View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10056_low_10 (Length: 388)

Name: NF10056_low_10
Description: NF10056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10056_low_10
NF10056_low_10
[»] chr6 (26 HSPs)
chr6 (16-260)||(3020721-3020965)
chr6 (48-185)||(3018705-3018839)
chr6 (250-319)||(605797-605866)
chr6 (259-366)||(6390221-6390328)
chr6 (261-375)||(21002768-21002882)
chr6 (261-375)||(33705801-33705915)
chr6 (260-375)||(12395962-12396078)
chr6 (259-375)||(16408736-16408852)
chr6 (250-366)||(33360758-33360874)
chr6 (261-318)||(3199548-3199605)
chr6 (259-319)||(5146816-5146876)
chr6 (262-318)||(6535408-6535464)
chr6 (259-319)||(9566399-9566459)
chr6 (260-375)||(14630812-14630928)
chr6 (264-319)||(5997548-5997603)
chr6 (258-319)||(33877786-33877847)
chr6 (259-319)||(3199305-3199365)
chr6 (259-375)||(22695885-22696001)
chr6 (261-375)||(32218842-32218957)
chr6 (264-375)||(33243470-33243581)
chr6 (261-315)||(1827056-1827110)
chr6 (214-256)||(3019403-3019445)
chr6 (261-375)||(21904865-21904979)
chr6 (260-309)||(12395662-12395711)
chr6 (263-315)||(583662-583714)
chr6 (260-312)||(14631092-14631144)
[»] chr8 (21 HSPs)
chr8 (259-375)||(30795077-30795193)
chr8 (259-366)||(10837476-10837584)
chr8 (258-366)||(27696975-27697083)
chr8 (260-375)||(7050468-7050583)
chr8 (264-319)||(7678278-7678333)
chr8 (264-319)||(7229971-7230026)
chr8 (261-375)||(10495989-10496103)
chr8 (261-375)||(2057022-2057137)
chr8 (264-319)||(9855662-9855717)
chr8 (261-319)||(4528641-4528699)
chr8 (258-375)||(2705160-2705276)
chr8 (259-375)||(42216253-42216369)
chr8 (264-319)||(42686026-42686081)
chr8 (260-375)||(43857754-43857869)
chr8 (261-319)||(17696956-17697014)
chr8 (250-375)||(7050824-7050949)
chr8 (251-319)||(2232977-2233045)
chr8 (259-366)||(26695406-26695513)
chr8 (264-319)||(32924047-32924102)
chr8 (255-315)||(30794801-30794861)
chr8 (259-315)||(34181491-34181547)
[»] chr7 (24 HSPs)
chr7 (260-375)||(18732637-18732752)
chr7 (260-375)||(21766507-21766622)
chr7 (260-375)||(39997643-39997758)
chr7 (261-375)||(6626166-6626280)
chr7 (264-366)||(21276572-21276674)
chr7 (261-375)||(35193618-35193732)
chr7 (264-366)||(44141412-44141514)
chr7 (260-375)||(38816528-38816643)
chr7 (264-319)||(17356960-17357015)
chr7 (260-375)||(36508331-36508446)
chr7 (260-375)||(41320638-41320753)
chr7 (261-319)||(6607876-6607934)
chr7 (261-375)||(47404149-47404263)
chr7 (258-375)||(8952710-8952827)
chr7 (258-319)||(19277000-19277061)
chr7 (260-318)||(21438242-21438299)
chr7 (265-319)||(24164017-24164071)
chr7 (260-366)||(26174614-26174720)
chr7 (259-363)||(1795670-1795774)
chr7 (264-375)||(48863287-48863398)
chr7 (264-318)||(31849440-31849494)
chr7 (263-375)||(39103000-39103113)
chr7 (258-315)||(47403845-47403902)
chr7 (261-309)||(23999921-23999969)
[»] chr4 (44 HSPs)
chr4 (260-375)||(32328333-32328448)
chr4 (259-375)||(49264172-49264288)
chr4 (251-366)||(43562001-43562116)
chr4 (260-375)||(46008546-46008661)
chr4 (264-366)||(5814083-5814185)
chr4 (260-366)||(47690599-47690705)
chr4 (261-375)||(51892931-51893045)
chr4 (260-377)||(53940408-53940525)
chr4 (251-375)||(28693193-28693316)
chr4 (258-366)||(32384212-32384320)
chr4 (259-375)||(35377659-35377775)
chr4 (260-375)||(1613940-1614055)
chr4 (264-366)||(42495933-42496035)
chr4 (261-366)||(8444657-8444762)
chr4 (261-375)||(31317258-31317371)
chr4 (263-375)||(43979276-43979388)
chr4 (258-366)||(919175-919282)
chr4 (261-375)||(42496228-42496342)
chr4 (249-319)||(42598898-42598968)
chr4 (261-375)||(45311534-45311648)
chr4 (264-366)||(52096569-52096671)
chr4 (261-375)||(18436790-18436903)
chr4 (254-315)||(32384088-32384149)
chr4 (263-319)||(919531-919587)
chr4 (260-375)||(15169272-15169387)
chr4 (264-366)||(45226315-45226416)
chr4 (259-315)||(8445016-8445072)
chr4 (259-315)||(31317586-31317642)
chr4 (262-318)||(41965142-41965198)
chr4 (261-317)||(51716121-51716177)
chr4 (260-375)||(888066-888181)
chr4 (260-319)||(1922493-1922552)
chr4 (260-319)||(23206018-23206077)
chr4 (260-375)||(40005712-40005826)
chr4 (263-366)||(44589304-44589406)
chr4 (259-366)||(51892661-51892768)
chr4 (261-315)||(40147625-40147679)
chr4 (261-315)||(41965498-41965552)
chr4 (261-315)||(53940703-53940757)
chr4 (258-315)||(322005-322062)
chr4 (258-319)||(30560656-30560717)
chr4 (263-319)||(321650-321706)
chr4 (259-315)||(15168911-15168967)
chr4 (263-319)||(43980130-43980186)
[»] chr3 (33 HSPs)
chr3 (248-375)||(40393681-40393807)
chr3 (260-375)||(21440967-21441082)
chr3 (256-375)||(23460936-23461055)
chr3 (259-366)||(29352630-29352737)
chr3 (259-366)||(44638411-44638518)
chr3 (261-318)||(34682637-34682694)
chr3 (259-363)||(19987833-19987937)
chr3 (255-375)||(44397919-44398039)
chr3 (260-363)||(35565382-35565485)
chr3 (260-375)||(47982627-47982742)
chr3 (260-375)||(47991914-47992029)
chr3 (260-375)||(48001201-48001316)
chr3 (260-375)||(48010488-48010603)
chr3 (261-366)||(3017251-3017357)
chr3 (259-375)||(33092032-33092149)
chr3 (262-375)||(47358455-47358568)
chr3 (259-375)||(40790807-40790922)
chr3 (258-375)||(21561098-21561216)
chr3 (257-375)||(16222471-16222588)
chr3 (258-375)||(51753892-51754009)
chr3 (259-375)||(11692153-11692269)
chr3 (260-375)||(49665594-49665710)
chr3 (259-318)||(27957817-27957876)
chr3 (261-375)||(29015718-29015832)
chr3 (254-375)||(21560791-21560912)
chr3 (260-375)||(29352403-29352519)
chr3 (259-315)||(54089838-54089894)
chr3 (262-366)||(54803312-54803416)
chr3 (263-318)||(16731921-16731976)
chr3 (260-315)||(54090168-54090223)
chr3 (259-366)||(38443593-38443699)
chr3 (261-318)||(44638620-44638677)
chr3 (259-315)||(3017531-3017587)
[»] scaffold0825 (1 HSPs)
scaffold0825 (261-375)||(1174-1288)
[»] scaffold0275 (1 HSPs)
scaffold0275 (257-366)||(1262-1371)
[»] chr2 (28 HSPs)
chr2 (250-375)||(18707822-18707947)
chr2 (258-375)||(32928013-32928130)
chr2 (259-375)||(970737-970853)
chr2 (262-366)||(3952222-3952326)
chr2 (263-366)||(9777280-9777383)
chr2 (264-375)||(18906927-18907038)
chr2 (260-375)||(41186248-41186363)
chr2 (261-375)||(14102572-14102686)
chr2 (259-375)||(11108706-11108822)
chr2 (259-319)||(42435004-42435064)
chr2 (264-319)||(34825685-34825740)
chr2 (260-363)||(40691395-40691498)
chr2 (262-319)||(430574-430631)
chr2 (260-375)||(32503978-32504094)
chr2 (251-362)||(14827488-14827599)
chr2 (258-308)||(3963391-3963441)
chr2 (262-364)||(5674303-5674405)
chr2 (259-375)||(4902897-4903013)
chr2 (259-375)||(33850451-33850567)
chr2 (251-375)||(40691583-40691707)
chr2 (260-319)||(5673994-5674053)
chr2 (260-319)||(8031070-8031129)
chr2 (260-319)||(25263704-25263763)
chr2 (264-315)||(39060409-39060460)
chr2 (260-319)||(42813874-42813933)
chr2 (261-315)||(32927710-32927764)
chr2 (259-315)||(2098624-2098680)
chr2 (260-308)||(28625462-28625510)
[»] chr1 (36 HSPs)
chr1 (253-366)||(32487170-32487283)
chr1 (260-375)||(28486619-28486734)
chr1 (260-375)||(47648156-47648271)
chr1 (260-366)||(5132425-5132531)
chr1 (250-315)||(25378677-25378742)
chr1 (263-375)||(38019264-38019376)
chr1 (259-375)||(2937077-2937192)
chr1 (259-366)||(36302736-36302843)
chr1 (260-375)||(38872509-38872624)
chr1 (261-375)||(1342732-1342846)
chr1 (257-375)||(23253625-23253743)
chr1 (249-319)||(40125138-40125208)
chr1 (260-375)||(28838100-28838215)
chr1 (260-319)||(44396397-44396456)
chr1 (261-375)||(6782566-6782680)
chr1 (261-375)||(45951204-45951318)
chr1 (261-375)||(50755959-50756073)
chr1 (259-375)||(2731006-2731123)
chr1 (258-319)||(5905088-5905149)
chr1 (258-319)||(39950229-39950290)
chr1 (262-375)||(47672243-47672356)
chr1 (260-375)||(1366301-1366417)
chr1 (263-375)||(36466235-36466347)
chr1 (261-375)||(30056927-30057042)
chr1 (259-366)||(37350938-37351045)
chr1 (264-366)||(14556321-14556423)
chr1 (259-319)||(29721441-29721501)
chr1 (263-375)||(14556018-14556129)
chr1 (261-316)||(29548581-29548636)
chr1 (260-315)||(30057287-30057342)
chr1 (259-363)||(32005466-32005568)
chr1 (260-315)||(44519339-44519394)
chr1 (260-319)||(44519694-44519753)
chr1 (260-319)||(49628447-49628506)
chr1 (261-315)||(32486859-32486913)
chr1 (263-319)||(17077684-17077740)
[»] chr5 (31 HSPs)
chr5 (260-375)||(5214265-5214380)
chr5 (259-366)||(11062346-11062453)
chr5 (261-375)||(18036219-18036333)
chr5 (260-375)||(17964948-17965063)
chr5 (264-375)||(26408936-26409047)
chr5 (259-319)||(4717168-4717228)
chr5 (258-366)||(15440517-15440625)
chr5 (251-375)||(20166052-20166176)
chr5 (259-375)||(25945626-25945742)
chr5 (259-319)||(30491891-30491951)
chr5 (259-375)||(38245040-38245156)
chr5 (260-363)||(2268565-2268668)
chr5 (264-319)||(3578002-3578057)
chr5 (261-319)||(22619788-22619846)
chr5 (260-318)||(34929537-34929595)
chr5 (261-375)||(39412152-39412266)
chr5 (261-366)||(23910608-23910713)
chr5 (262-318)||(8343043-8343099)
chr5 (259-366)||(4620978-4621085)
chr5 (261-316)||(8145030-8145085)
chr5 (264-318)||(974182-974236)
chr5 (261-375)||(22619447-22619561)
chr5 (253-375)||(39412418-39412540)
chr5 (258-375)||(8144670-8144787)
chr5 (261-366)||(18674156-18674261)
chr5 (259-315)||(2268225-2268281)
chr5 (259-319)||(16968712-16968772)
chr5 (259-375)||(23910293-23910409)
chr5 (259-366)||(18705802-18705909)
chr5 (253-315)||(27858380-27858442)
chr5 (261-318)||(2033738-2033795)
[»] scaffold0044 (1 HSPs)
scaffold0044 (257-375)||(9835-9953)
[»] scaffold0015 (1 HSPs)
scaffold0015 (257-375)||(50015-50133)
[»] scaffold0170 (2 HSPs)
scaffold0170 (262-375)||(5510-5623)
scaffold0170 (259-315)||(5814-5870)
[»] scaffold0302 (2 HSPs)
scaffold0302 (260-375)||(14424-14539)
scaffold0302 (250-375)||(14114-14239)
[»] scaffold1095 (1 HSPs)
scaffold1095 (257-319)||(22-84)
[»] scaffold0651 (2 HSPs)
scaffold0651 (261-375)||(6327-6440)
scaffold0651 (259-375)||(6028-6143)
[»] scaffold0045 (2 HSPs)
scaffold0045 (259-375)||(35638-35754)
scaffold0045 (260-319)||(35333-35392)
[»] scaffold0385 (1 HSPs)
scaffold0385 (259-375)||(12966-13081)
[»] scaffold0036 (1 HSPs)
scaffold0036 (262-318)||(16837-16893)


Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 3020721 - 3020965
Alignment:
Q  16 aaaattaaaatccatgggataatgggaaatgaatgatttctagatctgattgttacatcaatattggtatacactgagatcttgttnnnnnnngtattac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |       ||||||     
T  3020721 aaaataaaaatccatgggataatgggaaatgaatgatttctagatctgattgttacatcaatattggtatgcactgagatcttgctaaaaaaagtattag 3020820  T
Q  116 acaacaatattgctttttaacaggccatcgttttaaggacttttcatttctctcttgtttcttgtacgcaccagatgtatttatgaaaaagtaaataatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  3020821 acaacaatattgctttttaacaggccatcgttttaaggacttttcatttctcttttgtttcttgtacgcaccggatgtatttatgaaaaggtaaataatt 3020920  T
Q  216 atgttaagatgtgggttgtgacggtggtgaagattataaatataa 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3020921 atgttaagatgtgggttgtgacggtggtgaagattataaatataa 3020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 3018705 - 3018839
Alignment:
Q  48 atgatttctagatctgattgttacatcaatattggtatacactgagatcttgttnnnnnnngtattacacaacaatattgctttttaacaggccatcgtt 147  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||| |          ||  |||||| |||||||||||||||  |||||||| ||    
T  3018705 atgattttcagatctgattgtcacatcaatattggtatacactgagatcat---aaaaaaagtgatacacagcaatattgctttttattaggccatcttt 3018801  T
Q  148 ttaaggacttttcatttctctcttgtttcttgtacgca 185  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  3018802 ttaaggacttttcatttctcttttgtttcttgtacgca 3018839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 605866 - 605797
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||| |||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||    
T  605866 tatacatataaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacac 605797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 6390328 - 6390221
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  6390328 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 6390229  T
Q  359 tattggta 366  Q
    ||||||||    
T  6390228 tattggta 6390221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 21002768 - 21002882
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||| ||| || | ||||||||||||    
T  21002768 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacatttttttgtttggaattgatccatgcactttgtaaaaata 21002867  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  21002868 ttggtattggtccct 21002882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 33705801 - 33705915
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||| ||| || | ||||||||||||    
T  33705801 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaata 33705900  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  33705901 ttggtattggtccct 33705915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 12396078 - 12395962
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||         |||||| |||||||| || | ||||||||||    
T  12396078 aggtttaaatatgtctttagtccttgcactttaatcagattttggcattggtccctacactttttttttgtttgacattggtccctgcactttgtaaaaa 12395979  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  12395978 tattggtattggtccct 12395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 16408736 - 16408852
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||  |||||||| |||| ||| |||| |||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  16408736 aaggtttaaatatgcatttagtctttgcactttcatcatattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 16408835  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  16408836 tattggtattggtccct 16408852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 366
Target Start/End: Complemental strand, 33360874 - 33360758
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagt 349  Q
    |||||||  |||||||||||||||||||||||  |||| ||| ||||||||||| ||||| |||||||||        ||||| ||||||||| |  | |    
T  33360874 tataaattcaaggtttaaatatgtctttagtcgttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctacact 33360775  T
Q  350 ttgtaaaaatattggta 366  Q
    |||||||||||||||||    
T  33360774 ttgtaaaaatattggta 33360758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 3199605 - 3199548
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||||||||||||||  | || ||||||||||||||||||||| ||||||||    
T  3199605 ggtttaaatatgtctttagtccttacacttttatcagattttggcattggtccctaca 3199548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 5146816 - 5146876
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||  |||| ||| || |||||||||||||| |||||||||    
T  5146816 aaggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccctacac 5146876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 6535408 - 6535464
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| ||||||||    
T  6535408 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca 6535464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 9566459 - 9566399
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||| ||||| |||||||||    
T  9566459 aaggtttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacac 9566399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 14630812 - 14630928
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | ||||||||||    
T  14630812 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 14630911  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  14630912 tattggtattggtccct 14630928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 5997603 - 5997548
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||| |||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  5997603 ttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacac 5997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 33877786 - 33877847
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||| ||||||||  | || ||| ||||||||||||||||| |||||||||    
T  33877786 taaggtttaaatatgcctttagtccttacactttcatcagattttggcattggtccctacac 33877847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 3199305 - 3199365
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||||||    
T  3199305 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctacac 3199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 22696001 - 22695885
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||| ||||||||  |||| ||| || |||||||||||||| || ||||||        ||||| ||||||||| || | ||||||||||    
T  22696001 aaggtttaaatatgcctttagtccttgcactttcattagattttggcattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaaa 22695902  T
Q  359 tattggtaattgtccct 375  Q
    |||| ||| | ||||||    
T  22695901 tatttgtattggtccct 22695885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 32218842 - 32218957
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | |||||||||||    
T  32218842 ggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttcttttgtttggaattggtccctgcactttgtaaaaat 32218941  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  32218942 attggtactggtccct 32218957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 33243581 - 33243470
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    ||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||          |||| ||||||||| || | |||||||||||||||    
T  33243581 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttttttggaattggtccctgcactttgtaaaaatattg 33243482  T
Q  364 gtaattgtccct 375  Q
    ||| | ||||||    
T  33243481 gtattggtccct 33243470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 1827056 - 1827110
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||    
T  1827056 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccct 1827110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 3019403 - 3019445
Alignment:
Q  214 ttatgttaagatgtgggttgtgacggtggtgaagattataaat 256  Q
    |||||||||||||||| |||||||||| |||||||| ||||||    
T  3019403 ttatgttaagatgtggattgtgacggtagtgaagatcataaat 3019445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 21904865 - 21904979
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| |||||||||||| |||  ||||||||         ||||| ||||||||  || | ||||||||||||    
T  21904865 ggtttaaatatgtctttagtccttgcactttcatcagattttggtattagtccctacaattttttttgtttggaattggtctctgcactttgtaaaaata 21904964  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  21904965 ttggtattggtccct 21904979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 12395662 - 12395711
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattg 309  Q
    |||||||||| |||| || ||| ||||| |||||||||||||||||||||    
T  12395662 aggtttaaatgtgtcattggtccctgcacttttatcagattttggcattg 12395711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 583662 - 583714
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||    
T  583662 tttaaatatgcctttagtccttgcactttcatcagattttggcattggtccct 583714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 14631144 - 14631092
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatc 312  Q
    |||||||||| |||| || ||| ||||| ||| ||||||||||||||||||||    
T  14631144 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatc 14631092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 30795193 - 30795077
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||||| ||||||||        ||||| |||||||||||| | ||||||||||    
T  30795193 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgacccctacacttttttttgtttggaattggtccttgcactttgtaaaaa 30795094  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  30795093 tattggtattggtccct 30795077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 10837584 - 10837476
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||         ||||||||||||||| || | |||||||||    
T  10837584 aaggtttaaatatgtctttagtccttgcacttttatcagattttggcattggtccctacactttttttttgtttgaaattggtccctgcactttgtaaaa 10837485  T
Q  358 atattggta 366  Q
    |||||||||    
T  10837484 atattggta 10837476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 27697083 - 27696975
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    ||||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||    
T  27697083 taaggtttaaatatgtctttagtccttgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 27696984  T
Q  358 atattggta 366  Q
    |||||||||    
T  27696983 atattggta 27696975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 7050468 - 7050583
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  7050468 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 7050567  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  7050568 attggtattggtccct 7050583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 7678278 - 7678333
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  7678278 ttaaatatgtctttagtctctgcatttttatcagattttggcattgatctctacac 7678333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 7229971 - 7230026
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  7229971 ttaaatatgtctttagtccctgcacttttatcagattttggtattgatccctacac 7230026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 10496103 - 10495989
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||| ||| || | ||||||||||||    
T  10496103 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaata 10496004  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  10496003 ttggtattggtccct 10495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 2057137 - 2057022
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnn-gtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||  ||||||||  |||| ||| ||||||||||||||||| |||||||||         ||||||||||||||| |||| |||||||||||    
T  2057137 ggtttaaatatacctttagtccttgcattttcatcagattttggcattggtccctacactttttttttgtttgaaattggtccctgtactttgtaaaaat 2057038  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  2057037 attggtattggtccct 2057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 9855717 - 9855662
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  9855717 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacac 9855662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 4528641 - 4528699
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  4528641 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 4528699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 2705160 - 2705276
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||| |||| |||||| ||        ||||| ||||||||| || | |||||||||    
T  2705160 taaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctatac-tttttttgtttggaattggtccatgcactttgtaaaa 2705258  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  2705259 atattggtattggtccct 2705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 42216253 - 42216369
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||| ||  |||| |||||||| |||||||||||| | |||||||        ||||  |||||||||| | | ||||||||||    
T  42216253 aaggtttaaatatgtctttaatccttgcacttttatcatattttggcattggttcctacacttttttttgtttagaattggtcctcgcactttgtaaaaa 42216352  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  42216353 tattggtattggtccct 42216369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 42686026 - 42686081
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||| |||||||||||| ||| ||||||||||| ||||| |||||||||    
T  42686026 ttaaatatgtcattagtctctgcactttcatcagattttgacattggtccctacac 42686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 43857869 - 43857754
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  43857869 aggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 43857770  T
Q  360 attggtaattgtccct 375  Q
    ||| ||| | ||||||    
T  43857769 attagtattggtccct 43857754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 17697014 - 17696956
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| ||| |||||    
T  17697014 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacac 17696956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 375
Target Start/End: Complemental strand, 7050949 - 7050824
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagt 349  Q
    |||||||||  ||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  |||||||| || | |    
T  7050949 tataaatatttggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgaact 7050850  T
Q  350 ttgtaaaaatattggtaattgtccct 375  Q
    ||||||||||||||||| | ||||||    
T  7050849 ttgtaaaaatattggtattggtccct 7050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 2233045 - 2232977
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||| ||| |||||||||||||||||||||  |||| ||| || || ||||||||||| |||||||||    
T  2233045 ataaaaatatggtttaaatatgtctttagtccttgcactttcattagcttttggcattggtccctacac 2232977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 366
Target Start/End: Original strand, 26695406 - 26695513
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| ||||||||||||||||||  | || ||| |||| |||||||||||| |||||||||        ||||| ||||||||| |  | ||||||||||    
T  26695406 aaggcttaaatatgtctttagtccatccactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaa 26695505  T
Q  359 tattggta 366  Q
    ||||||||    
T  26695506 tattggta 26695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 32924102 - 32924047
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||| |||||||| ||||| ||| ||||||||||| ||||| |||||||||    
T  32924102 ttaaatatgcctttagtccctgcactttcatcagattttgacattggtccctacac 32924047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 30794801 - 30794861
Alignment:
Q  255 atataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||| |||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  30794801 atattaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 30794861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 34181547 - 34181491
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  34181547 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 34181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 18732637 - 18732752
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  18732637 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 18732736  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  18732737 attggtattggtccct 18732752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 21766507 - 21766622
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  21766507 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 21766606  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  21766607 attggtattggtccct 21766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 39997643 - 39997758
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||| |||||  ||||||||        ||||| |||||||||||| | |||||||||||    
T  39997643 aggtttaaatatgtctttagtctttgcactttcatcagattttgacattggcccctacacttttttttgtttggaattggtccttgcactttgtaaaaat 39997742  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  39997743 attggtattggtccct 39997758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 6626166 - 6626280
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  6626166 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaata 6626265  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  6626266 ttggtattggtccct 6626280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 21276674 - 21276572
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| || |||||||||||||| |||||||||        ||||||||||||||| || | |||||||||||||||    
T  21276674 ttaaatatgtctttagtccctgcactttcataagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 21276575  T
Q  364 gta 366  Q
    |||    
T  21276574 gta 21276572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 35193732 - 35193618
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||| ||||| |||||||||        ||||| |||||||||||||| ||||||||||||    
T  35193732 ggtttaaatatgcctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccttgtactttgtaaaaata 35193633  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  35193632 ttggtattggtccct 35193618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 366
Target Start/End: Original strand, 44141412 - 44141514
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||||    
T  44141412 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 44141511  T
Q  364 gta 366  Q
    |||    
T  44141512 gta 44141514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 38816643 - 38816528
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  38816643 aggtttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 38816544  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  38816543 attggtattggtccct 38816528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 17357015 - 17356960
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||    
T  17357015 ttaaatatgtctttagttcctgcactttcatcagattttggcattgatccctacac 17356960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 36508446 - 36508331
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  || | ||| |||||||||||| ||||||||||||||        ||||| ||||||||| || | |||||||||||    
T  36508446 aggtttaaatatgcctttagtccttgtactttcatcagattttggtattgatccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 36508347  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  36508346 attggtattggtccct 36508331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 41320753 - 41320638
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  41320753 aggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 41320654  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  41320653 attggtattggtccct 41320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 6607934 - 6607876
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  6607934 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 6607876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 47404263 - 47404149
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    ||||||||||||| |||||||  |||| ||| ||||||||||||||||| |||||||||         |||| ||||||||| || | ||||||||||||    
T  47404263 ggtttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacacttttttttttttggaattggtccctgcactttgtaaaaata 47404164  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  47404163 ttggtattggtccct 47404149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 8952827 - 8952710
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    ||||||||||||||| |||||||   |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |  | |||||||||    
T  8952827 taaggtttaaatatgcctttagtgcttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaa 8952728  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  8952727 atattggtattggtccct 8952710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 19277061 - 19277000
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||| |||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  19277061 taaggtttaaatatatctttagtccttgcactttcatcagattttggcattggtccctacac 19277000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 21438242 - 21438299
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||||| || ||||| ||| ||||||||||||||||| ||||||||    
T  21438242 aggtttaaatatgtcttta-tccctgcactttcatcagattttggcattggtccctaca 21438299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 24164017 - 24164071
Alignment:
Q  265 taaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  24164017 taaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 24164071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 366
Target Start/End: Original strand, 26174614 - 26174720
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||| |||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | |||||||||||    
T  26174614 aggtttgaatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaat 26174713  T
Q  360 attggta 366  Q
    |||||||    
T  26174714 attggta 26174720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 1795774 - 1795670
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| |||||||| ||||||||||| ||| ||| ||||||||||||||||  ||||||||         ||||| ||||||||  |||| ||||||||||    
T  1795774 aagggttaaatatatctttagtctcagcactttcatcagattttggcattagtccctacatttttttttgtttggaattggtctctgtactttgtaaaaa 1795675  T
Q  359 tattg 363  Q
    |||||    
T  1795674 tattg 1795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 48863287 - 48863398
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    ||||||||| |||||||| ||||| |||  |||||||||||||||| ||||||||         ||||| ||||| ||| || | |||||||||||||||    
T  48863287 ttaaatatgcctttagtccctgcactttcctcagattttggcattggtccctacatttttttttgtttggaattgatccatgcactttgtaaaaatattg 48863386  T
Q  364 gtaattgtccct 375  Q
    ||| | ||||||    
T  48863387 gtattggtccct 48863398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 31849440 - 31849494
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||  ||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  31849440 ttaaatatgcatttagtccctgcactttcatcagattttggcattggtccctaca 31849494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 39103113 - 39103000
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    |||||||||| ||||||||   ||| ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | |||||||||||||    
T  39103113 tttaaatatgcctttagtcctagcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatat 39103014  T
Q  362 tggtaattgtccct 375  Q
    ||||| | ||||||    
T  39103013 tggtattggtccct 39103000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 47403845 - 47403902
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||||  ||| || ||| ||||| ||| |||||||||||||||||||||||    
T  47403845 taaggtttaaatgagtcattggtccctgcactttcatcagattttggcattgatccct 47403902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 23999921 - 23999969
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattg 309  Q
    |||||||||||||||||||||  |||| ||| ||||||||||| |||||    
T  23999921 ggtttaaatatgtctttagtccttgcactttcatcagattttgacattg 23999969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 32328448 - 32328333
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  32328448 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 32328349  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  32328348 attggtattggtccct 32328333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 49264288 - 49264172
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||||||| |||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |||| ||||||||||    
T  49264288 aaggtttaaatatgtctttcgtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgtaattggtccctgtactttgtaaaaa 49264189  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  49264188 tattggtattggtccct 49264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 43562116 - 43562001
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtt 350  Q
    ||||| |||||||||||||||| |||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |  | ||    
T  43562116 ataaaaataaggtttaaatatgcctttagtccctgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtcccttcactt 43562017  T
Q  351 tgtaaaaatattggta 366  Q
    ||||||||||||||||    
T  43562016 tgtaaaaatattggta 43562001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 46008546 - 46008661
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| |||||||||||| | |||||||||||    
T  46008546 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccttgcactttgtaaaaat 46008645  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  46008646 attggtattggtccct 46008661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 5814185 - 5814083
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||||    
T  5814185 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 5814086  T
Q  364 gta 366  Q
    |||    
T  5814085 gta 5814083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 366
Target Start/End: Complemental strand, 47690705 - 47690599
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |  | |||||||||||    
T  47690705 aggtttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaat 47690606  T
Q  360 attggta 366  Q
    |||||||    
T  47690605 attggta 47690599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 51893045 - 51892931
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||        ||||| ||||||||| |  | ||||||||||||    
T  51893045 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctacactttgtaaaaata 51892946  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  51892945 ttggtattggtccct 51892931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 377
Target Start/End: Original strand, 53940408 - 53940525
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| ||||||||| || ||        ||||| ||||||||| || | |||||||||||    
T  53940408 aggtttaaatatgtctttagtccttgcacttttatcagattttgacattgatccatatacttttttttgtttggaattggtccatgcactttgtaaaaat 53940507  T
Q  360 attggtaattgtcccttt 377  Q
    ||||||| | ||||||||    
T  53940508 attggtattggtcccttt 53940525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 28693316 - 28693193
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtt 350  Q
    |||||| ||||||||||||||||||||||||  |||| ||| ||||||||||| ||||| |||||||||        ||||| |||||||||||| |  |    
T  28693316 ataaatttaaggtttaaatatgtctttagtccttgcactttcatcagattttgtcattggtccctacacttttttttgtttggaattggtccttgca-ct 28693218  T
Q  351 tgtaaaaatattggtaattgtccct 375  Q
    |||||||||||||||| | ||||||    
T  28693217 tgtaaaaatattggtattggtccct 28693193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 32384320 - 32384212
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    ||||| |||||||||||||||||| ||||| ||| ||||||||||||||||| ||| |||||        ||||| ||||||||| || | |||||||||    
T  32384320 taaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactttgtaaaa 32384221  T
Q  358 atattggta 366  Q
    |||||||||    
T  32384220 atattggta 32384212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 35377659 - 35377775
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||  |||||||  |||| |||||||||||||||| |||| |||||||||        ||||| |||||||||||| | ||||||||||    
T  35377659 aaggtttaaatatgcgtttagtccttgcacttttatcagattttggtattggtccctacacttttttttgtttggaattggtccttgcactttgtaaaaa 35377758  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  35377759 tattggtattggtccct 35377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 1613940 - 1614055
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  1613940 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 1614039  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  1614040 attggtattggtccct 1614055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 366
Target Start/End: Original strand, 42495933 - 42496035
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| ||||||||||| ||||| |||||||||        ||||| ||||||||| || | |||||||||||||||    
T  42495933 ttaaatatgtctttagtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 42496032  T
Q  364 gta 366  Q
    |||    
T  42496033 gta 42496035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 8444657 - 8444762
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  | || ||| ||||||||||||||||| |||||||||        ||||||||||||||| |  | ||||||||||||    
T  8444657 ggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctacactttgtaaaaata 8444756  T
Q  361 ttggta 366  Q
    ||||||    
T  8444757 ttggta 8444762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 31317258 - 31317371
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  31317258 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaata 31317356  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  31317357 ttggtattggtccct 31317371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 43979276 - 43979388
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    |||||||||||||||| ||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||||    
T  43979276 tttaaatatgtctttaatccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatatt 43979375  T
Q  363 ggtaattgtccct 375  Q
    |||| | ||||||    
T  43979376 ggtattggtccct 43979388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 919175 - 919282
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||| |||| |||||| ||||| ||| ||||||||||||||||| || || |||        |||||| ||||||||||||| |||||||||    
T  919175 taaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtctctgcac-tttttttgtttgacattggtccttgtactttgtaaaa 919273  T
Q  358 atattggta 366  Q
    |||||||||    
T  919274 atattggta 919282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 42496342 - 42496228
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    ||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  ||||||||||||| ||||||||||||    
T  42496342 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgtactttgtaaaaata 42496243  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  42496242 ttggtattggtccct 42496228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 42598898 - 42598968
Alignment:
Q  249 ttataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||| ||||| ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  42598898 ttattaatattaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacac 42598968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 45311648 - 45311534
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| ||| ||||         ||||| ||||||||| || | ||||||||||||    
T  45311648 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccttacatttttttttgtttggaattggtccctgcactttgtaaaaata 45311549  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  45311548 ttggtattggtccct 45311534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 366
Target Start/End: Original strand, 52096569 - 52096671
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| ||| |||||        ||||| ||||||||| |  | |||||||||||||||    
T  52096569 ttaaatatgtctttagtccctgcattttcatcagattttggcattggtccatacactttattttgtttggaattggtccctacactttgtaaaaatattg 52096668  T
Q  364 gta 366  Q
    |||    
T  52096669 gta 52096671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 18436790 - 18436903
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  18436790 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaata 18436888  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  18436889 ttggtattggtccct 18436903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 32384088 - 32384149
Alignment:
Q  254 aatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||||||||||||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  32384088 aatataaggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccct 32384149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 919587 - 919531
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||| |  || || |||||||||||||||||||||||||||||||    
T  919587 tttaaatatgtctttaattcctacatttttatcagattttggcattgatccctacac 919531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 15169387 - 15169272
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||   ||| ||| ||||||||||||| ||| ||||||||         ||||| ||||||||| || | |||||||||||    
T  15169387 aggtttaaatatgtctttagtcctggcactttcatcagattttggcgttggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaat 15169288  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  15169287 attggtattggtccct 15169272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 45226416 - 45226315
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    ||||||||| |||||||| ||||| ||| |||| |||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||||    
T  45226416 ttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaatattg 45226318  T
Q  364 gta 366  Q
    |||    
T  45226317 gta 45226315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 8445072 - 8445016
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||||||||||||||||||||| |||||    
T  8445072 aaggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccct 8445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 31317642 - 31317586
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||    
T  31317642 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccct 31317586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 41965142 - 41965198
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||| ||  |||| ||| ||||||||||||||||| ||||||||    
T  41965142 gtttaaatatgtctttaatccttgcactttcatcagattttggcattggtccctaca 41965198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 51716121 - 51716177
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctac 317  Q
    |||||||||||||||||||||  |||| ||| |||| |||||||||||| |||||||    
T  51716121 ggtttaaatatgtctttagtccttgcactttcatcaaattttggcattggtccctac 51716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 888066 - 888181
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||| |||| || ||| ||||| ||||||||||||||||||||| ||| | |||        |||||  |||||||| || | |||||||||||    
T  888066 aggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcacttttttttgtttggcattggtccctgcactttgtaaaaat 888165  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  888166 attggtattggtccct 888181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 1922493 - 1922552
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| | |||||||    
T  1922493 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggttcctacac 1922552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 23206077 - 23206018
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||||||  | || ||| ||||||||||||||||  |||||||||    
T  23206077 aggtttaaatatgtctttagtcctttcactttcatcagattttggcattagtccctacac 23206018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 40005826 - 40005712
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||  ||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | |||||||||||    
T  40005826 aggtttaaatatacctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaat 40005728  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  40005727 attggtattggtccct 40005712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 44589406 - 44589304
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    |||||||||||||||||||  || | ||  |||||||||| ||||||||||||||||        ||||| ||||||||| || | ||||||||||||||    
T  44589406 tttaaatatgtctttagtccttgtacttccatcagattttagcattgatccctacacttttttttgtttggaattggtcc-tgcactttgtaaaaatatt 44589308  T
Q  363 ggta 366  Q
    ||||    
T  44589307 ggta 44589304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 366
Target Start/End: Original strand, 51892661 - 51892768
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  |||||||| || | ||||||||||    
T  51892661 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 51892760  T
Q  359 tattggta 366  Q
    ||||||||    
T  51892761 tattggta 51892768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 40147679 - 40147625
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||||||||||| |  |||| ||| ||||||||||||||||| |||||    
T  40147679 ggtttaaatatgtctttagaccttgcactttcatcagattttggcattggtccct 40147625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 41965552 - 41965498
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||    
T  41965552 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccct 41965498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 53940757 - 53940703
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||| |||| || ||| ||||| ||||||||||||||||||||| |||||    
T  53940757 ggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccct 53940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 322062 - 322005
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  322062 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 322005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 30560717 - 30560656
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||| |||||||||||||||||  ||||| ||| |||| |||||||||||| |||| ||||    
T  30560717 taaggcttaaatatgtctttagttcctgcactttcatcatattttggcattggtcccaacac 30560656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 321650 - 321706
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||| |||||||  | || ||| ||||||||||||||||| |||||||||    
T  321650 tttaaatatgtttttagtccttacactttcatcagattttggcattggtccctacac 321706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 15168911 - 15168967
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  15168911 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 15168967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 43980186 - 43980130
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||||||    
T  43980186 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctacac 43980130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 40393807 - 40393681
Alignment:
Q  248 attataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgta 347  Q
    |||||||| |||||||||||||||||||||||||   ||| ||||||||||||||||||||| |||| ||||        ||||||||||||||| || |    
T  40393807 attataaa-ataaggtttaaatatgtctttagtcctcgcacttttatcagattttggcattggtcccaacacttttttttgtttgaaattggtccatgca 40393709  T
Q  348 gtttgtaaaaatattggtaattgtccct 375  Q
     |||||||||||||||||| | ||||||    
T  40393708 ctttgtaaaaatattggtattggtccct 40393681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 21440967 - 21441082
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||||||        ||||| ||||||||| || | |||||||||||    
T  21440967 aggtttaaatatgtctttaatccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 21441066  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  21441067 attggtattggtccct 21441082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 375
Target Start/End: Original strand, 23460936 - 23461055
Alignment:
Q  256 tataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaa 355  Q
    ||||| ||||||||||| ||||||||  |||| ||||||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||    
T  23460936 tataaagtttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaa 23461035  T
Q  356 aaatattggtaattgtccct 375  Q
    ||||||||||| | ||||||    
T  23461036 aaatattggtattggtccct 23461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 29352737 - 29352630
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||||||||||||||        ||||| ||||||||  || | ||||||||||    
T  29352737 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtctctgcactttgtaaaaa 29352638  T
Q  359 tattggta 366  Q
    ||||||||    
T  29352637 tattggta 29352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 366
Target Start/End: Original strand, 44638411 - 44638518
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  44638411 aaggtttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccatgcactttgtaaaaa 44638510  T
Q  359 tattggta 366  Q
    ||||||||    
T  44638511 tattggta 44638518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 34682694 - 34682637
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  34682694 ggtttaaatatgtctttagtccttgcatttttatcagattttggcattgatccctaca 34682637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 19987833 - 19987937
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||         ||||||||||||||| || | ||||||||||    
T  19987833 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacatgtttttttgtttgaaattggtccctgcactttgtaaaaa 19987932  T
Q  359 tattg 363  Q
    |||||    
T  19987933 tattg 19987937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 375
Target Start/End: Original strand, 44397919 - 44398039
Alignment:
Q  255 atataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgta 354  Q
    ||||||||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||    
T  44397919 atataaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgta 44398018  T
Q  355 aaaatattggtaattgtccct 375  Q
    |||||||||||| | ||||||    
T  44398019 aaaatattggtattggtccct 44398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 363
Target Start/End: Complemental strand, 35565485 - 35565382
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| ||| |||||        ||||||||||||||| || | |||||||||||    
T  35565485 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaat 35565386  T
Q  360 attg 363  Q
    ||||    
T  35565385 attg 35565382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 47982742 - 47982627
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| |||| |||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  47982742 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaat 47982643  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  47982642 attggtattggtccct 47982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 47992029 - 47991914
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| |||| |||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  47992029 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaat 47991930  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  47991929 attggtattggtccct 47991914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 48001316 - 48001201
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| |||| |||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  48001316 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaat 48001217  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  48001216 attggtattggtccct 48001201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 48010603 - 48010488
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| |||| |||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  48010603 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaat 48010504  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  48010503 attggtattggtccct 48010488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 3017251 - 3017357
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagtttt-atcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||||||||||||  |||| |||  ||||||||||||||||| |||||||||        ||||||||||||||| || | |||||||||||    
T  3017251 ggtttaaatatgtctttagtccttgcactttcgatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 3017350  T
Q  360 attggta 366  Q
    |||||||    
T  3017351 attggta 3017357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 33092032 - 33092149
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||||||||||||||  |||| ||| ||||| ||||||||||| |||||||||         ||||| |||||||||||| | |||||||||    
T  33092032 aaggtttaaatatgtctttagtccttgcactttcatcagtttttggcattggtccctacactttttttttgtttggaattggtccttgcactttgtaaaa 33092131  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  33092132 atattggtattggtccct 33092149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 47358568 - 47358455
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    ||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||    
T  47358568 gtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatat 47358469  T
Q  362 tggtaattgtccct 375  Q
    ||||| | ||||||    
T  47358468 tggtattggtccct 47358455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 40790807 - 40790922
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | ||||||||||    
T  40790807 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaa 40790905  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  40790906 tattggtattggtccct 40790922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 21561216 - 21561098
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    ||||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | ||||||||    
T  21561216 taaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaa 21561117  T
Q  357 aatattggtaattgtccct 375  Q
    |||||||||| | ||||||    
T  21561116 aatattggtattggtccct 21561098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 375
Target Start/End: Original strand, 16222471 - 16222588
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    |||||| ||||||||| |||||||| ||||| ||| |||| |||||||||||| |||||||||        ||||| ||||||||| || | ||||||||    
T  16222471 ataaggcttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaa 16222569  T
Q  357 aatattggtaattgtccct 375  Q
    |||||||||| | ||||||    
T  16222570 aatattggtattggtccct 16222588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 51753892 - 51754009
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||| |||||||||||||||  |||| ||| |||||||||||| |||| |||||||||        ||||| |||||| || || | |||||||||    
T  51753892 taaggttttaatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggcccctgcactttgtaaaa 51753991  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  51753992 atattggtattggtccct 51754009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 11692153 - 11692269
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||| ||||||||  |||| ||| ||||||||||| ||||| || ||||||        ||||| ||||||||| || | ||||||||||    
T  11692153 aaggtttaaatatgcctttagtccttgcactttcatcagattttgacattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaaa 11692252  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  11692253 tattggtattggtccct 11692269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 49665710 - 49665594
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||||||  ||||||||         ||||| ||||||||| || | ||||||||||    
T  49665710 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggcccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 49665611  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  49665610 tattggtattggtccct 49665594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 27957876 - 27957817
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||    
T  27957876 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctaca 27957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 29015718 - 29015832
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| || |||||||| ||||| |||||||||         |||| ||||||||| || | ||||||||||||    
T  29015718 ggtttaaatatgtctttagtccttgcactttcattagattttgacattggtccctacacttttttttatttgtaattggtccctgcactttgtaaaaata 29015817  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  29015818 ttggtattggtccct 29015832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 375
Target Start/End: Original strand, 21560791 - 21560912
Alignment:
Q  254 aatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgt 353  Q
    |||||| ||||||||| |||| ||| || || || |||||||| |||||||||||||||||| |||        |||||  |||||||| || | |||||    
T  21560791 aatatatggtttaaatgtgtcattattccctccacttttatcatattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgt 21560890  T
Q  354 aaaaatattggtaattgtccct 375  Q
    ||||||||||||| | ||||||    
T  21560891 aaaaatattggtattggtccct 21560912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 29352403 - 29352519
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||| |||| || ||||||||| ||| ||||||||||||||||| ||||| |||         |||||  ||||||||||| | ||||||||||    
T  29352403 aggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcactttttttttgtttggtattggtccttgcactttgtaaaaa 29352502  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  29352503 tattggtattggtccct 29352519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 54089838 - 54089894
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| | ||| |||||||||||||||||||||||||||    
T  54089838 aaggtttaaatgtgtcattggtccccgcacttttatcagattttggcattgatccct 54089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 366
Target Start/End: Complemental strand, 54803416 - 54803312
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    |||||||| |||| || ||| ||||| |||||||||||||||| |||||||||| |||        |||||  |||||||| || | |||||||||||||    
T  54803416 gtttaaatgtgtcattggtccctgcacttttatcagattttggtattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatat 54803317  T
Q  362 tggta 366  Q
    |||||    
T  54803316 tggta 54803312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 16731921 - 16731976
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||    
T  16731921 tttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctaca 16731976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 54090223 - 54090168
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||||||||||||||  |||| ||| || |||||||||||||| |||||    
T  54090223 aggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccct 54090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 38443699 - 38443593
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||  |||||||  |||| ||| |||||||||||| |||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  38443699 aaggtttaaatatgcatttagtcattgcactttcatcagattttggtattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 38443601  T
Q  359 tattggta 366  Q
    ||||||||    
T  38443600 tattggta 38443593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 44638677 - 44638620
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||||||    
T  44638677 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctaca 44638620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 3017587 - 3017531
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  3017587 aaggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccct 3017531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 1174 - 1288
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| |||||||||||||||||||||||||||        ||||||||||||||| || | ||||||||||||    
T  1174 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttgaaattggtccctgcactttgtaaaaata 1273  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  1274 ttggtattggtccct 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 1262 - 1371
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    |||||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||    
T  1262 ataaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaa 1361  T
Q  357 aatattggta 366  Q
    ||||||||||    
T  1362 aatattggta 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 375
Target Start/End: Complemental strand, 18707947 - 18707822
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagt 349  Q
    |||||| |||||||||||||||||||||||||  |||| ||| ||||||||||||||||| || ||||||        ||||| ||||| |||||| | |    
T  18707947 tataaaaataaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtctctacacttttttttgtttggaattgatccttgcact 18707848  T
Q  350 ttgtaaaaatattggtaattgtccct 375  Q
    ||||||||||||||||| | ||||||    
T  18707847 ttgtaaaaatattggtattggtccct 18707822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 32928130 - 32928013
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    ||||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||    
T  32928130 taaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 32928031  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  32928030 atattggtattggtccct 32928013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 970853 - 970737
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||        ||||||||||||||| || | ||||||||||    
T  970853 aaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 970754  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  970753 tattggtattggtccct 970737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 366
Target Start/End: Complemental strand, 3952326 - 3952222
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| ||| |||||        ||||||||||||||| || | |||||||||||||    
T  3952326 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaatat 3952227  T
Q  362 tggta 366  Q
    |||||    
T  3952226 tggta 3952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 9777383 - 9777280
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||||    
T  9777383 tttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatatt 9777284  T
Q  363 ggta 366  Q
    ||||    
T  9777283 ggta 9777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 18906927 - 18907038
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |  | |||||||||||||||    
T  18906927 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaatattg 18907026  T
Q  364 gtaattgtccct 375  Q
    ||| | ||||||    
T  18907027 gtattggtccct 18907038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 41186248 - 41186363
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||||||||| |||  |||| ||| ||||||||||||||||| || ||||||        ||||||||||||||| || | |||||||||||    
T  41186248 aggtttaaatatgtctttggtccatgcactttcatcagattttggcattggtctctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 41186347  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  41186348 attggtattggtccct 41186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 14102572 - 14102686
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||   | | ||||||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  14102572 ggtttaaatatgtctttagtcctcgaacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaata 14102671  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  14102672 ttggtattggtccct 14102686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 11108822 - 11108706
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| |||||||| ||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||  ||||||||| || | ||||||||||    
T  11108822 aaggcttaaatatatctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttagaattggtccctgcactttgtaaaaa 11108723  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  11108722 tattggtattggtccct 11108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 42435064 - 42435004
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||| ||||||||||| |||||||||||| ||| ||||||||||||||||| |||||||||    
T  42435064 aaggcttaaatatgtcattagtctctgcactttcatcagattttggcattggtccctacac 42435004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 34825685 - 34825740
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  34825685 ttaaatatgtctttagtctctgcactttcatcatattttggcattggtccctacac 34825740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 363
Target Start/End: Original strand, 40691395 - 40691498
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | |||||||||||    
T  40691395 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaat 40691494  T
Q  360 attg 363  Q
    ||||    
T  40691495 attg 40691498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 430574 - 430631
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  430574 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 32503978 - 32504094
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||||||||||  | || ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | ||||||||||    
T  32503978 aggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 32504077  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  32504078 tattggtattggtccct 32504094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 14827488 - 14827599
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtt 350  Q
    ||||||| |||||||||||||| ||||||||  |||| ||| |||||||||||| |||  |||||||||        ||||||||||||||| || | ||    
T  14827488 ataaataaaaggtttaaatatgcctttagtccttgcactttcatcagattttggtatttgtccctacacttttttttgtttgaaattggtccctgcactt 14827587  T
Q  351 tgtaaaaatatt 362  Q
    ||||||| ||||    
T  14827588 tgtaaaagtatt 14827599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 3963441 - 3963391
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcatt 308  Q
    ||||| |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  3963441 taaggcttaaatatgtctttagtccctgcactttcatcagattttggcatt 3963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 364
Target Start/End: Complemental strand, 5674405 - 5674303
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    |||||||||||||||||||   |||| |||||||||||||| |||||| |||||||||        ||||| |||||| || || | |||||||||||||    
T  5674405 gtttaaatatgtctttagttcttgcacttttatcagattttagcattggtccctacacttttttttgtttggaattggcccctgcactttgtaaaaatat 5674306  T
Q  362 tgg 364  Q
    |||    
T  5674305 tgg 5674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 4903013 - 4902897
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        ||||| ||||||||| || | ||||||||||    
T  4903013 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggaattggtccctgcactttgtaaaaa 4902914  T
Q  359 tattggtaattgtccct 375  Q
    ||| |||| | ||||||    
T  4902913 tatcggtattggtccct 4902897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 33850451 - 33850567
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||  || ||| ||||| ||| ||||||||||||||||||||||| |||        |||||  |||||||| || | ||||||||||    
T  33850451 aaggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 33850550  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  33850551 tattggtattggtccct 33850567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 40691707 - 40691583
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtt 350  Q
    |||||| | |||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  |||||||| || | ||    
T  40691707 ataaattttaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccatgcactt 40691608  T
Q  351 tgtaaaaatattggtaattgtccct 375  Q
    |||||||||||||||| | ||||||    
T  40691607 tgtaaaaatattggtattggtccct 40691583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 5673994 - 5674053
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||| |||| || ||| ||||| ||||||||||||||| ||||| |||||||||    
T  5673994 aggtttaaatgtgtcattggtccctgcacttttatcagattttgacattggtccctacac 5674053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 8031070 - 8031129
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||| ||||| ||| |||||    
T  8031070 aggtttaaatatgtctttagtccttgcactttcatcagattttgacattggtccatacac 8031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 25263763 - 25263704
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||  |||||||  |||| ||| ||||||||||||||||| |||||||||    
T  25263763 aggtttaaatatgcttttagtccttgcactttcatcagattttggcattggtccctacac 25263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 39060409 - 39060460
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||||||||||||||||| ||||| ||| |||||||||||| |||| |||||    
T  39060409 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccct 39060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 42813874 - 42813933
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||| |||||||  |||| ||| ||||||||||| ||||| |||||||||    
T  42813874 aggtttaaatatgtttttagtccttgcactttcatcagattttgacattggtccctacac 42813933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 32927710 - 32927764
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||||||||||||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  32927710 ggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccct 32927764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 2098680 - 2098624
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  2098680 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 2098624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 28625462 - 28625510
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcatt 308  Q
    ||||||||||||||||||| || ||||| ||| ||| ||||||||||||    
T  28625462 aggtttaaatatgtctttactccctgcactttcatcggattttggcatt 28625510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 366
Target Start/End: Complemental strand, 32487283 - 32487170
Alignment:
Q  253 aaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttg 352  Q
    ||||| |||||||||||||| |||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||    
T  32487283 aaataaaaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacacttatttttgtttggaattggtccctgcaatttg 32487184  T
Q  353 taaaaatattggta 366  Q
    ||||||||||||||    
T  32487183 taaaaatattggta 32487170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 28486619 - 28486734
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  28486619 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 28486718  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  28486719 attggtattggtccct 28486734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 47648271 - 47648156
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |||| |||||||||||    
T  47648271 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgtactttgtaaaaat 47648172  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  47648171 attggtattggtccct 47648156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 366
Target Start/End: Original strand, 5132425 - 5132531
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  5132425 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 5132524  T
Q  360 attggta 366  Q
    |||||||    
T  5132525 attggta 5132531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 25378677 - 25378742
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  25378677 tatatatataaggtttaaatatgtctttagtctttgcactttcatcagattttggcattggtccct 25378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 38019376 - 38019264
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    |||||||||||||||||||  |||| ||| ||||||||||| ||||| |||||||||        ||||||||||||||| || | ||||||||||||||    
T  38019376 tttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacacatttttttgtttgaaattggtccctgcactttgtaaaaatatt 38019277  T
Q  363 ggtaattgtccct 375  Q
    |||| | ||||||    
T  38019276 ggtattggtccct 38019264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 2937192 - 2937077
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  2937192 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 2937094  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  2937093 tattggtattggtccct 2937077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 36302843 - 36302736
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| ||||||||| |||||||| ||||| ||| ||||||||||||||||| | ||||||         ||||| |||||||||||||| ||||||||||    
T  36302843 aaggcttaaatatgcctttagtccctgcactttcatcagattttggcattggttcctacatttttttttgtttggaattggtccttgtactttgtaaaaa 36302744  T
Q  359 tattggta 366  Q
    ||||||||    
T  36302743 tattggta 36302736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 38872509 - 38872624
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  38872509 aggtttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 38872608  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  38872609 attggtattggtccct 38872624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 1342846 - 1342732
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  | || ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  1342846 ggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaata 1342747  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  1342746 ttggtattggtccct 1342732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 23253743 - 23253625
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    |||||||||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | ||||||||    
T  23253743 ataaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaa 23253644  T
Q  357 aatattggtaattgtccct 375  Q
    |||||||||| | ||||||    
T  23253643 aatattggtattggtccct 23253625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 40125208 - 40125138
Alignment:
Q  249 ttataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||| ||| |||||||||||||| |||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  40125208 ttatacataaaaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacac 40125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 28838100 - 28838215
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    |||||||||||| |||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||| | || | |||||||||||    
T  28838100 aggtttaaatatctctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggttcctgcactttgtaaaaat 28838199  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  28838200 attggtattggtccct 28838215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 44396456 - 44396397
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  44396456 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 44396397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 6782566 - 6782680
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||| ||| || | ||||||||||||    
T  6782566 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgatccctgcactttgtaaaaata 6782665  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  6782666 ttggtattggtccct 6782680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 45951318 - 45951204
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||| | ||||||||| |||| ||| ||||||||||||||||| | |||||||        ||||| ||||||||| || | ||||||||||||    
T  45951318 ggtttaaatacgcctttagtctttgcactttcatcagattttggcattggttcctacacttttttttgtttggaattggtccctgcactttgtaaaaata 45951219  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  45951218 ttggtattggtccct 45951204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 50756073 - 50755959
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | ||||||||||||    
T  50756073 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaaaata 50755974  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  50755973 ttggtattagtccct 50755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 2731123 - 2731006
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||| |||| |||||||||         ||||| ||||||||| || | |||||||||    
T  2731123 aaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctacactttttttttgtttggaattggtccctgcattttgtaaaa 2731024  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  2731023 atattggtattggtccct 2731006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 5905149 - 5905088
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||| |||||||  |||| ||| ||||||||||||||||| |||||||||    
T  5905149 taaggtttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacac 5905088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 39950229 - 39950290
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||||||||| | || ||| |||||||||||| |||| |||||||||    
T  39950229 taaggtttaaatatgtctttagtctttacactttcatcagattttggtattggtccctacac 39950290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 47672356 - 47672243
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    ||||||||||| ||||||||  |||| ||| |||||||||||| |||| |||||||||        ||||| ||||||||| || | |||||||||||||    
T  47672356 gtttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatat 47672257  T
Q  362 tggtaattgtccct 375  Q
    ||||| | ||||||    
T  47672256 tggtattggtccct 47672243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 1366301 - 1366417
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||         ||||| ||||||||| || | ||||||||||    
T  1366301 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 1366400  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  1366401 tattggtattggtccct 1366417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 36466347 - 36466235
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    |||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||| ||| |||| ||||||||||||||    
T  36466347 tttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattgatccctgtactttgtaaaaatatt 36466248  T
Q  363 ggtaattgtccct 375  Q
    |||| | ||||||    
T  36466247 ggtattggtccct 36466235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 30056927 - 30057042
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac-nnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||||||         |||||  ||||||||||| | |||||||||||    
T  30056927 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctacactttttttttgtttggcattggtccttgcactttgtaaaaat 30057026  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  30057027 attggtattggtccct 30057042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 366
Target Start/End: Original strand, 37350938 - 37351045
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||| ||||| ||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | ||||||||||    
T  37350938 aaggtttaaatatgcctttaatccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaa 37351037  T
Q  359 tattggta 366  Q
    ||||||||    
T  37351038 tattggta 37351045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 14556423 - 14556321
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    |||||||| ||||||||| ||||| ||| ||||||||||||||||  |||||||||        ||||| ||||| ||| || | |||||||||||||||    
T  14556423 ttaaatatatctttagtccctgcactttcatcagattttggcatttgtccctacacttttttttgtttggaattgatccctgcactttgtaaaaatattg 14556324  T
Q  364 gta 366  Q
    |||    
T  14556323 gta 14556321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 29721501 - 29721441
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||| |||||||||||| ||||| ||||| ||| ||||||||||||||||| | |||||||    
T  29721501 aaggcttaaatatgtctctagtccctgcactttcatcagattttggcattggttcctacac 29721441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 14556018 - 14556129
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatatt 362  Q
    ||||||| |||| || ||| ||||| ||| ||||||||||| ||||||||||| |||        |||||  ||||||||||||| ||||||||||||||    
T  14556018 tttaaatgtgtcattggtccctgcactttcatcagattttgacattgatccctgcacttttttt-gtttggcattggtccttgtactttgtaaaaatatt 14556116  T
Q  363 ggtaattgtccct 375  Q
    |||| | ||||||    
T  14556117 ggtattggtccct 14556129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 29548581 - 29548636
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatcccta 316  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||    
T  29548581 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtcccta 29548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 30057342 - 30057287
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||    
T  30057342 aggtttaaatatgcctttagtcattgcactttcatcagattttggcattggtccct 30057287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 32005466 - 32005568
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||||||||||| || || ||| |||||||||| |||||| ||| |||||        ||||||||||||||| || | ||||||||||    
T  32005466 aaggtttaaatatgtctttagtc-cttcactttcatcagattttagcattggtccttacac-tttttttgtttgaaattggtccctgcactttgtaaaaa 32005563  T
Q  359 tattg 363  Q
    |||||    
T  32005564 tattg 32005568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 44519339 - 44519394
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    |||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||    
T  44519339 aggtttaaatgtgtcattggtctctgcattttcatcagattttggcattggtccct 44519394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 44519753 - 44519694
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||| ||  |||| ||| |||||||||||| |||| |||||||||    
T  44519753 aggtttaaatatgtctttaatccttgcactttcatcagattttggtattggtccctacac 44519694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 49628506 - 49628447
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||| |||||||||  |||| ||| || |||||||||||||| |||||||||    
T  49628506 aggtttaaatatctctttagtccttgcactttcattagattttggcattggtccctacac 49628447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 32486859 - 32486913
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||| |||| |||||| ||||| ||| ||||||||||||||||| |||||    
T  32486859 ggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccct 32486913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 17077740 - 17077684
Alignment:
Q  263 tttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||| ||||||||  |||| ||| ||||||||||| ||||| |||||||||    
T  17077740 tttaaatatgcctttagtccttgcactttcatcagattttgacattggtccctacac 17077684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 5214265 - 5214380
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  5214265 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 5214364  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  5214365 attggtattggtccct 5214380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 366
Target Start/End: Original strand, 11062346 - 11062453
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  11062346 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 11062445  T
Q  359 tattggta 366  Q
    ||||||||    
T  11062446 tattggta 11062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 18036219 - 18036333
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||| ||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||||||||||||| || | ||||||||||||    
T  18036219 ggtttaaaaatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaata 18036318  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  18036319 ttggtattggtccct 18036333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 17965063 - 17964948
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||| ||||||| ||||||||  |||| ||||||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||    
T  17965063 aggttaaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaat 17964964  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  17964963 attggtattggtccct 17964948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 26409047 - 26408936
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatattg 363  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||||    
T  26409047 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 26408948  T
Q  364 gtaattgtccct 375  Q
    ||| | ||||||    
T  26408947 gtattggtccct 26408936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 4717228 - 4717168
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||| ||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||    
T  4717228 aaggcttaaatatgcctttagtccctgcactttcatcagattttggcattgatccctacac 4717168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 15440517 - 15440625
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||| |||| |||||||||        |||||||||| || | || | |||||||||    
T  15440517 taaggtttaaatatgtatttagtccttgcacttttatcagattttggtattggtccctacacttttttttgtttgaaatttgttcctgcactttgtaaaa 15440616  T
Q  358 atattggta 366  Q
    |||||||||    
T  15440617 atattggta 15440625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 20166052 - 20166176
Alignment:
Q  251 ataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtt 350  Q
    |||| ||| ||||||||||||| |||||||   |||| ||| |||||||||||||||||||||||||||        ||||| |||| |||| || | ||    
T  20166052 ataattattaggtttaaatatgcctttagttcttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattagtccatgcactt 20166151  T
Q  351 tgtaaaaatattggtaattgtccct 375  Q
    |||||||||||||||| | ||||||    
T  20166152 tgtaaaaatattggtattagtccct 20166176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 25945742 - 25945626
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||| | ||||||||  |||| ||| ||||||||||||||||| |||||| ||        ||||| |||||||||||| | ||||||||||    
T  25945742 aaggtttaaatacgcctttagtccttgcactttcatcagattttggcattggtccctatacttttttttgtttggaattggtccttgcactttgtaaaaa 25945643  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  25945642 tattggtattggtccct 25945626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 30491891 - 30491951
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||  |||| |||||||||||||| |||||| |||||||||    
T  30491891 aaggtttaaatatgtctttagtccttgcacttttatcagatttttgcattggtccctacac 30491951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 38245156 - 38245040
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||| ||||||||  |||| ||| ||||||||||||||||| ||| |||||        ||||| ||||||||| || | ||||||||||    
T  38245156 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactttgtaaaaa 38245057  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  38245056 tattggtattggtccct 38245040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 363
Target Start/End: Complemental strand, 2268668 - 2268565
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||| |||| |||||||||        ||||| ||||| |||||| | |||||||||||    
T  2268668 aggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattgatccttgcactttgtaaaaat 2268569  T
Q  360 attg 363  Q
    ||||    
T  2268568 attg 2268565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 3578002 - 3578057
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  3578002 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacac 3578057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 22619846 - 22619788
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  22619846 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 22619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 34929537 - 34929595
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||| ||||||||||||||    
T  34929537 aggtttaaatatgtctttagtccttgcactttcatcagattttgacattgatccctaca 34929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 39412152 - 39412266
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    ||||||||||||| |||||||  |||| ||| ||||||||||| ||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  39412152 ggtttaaatatgtatttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaata 39412251  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  39412252 ttggtattggtccct 39412266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 23910713 - 23910608
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||| ||||||||    
T  23910713 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttataaaaata 23910614  T
Q  361 ttggta 366  Q
    ||||||    
T  23910613 ttggta 23910608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 8343043 - 8343099
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| ||||||||    
T  8343043 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca 8343099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 4621085 - 4620978
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||||||  |||||||  |||| ||| ||||||||||||||||| ||||||||         ||||| ||||||||| || | ||||||||||    
T  4621085 aaggtttaaatatgcttttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccatgcactttgtaaaaa 4620986  T
Q  359 tattggta 366  Q
    ||||||||    
T  4620985 tattggta 4620978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 8145085 - 8145030
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatcccta 316  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| ||||||    
T  8145085 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccta 8145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 974236 - 974182
Alignment:
Q  264 ttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||||||||||| ||||| ||| |||||||||||| |||| ||||||||    
T  974236 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccctaca 974182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 22619447 - 22619561
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    ||||||||| |||| || ||||||||| ||| ||||||||||||||||| ||||| |||        |||||  |||||||| || | ||||||||||||    
T  22619447 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattgttccctgcacttttttttgtttggcattggtccctgcactttgtaaaaata 22619546  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  22619547 ttggtattggtccct 22619561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 375
Target Start/End: Complemental strand, 39412540 - 39412418
Alignment:
Q  253 aaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttg 352  Q
    |||| |||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  ||| |||| |||| ||||    
T  39412540 aaatttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcatttgtccctgtactttg 39412441  T
Q  353 taaaaatattggtaattgtccct 375  Q
    |||||||||||||| | ||||||    
T  39412440 taaaaatattggtattggtccct 39412418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 8144670 - 8144787
Alignment:
Q  258 taaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaa 357  Q
    |||||||||||| |||  || |||| |||| ||||||||||||||||||||| ||||| |||        |||||  |||||||| || | |||||||||    
T  8144670 taaggtttaaatgtgttattggtctatgcacttttatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 8144769  T
Q  358 atattggtaattgtccct 375  Q
    ||||||||| | ||||||    
T  8144770 atattggtattggtccct 8144787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 18674261 - 18674156
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| |||||||          ||||| ||||||||| || | ||||||||||||    
T  18674261 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacttttttttttgtttggaattggtccctgcactttgtaaaaata 18674162  T
Q  361 ttggta 366  Q
    ||||||    
T  18674161 ttggta 18674156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 2268225 - 2268281
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| |||||| ||||| ||| ||||||||||||||||| |||||    
T  2268225 aaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccct 2268281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 16968712 - 16968772
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||  |||||||| | || ||||||||||||||| ||||| |||||||||    
T  16968712 aaggtttaaatatgcttttagtctttacacttttatcagattttgacattggtccctacac 16968772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 23910293 - 23910409
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||| ||||| |||||||||        |||||  |||||||| || | ||||||||||    
T  23910293 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggcattggtccctgcactttgtaaaaa 23910392  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  23910393 tattggtattggtccct 23910409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 18705909 - 18705802
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||||||||||||||||||||||| |||| ||| |||| ||||||| |||| ||  || ||        ||||| ||||||||| || | ||||||||||    
T  18705909 aaggtttaaatatgtctttagtctttgcactttcatcaaattttggtattggtcgttatacttttttttgtttggaattggtccctgcactttgtaaaaa 18705810  T
Q  359 tattggta 366  Q
    ||||||||    
T  18705809 tattggta 18705802  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 27858380 - 27858442
Alignment:
Q  253 aaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||| ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  27858380 aaataaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 27858442  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 2033738 - 2033795
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    |||||||||||| ||||||||  |||| ||| ||||||||||||||||| | ||||||    
T  2033738 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggttcctaca 2033795  T

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Target: scaffold0044 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 9953 - 9835
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    |||||||||||||||| ||||| ||  |||| ||||||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||    
T  9953 ataaggtttaaatatgcctttaatccttgcacttttatcagattttggcattggtccctacaccattttttgtttggaattggtccctgcactttgtaaa 9854  T
Q  357 aatattggtaattgtccct 375  Q
    |||||||||| | ||||||    
T  9853 aatattggtattggtccct 9835  T

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Target: scaffold0015 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 50133 - 50015
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaa 356  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| |  | ||||||||    
T  50133 ataaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccatacactttgtaaa 50034  T
Q  357 aatattggtaattgtccct 375  Q
    |||||||||| | ||||||    
T  50033 aatattggtattggtccct 50015  T

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Target: scaffold0170 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 5510 - 5623
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaatat 361  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | |||||||||||||    
T  5510 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatat 5609  T
Q  362 tggtaattgtccct 375  Q
    ||||| | ||||||    
T  5610 tggtattggtccct 5623  T

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Target: scaffold0170; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 5870 - 5814
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccct 315  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||| |||||    
T  5870 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 5814  T

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Target: scaffold0302 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 14539 - 14424
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaat 359  Q
    ||||||||||||| ||||||||  |||| ||| |||||||||||| |||| |||||||||        ||||||||||||||| || | |||||||||||    
T  14539 aggtttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaat 14440  T
Q  360 attggtaattgtccct 375  Q
    ||||||| | ||||||    
T  14439 attggtattggtccct 14424  T

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Target: scaffold0302; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 14114 - 14239
Alignment:
Q  250 tataaatataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagt 349  Q
    |||||||| | ||||||||| |||| || ||| ||||| ||| ||||||||||||||||| ||||| |||        |||||  |||||||| || | |    
T  14114 tataaataaatggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcact 14213  T
Q  350 ttgtaaaaatattggtaattgtccct 375  Q
    ||||||||||||||||| | ||||||    
T  14214 ttgtaaaaatattggtattggtccct 14239  T

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Target: scaffold1095 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 84 - 22
Alignment:
Q  257 ataaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    |||||||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||    
T  84 ataaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 22  T

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Target: scaffold0651 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 6440 - 6327
Alignment:
Q  261 ggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaata 360  Q
    |||||||||||||||||||||  |||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||||    
T  6440 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaata 6342  T
Q  361 ttggtaattgtccct 375  Q
    |||||| | ||||||    
T  6341 ttggtattggtccct 6327  T

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Target: scaffold0651; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 6028 - 6143
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||||||        ||||| ||||||||| || | ||||||||||    
T  6028 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 6126  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  6127 tattggtattggtccct 6143  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 35754 - 35638
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    ||||||||||| |||| || ||| ||||| ||| ||||||||||||||||||||||| |||        |||||| |||||||| || | ||||||||||    
T  35754 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttgacattggtccctgcactttgtaaaaa 35655  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  35654 tattggtattggtccct 35638  T

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Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 35333 - 35392
Alignment:
Q  260 aggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacac 319  Q
    ||||||||||||||||||| ||  |||| ||| ||||||||||||||||| || ||||||    
T  35333 aggtttaaatatgtctttaatccttgcactttcatcagattttggcattggtcactacac 35392  T

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Target: scaffold0385 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 12966 - 13081
Alignment:
Q  259 aaggtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctacacnnnnnnnngtttgaaattggtccttgtagtttgtaaaaa 358  Q
    |||| ||||||||| |||||||| ||||| ||| |||| |||||||||||| |||||||||        ||||| ||||||||| || ||||||||||||    
T  12966 aaggcttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcagtttgtaaaaa 13064  T
Q  359 tattggtaattgtccct 375  Q
    |||||||| | ||||||    
T  13065 tattggtattggtccct 13081  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 16837 - 16893
Alignment:
Q  262 gtttaaatatgtctttagtctctgcagttttatcagattttggcattgatccctaca 318  Q
    ||||||||||||||||||||  | || ||||||||||||||| ||||| || |||||    
T  16837 gtttaaatatgtctttagtccttacacttttatcagattttgacattggtctctaca 16893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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