View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10056_low_38 (Length: 205)

Name: NF10056_low_38
Description: NF10056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10056_low_38
NF10056_low_38
[»] chr4 (60 HSPs)
chr4 (9-187)||(53345219-53345397)
chr4 (1-81)||(36994518-36994598)
chr4 (12-114)||(48142439-48142541)
chr4 (12-81)||(379385-379454)
chr4 (1-81)||(26175730-26175810)
chr4 (1-130)||(54883014-54883142)
chr4 (21-85)||(4587973-4588037)
chr4 (21-85)||(6542269-6542333)
chr4 (1-153)||(6655950-6656101)
chr4 (1-85)||(37229812-37229896)
chr4 (1-156)||(5207862-5208016)
chr4 (27-130)||(12119559-12119662)
chr4 (33-152)||(26699466-26699585)
chr4 (1-78)||(55085462-55085538)
chr4 (1-81)||(27417059-27417139)
chr4 (1-81)||(34570508-34570588)
chr4 (1-81)||(46703494-46703574)
chr4 (1-81)||(54200000-54200080)
chr4 (1-85)||(56178727-56178811)
chr4 (1-80)||(40632439-40632518)
chr4 (21-85)||(48143058-48143121)
chr4 (3-81)||(9927552-9927630)
chr4 (1-79)||(26364230-26364308)
chr4 (1-88)||(29056352-29056439)
chr4 (12-81)||(2209718-2209787)
chr4 (12-79)||(21688253-21688321)
chr4 (1-78)||(47038507-47038583)
chr4 (12-81)||(50262795-50262864)
chr4 (1-81)||(5429673-5429753)
chr4 (1-81)||(8665402-8665482)
chr4 (1-81)||(36463483-36463563)
chr4 (12-79)||(50673943-50674009)
chr4 (12-79)||(12073397-12073464)
chr4 (13-85)||(32091485-32091556)
chr4 (1-79)||(48893734-48893816)
chr4 (1-79)||(31474144-31474223)
chr4 (1-79)||(35662435-35662513)
chr4 (26-81)||(52467448-52467502)
chr4 (1-81)||(5871814-5871894)
chr4 (1-81)||(12739644-12739724)
chr4 (1-81)||(12745530-12745610)
chr4 (1-81)||(12747850-12747930)
chr4 (26-79)||(24969132-24969184)
chr4 (13-81)||(41639432-41639500)
chr4 (11-113)||(44570428-44570528)
chr4 (26-79)||(46147487-46147539)
chr4 (1-81)||(52082751-52082831)
chr4 (1-81)||(52095456-52095536)
chr4 (1-85)||(29999897-29999980)
chr4 (21-81)||(37740640-37740699)
chr4 (26-81)||(41964435-41964489)
chr4 (20-85)||(6677481-6677547)
chr4 (37-120)||(22882806-22882889)
chr4 (37-120)||(22934470-22934553)
chr4 (16-85)||(16422697-16422765)
chr4 (11-121)||(21703890-21704000)
chr4 (13-81)||(41639269-41639337)
chr4 (11-80)||(44967924-44967993)
chr4 (26-85)||(5370173-5370232)
chr4 (21-85)||(13992382-13992445)
[»] chr6 (31 HSPs)
chr6 (8-130)||(4045424-4045546)
chr6 (1-81)||(3808803-3808883)
chr6 (1-79)||(17762984-17763062)
chr6 (1-81)||(2973033-2973113)
chr6 (1-81)||(21588925-21589005)
chr6 (1-81)||(21593658-21593738)
chr6 (12-79)||(5043632-5043699)
chr6 (1-85)||(5406290-5406373)
chr6 (1-85)||(5410615-5410698)
chr6 (12-81)||(17758028-17758097)
chr6 (1-81)||(9183125-9183205)
chr6 (12-80)||(16569038-16569107)
chr6 (12-85)||(31404765-31404837)
chr6 (1-153)||(28137431-28137582)
chr6 (12-79)||(26954382-26954448)
chr6 (1-81)||(3038997-3039077)
chr6 (1-84)||(2171622-2171705)
chr6 (1-85)||(5413484-5413567)
chr6 (26-81)||(22424921-22424975)
chr6 (12-120)||(25073574-25073681)
chr6 (43-81)||(603182-603220)
chr6 (12-85)||(3072851-3072923)
chr6 (1-77)||(33211283-33211359)
chr6 (26-78)||(26830220-26830271)
chr6 (21-85)||(30834626-30834689)
chr6 (21-84)||(16452420-16452482)
chr6 (12-85)||(6097531-6097603)
chr6 (12-80)||(16554874-16554941)
chr6 (12-75)||(16567201-16567265)
chr6 (12-80)||(16631430-16631497)
chr6 (12-80)||(27647866-27647933)
[»] chr2 (39 HSPs)
chr2 (12-130)||(33648176-33648294)
chr2 (26-130)||(24398076-24398180)
chr2 (1-80)||(13121763-13121842)
chr2 (44-156)||(17490168-17490279)
chr2 (12-85)||(26353189-26353262)
chr2 (1-81)||(38312234-38312314)
chr2 (21-85)||(6595096-6595159)
chr2 (1-153)||(36318032-36318183)
chr2 (12-81)||(34139865-34139934)
chr2 (12-81)||(42288204-42288273)
chr2 (12-85)||(42261576-42261648)
chr2 (1-85)||(7815363-7815447)
chr2 (26-81)||(33162544-33162598)
chr2 (12-81)||(11690506-11690575)
chr2 (12-81)||(42362357-42362426)
chr2 (3-80)||(45726925-45727002)
chr2 (1-81)||(35446978-35447058)
chr2 (1-85)||(5723346-5723429)
chr2 (26-81)||(723838-723892)
chr2 (18-85)||(4484421-4484487)
chr2 (1-85)||(4503222-4503307)
chr2 (20-86)||(11049563-11049632)
chr2 (15-81)||(24885669-24885735)
chr2 (1-79)||(36773556-36773634)
chr2 (1-81)||(1631826-1631906)
chr2 (1-85)||(2334508-2334592)
chr2 (1-81)||(11151685-11151765)
chr2 (1-81)||(29867863-29867943)
chr2 (1-85)||(36205754-36205838)
chr2 (12-80)||(6266696-6266764)
chr2 (12-79)||(14202501-14202568)
chr2 (16-88)||(34811309-34811380)
chr2 (21-85)||(36988166-36988229)
chr2 (26-81)||(14633920-14633974)
chr2 (18-85)||(30833357-30833423)
chr2 (28-81)||(18674360-18674411)
chr2 (12-85)||(30218135-30218207)
chr2 (20-85)||(32289577-32289641)
chr2 (21-85)||(45099770-45099833)
[»] chr7 (56 HSPs)
chr7 (8-156)||(36574536-36574682)
chr7 (21-120)||(4253584-4253683)
chr7 (2-84)||(23343970-23344052)
chr7 (26-166)||(23565071-23565210)
chr7 (1-81)||(22269967-22270047)
chr7 (1-81)||(30024826-30024906)
chr7 (1-81)||(47674037-47674117)
chr7 (1-79)||(2361068-2361146)
chr7 (12-81)||(1113662-1113731)
chr7 (1-81)||(8359411-8359491)
chr7 (1-81)||(26417310-26417390)
chr7 (1-81)||(31733063-31733143)
chr7 (1-81)||(47676230-47676310)
chr7 (1-81)||(48491573-48491653)
chr7 (21-85)||(23555055-23555118)
chr7 (12-79)||(29608742-29608809)
chr7 (26-81)||(2390302-2390356)
chr7 (1-79)||(48599430-48599508)
chr7 (12-81)||(4508800-4508869)
chr7 (1-81)||(4586155-4586235)
chr7 (13-81)||(6431977-6432045)
chr7 (28-85)||(22328481-22328538)
chr7 (1-81)||(27347811-27347891)
chr7 (20-85)||(43363564-43363628)
chr7 (26-81)||(4510642-4510696)
chr7 (26-81)||(4512484-4512538)
chr7 (1-79)||(31518789-31518867)
chr7 (1-79)||(34310812-34310890)
chr7 (12-81)||(496077-496146)
chr7 (11-85)||(3904707-3904781)
chr7 (1-71)||(5514113-5514183)
chr7 (12-81)||(31105487-31105556)
chr7 (1-78)||(41317531-41317608)
chr7 (13-81)||(12097953-12098021)
chr7 (1-81)||(18126638-18126718)
chr7 (1-85)||(35853908-35853992)
chr7 (1-73)||(36146509-36146582)
chr7 (1-81)||(48489425-48489505)
chr7 (1-153)||(14379884-14380035)
chr7 (1-85)||(29991048-29991131)
chr7 (12-79)||(38671318-38671385)
chr7 (1-79)||(3258989-3259067)
chr7 (1-79)||(8153336-8153414)
chr7 (1-79)||(24525992-24526071)
chr7 (46-81)||(32358148-32358183)
chr7 (26-81)||(43864264-43864318)
chr7 (12-81)||(25615858-25615927)
chr7 (11-85)||(26639325-26639398)
chr7 (43-88)||(2759284-2759329)
chr7 (1-85)||(4178768-4178852)
chr7 (1-81)||(14069927-14070007)
chr7 (28-85)||(19502200-19502256)
chr7 (12-85)||(43504246-43504318)
chr7 (12-80)||(20343902-20343969)
chr7 (21-81)||(25767055-25767114)
chr7 (25-81)||(41649105-41649159)
[»] chr5 (37 HSPs)
chr5 (13-152)||(316769-316907)
chr5 (8-120)||(13695746-13695858)
chr5 (1-81)||(27637707-27637787)
chr5 (1-81)||(28278310-28278390)
chr5 (12-81)||(538030-538099)
chr5 (12-81)||(3075752-3075821)
chr5 (12-81)||(38747010-38747079)
chr5 (1-81)||(213459-213539)
chr5 (1-81)||(533763-533843)
chr5 (12-153)||(8565969-8566109)
chr5 (1-85)||(25412755-25412838)
chr5 (1-79)||(40147255-40147333)
chr5 (12-81)||(39468643-39468712)
chr5 (1-85)||(13239745-13239829)
chr5 (13-81)||(13488209-13488277)
chr5 (1-85)||(30182582-30182666)
chr5 (1-81)||(42426329-42426409)
chr5 (1-81)||(42428524-42428604)
chr5 (37-85)||(30802858-30802906)
chr5 (26-81)||(16452100-16452154)
chr5 (42-85)||(30683014-30683057)
chr5 (26-81)||(33831700-33831754)
chr5 (12-81)||(5887510-5887579)
chr5 (12-85)||(42310025-42310098)
chr5 (20-85)||(9049432-9049496)
chr5 (1-73)||(16641039-16641114)
chr5 (12-80)||(29720369-29720437)
chr5 (12-80)||(29722529-29722597)
chr5 (12-80)||(29751255-29751323)
chr5 (3-81)||(32636820-32636898)
chr5 (12-85)||(9789315-9789387)
chr5 (12-85)||(16409480-16409552)
chr5 (20-85)||(26177895-26177959)
chr5 (52-154)||(33906052-33906154)
chr5 (11-113)||(35616174-35616275)
chr5 (21-85)||(13343076-13343139)
chr5 (12-80)||(22536385-22536452)
[»] chr3 (56 HSPs)
chr3 (18-88)||(5433963-5434033)
chr3 (10-121)||(54739008-54739118)
chr3 (1-81)||(46860468-46860548)
chr3 (12-79)||(32891108-32891176)
chr3 (1-153)||(45095158-45095308)
chr3 (11-85)||(37761560-37761634)
chr3 (12-81)||(49199564-49199633)
chr3 (1-80)||(40735377-40735456)
chr3 (1-79)||(40734492-40734570)
chr3 (1-79)||(43401898-43401976)
chr3 (1-81)||(5236550-5236630)
chr3 (12-80)||(30236130-30236198)
chr3 (3-79)||(34491208-34491284)
chr3 (1-80)||(44700573-44700652)
chr3 (25-81)||(46173376-46173431)
chr3 (21-88)||(5373247-5373314)
chr3 (3-85)||(7762261-7762343)
chr3 (18-85)||(9636216-9636282)
chr3 (20-79)||(28253363-28253422)
chr3 (1-79)||(31340297-31340375)
chr3 (12-81)||(22835096-22835165)
chr3 (12-81)||(31314450-31314519)
chr3 (12-81)||(47304256-47304325)
chr3 (1-81)||(29196480-29196561)
chr3 (1-81)||(54593698-54593778)
chr3 (11-120)||(1313860-1313969)
chr3 (11-87)||(33191836-33191912)
chr3 (26-81)||(29813083-29813137)
chr3 (1-79)||(43403841-43403919)
chr3 (12-81)||(760852-760921)
chr3 (26-88)||(9666553-9666615)
chr3 (12-85)||(19683979-19684052)
chr3 (1-78)||(44331539-44331616)
chr3 (20-85)||(7764478-7764542)
chr3 (12-79)||(32744532-32744598)
chr3 (1-85)||(37408452-37408536)
chr3 (1-81)||(41819617-41819697)
chr3 (13-77)||(1683483-1683546)
chr3 (12-79)||(4569957-4570024)
chr3 (21-85)||(5258234-5258297)
chr3 (21-85)||(5260413-5260476)
chr3 (21-85)||(23200228-23200291)
chr3 (12-79)||(39153457-39153524)
chr3 (26-81)||(9581302-9581356)
chr3 (3-81)||(23392003-23392081)
chr3 (11-119)||(35138762-35138869)
chr3 (1-79)||(36018846-36018924)
chr3 (1-79)||(53921599-53921677)
chr3 (12-81)||(29682364-29682433)
chr3 (43-81)||(29810904-29810942)
chr3 (12-85)||(801096-801168)
chr3 (26-79)||(51398834-51398886)
chr3 (12-80)||(6716505-6716572)
chr3 (12-80)||(7780099-7780166)
chr3 (21-85)||(23198029-23198092)
chr3 (12-80)||(54635130-54635197)
[»] chr8 (51 HSPs)
chr8 (1-81)||(18655394-18655474)
chr8 (1-88)||(1822286-1822373)
chr8 (1-88)||(1856731-1856818)
chr8 (1-81)||(19491793-19491873)
chr8 (1-79)||(30291600-30291679)
chr8 (1-81)||(27811272-27811352)
chr8 (12-79)||(1292559-1292626)
chr8 (1-88)||(8965778-8965865)
chr8 (21-153)||(12702657-12702787)
chr8 (26-81)||(40221765-40221819)
chr8 (11-130)||(11712046-11712165)
chr8 (1-78)||(43036417-43036494)
chr8 (1-81)||(4283518-4283598)
chr8 (1-81)||(4731652-4731732)
chr8 (1-81)||(15212780-15212860)
chr8 (1-81)||(18141815-18141894)
chr8 (13-81)||(30143346-30143414)
chr8 (1-81)||(42435085-42435165)
chr8 (12-79)||(40328784-40328851)
chr8 (21-85)||(42498209-42498272)
chr8 (1-153)||(34256530-34256680)
chr8 (11-85)||(41266973-41267047)
chr8 (12-88)||(10930286-10930362)
chr8 (1-81)||(33352144-33352224)
chr8 (12-79)||(3303766-3303833)
chr8 (28-80)||(10240175-10240227)
chr8 (21-85)||(31218272-31218335)
chr8 (1-85)||(34254421-34254504)
chr8 (12-79)||(44353798-44353865)
chr8 (1-79)||(3772186-3772264)
chr8 (12-81)||(1345465-1345534)
chr8 (11-85)||(3231886-3231960)
chr8 (12-81)||(6598977-6599046)
chr8 (12-81)||(6674430-6674499)
chr8 (26-84)||(10929819-10929876)
chr8 (12-81)||(40321085-40321154)
chr8 (1-81)||(9765739-9765819)
chr8 (26-79)||(11384005-11384057)
chr8 (21-85)||(1746308-1746371)
chr8 (12-79)||(41364943-41365010)
chr8 (21-85)||(44303870-44303933)
chr8 (26-81)||(5689291-5689345)
chr8 (11-41)||(12632818-12632848)
chr8 (21-77)||(28470878-28470935)
chr8 (12-80)||(41366709-41366777)
chr8 (1-41)||(8153758-8153798)
chr8 (39-79)||(10015113-10015153)
chr8 (21-85)||(17982668-17982731)
chr8 (43-79)||(18106174-18106210)
chr8 (12-80)||(25689960-25690027)
chr8 (11-79)||(29796418-29796486)
[»] chr1 (60 HSPs)
chr1 (11-130)||(22079321-22079439)
chr1 (1-81)||(41360908-41360988)
chr1 (21-85)||(928066-928130)
chr1 (1-81)||(3156859-3156939)
chr1 (21-159)||(3460710-3460847)
chr1 (1-81)||(4552731-4552811)
chr1 (1-81)||(11348692-11348772)
chr1 (1-81)||(49918344-49918424)
chr1 (1-85)||(37282782-37282865)
chr1 (1-80)||(37879006-37879085)
chr1 (1-79)||(10925217-10925295)
chr1 (1-79)||(44455154-44455232)
chr1 (1-80)||(19754488-19754568)
chr1 (1-78)||(37033170-37033247)
chr1 (20-85)||(8871138-8871203)
chr1 (1-81)||(13547183-13547263)
chr1 (1-81)||(28265648-28265728)
chr1 (1-81)||(29136241-29136321)
chr1 (1-81)||(34603570-34603650)
chr1 (1-81)||(37168291-37168371)
chr1 (1-81)||(47115165-47115245)
chr1 (1-81)||(47255434-47255514)
chr1 (1-79)||(193605-193683)
chr1 (44-136)||(2263014-2263106)
chr1 (1-79)||(42298071-42298149)
chr1 (1-75)||(45644454-45644529)
chr1 (12-81)||(834261-834330)
chr1 (1-156)||(44650182-44650337)
chr1 (1-81)||(7482325-7482405)
chr1 (1-81)||(13549094-13549174)
chr1 (1-80)||(19752679-19752759)
chr1 (1-81)||(31659232-31659312)
chr1 (12-79)||(197004-197071)
chr1 (12-79)||(8550883-8550950)
chr1 (1-80)||(37503649-37503728)
chr1 (1-85)||(20762665-20762750)
chr1 (26-81)||(28220320-28220374)
chr1 (43-81)||(13138070-13138108)
chr1 (37-79)||(15820337-15820379)
chr1 (26-153)||(31925730-31925855)
chr1 (26-79)||(23555361-23555413)
chr1 (1-81)||(28223515-28223595)
chr1 (1-78)||(44646881-44646958)
chr1 (21-85)||(13316442-13316505)
chr1 (12-79)||(36683695-36683762)
chr1 (12-80)||(40282382-40282450)
chr1 (12-79)||(46064923-46064990)
chr1 (21-153)||(3189345-3189475)
chr1 (21-153)||(3198162-3198292)
chr1 (21-153)||(3207001-3207131)
chr1 (26-80)||(35109494-35109546)
chr1 (1-79)||(50169306-50169384)
chr1 (12-130)||(13659382-13659499)
chr1 (1-81)||(37559962-37560043)
chr1 (12-85)||(9109510-9109582)
chr1 (1-81)||(50167269-50167349)
chr1 (37-130)||(6808482-6808575)
chr1 (12-80)||(9036422-9036489)
chr1 (12-80)||(20622334-20622401)
chr1 (15-79)||(25652095-25652158)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-81)||(7321-7401)
[»] scaffold0002 (2 HSPs)
scaffold0002 (12-85)||(490411-490483)
scaffold0002 (21-85)||(434548-434611)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-81)||(80377-80446)
[»] scaffold0491 (2 HSPs)
scaffold0491 (18-85)||(11252-11318)
scaffold0491 (18-85)||(8826-8892)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-79)||(18099-18177)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-85)||(114596-114680)
[»] scaffold1519 (1 HSPs)
scaffold1519 (21-85)||(931-994)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-79)||(11551-11629)
[»] scaffold0066 (1 HSPs)
scaffold0066 (3-81)||(20509-20587)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-130)||(149143-149260)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-113)||(25067-25159)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 6e-70; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 53345219 - 53345397
Alignment:
Q  9 ggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcat 108  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  53345219 ggagagattgagaaaatgatagaaattaaggttgattctttgtgagcttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaactcat 53345318  T
Q  109 tgatattggattgtagggatcagtcttttacctagagtaggtcaatttagattgaactagcacacatttcttgatgtct 187  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||    
T  53345319 taatattggattgtagggatcagtcttttacttagagtaggtcaatttggactgaactagcacacatttcttgatgtct 53345397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36994518 - 36994598
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  36994518 tgttcattggtgagattgggaaaatgggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 36994598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 48142541 - 48142439
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattga 111  Q
    ||||||| ||| ||| ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||       ||||||||||||||||    
T  48142541 gagattgggaacatgatagaaattagggtttgttctttgtgagcttgttgaagctagtttcttgtaacccttgtatatctctttgtaaagaactcattga 48142442  T
Q  112 tat 114  Q
    |||    
T  48142441 tat 48142439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 379385 - 379454
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  379385 gagattgagaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 379454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26175810 - 26175730
Alignment:
Q  1 tgttcactggagagattgagaaaatggt-agaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  26175810 tgttcattggtgagattgggaaaatggggagaaattagggttg-ttctttgtgagcttgttgaaactaatttcttgtaaccc 26175730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 54883014 - 54883142
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaa 99  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||| ||       || |    
T  54883014 tgttcattggtgagattgggaaaatgggtagaaattagggttgttt-tttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-a 54883111  T
Q  100 agaactcattgatattggattgtagggatca 130  Q
    |||||||||||||| ||||||| ||||||||    
T  54883112 agaactcattgatagtggattggagggatca 54883142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 4587973 - 4588037
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||||    
T  4587973 aaaaaggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaaccctttt 4588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 6542333 - 6542269
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||||| | ||||||    
T  6542333 aaaatggtagaaattaggatttgttctttgtgagcttgttgaaactaatttcttgttagcctttt 6542269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6655950 - 6656101
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaa 99  Q
    |||||||| | |||||||| ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||| | ||| ||       || |    
T  6655950 tgttcacttgtgagattgaaaaaatgggtagaaattaaggttg-ttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-a 6656047  T
Q  100 agaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    |||||||||||||| ||||||| || ||||| ||| | | | ||||||||||||    
T  6656048 agaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaa 6656101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37229896 - 37229812
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||||||||||||||| |||  |||||||||||||||||| || | ||||| |||||||||||||    
T  37229896 tgttcattggtgagattgggaaaatggtagaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttt 37229812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5208016 - 5207862
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaa 100  Q
    |||||| ||||| |||||  |||| ||||||||||| |||| ||||||||||| ||||||||| ||||||| ||| ||||||| ||||       || ||    
T  5208016 tgttcattggagtgattggaaaaagggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaacccttgtatatctatttgt-aa 5207918  T
Q  101 gaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaattt 156  Q
    ||||||||||||| ||||||| |  ||||| ||| |  || |||||||||||||||    
T  5207917 gaactcattgatagtggattggaaagatcaatctctctcccagagtaggtcaattt 5207862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 12119559 - 12119662
Alignment:
Q  27 gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtaggg 126  Q
    |||||||||| |||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||       |||||||||||||| ||| ||||||| || |    
T  12119559 gtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagag 12119658  T
Q  127 atca 130  Q
    ||||    
T  12119659 atca 12119662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 152
Target Start/End: Complemental strand, 26699585 - 26699466
Alignment:
Q  33 attaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagggatcagt 132  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||||| ||       |||||||||||||| ||| ||||||| || ||||| |    
T  26699585 attagggtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaat 26699486  T
Q  133 cttttacctagagtaggtca 152  Q
    || |  || |||||||||||    
T  26699485 ctctatcccagagtaggtca 26699466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 55085538 - 55085462
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  55085538 tgttcattggtgagattg-gaaaataggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttcttgtaa 55085462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27417139 - 27417059
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  |||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  27417139 tgttcattggtgagattggtaaaatgtgtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 27417059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34570588 - 34570508
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  34570588 tgttcattggtgagattgggaaaataggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 34570508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46703494 - 46703574
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||||| |||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  46703494 tgttcattggtgagattgggaaaatgagtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 46703574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54200080 - 54200000
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  54200080 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 54200000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 56178811 - 56178727
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| || ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  56178811 tgttcattggtgagattgggaaaaagggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccctttt 56178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40632439 - 40632518
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| ||||||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  40632439 tgttcattggtgagattgggaaaatgggtagaaattagagttg-ttctttgtgagcttgttgaagctaatttcttgtaacc 40632518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 48143058 - 48143121
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  48143058 aaaaaggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccctttt 48143121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 9927630 - 9927552
Alignment:
Q  3 ttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  9927630 ttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 9927552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26364230 - 26364308
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||    
T  26364230 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaac 26364308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29056352 - 29056439
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||||| | ||||||||| ||||||||||| |||||  ||| |||||||||| |||||||  ||||||||||||| || |||||||||    
T  29056352 tgttcattagagagattgggaaaatggtaggaattagagtttgttctttgtgtgcttgttagaactaatttcttgcaatccttttata 29056439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 2209718 - 2209787
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||  |||||||||||||||||||| |||||||||||||||||    
T  2209718 gagattgggaaaatgggtagaaattagggttt-ttctttgtgagcttgttgaagctaatttcttgtaaccc 2209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 21688253 - 21688321
Alignment:
Q  12 gagattgagaaaat--ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||||||||   ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  21688253 gagattgagaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaaactaattttttgtaac 21688321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47038583 - 47038507
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  47038583 tgttcattggtgagattg-gaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaa 47038507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 50262864 - 50262795
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| | ||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  50262864 gagattgggaaaatggatcgaaattacggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 50262795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5429673 - 5429753
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||||| |||||||||| ||||  ||||| |||||||||||||| |||||||||||||||||    
T  5429673 tgttcattggtgagattgggaaaatgagtagaaattagggtta-ttcttcgtgagcttgttgaagctaatttcttgtaaccc 5429753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8665402 - 8665482
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||| || |||||||| ||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||    
T  8665402 tgttcattggtgagaatgggaaaatgggtagaaattagggttg-ttctttgagagcttgttgaagctaatttcttgtaaccc 8665482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36463563 - 36463483
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| || || ||| |||||||||||||||| |||||||||||||||||    
T  36463563 tgttcattggtgagattgggaaaatggatagaaattagggctg-ttcattgtgagcttgttgaagctaatttcttgtaaccc 36463483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 50674009 - 50673943
Alignment:
Q  12 gagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||||||| |||||||||| | |||  ||||||||||||||||||| |||||||||||||||    
T  50674009 gagattgagaaaatgagtagaaattaggattg--tctttgtgagcttgttgaagctaatttcttgtaac 50673943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 12073397 - 12073464
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| |||| ||||||||||||||||||||| ||||||| |||||||    
T  12073397 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaagctaatttattgtaac 12073464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 32091485 - 32091556
Alignment:
Q  13 agattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||||||| ||||||||| |||| |||||| | ||| |||||||||||||||||||||||| |||||    
T  32091485 agattgggaaaatgctagaaatta-ggtttgttcttggagagtttgttgaaactaatttcttgtaactctttt 32091556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48893816 - 48893734
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggt---tctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |   | ||||||||||||||||| |||||||||||||||    
T  48893816 tgttcattggtgagattgagaaaatgggtagaaattagggttgttcattgtttgtgagcttgttgaagctaatttcttgtaac 48893734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31474144 - 31474223
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||||| ||||||||| |  | ||||||| |||| |||||||| |||||||||||||||    
T  31474144 tgttcattggtgagattgagaaaatgggtagaaattaggtcttgttctttttgagtttgttgaagctaatttcttgtaac 31474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35662435 - 35662513
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||| ||||||| ||||||||| ||||| |||||| |||| |||||||| |||||||||||||||    
T  35662435 tgttcattggtgagattgaaaaaatgggtagaaattagggttg-ttctttatgagtttgttgaagctaatttcttgtaac 35662513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 52467502 - 52467448
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||||    
T  52467502 ggtagaaatta-ggtttgttctttgtgagcttgttgaagctaatatcttgtaaccc 52467448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5871814 - 5871894
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||| |||| |||||||||||||||||| || | |||||||||||||||    
T  5871814 tgttcattggtgagattggaaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaagcaaatttcttgtaaccc 5871894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12739724 - 12739644
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  12739724 tgttcattggtgagattgggaaaatggatagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 12739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12745610 - 12745530
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||  |||||||| ||||||||| ||||| |||||||||| |||||  ||||||||||||||||||||    
T  12745610 tgttcattggcgagattaggaaaatgggtagaaattagggttg-ttctttgtgaacttgtcaaaactaatttcttgtaaccc 12745530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12747930 - 12747850
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  12747930 tgttcattggtgagattgggaaaatggatagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 12747850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 24969132 - 24969184
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||| | || ||||||||||||||||||||| |||||||||||||||    
T  24969132 ggtagaaatta-gatttgttctttgtgagcttgttgaagctaatttcttgtaac 24969184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 41639432 - 41639500
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| ||||| |||||||||| ||| ||||| |||||||||||||||||    
T  41639432 agattgggaaaatgggtagaaattagggttg-ttctttgtgaactttttgaagctaatttcttgtaaccc 41639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 44570528 - 44570428
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    ||||||||| |||||||||||||||| | ||| || || | ||||||||||||||||||||||||||||  |||| ||       |||||||||||||||    
T  44570528 agagattga-aaaatggtagaaattatgtttg-ttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattg 44570431  T
Q  111 ata 113  Q
    |||    
T  44570430 ata 44570428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 46147539 - 46147487
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||    
T  46147539 ggtagaaattagggttg-ttcattgtgagcttgttgaagctaatttcttgtaac 46147487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52082831 - 52082751
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| |||||| || ||||| |||||||||| |||||  ||||||||||||||||||||    
T  52082831 tgttcattggtgagattgggaaaatgggtagaaactagggttg-ttctttgtgaacttgtcaaaactaatttcttgtaaccc 52082751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52095536 - 52095456
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  52095536 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 52095456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29999980 - 29999897
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| ||||||||||| |||| ||||||||||| | |||  || ||||||||||||||| |||||    
T  29999980 tgttcattggtgagattgggaaaagggtagaaattagggtt-gttctttgtgaacatgtcaaagctaatttcttgtaactctttt 29999897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 37740640 - 37740699
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  37740640 aaaagggtataaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 37740699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 41964435 - 41964489
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| ||||||||||||||||| || ||||||| |||||||||    
T  41964435 ggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttattgtaaccc 41964489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6677481 - 6677547
Alignment:
Q  20 gaaaatggtagaaattaaggttggtt-ctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||||| | ||  || ||| | |||||||||||| |||||||||||||||||||||    
T  6677481 gaaaatggtagaaattaggttttttttcttggagagcttgttgaagctaatttcttgtaaccctttt 6677547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 22882889 - 22882806
Alignment:
Q  37 aggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    ||||| |||||| | ||| |||||||| ||||||||||||||||||||| ||       ||||||||||||||| || ||||||    
T  22882889 aggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggatt 22882806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 22934553 - 22934470
Alignment:
Q  37 aggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    ||||| |||||| | ||| |||||||| ||||||||||||||||||||| ||       ||||||||||||||| || ||||||    
T  22934553 aggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggatt 22934470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 16422765 - 16422697
Alignment:
Q  16 ttgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||||||| | ||| ||| |||| |||||| ||||| ||||||||| | |||||||||    
T  16422765 ttgagaaaatggtagaaatt-atgtttgttttttgagagctttttgaagctaatttctagaaaccctttt 16422697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 21704000 - 21703890
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||| ||||||||||| | || |||||| |  |||||||||||  | |||||||||| || |||| ||       |||||||||||||||    
T  21704000 agagattgagaaaaaggtagaaattaggttttgttcttagaaagcttgttgaagatgatttcttgtaccctttttgtatctttttgtaaagaactcattg 21703901  T
Q  111 atattggattg 121  Q
    | | |||||||    
T  21703900 acagtggattg 21703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 41639269 - 41639337
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| ||||| |||||||| | ||| ||||| |||||||||||||||||    
T  41639269 agattgggaaaatgggtagaaattagggttg-ttctttgtaaactttttgaagctaatttcttgtaaccc 41639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 44967993 - 44967924
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||||| ||||||||||||||||| | || | |||| | ||||||| |||| | ||||||||||||||    
T  44967993 agagattgggaaaatggtagaaattaggttttgctcttggagagcttgctgaagccaatttcttgtaacc 44967924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 5370232 - 5370173
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaa-ctaatttcttgtaaccctttt 85  Q
    ||||||||||| ||||| |||||||||| |||||  ||| |||||||||||||||||||||    
T  5370232 ggtagaaattagggttg-ttctttgtgaacttgtcaaaagctaatttcttgtaaccctttt 5370173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 13992445 - 13992382
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  13992445 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaatctaatttcttgtaactctttt 13992382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 4045424 - 4045546
Alignment:
Q  8 tggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactca 107  Q
    ||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||| | |||||||       ||||| ||||||    
T  4045424 tggagagattgggaaaatggtagaaattagggtttgttctttatgagcttgttgaagctaatttcttgtaatcattttatatctctttgtaaataactca 4045523  T
Q  108 ttgatattggattgtagggatca 130  Q
    |||||| ||||||| || |||||    
T  4045524 ttgatagtggattggagagatca 4045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3808883 - 3808803
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  3808883 tgttcattggtgagattgggaaaataggtagaaattagggttg-ttctttgtgagcttgttgaaactaatttcttgtaaccc 3808803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17762984 - 17763062
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  17762984 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 17763062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2973113 - 2973033
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  2973113 tgttcattggtgagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 2973033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21588925 - 21589005
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  21588925 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 21589005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21593658 - 21593738
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  21593658 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 21593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 5043632 - 5043699
Alignment:
Q  12 gagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  5043632 gagattgagaaaatgagtagaaatta-ggtttgttctttgtgagcttgttgaagctaatttcttgtaac 5043699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5406373 - 5406290
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  5406373 tgttcattggtgagattgggaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5406290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5410698 - 5410615
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  5410698 tgttcattggtgagattgggaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5410615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 17758028 - 17758097
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  17758028 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 17758097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9183205 - 9183125
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| ||||||||||  |||||||| |||||||||||||||||    
T  9183205 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaatttgttgaagctaatttcttgtaaccc 9183125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 16569038 - 16569107
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||||||||||||| ||||||||| | || |||||||||||||||||| || ||||||||||||||||    
T  16569038 gagattgagaaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaacc 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 31404837 - 31404765
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  31404837 gagattgggaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 31404765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28137582 - 28137431
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaa 99  Q
    |||||| ||| |||| || |||||||| ||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||| ||       || |    
T  28137582 tgttcattggtgagaatgggaaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttctttgt-a 28137485  T
Q  100 agaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    |||||||||||||| ||||||| || ||||| ||| |  || ||||||||||||    
T  28137484 agaactcattgatagtggattggagagatcaatctctcccccagagtaggtcaa 28137431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 26954448 - 26954382
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||| ||||| |||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  26954448 gagattgggaaattggtataaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 26954382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3039077 - 3038997
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||| |||||||||| ||||| |||||||||||||||||    
T  3039077 tgttcattggtgagattgggaaaattggtagaaattagggttg-ttcattgtgagctttttgaagctaatttcttgtaaccc 3038997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2171705 - 2171622
Alignment:
Q  1 tgttcactggagagattgagaaaa-tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttt 84  Q
    |||||| ||| ||||||| ||||| |||||||||||| ||||| |||||||||| |||||  || ||||||||||||||||||||    
T  2171705 tgttcattggtgagattgggaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaacccttt 2171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5413567 - 5413484
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| ||||||||||| ||||| ||||||| || |||||  || |||||||||||||||||||||    
T  5413567 tgttcattggtgagattgggaaaaaggtagaaattagggttg-ttctttgcgaacttgtcaaagctaatttcttgtaaccctttt 5413484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 22424975 - 22424921
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  22424975 ggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 22424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 25073574 - 25073681
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattga 111  Q
    |||||||| |||||||||||||||| | ||  ||||| ||||||||||| || ||| ||| ||||||||||||| ||       ||||||||||||||||    
T  25073574 gagattgaaaaaatggtagaaatta-gatttattcttcgtgagcttgttaaagctattttattgtaacccttttgtatctctatgtaaagaactcattga 25073672  T
Q  112 tattggatt 120  Q
    || ||||||    
T  25073673 tagtggatt 25073681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 603220 - 603182
Alignment:
Q  43 gttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  603220 gttctttgtgagcttgttgaagctaatttcttgtaaccc 603182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 3072923 - 3072851
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||||||||| |||| |||| |||||| |||||  || ||||||||||||||| |||||    
T  3072923 gagattgggaaaatggtagaaattagggtt-gttcattgtgaacttgtcaaatctaatttcttgtaactctttt 3072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33211359 - 33211283
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgta 77  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||    
T  33211359 tgttcattggtgagattgggaaaattggtagaaattatggttg-ttctttgtgagcttgatgaagttaatttcttgta 33211283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 26830271 - 26830220
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||||||||  |||| |||||||||||||||||||| ||||||||||||||    
T  26830271 ggtagaaattagagttg-ttctttgtgagcttgttgaagctaatttcttgtaa 26830220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 30834689 - 30834626
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  30834689 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 30834626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 16452482 - 16452420
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttt 84  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||||||||    
T  16452482 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaacccttt 16452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 6097603 - 6097531
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||  |||||||||||||||| | ||| |||||||||| |||||  || ||||||||||||||| |||||    
T  6097603 gagattggaaaaatggtagaaattaggattg-ttctttgtgaacttgtcaaatctaatttcttgtaactctttt 6097531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 16554874 - 16554941
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  16554874 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 16554941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 16567201 - 16567265
Alignment:
Q  12 gagattgagaaaatggt-agaaattaaggttggttctttgtgagcttgttgaaactaatttcttg 75  Q
    ||||||| ||||||||| |||||||| | || ||| |||||||||||||| || |||||||||||    
T  16567201 gagattgggaaaatggttagaaattaggttttgttttttgtgagcttgtttaagctaatttcttg 16567265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 16631430 - 16631497
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  16631430 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 16631497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 27647866 - 27647933
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  27647866 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 27647933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 33648176 - 33648294
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattga 111  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||| |||||||||||| ||       ||||||||||||||||    
T  33648176 gagattgagaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattga 33648275  T
Q  112 tattggattgtagggatca 130  Q
    ||  |||||| || |||||    
T  33648276 tagcggattggagagatca 33648294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 24398076 - 24398180
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagg 125  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||       |||||||||||||||||| ||||||| ||     
T  24398076 ggtagaagttaaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggaga 24398175  T
Q  126 gatca 130  Q
    |||||    
T  24398176 gatca 24398180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13121763 - 13121842
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| |||| || ||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||    
T  13121763 tgttcattggtgagactgggaaaatggtagaaattagggtttgttctttgtgagcttgttgaagataatttcttgtaacc 13121842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 17490279 - 17490168
Alignment:
Q  44 ttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagggatcagtcttttacctag 143  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||       |||| ||||||||||||| |||||||||| ||||| ||| |  |||||    
T  17490279 ttctttgtgagcttgttgaagctaatttcttgtaactcttttgtaactctttgtaa-gaactcattgatagtggattgtagagatcaatctctcccctag 17490181  T
Q  144 agtaggtcaattt 156  Q
    |||||||||||||    
T  17490180 agtaggtcaattt 17490168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 26353189 - 26353262
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||| ||||  ||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||    
T  26353189 gagattgaaaaaagtgtagaaattaaggtttgttctttgtgagtttgttgaagctaatttcttgtaacactttt 26353262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38312234 - 38312314
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  38312234 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaaactaatttcttgtaaccc 38312314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 6595159 - 6595096
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  6595159 aaaatggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccctttt 6595096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 36318183 - 36318032
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaa 99  Q
    |||||| ||| |||||||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||| ||       || |    
T  36318183 tgttcattggtgagattggaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgt-a 36318086  T
Q  100 agaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    |||||||||||||| ||||||| || ||||| ||| |  | |||||||||||||    
T  36318085 agaactcattgatagtggattggagagatcaatctctcccttagagtaggtcaa 36318032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 34139934 - 34139865
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  34139934 gagattgagaaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 34139865  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 42288273 - 42288204
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  42288273 gagattgggaaaatgggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttattgtaaccc 42288204  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 42261648 - 42261576
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||| |||||||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||||    
T  42261648 gagattgagaaaatcgtagaaattaagtttg-ttcttggagagcttgttgaagctaatttcttgtaactctttt 42261576  T

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Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7815447 - 7815363
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||||||||| ||| ||||||| |||| |||||||   ||||||||||| ||||||||||||||| |||||    
T  7815447 tgttcattggtgagattgagaaaaaggttgaaattagggtttgttctttagaagcttgttgaagctaatttcttgtaactctttt 7815363  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 33162598 - 33162544
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  33162598 ggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 33162544  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 11690506 - 11690575
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  11690506 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 11690575  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 42362357 - 42362426
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  42362357 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 42362426  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 45726925 - 45727002
Alignment:
Q  3 ttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||| ||| ||||||| |||||||| |||||||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  45726925 ttcattggtgagattgggaaaatgggtagaaattagagttg-ttctttgtgagcttgttgaagctaatttcttgtaacc 45727002  T

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Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35447058 - 35446978
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||| ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  35447058 tgttcattggtgagattggtaaaattggtagaaattagggttg-ttctttgtgatcttgttgaatctaatttcttgtaaccc 35446978  T

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Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5723429 - 5723346
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||||||||| |||||||||| ||| | ||||||||||| |||||  || |||||||||||||||| ||||    
T  5723429 tgttcattggtgagattgagaaaagggtagaaatt-aggcttgttctttgtgaacttgtcaaagctaatttcttgtaaccttttt 5723346  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 723892 - 723838
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  723892 ggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 723838  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4484487 - 4484421
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  4484487 gagaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 4484421  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4503307 - 4503222
Alignment:
Q  1 tgttcactggagagattgagaaaa--tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||||||||||| |||||  |||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  4503307 tgttcattggagagattgggaaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaactctttt 4503222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 11049563 - 11049632
Alignment:
Q  20 gaaaatggtagaaattaaggttggttct---ttgtgagcttgttgaaactaatttcttgtaaccctttta 86  Q
    |||||||||| |||||| |||| |||||   |||||||||||||||| |||||||||| |||||||||||    
T  11049563 gaaaatggtataaattagggtttgttctaatttgtgagcttgttgaagctaatttcttataaccctttta 11049632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 24885669 - 24885735
Alignment:
Q  15 attgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  24885669 attgggaaaatgagtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 24885735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36773556 - 36773634
Alignment:
Q  1 tgttcactggagagattgagaaaatggtag-aaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| |  |||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  36773556 tgttcattggtgagattgggaaaatgggaataaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 36773634  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1631906 - 1631826
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||| | ||| |||||||||||||||||||| ||||| |||||||||||    
T  1631906 tgttcattggtgagattggaaaaatgggtagaaattaggattg-ttctttgtgagcttgttgaagctaatatcttgtaaccc 1631826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2334592 - 2334508
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| |||||||| ||||||| | ||||| |||||||||| ||||||||| ||||||||| ||||| |||||    
T  2334592 tgttcattggtgagattgggaaaatgggtagaaataagggttg-ttctttgtgaacttgttgaagctaatttctagtaactctttt 2334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11151765 - 11151685
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| || |||| |||||||| ||||||||| | || |||||||||||||||||| || |||||||||||||||||    
T  11151765 tgttcattggtgaaattgggaaaatgggtagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgtaaccc 11151685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29867863 - 29867943
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  29867863 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 29867943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36205838 - 36205754
Alignment:
Q  1 tgttcactggagagattgagaaaa-tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| |||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  36205838 tgttcattggtgagattgggaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaactctttt 36205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 6266696 - 6266764
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  6266696 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttgtcaaatctaatttcttgtaacc 6266764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 14202568 - 14202501
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| | ||| ||||||||||||||||| || |||||||||||||||    
T  14202568 gagattgggaaaatgggtagaaattatgtttg-ttctttgtgagcttgtttaagctaatttcttgtaac 14202501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 34811380 - 34811309
Alignment:
Q  16 ttgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||| |||||||||||||||||| ||| | ||| | |||||||||||| ||||||| ||||||| ||||||||    
T  34811380 ttgaaaaaatggtagaaattaagattgct-cttagagagcttgttgaagctaatttattgtaactcttttata 34811309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 36988229 - 36988166
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||| |||||||||||  |||||||||||||||||| |||||    
T  36988229 aaaagggtagaaattagggttg-ttctatgtgagcttgtcaaaactaatttcttgtaactctttt 36988166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 14633974 - 14633920
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| | ||| ||||||||||||||||| || |||||||||||||||||    
T  14633974 ggtagaaattaggattg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 14633920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 30833357 - 30833423
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||| ||||| |||||||||| |||||  ||  ||||||||||||||||||||    
T  30833357 gagaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagttaatttcttgtaaccctttt 30833423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18674360 - 18674411
Alignment:
Q  28 tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||| |||| ||||||||||||||  || ||||||||||||||||||||    
T  18674360 tagaaattatggtttgttctttgtgagct--tttaaactaatttcttgtaaccc 18674411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 30218207 - 30218135
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||  ||||||| ||| |||| |||||| | |||||| ||||| |||||||||||||||| ||||    
T  30218207 gagattgagaaatgggtagaagtta-ggtttgttcttggagagcttattgaagctaatttcttgtaaccatttt 30218135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 32289577 - 32289641
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  32289577 gaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaatctaatttcttgtaactctttt 32289641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 45099770 - 45099833
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  45099770 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaactctttt 45099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 36574682 - 36574536
Alignment:
Q  8 tggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactca 107  Q
    ||||||||||| | ||| ||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||||||||       ||||||||||||    
T  36574682 tggagagattggggaaa-ggtagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactca 36574584  T
Q  108 ttgatattggattgtagggatcagtcttttacctagagtaggtcaattt 156  Q
    |||||| ||| ||| || ||||| ||   | ||||||||||||||||||    
T  36574583 ttgatagtggtttggagagatcaatc-catccctagagtaggtcaattt 36574536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 4253683 - 4253584
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||       | |||||||||||||||| ||||||    
T  4253683 aaaatggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggatt 4253584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 23343970 - 23344052
Alignment:
Q  2 gttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttt 84  Q
    ||||| ||| ||||||  ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  23343970 gttcattggtgagatttggaaaagggtagaaattaaggtttattctttgtgagcttgttgaagctaatttcttgtaacccttt 23344052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 23565210 - 23565071
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagg 125  Q
    ||||||||||| |  | ||||||||||||||||||||||||||||||||||||| ||||| ||       || ||||||||||||||| ||||||| ||     
T  23565210 ggtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggaga 23565112  T
Q  126 gatcagtcttttacctagagtaggtcaatttagattgaact 166  Q
    ||||| ||| |  ||||||||||||||| || || ||||||    
T  23565111 gatcaatctctctcctagagtaggtcaagttggactgaact 23565071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22269967 - 22270047
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  22269967 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 22270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30024906 - 30024826
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||    
T  30024906 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttcattgtgagcttgttgaagctaatttcttgtaaccc 30024826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47674117 - 47674037
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  47674117 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 47674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2361146 - 2361068
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  2361146 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 2361068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 1113662 - 1113731
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||    
T  1113662 gagattgagaaaatggatagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttataaccc 1113731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8359491 - 8359411
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  8359491 tgttcattggggagattgggaaaatgggtagaaattagggttt-ttctttgtgagcttgtttaaactaatttcttgtaaccc 8359411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26417310 - 26417390
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||    
T  26417310 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagataatttcttgtaaccc 26417390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31733143 - 31733063
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||| ||||||||||| ||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||    
T  31733143 tgttcattggtgagactgagaaaatgggtagaaattagggttg-ttctttgtgagcttggtgaagctaatttcttgtaaccc 31733063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47676310 - 47676230
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| ||||||||||  |||||||| |||||||||||||||||    
T  47676310 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaatttgttgaagctaatttcttgtaaccc 47676230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48491573 - 48491653
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  48491573 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 48491653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 23555055 - 23555118
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| |||||    
T  23555055 aaaatggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaacactttt 23555118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 29608742 - 29608809
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  29608742 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 29608809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 2390302 - 2390356
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  2390302 ggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 2390356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48599508 - 48599430
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| || |||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  48599508 tgttcattggtgatattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 48599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 4508869 - 4508800
Alignment:
Q  12 gagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| ||||||| |||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||    
T  4508869 gagattgggaaaatgagtagaaattagggttg-ttctttgtgagcttattgaagctaatttcttgtaaccc 4508800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4586155 - 4586235
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| ||||||| |||||||||    
T  4586155 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaattttttgtaaccc 4586235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 6431977 - 6432045
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| | ||| |||||||||||||||||||| |||||||||||||||||    
T  6431977 agattgggaaaatgggtagaaattaggattg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 6432045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 22328538 - 22328481
Alignment:
Q  28 tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||  ||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  22328538 tagaaattagagtttgttctttgtgagcttgttgaagctaatttcttgtaactctttt 22328481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27347811 - 27347891
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| | ||| |||||||||| ||||||||| |||||||||||||||||    
T  27347811 tgttcattggtgagattgggaaaatgggtagaaattaggattg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 27347891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 43363628 - 43363564
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||||| |||| |||||| | |||||||||||||||||||| ||||||| |||||    
T  43363628 gaaaatggtagaaatta-ggtttgttcttggagagcttgttgaaactaatttattgtaactctttt 43363564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 4510696 - 4510642
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||    
T  4510696 ggtagaaattaaggttg-ttctttgtgagtttattgaagctaatttcttgtaaccc 4510642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 4512538 - 4512484
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||    
T  4512538 ggtagaaattaaggttg-ttctttgtgagtttattgaagctaatttcttgtaaccc 4512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31518789 - 31518867
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||| ||||||||||| |||| ||||||||||||||| ||||| ||| |||||||||||    
T  31518789 tgttcattggtgagattgggaaaataggtagaaatta-ggtttgttctttgtgagcttattgaagctagtttcttgtaac 31518867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34310890 - 34310812
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||  |||||||| |||||||||||||||    
T  34310890 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaaattgttgaagctaatttcttgtaac 34310812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 496146 - 496077
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||| | |||||||||||||||||||| ||||||||||| |||||    
T  496146 gagattgggaaaatgggtagaaattagggtag-ttctttgtgagcttgttgaagctaatttcttgcaaccc 496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 3904781 - 3904707
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||| ||||||||||||||||| | || |||||||| |||| | |||||  |||||||||||||| |||||    
T  3904781 agagattgggaaaatggtagaaattaggttttgttctttgagagcctattgaatgtaatttcttgtaacactttt 3904707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5514183 - 5514113
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaattt 71  Q
    |||||| | |||||||||| ||||  |||||||||| | || ||||||||||||||||||||| |||||||    
T  5514183 tgttcatttgagagattgaaaaaagagtagaaattatgttttgttctttgtgagcttgttgaagctaattt 5514113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 31105556 - 31105487
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| | ||  |||||||||||||||||||| |||||||||||||||||    
T  31105556 gagattgggaaaatgggtagaaatta-gattttttctttgtgagcttgttgaagctaatttcttgtaaccc 31105487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41317608 - 41317531
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||||  || ||||||||||||||    
T  41317608 tgttcattggtgagattgggaaaattggtagaaattagggttg-ttctttgtgagcttgtcaaagctaatttcttgtaa 41317531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 12098021 - 12097953
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| ||||| ||| ||||||||||||||||  ||||||||||||||||    
T  12098021 agattgggaaaatgggtagaaattagggttg-ttcattgtgagcttgttgaagttaatttcttgtaaccc 12097953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18126638 - 18126718
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  |||||| |||||||||| ||||| |||||||||| |||||| || |||||||||||||||||    
T  18126638 tgttcattggtgagattggaaaaatgtgtagaaattagggttg-ttctttgtgaacttgttcaagctaatttcttgtaaccc 18126718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35853908 - 35853992
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| || ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  35853908 tgttcattggtgagattgggaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 35853992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36146582 - 36146509
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttct 73  Q
    |||||| ||| ||||||| |||||||| |||||||||  ||| ||| ||||||||||||||||| |||||||||    
T  36146582 tgttcattggtgagattgggaaaatgggtagaaattagagtttgttatttgtgagcttgttgaagctaatttct 36146509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48489425 - 48489505
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||  | ||||||||| |||||||||||||||||    
T  48489425 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgaaaacttgttgaagctaatttcttgtaaccc 48489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 14380035 - 14379884
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaa 99  Q
    |||||| ||| ||||||| ||||| || ||||||||| ||||| |||||||||| |||||  || ||||||||||||||||| ||| ||       || |    
T  14380035 tgttcattggtgagattgggaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-a 14379938  T
Q  100 agaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    |||||||||||||| ||||||| || ||||| ||| |  |||||| ||||||||    
T  14379937 agaactcattgatagtggattggagagatcaatctctcccctagattaggtcaa 14379884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29991048 - 29991131
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| | ||||||||| ||||| || ||||||| |||||  || |||||||||||||||||||||    
T  29991048 tgttcattggtgagattgggaaaaggatagaaattagggttg-ttatttgtgaacttgtcaaagctaatttcttgtaaccctttt 29991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 38671385 - 38671318
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| || ||||||| |||||||    
T  38671385 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttattgtaac 38671318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3258989 - 3259067
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| |||||| || ||||| ||||||||||||||||| || ||||||| |||||||    
T  3258989 tgttcattggtgagattgggaaaatgggtagaaactagggttg-ttctttgtgagcttgtttaagctaatttattgtaac 3259067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8153336 - 8153414
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| ||||||| |||||||||| ||||| ||||||||||| ||||  || |||||||||||||||    
T  8153336 tgttcattggtgagattgggaaaatgagtagaaattagggttg-ttctttgtgagattgtcaaagctaatttcttgtaac 8153414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24526071 - 24525992
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| || |||| |||||||| ||||||||| | || |||||||||||||||||  || |||||||||||||||    
T  24526071 tgttcattggtgaaattgggaaaatgggtagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttgtaac 24525992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 32358183 - 32358148
Alignment:
Q  46 ctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||||| |||||||||||||||||    
T  32358183 ctttgtgagcttgttgaagctaatttcttgtaaccc 32358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 43864264 - 43864318
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| |||||||||| ||||||||| |||||||| ||||||||    
T  43864264 ggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcctgtaaccc 43864318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 25615858 - 25615927
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| |||| ||||| |||| ||||||| || |||||||||||||||||    
T  25615858 gagattgggaaaatgggtagaaatta-ggtttgttctatgtgcgcttgtttaagctaatttcttgtaaccc 25615927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 26639325 - 26639398
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||| |||||||||||||||| ||||  |||||| | ||| |||||||   ||||||||||||||||||||    
T  26639325 agagattgtgaaaatggtagaaatt-aggtatgttcttggagagtttgttgatgttaatttcttgtaaccctttt 26639398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 2759329 - 2759284
Alignment:
Q  43 gttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    ||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  2759329 gttctttgtgaacttgttgaagctaatttcttgtaactcatttata 2759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4178768 - 4178852
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| |||||  ||||||||||| ||||| |||||||||| ||||   || |||||||||||||||||||||    
T  4178768 tgttcattggtgagattgggaaaaaaggtagaaattagggttg-ttctttgtgaacttgggaaagctaatttcttgtaaccctttt 4178852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14070007 - 14069927
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||| || ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  14070007 tgttcattggtgagattgggaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 14069927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 19502200 - 19502256
Alignment:
Q  28 tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||| || |||||||||||||  || ||||||||||||||| |||||    
T  19502200 tagaaattaaggttgttt-tttgtgagcttgtcaaagctaatttcttgtaactctttt 19502256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 43504318 - 43504246
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||| ||||||||||| ||||| ||| |||||| |||||  || ||||||||||||||| |||||    
T  43504318 gagattgggaaaagggtagaaattagggttg-ttcattgtgaacttgtcaaatctaatttcttgtaactctttt 43504246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 20343902 - 20343969
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  20343902 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 20343969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 25767114 - 25767055
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  25767114 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 25767055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 41649159 - 41649105
Alignment:
Q  25 tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||| |||| ||||||||||||||||||  | |||||||||||||||||    
T  41649159 tggtagaaatta-ggtttgttctttgtgagcttgtt-tagctaatttcttgtaaccc 41649105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 8e-23; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 316769 - 316907
Alignment:
Q  13 agattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgat 112  Q
    |||||||||||| ||||||||||| |||| |||||| | |||||||||||| |||||||||||||| |||||| ||       |||||||||||||||||    
T  316769 agattgagaaaaaggtagaaatta-ggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgat 316867  T
Q  113 attggattgtagggatcagtcttttacctagagtaggtca 152  Q
    | ||||| | |||||||| ||| |  ||||||||||||||    
T  316868 aatggatcggagggatcaatctctcccctagagtaggtca 316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 13695858 - 13695746
Alignment:
Q  8 tggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactca 107  Q
    ||||||||||| ||||| |||| |||||| |||| |||||||||||||||||| || ||||||||||||||||||||| ||       ||||||||||||    
T  13695858 tggagagattgggaaaagggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaactca 13695759  T
Q  108 ttgatattggatt 120  Q
    || ||| ||||||    
T  13695758 ttaatagtggatt 13695746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27637787 - 27637707
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||    
T  27637787 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttatgagcttgtttaaactaatttcttgtaaccc 27637707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28278310 - 28278390
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  28278310 tgttcattggtgagattgggaaaatgggtagaaattatggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 28278390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 538030 - 538099
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  538030 gagattgggaaaatgggtagaaattaaggttgct-ctttgtgagcttgttgaagctaatttcttgtaaccc 538099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 3075821 - 3075752
Alignment:
Q  12 gagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  3075821 gagattgagaaaataggtagaaatta-ggtttgttctttgtgagcttgctgaatctaatttcttgtaaccc 3075752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 38747010 - 38747079
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  38747010 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 38747079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 213459 - 213539
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  213459 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttaaagctaatttcttgtaaccc 213539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 533763 - 533843
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  533763 tgttcattggtgagattgggaaaatgggtagaaattagggttggt-ctttgtgagcttgttgaagctaattttttgtaaccc 533843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 8566109 - 8565969
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||||||| || ||||||||||||||||| ||| ||       || ||||||||||||    
T  8566109 gagattgagaaaatgggtagaactta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctctgt-aagaactcattg 8566012  T
Q  111 atattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    ||| ||||||| || ||||| ||| | ||| ||| ||||||||    
T  8566011 atagtggattggagagatcaatctctcacccagattaggtcaa 8565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25412755 - 25412838
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  25412755 tgttcattggtgagattgggaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 25412838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40147255 - 40147333
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  40147255 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttcttcgtgagcttgttgaagctaatttcttgtaac 40147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 39468712 - 39468643
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  39468712 gagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 39468643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13239745 - 13239829
Alignment:
Q  1 tgttcactggagagattg-agaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| | |||||||||||||||| ||||  |||||||||| ||||||||| ||||||||||||||| |||||    
T  13239745 tgttcattggtgagattggaaaaaatggtagaaattagggttt-ttctttgtgaacttgttgaagctaatttcttgtaactctttt 13239829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 13488209 - 13488277
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  13488209 agattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 13488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30182582 - 30182666
Alignment:
Q  1 tgttcactggagagattgagaaaa-tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| |||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  30182582 tgttcattggtgagattgggaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 30182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42426409 - 42426329
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| ||||||||||  |||||||| ||||||||||| |||||    
T  42426409 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaaattgttgaagctaatttcttgcaaccc 42426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42428604 - 42428524
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||  |||||||||| ||||||||| |||||||||||||||||    
T  42428604 tgttcattggtgagattgggaaaatgggtagaaattatggttt-ttctttgtgaacttgttgaagctaatttcttgtaaccc 42428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 30802858 - 30802906
Alignment:
Q  37 aggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  30802858 aggtttgttctttgtgagcttgttgaaactaatttattgtaatcctttt 30802906  T

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Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 16452100 - 16452154
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||| ||| |||||| ||||||||||||| |||||||||||||||||    
T  16452100 ggtagaaattaagtttg-ttctttctgagcttgttgaagctaatttcttgtaaccc 16452154  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 30683057 - 30683014
Alignment:
Q  42 ggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||| ||||||||| |||||||||||||||||||||    
T  30683057 ggttctttgtgaacttgttgaagctaatttcttgtaaccctttt 30683014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 33831700 - 33831754
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  33831700 ggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 33831754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 5887579 - 5887510
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| | || |||||||||||||||||| || ||||||||||| |||||    
T  5887579 gagattgagaaaatggatagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgcaaccc 5887510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 42310098 - 42310025
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||| ||| ||||||| ||| ||| | |||||||||||||||||| ||||||||||||||| |||||    
T  42310098 gagattgagaaattgggtagaaatcaagtttgat-ctttgtgagcttgttgaagctaatttcttgtaactctttt 42310025  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 9049496 - 9049432
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| |||||||||  ||| ||| ||||||||||||||||| |||||||||||||||| ||||    
T  9049496 gaaaatgatagaaattagtgtttgtt-tttgtgagcttgttgaagctaatttcttgtaaccatttt 9049432  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16641114 - 16641039
Alignment:
Q  1 tgttcactggagagattgagaaaa---tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttct 73  Q
    |||||| ||| |||||||||||||   ||||||||||||  ||| ||||||||||||||||||||| || ||||||    
T  16641114 tgttcattggcgagattgagaaaaaaatggtagaaattagtgtttgttctttgtgagcttgttgaagctgatttct 16641039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 29720369 - 29720437
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  29720369 gagattgggaaaagggtagaaattagggttagttcattgtgaacttgtctaatctaatttcttgtaacc 29720437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 29722529 - 29722597
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  29722529 gagattgggaaaagggtagaaattagggttagttcattgtgaacttgtctaatctaatttcttgtaacc 29722597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 29751323 - 29751255
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  29751323 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttgtcaaatctaatttcttgtaacc 29751255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 32636820 - 32636898
Alignment:
Q  3 ttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||    
T  32636820 ttcattggtgagattgggaaaatgggtagaaattatggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccc 32636898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 9789387 - 9789315
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||  |||| ||||||||||||||||| ||| |||||| |||||  || ||||||||||||||| |||||    
T  9789387 gagattggaaaaagggtagaaattaaggttg-ttccttgtgaacttgtcaaatctaatttcttgtaactctttt 9789315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16409480 - 16409552
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||  |||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  16409480 gagattggaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaatctaatttcttgtaactctttt 16409552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 26177895 - 26177959
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||| ||||||||||| ||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  26177895 gaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaatctaatttcttgtaactctttt 26177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 33906154 - 33906052
Alignment:
Q  52 gagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagggatcagtcttttacctagagtaggtc 151  Q
    |||||||| ||| |||| ||||||||| |||||| ||       |||||||||||||||||| | ||||| |  ||||| ||| || |||||||||||||    
T  33906154 gagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggtc 33906055  T
Q  152 aat 154  Q
    |||    
T  33906054 aat 33906052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 35616174 - 35616275
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||   |||||||||| |||| |||||| | ||||| ||| ||  |||||||||||||||||||| ||       |||||||||||||||    
T  35616174 agagattgagaaatgagtagaaatta-ggtttgttcttggagagctcgtttaagttaatttcttgtaacccttttgtatttctttgtaaagaactcattg 35616272  T
Q  111 ata 113  Q
    |||    
T  35616273 ata 35616275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 13343076 - 13343139
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||| ||||||    
T  13343076 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaatcctttt 13343139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 22536452 - 22536385
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  22536452 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 22536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 5434033 - 5433963
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    ||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  5434033 gagaaaatggtagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttata 5433963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 54739118 - 54739008
Alignment:
Q  10 gagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcatt 109  Q
    |||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||||||  |||||| ||||||||       ||||||||||||||    
T  54739118 gagagattgaaaaaatggtagaaattagtgtttgttctttgtgagcttgttgaaactaattt-atgtaactcttttatatctctctgtaaagaactcatt 54739020  T
Q  110 gatattggattg 121  Q
    |||| |||||||    
T  54739019 gatagtggattg 54739008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46860468 - 46860548
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  46860468 tgttcattggtgagattgagaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 46860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 32891108 - 32891176
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  32891108 gagattgagaaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaac 32891176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 45095158 - 45095308
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaa 100  Q
    |||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||  || ||||||||||||||||||||| ||       || ||    
T  45095158 tgttcattggtgagattgggaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aa 45095255  T
Q  101 gaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    ||||||||||||| ||||||| || ||||| ||| |   ||||||||||||||    
T  45095256 gaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaa 45095308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 37761634 - 37761560
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||| |||||||| |||| ||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  37761634 agagaatgagaaaaaggtaaaaattaaggtttgttctttgtgggcttgttaaaactaatttattgtaaccctttt 37761560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 49199633 - 49199564
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  49199633 gagattgggaaaatgggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 49199564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40735377 - 40735456
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||| ||||||||    
T  40735377 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttattgtaacc 40735456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40734492 - 40734570
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  40734492 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaacctaatttcttgtaac 40734570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43401976 - 43401898
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  43401976 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 43401898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5236630 - 5236550
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  5236630 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 5236550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 30236130 - 30236198
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  30236130 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaacc 30236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 34491208 - 34491284
Alignment:
Q  3 ttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  34491208 ttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 34491284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44700652 - 44700573
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  44700652 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagtttgttgaagctaatttcttgtaacc 44700573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 46173376 - 46173431
Alignment:
Q  25 tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  46173376 tggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 46173431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 5373247 - 5373314
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||| ||||||||||| | || ||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  5373247 aaaagggtagaaattaggctttgttctttttgagcttgttgaagctaatttattgtaacccttttata 5373314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 7762261 - 7762343
Alignment:
Q  3 ttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||| ||||||||||||| || ||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| |||||    
T  7762261 ttcattggtgagattgagaaaaagggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaactctttt 7762343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9636282 - 9636216
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||| ||||| |||||||||| |||||  ||||||||||||||||||||||||    
T  9636282 gagaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaaactaatttcttgtaaccctttt 9636216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 28253422 - 28253363
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||  ||||||||||||||    
T  28253422 gaaaatggtagaaattagggttcgttcattgtgagcttgttgaagttaatttcttgtaac 28253363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31340375 - 31340297
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||| |||||||||| |||||| |||||||||||||||||||| |||||||| ||||||    
T  31340375 tgttcattggtgagattgggaaaattggtagaaattgaggttg-ttctttgtgagcttgttgaagctaatttcatgtaac 31340297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 22835165 - 22835096
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  22835165 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 22835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 31314450 - 31314519
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| ||||| ||| |||||| ||||||||| |||||||||||||||||    
T  31314450 gagattgagaaaatgggtagaaattagggttg-ttcattgtgatcttgttgaagctaatttcttgtaaccc 31314519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 47304256 - 47304325
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||    
T  47304256 gagattgagaaaatgggtagaaattatggttg-ttctttgtgagcttgttgaagttaatatcttgtaaccc 47304325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29196561 - 29196480
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||  || ||||||||||| |||||    
T  29196561 tgttcattggtgagattgggaaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaaccc 29196480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54593698 - 54593778
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||||| | |||||||| ||||| |||||||||||||||||||| ||||||| |||||||||    
T  54593698 tgttcattggtgagattgggaaaatgtgcagaaattagggttg-ttctttgtgagcttgttgaagctaatttattgtaaccc 54593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 1313969 - 1313860
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||| |||| |||||| | || |||||| | ||||||||| || ||||||||||| || |||||| ||       | |||||||||||||    
T  1313969 agagattgagaaaagggtaaaaattatgttttgttcttggagagcttgttaaagctaatttcttgcaagccttttgtatatctttgaaaagaactcattg 1313870  T
Q  111 atattggatt 120  Q
    ||||||||||    
T  1313869 atattggatt 1313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 33191836 - 33191912
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttat 87  Q
    ||||||||||||||| ||||||| || | || |||||| | |||||||||||| |||| ||||||||||| ||||||    
T  33191836 agagattgagaaaatagtagaaactatgttttgttcttagagagcttgttgaagctaagttcttgtaaccattttat 33191912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29813083 - 29813137
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  29813083 ggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 29813137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43403919 - 43403841
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| | ||| |||||||||||||||||||| || ||||||||||||    
T  43403919 tgttcattggtgagattgggaaaatgggtagaaattaggcttg-ttctttgtgagcttgttgaagctcatttcttgtaac 43403841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 760852 - 760921
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| |||  |||||||||||||||||| || |||||||||||||||||    
T  760852 gagattgggaaaatgggtagaaatta-ggtctgttctttgtgagcttgtttaagctaatttcttgtaaccc 760921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 9666615 - 9666553
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||||||||||   || ||||||||||||||||||||| ||||||||||||||| | ||||||    
T  9666615 ggtagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaactcatttata 9666553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 19684052 - 19683979
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  19684052 gagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 19683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44331539 - 44331616
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||  |||||||| ||||||||| ||||| ||| |||||||||||||||| ||||||||||||||    
T  44331539 tgttcattggtgagattaggaaaatgggtagaaattagggttg-ttcattgtgagcttgttgaagctaatttcttgtaa 44331616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 7764478 - 7764542
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||| ||||||||||| ||||| |||||||||| |||||| || ||||||||||||||| |||||    
T  7764478 gaaaagggtagaaattagggttg-ttctttgtgaacttgttaaagctaatttcttgtaactctttt 7764542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 32744598 - 32744532
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||| ||||||| |||||||||  ||| |||||||||||||||||| || |||||||||||||||    
T  32744598 gagattgaaaaaatgggtagaaatta--gtttgttctttgtgagcttgtttaagctaatttcttgtaac 32744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37408452 - 37408536
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| || ||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  37408452 tgttcattggtgagattgggaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 37408536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41819697 - 41819617
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| || |||||||||||||  || |||||||||||||||||    
T  41819697 tgttcattggtgagattgggaaaatgggtagaaattagggttgttt-tttgtgagcttgtctaagctaatttcttgtaaccc 41819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 1683483 - 1683546
Alignment:
Q  13 agattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgta 77  Q
    ||||||||||||||||||||||||| ||| |||||| | |||||| ||||  |||||||||||||    
T  1683483 agattgagaaaatggtagaaattaa-gttcgttcttcgagagcttattgatgctaatttcttgta 1683546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 4569957 - 4570024
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| ||||| ||| |||||||||| ||||| |||||||||||||||    
T  4569957 gagattgggaaaatgggtagaaattagggttg-ttcattgtgagcttattgaagctaatttcttgtaac 4570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 5258297 - 5258234
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  5258297 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5258234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 5260476 - 5260413
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  5260476 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5260413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23200291 - 23200228
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||||  |||| |||||||||| |||||  || |||||||||||||||||||||    
T  23200291 aaaatggtagaaattagagttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 23200228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 39153524 - 39153457
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| |||| |||| ||||||||||||| || |||||||||||||||    
T  39153524 gagattgggaaaatgggtagaaatta-ggtttgttcattgtgagcttgtttaagctaatttcttgtaac 39153457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 9581302 - 9581356
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| |||| |||||||||||||||||| || |||||||||| ||||||    
T  9581302 ggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttttaaccc 9581356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 23392081 - 23392003
Alignment:
Q  3 ttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||| ||| ||| ||||||| |||||||||||| ||| ||||||||||||||||| ||  ||||||||||||||||    
T  23392081 ttcattggtgagtttgggaaaatgagtagaaattaagtttg-ttctttgtgagcttgtttaagataatttcttgtaaccc 23392003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 35138869 - 35138762
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||  ||||||||||| | ||| ||||| ||||| ||||||||  |||||||||| ||| ||||| ||       |||||||||||||||    
T  35138869 agagattgagaaatgggtagaaattatgtttg-ttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattg 35138771  T
Q  111 atattggat 119  Q
    ||| |||||    
T  35138770 atagtggat 35138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36018846 - 36018924
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| || |||| |||||||| | ||||||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  36018846 tgttcattggtgaaattgggaaaatgggttgaaattagggttg-ttctttgtgagcttgttgaagttaatttcttgtaac 36018924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 53921677 - 53921599
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||  ||||||| ||||||||| |||| ||| |||||||||||||| || |||||||||||||||    
T  53921677 tgttcattggtgagattggaaaaatgggtagaaatta-ggtttgttgtttgtgagcttgttaaagctaatttcttgtaac 53921599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 29682364 - 29682433
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| | ||| ||||||||||||||||| || |||||||||||| ||||    
T  29682364 gagattgggaaaatgggtagaaattatgtttg-ttctttgtgagcttgtttaagctaatttcttgtcaccc 29682433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 29810904 - 29810942
Alignment:
Q  43 gttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  29810904 gttctttgtgaacttgttgaagctaatttcttgtaaccc 29810942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 801096 - 801168
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||| |||||    
T  801096 gagattgggaaaagggtagaaattagggtt-gttcattgtgaacttgtcaaatctaatttcttgtaactctttt 801168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 51398834 - 51398886
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||| ||||| ||||| |||| ||||||||| |||||||||||||||    
T  51398834 ggtagaaattagggttg-ttcttagtgaacttgttgaagctaatttcttgtaac 51398886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 6716505 - 6716572
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  6716505 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 6716572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 7780166 - 7780099
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  7780166 gagattgggaaaagggtagaaattagggtt-gttcattgtgaacttgtcaaatctaatttcttgtaacc 7780099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23198092 - 23198029
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||||  |||| || ||||||| |||||  || |||||||||||||||||||||    
T  23198092 aaaatggtagaaattagagttgttt-tttgtgaacttgtcaaagctaatttcttgtaaccctttt 23198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 54635130 - 54635197
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  54635130 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 54635197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18655394 - 18655474
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18655394 tgttcattggtgagattgagaaaatgggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 18655474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1822286 - 1822373
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||||| | |||||||||  |||| | ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1822286 tgttcatttgagagattgcaaaaaggatagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttata 1822373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1856731 - 1856818
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||||| | |||||||||  |||| | ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1856731 tgttcatttgagagattgcaaaaaggatagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttata 1856818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19491873 - 19491793
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  19491873 tgttcattggtgagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaaactaatttcttgtaaccc 19491793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30291600 - 30291679
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||||| ||||||||| | || ||||||||||||||||||||| |||||||||||||||    
T  30291600 tgttcattggtgagattgagaaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaac 30291679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27811272 - 27811352
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  27811272 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 27811352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 1292626 - 1292559
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  1292626 gagattgagaaaatgggtagaaattaagtttg-ttctttgtgagcttgttgaagctaatttcttgtaac 1292559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8965865 - 8965778
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    |||||| ||| ||||||| ||||| ||||||||||| |||| ||||||| |||| ||||||||  ||||||||| |||||||||||||    
T  8965865 tgttcattggtgagattgggaaaaaggtagaaattagggtttgttctttatgagtttgttgaagttaatttcttataacccttttata 8965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 12702787 - 12702657
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||||||| |        || ||||||||||||||||||||||    
T  12702787 aaaagggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctctttgt-aagaactcattgatattggatt 12702690  T
Q  121 gtagggatcagtcttttacctagagtaggtcaa 153  Q
    | || ||||| ||| |  |||||| ||||||||    
T  12702689 ggagagatcaatctctcccctagattaggtcaa 12702657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 40221765 - 40221819
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  40221765 ggtagaaattagggttg-ttctttgtgagcttgttgaaactaatttcttgtaaccc 40221819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 11712165 - 11712046
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    |||||||||||||||  || |||||| | || |||| ||| |||||||||||| ||||||||||| ||||||||||||       ||||| |||||||||    
T  11712165 agagattgagaaaataatataaattaggttttgttccttgagagcttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattg 11712066  T
Q  111 atattggattgtagggatca 130  Q
    ||| ||||||| || |||||    
T  11712065 atagtggattgaagagatca 11712046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43036417 - 43036494
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  43036417 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaaactaatttcttgtaa 43036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4283518 - 4283598
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| || ||||||||||||||||| |||||||||||||||||    
T  4283518 tgttcattggtgagattgggaaaatgggtagaaattagggttgttt-tttgtgagcttgttgaagctaatttcttgtaaccc 4283598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4731652 - 4731732
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| | |||||||||||||||||| |||||||||||||||||    
T  4731652 tgttcattggtgagattgggaaaatgggtagaaattagggttgct-ctttgtgagcttgttgaacctaatttcttgtaaccc 4731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15212780 - 15212860
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  15212780 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 15212860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18141815 - 18141894
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  18141815 tgttcattggtgagattgtgaaaatgggtagaaatta-ggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 18141894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 30143346 - 30143414
Alignment:
Q  13 agattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  30143346 agattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 30143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42435165 - 42435085
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  42435165 tgttcattggtgagattggaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 42435085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 40328784 - 40328851
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  40328784 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaaactaatttcttgtaac 40328851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 42498209 - 42498272
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  42498209 aaaaaggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccctttt 42498272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 34256680 - 34256530
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaa 100  Q
    |||||| ||| |||||||  |||||||||||||||| ||||| |||||||||| |||||  ||  |||||||||||||||||||| ||       || ||    
T  34256680 tgttcattggtgagattggaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgt-aa 34256583  T
Q  101 gaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaa 153  Q
    ||||||||||||| ||||||| || ||||| ||| |   ||||||||||||||    
T  34256582 gaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaa 34256530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 41266973 - 41267047
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||||||||||||| | || |||||| | || |||||||| |||||||||||||||| |||||    
T  41266973 agagtttgagaaaatggtagaaattaggttttgttcttagagaacttgttgagactaatttcttgtaactctttt 41267047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 10930362 - 10930286
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttata 88  Q
    ||||||| |||||||| ||||||||| ||||| | ||||||||||| |||||| ||||||||||||||||| ||||||    
T  10930362 gagattgggaaaatggatagaaattagggttgct-ctttgtgagctcgttgaagctaatttcttgtaacccatttata 10930286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33352144 - 33352224
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| || |||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  33352144 tgttcattggtgagattgggaaaatgggtaaaaattagggttg-ttctttgtgaacttgttgaacctaatttcttgtaaccc 33352224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 3303833 - 3303766
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||||| ||| ||||||||||||||||| || |||||||||||||||    
T  3303833 gagattgggaaaatgggtagaaattaagtttg-ttctttgtgagcttgtttaacctaatttcttgtaac 3303766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 10240175 - 10240227
Alignment:
Q  28 tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||||  |||| ||||||||||||||||||||| ||||||||||||||||    
T  10240175 tagaaatttgggtttgttctttgtgagcttgttgaatctaatttcttgtaacc 10240227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31218272 - 31218335
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  31218272 aaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 31218335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34254504 - 34254421
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| ||||||||||| ||||| |||||||||| |||||  ||  ||||||||||||||||||||    
T  34254504 tgttcattggtgagattgggaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagttaatttcttgtaaccctttt 34254421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 44353798 - 44353865
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||    
T  44353798 gagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaac 44353865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3772186 - 3772264
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||| | ||||||||| |||| ||||||||||||||| || || |||||||||||||||    
T  3772186 tgttcattggtgagattgagaaaattgatagaaatta-ggtttgttctttgtgagcttatttaagctaatttcttgtaac 3772264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 1345534 - 1345465
Alignment:
Q  12 gagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| ||||||| |||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||    
T  1345534 gagattgggaaaatgtgtagaaattagggttg-ttctttgtgagtttattgaagctaatttcttgtaaccc 1345465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 3231960 - 3231886
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||  |||||||||| | || |||||| |||||||||||||| ||||||| || ||||| ||||    
T  3231960 agagattgagaaaaatgtagaaattaggctttgttcttcgtgagcttgttgaagctaattttttttaaccatttt 3231886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 6598977 - 6599046
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||||| ||| ||||||| ||||||||| || |||||||||||||||||    
T  6598977 gagattgggaaaatgggtagaaattaagtttg-ttctttgcgagcttgtttaagctaatttcttgtaaccc 6599046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 6674430 - 6674499
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||||| ||| ||||||| ||||||||| || |||||||||||||||||    
T  6674430 gagattgggaaaatgggtagaaattaagtttg-ttctttgcgagcttgtttaagctaatttcttgtaaccc 6674499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 10929819 - 10929876
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttt 84  Q
    ||||||||||| | ||| |||||||||||||||||||| ||||||||||||||| ||||    
T  10929819 ggtagaaattatgtttg-ttctttgtgagcttgttgaagctaatttcttgtaactcttt 10929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 40321085 - 40321154
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| ||| ||||||||||||||||  ||||||||||||||||    
T  40321085 gagattgggaaaatgggtagaaattagggttg-ttcattgtgagcttgttgaagttaatttcttgtaaccc 40321154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9765739 - 9765819
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||   || |||||||||||||||||    
T  9765739 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttggcaaagctaatttcttgtaaccc 9765819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 11384005 - 11384057
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||    
T  11384005 ggtagaaattagggttg-ttctttgtgagtttgttgaagctaatttcttgtaac 11384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 1746371 - 1746308
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  1746371 aaaaaggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 1746308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 41365010 - 41364943
Alignment:
Q  12 gagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||| ||||| || |||||||||||||||    
T  41365010 gagattgggaaaattggtagaaatta-ggtttgttctttgtgagtttgtttaagctaatttcttgtaac 41364943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 44303870 - 44303933
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||||||||| |||||||||| |||||  || |||||||||||||| ||||||    
T  44303870 aaaagggtagaaattaaggttg-ttctttgtgaacttgtcaaagctaatttcttgtaatcctttt 44303933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5689291 - 5689345
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||||| ||| ||||||||||||||  || |||||||||||||||||    
T  5689291 ggtagaaattaaggt-ggtgctttgtgagcttgtcaaagctaatttcttgtaaccc 5689345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 12632848 - 12632818
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggtt 41  Q
    |||||||||||||||||||||||||||||||    
T  12632848 agagattgagaaaatggtagaaattaaggtt 12632818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 28470878 - 28470935
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaa-ctaatttcttgta 77  Q
    |||||||||||||||| |||| | |||| | ||||||||||||| |||||||||||||    
T  28470878 aaaatggtagaaattagggtttgctcttagagagcttgttgaaagctaatttcttgta 28470935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 41366777 - 41366709
Alignment:
Q  12 gagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||||||||||| |||||||||| | ||| ||||||||| |||||||| || |||||||||| |||||    
T  41366777 gagattgagaaaatgggtagaaatt-atgtttgttctttgtaagcttgtttaagctaatttcttttaacc 41366709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8153758 - 8153798
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggtt 41  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  8153758 tgttcattggtgagattgagaaaatggtagaaattagggtt 8153798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 10015113 - 10015153
Alignment:
Q  39 gttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||| |||||||| |||||||||| |||||||||||||||    
T  10015113 gttgggtctttgtgtgcttgttgaagctaatttcttgtaac 10015153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 17982668 - 17982731
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  ||  ||||||||||||||||||||    
T  17982668 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagttaatttcttgtaaccctttt 17982731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 18106210 - 18106174
Alignment:
Q  43 gttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||| |||||||||||| |||||||||||||||    
T  18106210 gttctttgcgagcttgttgaagctaatttcttgtaac 18106174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 25689960 - 25690027
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  25689960 gagattgggaaaaaggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 25690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 29796486 - 29796418
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||| |||||  |||||||| |||||| |||||| | || ||||||||| || ||||||||||||    
T  29796486 agagattgggaaaagagtagaaatcaaggtttgttcttggagaacttgttgaagctgatttcttgtaac 29796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 22079321 - 22079439
Alignment:
Q  11 agagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    ||||||||  |||||||||||||||| | ||| ||||||||||||||||| || |||||||||||||||| |||| ||       |||||||||||||||    
T  22079321 agagattggaaaaatggtagaaattatgtttg-ttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattg 22079419  T
Q  111 atattggattgtagggatca 130  Q
    ||||||||||| || |||||    
T  22079420 atattggattggagagatca 22079439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41360908 - 41360988
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  41360908 tgttcattggtgagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgttgaaactaatttcttgtaaccc 41360988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 928130 - 928066
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  928130 aaaatgatagaaattagggtttgttctttgtgagcttgttgaagctaatttcttgtaaccctttt 928066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3156859 - 3156939
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  3156859 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 3156939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 3460710 - 3460847
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||| |||||||||||  ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||       |||||||||  ||||||| | ||||    
T  3460710 aaaagggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtcgatt 3460809  T
Q  121 gtagggatcagtcttttacctagagtaggtcaatttaga 159  Q
    | || ||||| | | || |||||||||||||||||||||    
T  3460810 ggagagatcaatatctt-cctagagtaggtcaatttaga 3460847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4552811 - 4552731
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| |||| || |||||||||||||||||| |||||||||||||||||    
T  4552811 tgttcattggtgagattgagaaaatgggtagaaatta-ggtttgtcctttgtgagcttgttgaagctaatttcttgtaaccc 4552731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11348692 - 11348772
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  11348692 tgttcattggtgagattgggaaaattggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 11348772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 49918344 - 49918424
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  49918344 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 49918424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37282865 - 37282782
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| |||||||||||| ||||||||| |||||| |||| |||| |||||||||||||||| ||||||| | |||||||||||    
T  37282865 tgttcattggagagattga-aaaatggtataaattagggtttgttccttgtgagcttgttgaagctaatttatggtaaccctttt 37282782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37879085 - 37879006
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  37879085 tgttcattggtgagattgggaaaataggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaacc 37879006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10925217 - 10925295
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10925217 tgttcattggtgagattgaaaaaatggatagaaattatggttg-ttctttgtgagcttgttgaagctaatttcttgtaac 10925295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44455154 - 44455232
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  44455154 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgaacttgttgaaactaatttcttgtaac 44455232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19754488 - 19754568
Alignment:
Q  1 tgttcactggagagattgagaaaat--ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| |||||||||||||   ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  19754488 tgttcattggtgagattgagaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaacc 19754568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37033247 - 37033170
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  37033247 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaa 37033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8871203 - 8871138
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||||||||||||| |||| |||||||||||| | |||||| |||||||||||||||| ||||    
T  8871203 gaaaatggtagaaattagggtttgttctttgtgagttcgttgaagctaatttcttgtaaccatttt 8871138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13547263 - 13547183
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||    
T  13547263 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctattttcttgtaaccc 13547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28265728 - 28265648
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||    
T  28265728 tgttcattggcgagattgggaaaataggtagaaattagggttg-ttcattgtgagcttgttgaagctaatttcttgtaaccc 28265648  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29136241 - 29136321
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||    
T  29136241 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttggaaccc 29136321  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34603570 - 34603650
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||| ||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  34603570 tgttcattggtgagattgaaaaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 34603650  T

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Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37168291 - 37168371
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  37168291 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 37168371  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47115165 - 47115245
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  47115165 tgttcattggtgagattgggaaaattggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 47115245  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47255514 - 47255434
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  47255514 tgttcattggtgagattggaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 47255434  T

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Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 193605 - 193683
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||||||||||| ||||||||| ||||| |||||| | ||||||||||| |||||||||||||||    
T  193605 tgttcattggtgagattgagaaaatgggtagaaattagggttg-ttctttattagcttgttgaagctaatttcttgtaac 193683  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 2263106 - 2263014
Alignment:
Q  44 ttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagggatcagtcttt 136  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||       |||||||||| ||||||| ||||||| || ||||| |||||    
T  2263106 ttcttggtgagcttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatcttt 2263014  T

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Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42298149 - 42298071
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||| || ||||||||||||||||| |||||||||||||||    
T  42298149 tgttcattggtgagattgggaaaattggtagaaattagggttgttt-tttgtgagcttgttgaagctaatttcttgtaac 42298071  T

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Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45644529 - 45644454
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttg 75  Q
    |||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||||||  || |||||||||||    
T  45644529 tgttcattggtgagattgagaaaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttg 45644454  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 834330 - 834261
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  834330 gagattgggaaaatggatagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 834261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44650337 - 44650182
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaa 100  Q
    |||||| |||||||||||||||||  ||| |||||| |||| |||||||||||| ||||| |  ||||||| ||||||  ||||||||       |||||    
T  44650337 tgttcattggagagattgagaaaaatgtaaaaattatggtttgttctttgtgagtttgttaacgctaatttattgtaaatcttttatatctctttgtaaa 44650238  T
Q  101 gaactcattgatattggattgtagggatcagtcttttacctagagtaggtcaattt 156  Q
     || ||||| ||| ||||||| || ||||| ||| || || | |||||||||||||    
T  44650237 taattcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaattt 44650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7482405 - 7482325
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| | |||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||    
T  7482405 tgttcattggtgagattgggtaaatgggtagaaattagggttg-ttctttgtgagcttgtttaagctaatttcttgtaaccc 7482325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13549174 - 13549094
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||    
T  13549174 tgttcattggtgagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttaaacctaatttcatgtaaccc 13549094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19752679 - 19752759
Alignment:
Q  1 tgttcactggagagattgag-aaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| ||||||||| ||||||| ||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  19752679 tgttcattggtgagattgagtaaaatgggtagaaattagggttg-ttctttgcgagcttgttgaagctaatttcttgtaacc 19752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31659232 - 31659312
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||| || || |||||||||||||||||||| |||||||||||||||||    
T  31659232 tgttcattggtgagattggaaaaatgggtagaaattagggctg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 31659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 197071 - 197004
Alignment:
Q  12 gagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||  ||||||||||||||    
T  197071 gagattgagaaaattggtagaaattagggttg-ttctttgtgagcttgtttaagttaatttcttgtaac 197004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 8550950 - 8550883
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||||| || |||||||||||||||    
T  8550950 gagattgggaaaatgggtagaaatta-ggtttgttctttgtgagcttgtttaagctaatttcttgtaac 8550883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37503728 - 37503649
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||| ||| ||||||| |||||||| || |||||| ||||| |||||||||| ||||||||| ||||||||||||||||    
T  37503728 tgttcattggtgagattgggaaaatgggtaaaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaacc 37503649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20762665 - 20762750
Alignment:
Q  1 tgttcactggagagattgagaaaat--ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| |||||||||||||   ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  20762665 tgttcattggtgagattgagaaaaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 20762750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 28220374 - 28220320
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  28220374 ggtagaaattagggttg-ttctttgtgaacttgttgaagctaatttcttgtaaccc 28220320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 13138108 - 13138070
Alignment:
Q  43 gttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  13138108 gttctttgtgagcttgttgaagctaatttcttgtaaccc 13138070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 15820337 - 15820379
Alignment:
Q  37 aggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  15820337 aggtttgttctttgtgagcttgttgaagctaatttcttgtaac 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 31925855 - 31925730
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagg 125  Q
    ||||||||||| || || ||| |||||||||||||||| ||||||||||||||||| ||| ||       || ||||||||||||||| ||||||| ||     
T  31925855 ggtagaaattagggatg-ttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggaga 31925758  T
Q  126 gatcagtcttttacctagagtaggtcaa 153  Q
    ||||| ||| |   ||||||||||||||    
T  31925757 gatcaatctctcctctagagtaggtcaa 31925730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 23555413 - 23555361
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  23555413 ggtagaaattagggttg-ttctttgtgaacttgttgaaactaatttcttataac 23555361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28223595 - 28223515
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| |||||||| ||||||||| ||||| | |||| ||| ||||||||| |||||||||||||||||    
T  28223595 tgttcattggtgagattgggaaaatgggtagaaattatggttgat-ctttctgaacttgttgaagctaatttcttgtaaccc 28223515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44646958 - 44646881
Alignment:
Q  1 tgttcactggagagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaa 78  Q
    |||||| |||||||||||||||||  ||| |||||| |||| |||||||||||| ||||| |  ||||||| ||||||    
T  44646958 tgttcattggagagattgagaaaaatgtaaaaattatggtttgttctttgtgagtttgttaacgctaatttattgtaa 44646881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 13316505 - 13316442
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  13316505 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 13316442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 36683695 - 36683762
Alignment:
Q  12 gagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||| ||||||||||| ||||  ||||||||||| |||||||| |||||||||||||||    
T  36683695 gagattgggaaaataggtagaaatta-ggtttattctttgtgagtttgttgaagctaatttcttgtaac 36683762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 40282382 - 40282450
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  40282382 gagattgggaaaagggtagaaattagggttagttcattgtgaacttgtctaatctaatttcttgtaacc 40282450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 46064923 - 46064990
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||| |||||||| || |||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  46064923 gagattgggaaaatggataaaaatta-ggtttgttctttgtgagctcgttgaagctaatttcttgtaac 46064990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 3189345 - 3189475
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||| |||||||| |||||| ||||| ||       || ||||||||||||||| ||||||    
T  3189345 aaaagggtataaattagggttg-ttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggatt 3189442  T
Q  121 gtagggatcagtcttttacctagagtaggtcaa 153  Q
    | || ||||| ||| | | | ||||||||||||    
T  3189443 ggagagatcaatctctcatccagagtaggtcaa 3189475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 3198162 - 3198292
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||| |||||||| |||||| ||||| ||       || ||||||||||||||| ||||||    
T  3198162 aaaagggtataaattagggttg-ttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggatt 3198259  T
Q  121 gtagggatcagtcttttacctagagtaggtcaa 153  Q
    | || ||||| ||| | | | ||||||||||||    
T  3198260 ggagagatcaatctctcatccagagtaggtcaa 3198292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 3207001 - 3207131
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggatt 120  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||| |||||||| |||||| ||||| ||       || ||||||||||||||| ||||||    
T  3207001 aaaagggtataaattagggttg-ttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgatagtggatt 3207098  T
Q  121 gtagggatcagtcttttacctagagtaggtcaa 153  Q
    | || ||||| ||| | | | ||||||||||||    
T  3207099 ggagagatcaatctctcatccagagtaggtcaa 3207131  T

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Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 35109494 - 35109546
Alignment:
Q  26 ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    |||||||||||||||| ||||||||||||||  || || ||||||||||||||||    
T  35109494 ggtagaaattaaggtttgttctttgtgagct--tttaagctaatttcttgtaacc 35109546  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50169384 - 50169306
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||||||  ||||||| ||||||||| ||||| ||||||||||||||||  || |||||||||||||||    
T  50169384 tgttcattggtgagattggaaaaatgggtagaaattagggttg-ttctttgtgagcttgtcaaagctaatttcttgtaac 50169306  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 13659499 - 13659382
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    ||||||| ||||| || ||||||||| ||||| || ||||| ||||||||||| |||||||||||| |||| ||||||       || ||||||||||||    
T  13659499 gagattgggaaaacggatagaaattagggttgttt-tttgtaagcttgttgaagctaatttcttgttacccatttatatctctttgt-aagaactcattg 13659402  T
Q  111 atattggattgtagggatca 130  Q
    ||| ||||||| || |||||    
T  13659401 atagtggattggagagatca 13659382  T

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Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37560043 - 37559962
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaa-ctaatttcttgtaaccc 81  Q
    |||||| ||| ||||||  |||||||| |||||||||  |||| |||||||||| |||||||||| |||||||||||||||||    
T  37560043 tgttcattggtgagattaggaaaatgggtagaaattagagttg-ttctttgtgaacttgttgaaagctaatttcttgtaaccc 37559962  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 9109582 - 9109510
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||||| |||||||||| ||  | ||| | || |||||||||  ||||||||||||||||||||    
T  9109582 gagattgagaaaatggaagaaattaagtttt-tacttggagaacttgttgaagttaatttcttgtaaccctttt 9109510  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50167349 - 50167269
Alignment:
Q  1 tgttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| ||||||| ||||||  |||||||||| ||||| || |||||||||||||  || |||||||||||||||||    
T  50167349 tgttcattggtgagattgggaaaattagtagaaattagggttg-ttatttgtgagcttgtcaaagctaatttcttgtaaccc 50167269  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 6808482 - 6808575
Alignment:
Q  37 aggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgatattggattgtagggatca 130  Q
    ||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||       |||||||||||||| ||| ||||||| || |||||    
T  6808482 aggtttgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatca 6808575  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 9036422 - 9036489
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||| | || ||||||||||||||||    
T  9036422 gagattgggaaaagggtagaaattagggtttgttcattgtgaacttg-tcaagctaatttcttgtaacc 9036489  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 20622401 - 20622334
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacc 80  Q
    ||||||| ||||| ||||||||||| |||| |||| |||||| |||||  || ||||||||||||||||    
T  20622401 gagattgggaaaagggtagaaattagggtt-gttcattgtgaacttgtcaaatctaatttcttgtaacc 20622334  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 25652095 - 25652158
Alignment:
Q  15 attgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    ||||||||| ||||||||||||||  || || |||| ||| |||||||| |||||||||||||||    
T  25652095 attgagaaattggtagaaattaagtgtg-ttatttgagagtttgttgaagctaatttcttgtaac 25652158  T

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Target: scaffold0466 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7321 - 7401
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||||| ||| |||||||  ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  7321 tgttcattggtgagattggaaaaatgggtagaaattaaggttg-ttctttgtgagcttgttgaagctaatttcttgtaaccc 7401  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 490483 - 490411
Alignment:
Q  12 gagattgagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||||||||||| |||||||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||||    
T  490483 gagattgagaaaatcgtagaaattaagtttg-ttcttggagagcttgttgaagctaatttcttgtaactctttt 490411  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 434548 - 434611
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  434548 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 434611  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 80446 - 80377
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||    
T  80446 gagattgggaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttcttgcaaccc 80377  T

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Target: scaffold0491 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 11318 - 11252
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  11318 gagaaaagggtagaaattagggttg-ttctttgtgaacttgtaaaatctaatttcttgtaaccctttt 11252  T

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Target: scaffold0491; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8892 - 8826
Alignment:
Q  18 gagaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    ||||||| ||||||||||| ||||| |||||||||| ||| |  || |||||||||||||||||||||    
T  8892 gagaaaagggtagaaattagggttg-ttctttgtgaacttataaaatctaatttcttgtaaccctttt 8826  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18177 - 18099
Alignment:
Q  1 tgttcactggagagattgagaaaat-ggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| |||| || |||||| ||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||    
T  18177 tgttcattggtgagagtgggaaaattggtagaaattagggttg-ttcattgtgagcttgttgaagctaatttcttgtaac 18099  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 114596 - 114680
Alignment:
Q  1 tgttcactggagagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||||| ||| ||||||| ||||| || ||||||||||||||| |||||||||| |||||  || ||||||||||||||| |||||    
T  114596 tgttcattggtgagattgggaaaaagggtagaaattaaggttg-ttctttgtgaacttgtcaaagctaatttcttgtaacgctttt 114680  T

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Target: scaffold1519 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 931 - 994
Alignment:
Q  21 aaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccctttt 85  Q
    |||| ||||||||||| ||||| |||||||||| |||||  || |||||||||||||||||||||    
T  931 aaaagggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11551 - 11629
Alignment:
Q  1 tgttcactggagagattgagaaaa-tggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaac 79  Q
    |||||| ||| ||||||| ||||| |||||||||||| ||||| |||||||||| |||||  || |||||||||||||||    
T  11551 tgttcattggtgagattgggaaaaatggtagaaattagggttg-ttctttgtgaacttgtcaaagctaatttcttgtaac 11629  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 20587 - 20509
Alignment:
Q  3 ttcactggagagattgagaaaatg-gtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaaccc 81  Q
    |||| ||| ||||||| ||||||| | |||||||| |||| ||| ||||||| ||||||||| |||||||||||||||||    
T  20587 ttcattggtgagattgggaaaatgagcagaaatta-ggtttgttttttgtgaacttgttgaagctaatttcttgtaaccc 20509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 149260 - 149143
Alignment:
Q  12 gagattgagaaaatgg-tagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattg 110  Q
    ||||||| ||||| || ||||||||| ||||| || ||||| ||||||||||| |||||||||||| |||| ||||||       || ||||||||||||    
T  149260 gagattgggaaaacggatagaaattagggttgttt-tttgtaagcttgttgaagctaatttcttgttacccatttatatctctttgt-aagaactcattg 149163  T
Q  111 atattggattgtagggatca 130  Q
    ||| ||||||| || |||||    
T  149162 atagtggattggagagatca 149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 25067 - 25159
Alignment:
Q  20 gaaaatggtagaaattaaggttggttctttgtgagcttgttgaaactaatttcttgtaacccttttatannnnnnngtaaagaactcattgata 113  Q
    |||||||||||||| || | || |||||||| ||| ||||||||  ||||||||||||||| |||| ||       ||||||||||||||||||    
T  25067 gaaaatggtagaaacta-gttttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgata 25159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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