||||||||    
T  22035424 ttggcttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctc 22035478  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 43590931 - 43590985
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||||| | |||| |||||||||||    
T  43590931 tattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 463
Target Start/End: Complemental strand, 25021393 - 25021352
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaa 463  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  25021393 tagtggtattggcttgggacctgggagtgtgctcctcctcaa 25021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 483
Target Start/End: Complemental strand, 29385793 - 29385740
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||||||||||| | ||||||||||||||||||||| |||| ||| ||||||||    
T  29385793 ttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctct 29385740  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 484
Target Start/End: Original strand, 48959229 - 48959278
Alignment:
Q  435 ttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||| ||||||| |||||||||||| |||| |||||||||||||    
T  48959229 ttgggacctatgagtgtgttcctcctcaaggtctcatgttcgattctctc 48959278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 2962477 - 2962541
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||| |||| ||||  |||||||||||||||||||  |||| |||||||||||||||    
T  2962477 tagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctg 2962541  T

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Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 470
Target Start/End: Complemental strand, 5579284 - 5579244
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  5579284 ttggcttgggaccttggagtgtgctcctcctcaaggtctca 5579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 7499982 - 7499922
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||||||||||||||  |||| |||||||| || ||| |||| |||||||||||    
T  7499982 tagtgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctc 7499922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 486
Target Start/End: Original strand, 15137583 - 15137635
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||  ||||||||||||||||||||||| |||| ||| |||||||||||    
T  15137583 cttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctg 15137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 21877826 - 21877886
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||||| |||||||||| |||| ||||||||||| |||| |||| |||||||||||    
T  21877826 tagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctc 21877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 483
Target Start/End: Original strand, 30217902 - 30217958
Alignment:
Q  427 atattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||||||||||  | || | ||||||||||||||||||| |||||||||||||||||    
T  30217902 atattggcttgatatctggaagtgtgctcctcctcaaggtctcaagttcgattctct 30217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 38374649 - 38374597
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||||||  |||||||||||||||||||| || | |||||||||||    
T  38374649 ttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctc 38374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 42711976 - 42712036
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||| |||||| || | ||||||||||||||||||||| |||| |||||||||||    
T  42711976 tagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctc 42712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 42836059 - 42836011
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||| ||||    
T  42836059 tagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctca 42836011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Original strand, 7309397 - 7309436
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  7309397 ggagtgtgctcctcctcgaggtctcaagttcgattctctc 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 9608687 - 9608624
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| ||||||||| || ||||||| ||||||||||||  |||| ||||||||||||||    
T  9608687 tagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 9836259 - 9836196
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| ||||||||| || ||||||| ||||||||||||  |||| ||||||||||||||    
T  9836259 tagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 480
Target Start/End: Complemental strand, 44628230 - 44628183
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||    
T  44628230 gcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattc 44628183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 486
Target Start/End: Original strand, 2882986 - 2883032
Alignment:
Q  440 acctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| ||||||||||||||||||||| |||| |||| ||||||||||    
T  2882986 accttggagtgtgctcctcctcaaggtctcaggttcaattctctctg 2883032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 5830660 - 5830598
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||| |||| |||| ||||||| ||||||||||||   |||||||||||| |||||    
T  5830660 agtgatattggtttggaacctgggagtgtactcctcctcaagatttcaagttcgattatctct 5830598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 15905725 - 15905672
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||| ||||||||||||||||  ||| |||| |||||||||||    
T  15905725 tattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctc 15905672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 25132430 - 25132376
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||| |||||||||||||||||||| || |||| |||| |||||||||||    
T  25132430 tattgacttaggacctaggagtgtgctccttcttaaggtctcaggttcgattctc 25132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 29785349 - 29785295
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| || | ||||||||||||||||||| |||| |||||||||| ||||    
T  29785349 ggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattctttctg 29785295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 436 - 482
Target Start/End: Complemental strand, 29916852 - 29916806
Alignment:
Q  436 tgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  29916852 tgggatctaagagtgtgctcctcctcaaggtctcaggttcgattctc 29916806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 30579359 - 30579417
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||| ||||| ||||||| | ||||||||||| |||| |||||||| ||||||    
T  30579359 tattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctg 30579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 33869497 - 33869439
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||| ||||| | ||||||||||| ||||||| |||  |||||||||||||||    
T  33869497 tattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctg 33869439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 7801204 - 7801253
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcga 477  Q
    ||||| |||||||||| |||||||||||||| |||||| |||| ||||||    
T  7801204 tattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 11700190 - 11700247
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| ||| |  |||| ||||||||||||||| |||| |||||||||||||||    
T  11700190 attggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 13106817 - 13106776
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||| ||||||||||||| |||| |||||||||||||||    
T  13106817 ggagtgtactcctcctcaaggtctcaggttcgattctctctg 13106776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 31835218 - 31835267
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||||||||  || ||||||||||||||||||||| |||| ||||||||    
T  31835218 ttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgatt 31835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 37162385 - 37162344
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||| || ||||||| ||||||||||||||||||||    
T  37162385 ggagtgtgcttcttctcaaggtctcaagttcgattctctctg 37162344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 5668623 - 5668567
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||| | | ||||||||||||||| ||| |||| | |||||||||||    
T  5668623 tattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctc 5668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 14058277 - 14058333
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||| ||||  |||||||||| ||||||||| |||| |||||||||||||    
T  14058277 tattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 14368305 - 14368361
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||| ||||  |||||||||| ||||||||| |||| |||||||||||||    
T  14368305 tattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 18363737 - 18363777
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  18363737 ggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 21570066 - 21570026
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| ||||||||||||| ||||||    
T  21570066 gagtgcgctcctcctcaaggtctcaagttcgattttctctg 21570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 25655286 - 25655222
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||| ||||||| ||  ||||||| ||||||||||||  ||| |||||||||||||||    
T  25655286 tagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctg 25655222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Complemental strand, 25956350 - 25956314
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctc 458  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  25956350 tagtggtattggcttgggaccttggagtgtgctcctc 25956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 37109409 - 37109345
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  37109409 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 23377974 - 23378037
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  23377974 tagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 7949506 - 7949448
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  7949506 tattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 32992638 - 32992690
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 37274510 - 37274453
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 38869786 - 38869850
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || ||||||||||||||||||||| |||| ||||||||| |||||    
T  38869786 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctg 38869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 7292856 - 7292793
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||||    
T  7292856 tagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctct 7292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 8030262 - 8030199
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||    
T  8030262 tagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctct 8030199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 2622446 - 2622389
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||| ||||||||||||||||| | | |||| |||||||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctg 2622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 10047998 - 10048062
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||||| |||| ||||||| |||| || |||| |||||||||||||||    
T  10047998 tagtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctctg 10048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 24234669 - 24234725
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||| | ||||||||||| |||| |||| ||||||||||||||||||    
T  24234669 tattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctc 24234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 31759716 - 31759652
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | ||||||||||||||||||||| ||||  ||||||||| ||||    
T  31759716 tagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctg 31759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 46295123 - 46295175
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||| | ||||||||||||||||||||| |||| |||||||||||    
T  46295123 ttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 49576946 - 49576890
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||| |||| | ||||||||||||||||||||| |||| |||||||||||||    
T  49576946 tattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 485
Target Start/End: Original strand, 29195121 - 29195175
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||    
T  29195121 ttggcttgggaccttggagtgtgctcct-ctcaaggtcgcaagttcgattctctct 29195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 13015445 - 13015507
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| |||||||||||||| | ||||||||||||||||| | | |||| |||||||||||||    
T  13015445 tagtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctc 13015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 486
Target Start/End: Original strand, 16581709 - 16581775
Alignment:
Q  420 aatagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||| ||||||||||| |||| ||||| ||||||||||||||| |||| |||| ||| ||||||    
T  16581709 aatagtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctg 16581775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 37720266 - 37720212
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||| ||||||||| ||||||||||| | || |||||||||||    
T  37720266 tattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctc 37720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Complemental strand, 37980203 - 37980146
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| |||| |||||||||||    
T  37980203 gtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctc 37980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 432 - 481
Target Start/End: Original strand, 46329192 - 46329241
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    |||||||||||| |||||||||||||||||||||  ||| ||||||||||    
T  46329192 ggcttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattct 46329241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 4249195 - 4249259
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||| |||||||||  | ||||||||||||||||||||| |||| ||| |||||||||||    
T  4249195 tagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctg 4249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 19680846 - 19680782
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||| ||||||||| | ||||||||||| ||||||||| || | |||||||||||||||    
T  19680846 tagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 30938277 - 30938217
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||| |||||| || ||||||||||||||||| ||| |||| |||||||||||    
T  30938277 tagtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 51250574 - 51250522
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    ||||||||||||| || |||||||||||| |||||||  ||||||||||||||    
T  51250574 tattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattc 51250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 56409977 - 56410028
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||||||||    
T  56409977 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctc 56410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 482
Target Start/End: Original strand, 39509097 - 39509148
Alignment:
Q  431 tggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| || ||||||||||||||||| ||| |||| |||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 484
Target Start/End: Complemental strand, 2185090 - 2185028
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| || |||||||| |||| ||||||||||||| ||||| | |||| |||||||||||||    
T  2185090 tagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctc 2185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 19238629 - 19238575
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||| ||| |||  |||||||||||    
T  19238629 tattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 19532054 - 19531996
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||| |||||| ||||||||||| |||   ||| |||||||||||||||    
T  19532054 tattggcttgggacataggagcgtgctcctccttaagttttcaggttcgattctctctg 19531996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 480
Target Start/End: Original strand, 31826651 - 31826685
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||||||||| ||||||||||||||    
T  31826651 gagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 486
Target Start/End: Original strand, 51622521 - 51622567
Alignment:
Q  440 acctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| ||||||||||||||||||||| |||| |||||| ||||||||    
T  51622521 accttggagtgtgctcctcctcaaggtctcaggttcgactctctctg 51622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 53496901 - 53496959
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| ||||||||| ||||||||||||||||||| | ||||  || |||||||||||    
T  53496901 tattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctg 53496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 55427252 - 55427198
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||| ||||| ||||||| ||| ||| |||| |||||||||||    
T  55427252 tattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 485
Target Start/End: Original strand, 8306513 - 8306566
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||| ||||| ||||||||||||||||| | | || ||||||||||||||||    
T  8306513 ggcttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctct 8306566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 482
Target Start/End: Original strand, 21344838 - 21344894
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||| |||||||||||||| ||||||||||||| ||||||| |||| |||| ||||||    
T  21344838 tgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcatgttcaattctc 21344894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 1730547 - 1730483
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||||  ||||||||||||| |||| | ||||  ||| ||||||||||    
T  1730547 tagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctg 1730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 8325429 - 8325377
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||| ||||| ||||||||||| ||||||||| || | |||||||||||    
T  8325429 ttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctc 8325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 476
Target Start/End: Original strand, 17618305 - 17618353
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcg 476  Q
    |||||||||| ||||| ||||||||||||||||| ||| |||| |||||    
T  17618305 tattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 21775955 - 21775923
Alignment:
Q  447 agtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||||||||||||||||| |||||||||||||    
T  21775955 agtgtgctcctcctcaaggtctcaagttcgatt 21775923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 46545729 - 46545793
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||| |||||  |||||||||||||||||||  ||||  ||||||| ||||||    
T  46545729 tagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctg 46545793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 470
Target Start/End: Complemental strand, 47202473 - 47202433
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    ||||||||| |||| ||||||||||||||||||||| ||||    
T  47202473 ttggcttggaacctgggagtgtgctcctcctcaaggtctca 47202433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 51948504 - 51948560
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||||| |||||||||||| ||||||| ||| |||| |||| ||||||||    
T  51948504 tattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctc 51948560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 12188361 - 12188298
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  12188361 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctct 12188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 10338226 - 10338174
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  10338226 tattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 484
Target Start/End: Original strand, 28841440 - 28841494
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  28841440 ttggcttgagaccaaggagtgtgctcctcctcaaggtctcaagttcgattctctc 28841494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 33549128 - 33549184
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||    
T  33549128 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 21418494 - 21418548
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||| | | ||||||||||||||||    
T  21418494 tattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctc 21418548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 483
Target Start/End: Complemental strand, 23910157 - 23910108
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||||||||| ||||||||||||||||||||| |||| |||||| |||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcgaatctct 23910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 6385886 - 6385942
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| |||||||||| ||| |||||||||||| |||| |||| |||||||||||||    
T  6385886 tattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctc 6385942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 20213070 - 20213122
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||| ||||||||||||||||||| | |||| ||||||||| ||||    
T  20213070 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 20213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 22107093 - 22107145
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||| ||||||||||||||||||| | |||| ||||||||| ||||    
T  22107093 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 22107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 34786506 - 34786450
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||| || ||||||||||||| ||| | | ||||||||||||||||||    
T  34786506 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 34786450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 485
Target Start/End: Original strand, 20863401 - 20863456
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||||| | ||||||||||||||||||||| ||||  || ||||||||||    
T  20863401 ttggcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctct 20863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 4105075 - 4105133
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||  ||||||||||||||||||||| |||  |||| |||||||| ||||||    
T  4105075 tattggcttgaaacctaggagtgtgctcctccttaagatctcaggttcgattttctctg 4105133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 6776659 - 6776601
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||| || || |||||||||||||| | | |||||||| |||||||||||    
T  6776659 tattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctg 6776601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 14278163 - 14278105
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| |||||| |||||| ||||||||| |||| |||| ||| |||||||||||    
T  14278163 tattggctttggacctgggagtgcgctcctccttaaggtctcaggtttgattctctctg 14278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 31623043 - 31623001
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactca 470  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||    
T  31623043 tattggcttgggacctgggagtgtgctcctcctcgaggtctca 31623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 34444827 - 34444881
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||||||||||  |||||||||||||| ||||| |||| |||||||||||    
T  34444827 tattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctc 34444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 481
Target Start/End: Original strand, 1906517 - 1906570
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    ||||| |||||||| | ||| | ||||||||||||||| |||||||||||||||    
T  1906517 tattgacttgggacattggattatgctcctcctcaaggtctcaagttcgattct 1906570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 15951337 - 15951296
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||||||||| |||| |||| ||||||||||    
T  15951337 ggagtgtgctcctcctcaaggtctcatgttcaattctctctg 15951296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 486
Target Start/End: Original strand, 28363954 - 28364019
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| |||||| |||||| ||  |||||||||||||||||||| ||||  ||||||| ||||||    
T  28363954 atagtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctg 28364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 1056743 - 1056679
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||| |||||| | ||||| ||||| |||||||||  | |||||||||||||||||    
T  1056743 tagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctg 1056679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 12234559 - 12234503
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| |||||||||| ||||||||||||  ||| ||| |||| |||||||||||||    
T  12234559 tattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 14557988 - 14558040
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | |||||||||||||||  || |||| |||||||||||    
T  14557988 ttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc 14558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 30883256 - 30883196
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  30883256 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 14285186 - 14285243
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||||    
T  14285186 attggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 25627075 - 25627139
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| || | ||||||||||||||||||||| |||| |||||||||||||||    
T  25627075 tagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 34984824 - 34984888
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| || | |||||||||||||||    
T  34984824 tagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 37258424 - 37258360
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||||    
T  37258424 tagtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctg 37258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 431 - 482
Target Start/End: Original strand, 84851 - 84902
Alignment:
Q  431 tggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 21549195 - 21549132
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| |||||||||||||||| || | ||||||||||||| |||||    
T  21549195 tagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctct 21549132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 16457834 - 16457888
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||    
T  16457834 tattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctc 16457888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 16773831 - 16773889
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||| |||||||||||||||    
T  16773831 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 486
Target Start/End: Original strand, 43442213 - 43442278
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| |||||| ||| || || ||||||||||||||||||||| |||| |||||||||||||||    
T  43442213 atagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 29075799 - 29075863
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || ||||||||||||||||| ||  |||| |||||||||||||||    
T  29075799 tagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctg 29075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 16436636 - 16436692
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgatt 479  Q
    ||||| |||||||||||||| | ||||||||||||||||||||| |||| ||||||||    
T  16436636 tagtggtattggcttgggactt-ggagtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 7918527 - 7918463
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||||  ||||||||||||| || | |||||||||||||||    
T  7918527 tagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctg 7918463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 18596059 - 18595995
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||| ||||| ||| ||||||||||||||||| || | |||||||| ||||||    
T  18596059 tagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctg 18595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 25979191 - 25979251
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||||||| |  | ||||||| ||||||||||||| |||| ||||||||||||||    
T  25979191 tgatattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctct 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Original strand, 15416215 - 15416253
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  15416215 gagtgtgctcctcctcaaggactgatgttcgattctctc 15416253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 15485469 - 15485420
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||||||    
T  15485469 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattc 15485420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 475
Target Start/End: Complemental strand, 892532 - 892479
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttc 475  Q
    ||||| ||||||||||||||||  |||||| ||||||||||||| |||| ||||    
T  892532 tagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggttc 892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 3315244 - 3315293
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||||| |||||| |||||||||||||| |||| |||||||||||    
T  3315244 gcttgagaccttggagtgcgctcctcctcaaggtctcaggttcgattctc 3315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 17028316 - 17028259
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||| ||||||| | ||||||||||||||||||||| |||| ||| ||||| ||||    
T  17028316 tattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctct 17028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 8278327 - 8278271
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||| | ||||||||||||||||| ||  |||||||| |||| ||||    
T  8278327 tattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctc 8278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 16173033 - 16172982
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||| ||||| ||||||||||||| ||||||| |||| |||||||||||    
T  16173033 ttggcttgagaccttggagtgtgctcct-ctcaaggtctcaggttcgattctc 16172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 22737100 - 22737164
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | | ||||||||||||| ||| | |||| ||||||||| |||||    
T  22737100 tagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctg 22737164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 30109360 - 30109308
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||| ||||| ||||||||||||||||  ||| |||| |||||||||    
T  30109360 tattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 4566566 - 4566630
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||||| |||| |||||||||||||||||| || |||| |||||||||||||||    
T  4566566 tagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 8177240 - 8177176
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || |||||||||||||||||||||  ||| |||||||||||||||    
T  8177240 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 9165253 - 9165189
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||||| ||||||||||||||||||| | |||| |||| ||||||||||    
T  9165253 tagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctg 9165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 31605898 - 31605846
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  31605898 ttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctc 31605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 33700831 - 33700767
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| | || ||||||||||||||||||||| |||| |||||||||||||||    
T  33700831 tagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 36371488 - 36371552
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| || | |||||||||||||||    
T  36371488 tagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 10526842 - 10526905
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||||    
T  10526842 agtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 483
Target Start/End: Complemental strand, 15786372 - 15786317
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||    
T  15786372 tattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 19528379 - 19528325
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  19528379 tattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 27476823 - 27476765
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||| |||||||||||    
T  27476823 tattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctg 27476765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 31049634 - 31049695
Alignment:
Q  425 tgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||| ||||||||||||||||||| |||  ||||  ||||||||||||||    
T  31049634 tgatattggcttgggatctaggagtgtgctcctcctaaagatctcatcttcgattctctctg 31049695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 2799880 - 2799944
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||| |||||| || || ||||||||||||||||||||| |||| |||||||||||||||    
T  2799880 tagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 8904456 - 8904496
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 17745314 - 17745250
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||||  | |||||||||||||| ||| |||| |||||||||||||||    
T  17745314 tagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctg 17745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 31794322 - 31794258
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | ||||||||||||||||||||| ||  |||||||||| |||||    
T  31794322 tagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctg 31794258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 43445989 - 43446041
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| ||| ||||||||||||||||||||| |||| |||||||||||    
T  43445989 ttggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctc 43446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 6122812 - 6122875
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||| |||| ||||||||| ||||    
T  6122812 tagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 6122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 484
Target Start/End: Original strand, 50901607 - 50901662
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||| | ||||||||||||||| ||| ||||| ||||||||||||    
T  50901607 attggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc 50901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 3265948 - 3266006
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||| || | ||||||||||||||||||||| |||| |||||||||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 52029989 - 52029935
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||| ||||||||||||||||||| ||||||| |||| |||||||||||    
T  52029989 tattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgattctc 52029935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 17297013 - 17297062
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||| ||||||||||||||||||||| |||| ||| |||||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctc 17297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 481
Target Start/End: Original strand, 40257423 - 40257476
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    |||||||||| ||||| ||||||||||||||||| ||| ||||||||| |||||    
T  40257423 tattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattct 40257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 4824997 - 4825049
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| |||||||||||||| |||||| |||| ||| |||||||    
T  4824997 ttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctc 4825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 6650613 - 6650677
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| |  ||||| ||||||||||||| | |||| |||||||||||||||    
T  6650613 tagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctg 6650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 484
Target Start/End: Original strand, 12587290 - 12587350
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||| ||||||| ||  |||||||||||||||| ||| |||| |||||||||||||    
T  12587290 gtgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 21547538 - 21547474
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| | |||| |||||||||||| |||  ||| |||||||||||||||    
T  21547538 tagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctg 21547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 44046207 - 44046163
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaagg 465  Q
    |||||| ||||||||||||| || |||||||||||||||||||||    
T  44046207 atagtggtattggcttgggatctgggagtgtgctcctcctcaagg 44046163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 51703797 - 51703861
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| | || ||||||||||||||||||| |  ||| |||||||||||||||    
T  51703797 tagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 52336832 - 52336768
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || |||||||||||||||| |||  |||| |||||||| ||||||    
T  52336832 tagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctg 52336768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 11063574 - 11063637
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||||||||||||||||   |||||| |||||||||||| || | ||||||||||||||    
T  11063574 tagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 484
Target Start/End: Original strand, 12370192 - 12370243
Alignment:
Q  433 gcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||| |||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 477
Target Start/End: Complemental strand, 21184446 - 21184391
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcga 477  Q
    ||||| ||||||||||||||||  |||||||||||| || |||| |||||||||||    
T  21184446 tagtggtattggcttgggacctgcgagtgtgctccttctgaaggtctcaagttcga 21184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 483
Target Start/End: Complemental strand, 31383850 - 31383795
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    |||||||||||||||| ||||||||||||||||   || |||| ||||||||||||    
T  31383850 tattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 486
Target Start/End: Original strand, 1247149 - 1247195
Alignment:
Q  440 acctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| ||||||| ||||||||||||| |||| |||||||||||||||    
T  1247149 acctgggagtgtactcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 16170030 - 16169976
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||| |||||||| ||||||||||||  ||| |||||||||||    
T  16170030 tattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 24047154 - 24047100
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||| ||| | ||||||||||||||||| |||  |||||||||||||||    
T  24047154 tattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Original strand, 51814536 - 51814574
Alignment:
Q  446 gagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  51814536 gagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 52116833 - 52116779
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| | ||||||||||||||||||| | |||| |||| ||||||    
T  52116833 tattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctc 52116779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 482
Target Start/End: Original strand, 12259277 - 12259338
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||  |||||||  | ||||||||||||||||| | | ||||||||||||||||    
T  12259277 atagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 481
Target Start/End: Original strand, 37400298 - 37400351
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    |||||||||| |||||   |||||||||||||| |||| |||||||||||||||    
T  37400298 tattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 37400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 952537 - 952589
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||| ||||||| | |||| ||| |||||||    
T  952537 ttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctc 952589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 6128036 - 6127985
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||| ||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  6128036 ttggtttgggaccttggagcgtgctcctc-tcaaggtctcaagttcgattctc 6127985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 482
Target Start/End: Original strand, 17410249 - 17410309
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||| |||||| || |||||||| |||||||| ||  ||||||||||||||||    
T  17410249 tagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 478
Target Start/End: Original strand, 21392867 - 21392911
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgat 478  Q
    |||||||| || |||||||||||||||||||| |||| |||||||    
T  21392867 cttgggacttaagagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 25494127 - 25494067
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| ||||||||||||| |||||||| |||| |||||| ||| ||| |||||| |||||    
T  25494127 tagtggtattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctc 25494067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 36428738 - 36428790
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||| |||| ||||| ||||||||||||||| |||| ||| |||||||    
T  36428738 ttggcttggtaccttggagtatgctcctcctcaaggtctcatgtttgattctc 36428790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 481
Target Start/End: Complemental strand, 38947507 - 38947471
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  38947507 ggagtgtgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 39714828 - 39714777
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||||||||| || ||||||||||||| ||||||| |||||||| |||||||    
T  39714828 ttggcttgggatcttggagtgtgctcct-ctcaaggtctcaagtttgattctc 39714777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 37788522 - 37788460
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  37788522 agtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctct 37788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 10445190 - 10445133
Alignment:
Q  429 attggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 28703461 - 28703398
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| |||||||| || |||||||||||||| |||||| |||| |||||||||||||||    
T  28703461 agtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 28703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 32651496 - 32651433
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| |||||||||||||||| ||||||||||||||||||||  ||||  |||||||||||||    
T  32651496 tagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 14186666 - 14186727
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  14186666 tagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 30311324 - 30311385
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctct 483  Q
    ||||| ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||||||    
T  30311324 tagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 486
Target Start/End: Original strand, 46518645 - 46518710
Alignment:
Q  421 atagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||| ||||||||||||| || |||||||||||||||||||||  ||| ||| |||||||||||    
T  46518645 atagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctg 46518710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 4222159 - 4222223
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||| || ||||||||||||||||||| | || | |||||||||||||||    
T  4222159 tagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctg 4222223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 16354950 - 16354886
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| ||||  ||||||||||||||||| || |||| |||||||||||||||    
T  16354950 tagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 16900731 - 16900679
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| |||||||||||||| |||||| |||| |||||||||||    
T  16900731 ttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattctc 16900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 27093419 - 27093355
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| || | ||||||||||||||||||||| |||| ||| |||||||||||    
T  27093419 tagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 47860780 - 47860839
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctgct 488  Q
    ||||||||| ||| |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  47860780 tattggctttggatctaggagtgtgctcctcctcaaagtctc-agttcgattctctctgct 47860839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 53412963 - 53413027
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||  |||| ||||||||||||||||||||| |||| |||| ||||||||||    
T  53412963 tagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 53413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 54990728 - 54990780
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| |||| |||||||||||||||| |||| |||||||||||    
T  54990728 ttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctc 54990780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 27259185 - 27259243
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||||| ||||||||||||||||| |||  ||| ||| |||||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctg 27259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 485
Target Start/End: Complemental strand, 30510248 - 30510194
Alignment:
Q  431 tggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||||||||| ||||||| ||| ||| |||| ||||||||||||||    
T  30510248 tggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctct 30510194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 8796128 - 8796087
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  8796128 ggagtatgctcctcctcaaggtctcaagttcgattctctctg 8796087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 36010783 - 36010824
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  36010783 ggagtgtgctcctcctcaaagtctcaagttcgattctctctg 36010824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 19716223 - 19716275
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||  ||||||||||||||||||||| |||  |||||||||||    
T  19716223 ttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctc 19716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 21960575 - 21960631
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||||||  |||||||||||||||| ||| ||||  ||||||||||||    
T  21960575 tattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 486
Target Start/End: Original strand, 39253727 - 39253779
Alignment:
Q  434 cttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||| || |||||||||||||| |||||| |||| |||||||||||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctg 39253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 40063643 - 40063699
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||| ||  |||| |||||||||| |||| ||||||||||||||||||    
T  40063643 tattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctc 40063699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 47454675 - 47454615
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    ||||| |||||||||| || || ||||||||||||||||| ||| |||| |||||||||||    
T  47454675 tagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 51903930 - 51903874
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||||||||||| || |||||||||||||||||  || |||| |||||||||||||    
T  51903930 tattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Complemental strand, 8075185 - 8075122
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||  ||| ||||||||| ||||    
T  8075185 tagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctct 8075122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 475
Target Start/End: Original strand, 17554795 - 17554842
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttc 475  Q
    |||||||||||||||| ||||||||||| ||||||||| |||| ||||    
T  17554795 tattggcttgggacctgggagtgtgctcttcctcaagggctcaggttc 17554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 14339634 - 14339688
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||  | ||||||||||||||||||| | |||| |||||||||||    
T  14339634 tattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 15048109 - 15048055
Alignment:
Q  432 ggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||| || ||| ||||||||||||||||| |||| |||||||| ||||||    
T  15048109 ggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctg 15048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 35623316 - 35623267
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||||||    
T  35623316 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcatgttcgattc 35623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 47237023 - 47236969
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||| ||||||||  |||||||||||||| |||||| |||| |||||||||||    
T  47237023 tattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctc 47236969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 53863923 - 53863862
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| || | |||| ||||||||||    
T  53863923 gtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcaattctctctg 53863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 2667886 - 2667943
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||| || ||||||||||| ||||| ||| |||| |||||||| |||||    
T  2667886 tattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctct 2667943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Original strand, 20501727 - 20501776
Alignment:
Q  435 ttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||  ||||||||||||||| |||| |||| |||||||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctc 20501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 26411565 - 26411622
Alignment:
Q  424 gtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    ||||||||| ||||||||||  |||||||||||| ||||| |  ||||||||||||||    
T  26411565 gtgatattgacttgggacctgagagtgtgctccttctcaatgtttcaagttcgattct 26411622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 36720405 - 36720462
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    |||||||||||||  | ||||||||||||||||| |||  ||| ||||||||||||||    
T  36720405 tattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 484
Target Start/End: Complemental strand, 44743904 - 44743851
Alignment:
Q  431 tggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||| || ||||||||||||||||| ||| |||| |||||||| ||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctc 44743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 3427588 - 3427548
Alignment:
Q  445 ggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  3427588 ggagtgtgctcctcctcaaggtctcagattcgattctctct 3427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 4844563 - 4844507
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||||| || ||||||||||||||||| ||| |||| | |||||||||||    
T  4844563 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4844507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 4870259 - 4870203
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    ||||| ||||||| || ||||||||||||||||| ||| |||| | |||||||||||    
T  4870259 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4870203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 8051238 - 8051290
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||||||||||||| | ||| |||| |||||| ||| ||||||||||||||    
T  8051238 tattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattc 8051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 42799797 - 42799746
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||| ||||    
T  42799797 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgactctc 42799746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 15375 - 15319
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||    
T  15375 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 20020 - 19956
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||| ||||||||||||||| |||| |||||||||||||||    
T  20020 tagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 11552 - 11610
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||||||||| || ||||||||||||||||| ||| |||| |||||||||||||||    
T  11552 tattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 13098 - 13042
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctc 484  Q
    |||||||||| || || ||||||||||||||||||||| |||| |||||||||||||    
T  13098 tattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 95029 - 94965
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| |||| |||| ||| ||||||    
T  95029 tagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctg 94965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 35446 - 35383
Alignment:
Q  423 agtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||| ||||||||||| | |||||||| ||||||||||||||| || |||||||||| ||||||    
T  35446 agtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctg 35383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 45811 - 45753
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| ||||||||||||||||||| |||||||  ||| |||| |||||||||||||||    
T  45811 tattgccttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctg 45753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 25405 - 25341
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||| |||||||||| ||| | ||||||||||||| ||||||| |||| |||||||| ||||||    
T  25405 tagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctg 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 12215 - 12271
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    |||||||||||||| ||||| ||||||||||||||| || |||||  ||||||||||    
T  12215 ttggcttgggaccttggagtttgctcctcctcaaggtctaaagttaaattctctctg 12271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 2748 - 2705
Alignment:
Q  443 taggagtgtgctcctcctcaaggactcaagttcgattctctctg 486  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||    
T  2748 taggagtctgctcctcctcaaggtctcaggttcgattctctctg 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 2522 - 2468
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||| || ||| || ||||||||||||||||||||| |||| |||||||||||    
T  2522 tattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 15829 - 15775
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||||  | ||||| ||||||||||||||| |||||||| |||||||    
T  15829 tattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctc 15775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 892 - 835
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctctct 485  Q
    ||||||||||||| || ||| ||||||||||||| | | |||| ||||||||||||||    
T  892 tattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 481
Target Start/End: Complemental strand, 7778 - 7725
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    |||||||||| |||||   |||||||||||||| |||| |||||||||||||||    
T  7778 tattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 7725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 481
Target Start/End: Complemental strand, 19899 - 19846
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattct 481  Q
    ||||||||||||| || ||||| ||||||||||  ||| |||||||||||||||    
T  19899 tattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 145965 - 145913
Alignment:
Q  428 tattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattc 480  Q
    |||||| ||||||||||||||||||||||| ||| ||| ||||  ||||||||    
T  145965 tattggtttgggacctaggagtgtgctccttctcgaggtctcagattcgattc 145913  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 2959 - 2907
Alignment:
Q  430 ttggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||| ||||||||| | |||||| ||||||| |||| ||||||||||||||||    
T  2959 ttggtttgggaccttgaagtgtgatcctccttaaggtctcaagttcgattctc 2907  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 6977 - 6921
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgat 478  Q
    ||||| ||||||||||||||   ||||||||||||||||||| | |||| |||||||    
T  6977 tagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat 6921  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 81622 - 81562
Alignment:
Q  422 tagtgatattggcttgggacctaggagtgtgctcctcctcaaggactcaagttcgattctc 482  Q
    |||||||||||| |||| | || | ||||||||||||||||||| ||||  ||||||||||    
T  81622 tagtgatattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctc 81562  T

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