View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10056_low_22 (Length: 298)
Name: NF10056_low_22
Description: NF10056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10056_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 20 - 287
Target Start/End: Original strand, 7597647 - 7597915
Alignment:
| Q |
20 |
caatctacagtgcacgtgctttagatgcaacctcgtacggccatacaaagttatttttgtctagcacggctatataaattcacactctttaataaaaata |
119 |
Q |
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| T |
7597647 |
caatctacagtgcacgtgctttagatgcaacctcgtacggccatacaaagttatttttgtctagcacggctatataaattcacactctttaataaaaata |
7597746 |
T |
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| Q |
120 |
ttcttctaaatatgaatatggagatggtaaaggtgaacatagtgtaaatgtttttaagtaaagactttaccatctcag-aaaaaattcacacttttgtca |
218 |
Q |
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|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
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| T |
7597747 |
ttctcctaaatatggatatggagatggtaaaggtgaacatagtgtaaatgtttttaagtaaagactttaccatctcagaaaaaaattcacacctttgtca |
7597846 |
T |
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| Q |
219 |
attaacaaaactcgcatctattcacctaaaggatatgaacccaatcattttgaaggcctttccattcat |
287 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7597847 |
attaacaaaactcacatctattcacctaaaggatatgaacccaatcattttgaaggcctttccgttcat |
7597915 |
T |
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