View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10057_low_15 (Length: 226)

Name: NF10057_low_15
Description: NF10057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10057_low_15
NF10057_low_15
[»] chr1 (61 HSPs)
chr1 (3-136)||(31919049-31919182)
chr1 (3-136)||(14872700-14872832)
chr1 (9-136)||(5983903-5984029)
chr1 (9-128)||(21947525-21947643)
chr1 (10-136)||(34878177-34878302)
chr1 (3-136)||(10776360-10776492)
chr1 (9-133)||(44915706-44915829)
chr1 (11-134)||(15431567-15431689)
chr1 (3-136)||(7836695-7836827)
chr1 (38-136)||(4413210-4413307)
chr1 (10-136)||(23291541-23291666)
chr1 (28-136)||(31984247-31984354)
chr1 (9-139)||(45415625-45415754)
chr1 (11-136)||(3228338-3228462)
chr1 (27-136)||(16989456-16989564)
chr1 (9-136)||(7337562-7337688)
chr1 (9-136)||(29738563-29738689)
chr1 (12-139)||(32873760-32873886)
chr1 (9-136)||(35484290-35484416)
chr1 (12-127)||(51916575-51916687)
chr1 (12-149)||(36775596-36775732)
chr1 (9-129)||(8211817-8211935)
chr1 (12-136)||(24583020-24583143)
chr1 (9-136)||(32395065-32395191)
chr1 (12-139)||(49626983-49627109)
chr1 (14-136)||(44543344-44543465)
chr1 (16-149)||(13144698-13144830)
chr1 (12-136)||(48750255-48750378)
chr1 (10-119)||(1742349-1742455)
chr1 (27-136)||(31317821-31317929)
chr1 (16-136)||(45789615-45789734)
chr1 (3-149)||(39888243-39888388)
chr1 (3-136)||(27580027-27580159)
chr1 (11-106)||(35461978-35462072)
chr1 (9-136)||(49504494-49504620)
chr1 (75-136)||(11462381-11462441)
chr1 (12-136)||(18939389-18939513)
chr1 (12-149)||(19060979-19061115)
chr1 (3-48)||(27456601-27456646)
chr1 (28-136)||(15492373-15492480)
chr1 (12-136)||(25564068-25564191)
chr1 (27-71)||(43412459-43412503)
chr1 (92-136)||(51373757-51373801)
chr1 (13-72)||(16262932-16262991)
chr1 (92-139)||(21687527-21687574)
chr1 (12-71)||(24597287-24597346)
chr1 (18-89)||(26535425-26535496)
chr1 (31-149)||(9341815-9341932)
chr1 (95-136)||(24583298-24583339)
chr1 (92-136)||(5856058-5856102)
chr1 (92-136)||(19596359-19596403)
chr1 (92-136)||(41903899-41903943)
chr1 (12-71)||(37720112-37720171)
chr1 (92-141)||(16161977-16162026)
chr1 (107-136)||(27456648-27456677)
chr1 (26-59)||(31836898-31836931)
chr1 (92-136)||(799730-799773)
chr1 (92-136)||(6217722-6217766)
chr1 (92-136)||(12635319-12635363)
chr1 (92-136)||(14489421-14489465)
chr1 (26-62)||(40646765-40646801)
[»] chr2 (72 HSPs)
chr2 (113-226)||(13718992-13719103)
chr2 (3-149)||(8809348-8809492)
chr2 (3-149)||(4904032-4904177)
chr2 (3-136)||(33923773-33923905)
chr2 (9-136)||(1421750-1421876)
chr2 (9-139)||(4778827-4778956)
chr2 (3-136)||(19028814-19028946)
chr2 (11-136)||(31788532-31788656)
chr2 (10-136)||(18763543-18763668)
chr2 (11-124)||(31128692-31128804)
chr2 (9-136)||(7646547-7646678)
chr2 (13-149)||(11985120-11985255)
chr2 (10-136)||(1415632-1415757)
chr2 (3-136)||(36691942-36692074)
chr2 (9-136)||(5427769-5427894)
chr2 (9-136)||(9169158-9169284)
chr2 (9-136)||(29279470-29279596)
chr2 (16-136)||(33585635-33585754)
chr2 (9-136)||(7677773-7677899)
chr2 (9-136)||(25508968-25509094)
chr2 (9-136)||(27097307-27097432)
chr2 (9-136)||(37876506-37876632)
chr2 (9-136)||(38445240-38445366)
chr2 (14-136)||(12677351-12677471)
chr2 (27-136)||(43397018-43397127)
chr2 (9-110)||(7448321-7448421)
chr2 (12-136)||(10237116-10237239)
chr2 (12-136)||(12554081-12554204)
chr2 (12-136)||(17249047-17249170)
chr2 (9-136)||(19062247-19062378)
chr2 (12-136)||(41694698-41694821)
chr2 (27-141)||(14955621-14955734)
chr2 (9-138)||(31210505-31210633)
chr2 (12-136)||(3309022-3309145)
chr2 (9-141)||(4041489-4041620)
chr2 (12-129)||(30399936-30400058)
chr2 (12-149)||(32448503-32448642)
chr2 (12-136)||(17151500-17151624)
chr2 (12-136)||(33760093-33760216)
chr2 (9-137)||(36943021-36943147)
chr2 (12-139)||(29574525-29574651)
chr2 (16-136)||(29173617-29173739)
chr2 (3-111)||(39310778-39310884)
chr2 (49-136)||(22538207-22538293)
chr2 (22-136)||(37994371-37994484)
chr2 (12-136)||(10929742-10929865)
chr2 (92-136)||(28533854-28533898)
chr2 (22-129)||(17994637-17994743)
chr2 (93-136)||(19597996-19598039)
chr2 (96-143)||(42577268-42577315)
chr2 (9-136)||(4100419-4100536)
chr2 (28-141)||(18695147-18695259)
chr2 (27-136)||(24461535-24461643)
chr2 (9-136)||(35220399-35220528)
chr2 (92-129)||(37416866-37416903)
chr2 (92-136)||(6358781-6358825)
chr2 (93-128)||(4264629-4264664)
chr2 (3-62)||(42698674-42698733)
chr2 (27-65)||(3725272-3725310)
chr2 (12-86)||(28871737-28871811)
chr2 (95-141)||(41327898-41327944)
chr2 (27-68)||(25087129-25087170)
chr2 (92-149)||(34128571-34128628)
chr2 (14-62)||(11833556-11833604)
chr2 (92-136)||(16376095-16376139)
chr2 (92-136)||(21612394-21612437)
chr2 (92-136)||(23933519-23933563)
chr2 (27-63)||(27949518-27949554)
chr2 (26-62)||(30420769-30420805)
chr2 (26-62)||(36234099-36234135)
chr2 (26-62)||(38293640-38293676)
chr2 (26-62)||(38575439-38575475)
[»] chr5 (43 HSPs)
chr5 (3-141)||(41630559-41630696)
chr5 (9-136)||(38597860-38597986)
chr5 (9-136)||(13007292-13007418)
chr5 (10-149)||(31391639-31391777)
chr5 (9-136)||(34945456-34945582)
chr5 (10-136)||(35850863-35850988)
chr5 (9-136)||(9113624-9113750)
chr5 (9-136)||(24229683-24229809)
chr5 (3-128)||(7930234-7930358)
chr5 (16-136)||(14082295-14082414)
chr5 (12-139)||(19120978-19121104)
chr5 (3-149)||(26877995-26878139)
chr5 (12-136)||(28540805-28540928)
chr5 (9-136)||(26825493-26825619)
chr5 (3-149)||(13421990-13422135)
chr5 (10-124)||(14726372-14726485)
chr5 (3-136)||(1409555-1409687)
chr5 (9-136)||(6216961-6217088)
chr5 (10-149)||(11976821-11976959)
chr5 (9-136)||(25980221-25980346)
chr5 (10-136)||(38007422-38007546)
chr5 (3-136)||(10722818-10722950)
chr5 (27-136)||(35920895-35921003)
chr5 (21-136)||(15571561-15571676)
chr5 (9-136)||(6012037-6012163)
chr5 (10-136)||(8096397-8096521)
chr5 (12-149)||(2979192-2979328)
chr5 (12-136)||(19103366-19103489)
chr5 (12-135)||(39567336-39567458)
chr5 (3-136)||(7036276-7036408)
chr5 (47-149)||(11867750-11867851)
chr5 (27-136)||(37986012-37986120)
chr5 (12-136)||(8088111-8088234)
chr5 (12-136)||(14211293-14211416)
chr5 (27-65)||(2057789-2057827)
chr5 (92-136)||(8514551-8514595)
chr5 (92-136)||(31078318-31078362)
chr5 (92-127)||(19100527-19100562)
chr5 (27-149)||(13468689-13468810)
chr5 (27-68)||(781478-781519)
chr5 (27-68)||(35475286-35475327)
chr5 (92-136)||(9762352-9762396)
chr5 (27-63)||(19259765-19259801)
[»] chr4 (67 HSPs)
chr4 (9-136)||(56040545-56040671)
chr4 (9-136)||(21662521-21662647)
chr4 (9-136)||(21671285-21671411)
chr4 (9-136)||(53811112-53811238)
chr4 (3-139)||(43095706-43095841)
chr4 (9-128)||(4142659-4142777)
chr4 (9-136)||(22611267-22611393)
chr4 (9-136)||(19853411-19853537)
chr4 (9-136)||(32766598-32766724)
chr4 (10-136)||(53444203-53444328)
chr4 (3-136)||(9178431-9178563)
chr4 (9-136)||(24098967-24099092)
chr4 (22-149)||(33921151-33921277)
chr4 (3-129)||(10258802-10258927)
chr4 (3-136)||(54021938-54022069)
chr4 (9-149)||(26633557-26633696)
chr4 (10-136)||(10496420-10496545)
chr4 (14-136)||(35348396-35348517)
chr4 (22-136)||(45418609-45418722)
chr4 (9-136)||(2520863-2520989)
chr4 (9-136)||(13634199-13634325)
chr4 (9-136)||(21686141-21686267)
chr4 (10-119)||(8670570-8670678)
chr4 (11-136)||(47320311-47320435)
chr4 (9-134)||(56156543-56156667)
chr4 (9-136)||(17949223-17949349)
chr4 (9-136)||(17953075-17953201)
chr4 (38-136)||(29120278-29120375)
chr4 (3-139)||(26090806-26090945)
chr4 (17-136)||(27652036-27652153)
chr4 (9-129)||(43510281-43510399)
chr4 (12-139)||(52060819-52060945)
chr4 (12-136)||(31891186-31891309)
chr4 (9-136)||(29960848-29960974)
chr4 (17-149)||(36194801-36194931)
chr4 (22-149)||(36204265-36204391)
chr4 (92-154)||(7008870-7008932)
chr4 (95-136)||(6155122-6155163)
chr4 (17-129)||(9714004-9714113)
chr4 (27-136)||(37030363-37030471)
chr4 (12-145)||(52944398-52944530)
chr4 (92-136)||(22305520-22305564)
chr4 (12-136)||(36161798-36161921)
chr4 (92-136)||(37465648-37465692)
chr4 (12-111)||(12199617-12199715)
chr4 (92-149)||(4821081-4821139)
chr4 (31-129)||(55228084-55228181)
chr4 (12-57)||(9048751-9048796)
chr4 (92-149)||(36184697-36184754)
chr4 (95-136)||(37684026-37684067)
chr4 (27-136)||(42032428-42032535)
chr4 (92-149)||(48257518-48257575)
chr4 (92-149)||(49072631-49072688)
chr4 (27-71)||(12265554-12265598)
chr4 (92-136)||(26123426-26123470)
chr4 (26-62)||(50766466-50766502)
chr4 (27-62)||(10389708-10389743)
chr4 (27-62)||(34024392-34024427)
chr4 (45-83)||(18995532-18995570)
chr4 (27-57)||(43353512-43353542)
chr4 (27-67)||(1621472-1621511)
chr4 (27-63)||(33332540-33332576)
chr4 (27-87)||(35964904-35964964)
chr4 (92-136)||(44596826-44596870)
chr4 (26-62)||(47417761-47417797)
chr4 (26-62)||(53616604-53616640)
chr4 (92-128)||(55580372-55580408)
[»] chr8 (68 HSPs)
chr8 (9-136)||(23230709-23230835)
chr8 (3-136)||(27110362-27110494)
chr8 (9-136)||(7677180-7677306)
chr8 (11-136)||(20553138-20553262)
chr8 (12-149)||(29939369-29939505)
chr8 (9-136)||(31013505-31013631)
chr8 (3-136)||(3673501-3673633)
chr8 (11-136)||(20559641-20559765)
chr8 (11-136)||(20571203-20571327)
chr8 (9-136)||(37971349-37971475)
chr8 (12-136)||(33214568-33214691)
chr8 (9-136)||(9637306-9637432)
chr8 (3-149)||(17693497-17693643)
chr8 (10-149)||(45445695-45445833)
chr8 (3-141)||(24186553-24186690)
chr8 (3-136)||(16928654-16928786)
chr8 (3-136)||(28897769-28897901)
chr8 (9-136)||(10377755-10377881)
chr8 (18-136)||(30568218-30568335)
chr8 (14-136)||(40618970-40619091)
chr8 (3-136)||(28086709-28086842)
chr8 (12-136)||(5046822-5046945)
chr8 (27-139)||(7198089-7198200)
chr8 (16-136)||(7883138-7883257)
chr8 (3-111)||(14544825-14544932)
chr8 (12-136)||(15344377-15344500)
chr8 (12-136)||(15433442-15433565)
chr8 (12-136)||(15524746-15524869)
chr8 (12-136)||(18890596-18890719)
chr8 (9-137)||(40211198-40211325)
chr8 (12-138)||(5333498-5333623)
chr8 (3-136)||(16247120-16247252)
chr8 (12-136)||(43833893-43834016)
chr8 (12-136)||(41896586-41896709)
chr8 (12-149)||(29617158-29617294)
chr8 (12-141)||(33347413-33347541)
chr8 (12-136)||(1239294-1239417)
chr8 (27-139)||(39657538-39657649)
chr8 (12-136)||(42046290-42046413)
chr8 (12-136)||(1236594-1236717)
chr8 (12-136)||(14585746-14585869)
chr8 (10-118)||(25190980-25191089)
chr8 (92-138)||(20227173-20227219)
chr8 (27-136)||(14916085-14916192)
chr8 (27-71)||(471127-471171)
chr8 (22-134)||(8867884-8867995)
chr8 (92-143)||(8441345-8441396)
chr8 (92-139)||(41060157-41060204)
chr8 (22-111)||(24099172-24099260)
chr8 (20-136)||(34609913-34610028)
chr8 (27-71)||(21237874-21237918)
chr8 (27-71)||(28239928-28239972)
chr8 (92-136)||(35283260-35283304)
chr8 (92-135)||(14913236-14913279)
chr8 (26-60)||(14906879-14906913)
chr8 (96-138)||(17427091-17427133)
chr8 (96-138)||(17430741-17430783)
chr8 (92-134)||(24419064-24419106)
chr8 (12-69)||(8443474-8443531)
chr8 (27-72)||(10331175-10331220)
chr8 (92-129)||(25238497-25238534)
chr8 (27-124)||(35812756-35812852)
chr8 (8-41)||(36948428-36948461)
chr8 (26-62)||(4809058-4809094)
chr8 (92-136)||(8094913-8094955)
chr8 (92-136)||(8826359-8826403)
chr8 (26-62)||(11464265-11464301)
chr8 (26-62)||(43890078-43890114)
[»] chr6 (46 HSPs)
chr6 (9-136)||(33053067-33053193)
chr6 (9-139)||(23128683-23128812)
chr6 (3-126)||(127728-127850)
chr6 (9-136)||(3913473-3913599)
chr6 (3-133)||(30894659-30894787)
chr6 (11-118)||(34018627-34018733)
chr6 (10-136)||(29255345-29255470)
chr6 (12-136)||(14801895-14802018)
chr6 (9-136)||(606269-606395)
chr6 (9-136)||(12170533-12170659)
chr6 (3-149)||(30608401-30608546)
chr6 (27-136)||(1523491-1523599)
chr6 (9-136)||(29319776-29319903)
chr6 (9-136)||(67900-68026)
chr6 (8-119)||(3355181-3355291)
chr6 (9-136)||(7515101-7515227)
chr6 (27-136)||(546114-546222)
chr6 (20-149)||(20225927-20226055)
chr6 (20-149)||(22119911-22120039)
chr6 (30-137)||(31852091-31852197)
chr6 (12-137)||(528248-528372)
chr6 (14-135)||(9380093-9380213)
chr6 (12-136)||(8102794-8102917)
chr6 (45-139)||(31296921-31297014)
chr6 (9-119)||(32327133-32327242)
chr6 (27-136)||(1704031-1704139)
chr6 (12-88)||(24227678-24227754)
chr6 (12-136)||(26588371-26588494)
chr6 (93-140)||(13546596-13546643)
chr6 (11-117)||(4010430-4010535)
chr6 (27-136)||(30493615-30493723)
chr6 (92-136)||(9341550-9341594)
chr6 (12-136)||(30776731-30776854)
chr6 (12-141)||(679177-679304)
chr6 (99-136)||(21426585-21426622)
chr6 (64-136)||(14846120-14846191)
chr6 (26-62)||(25064323-25064359)
chr6 (58-136)||(14174970-14175047)
chr6 (58-136)||(14179506-14179583)
chr6 (27-72)||(1933654-1933699)
chr6 (14-71)||(32059969-32060026)
chr6 (26-62)||(4088547-4088583)
chr6 (26-62)||(7875998-7876034)
chr6 (26-62)||(7881056-7881092)
chr6 (27-71)||(28635066-28635110)
chr6 (92-136)||(32802693-32802737)
[»] chr7 (58 HSPs)
chr7 (3-136)||(37837357-37837489)
chr7 (3-149)||(13796815-13796960)
chr7 (9-141)||(9450031-9450162)
chr7 (9-136)||(39171489-39171615)
chr7 (9-136)||(48061488-48061614)
chr7 (3-136)||(19404656-19404788)
chr7 (3-136)||(42978670-42978802)
chr7 (9-136)||(12141207-12141333)
chr7 (9-136)||(47590377-47590503)
chr7 (10-136)||(24770313-24770438)
chr7 (8-136)||(46700100-46700227)
chr7 (9-136)||(8001445-8001571)
chr7 (12-139)||(22743013-22743139)
chr7 (10-149)||(38798848-38798986)
chr7 (9-136)||(48316711-48316837)
chr7 (9-139)||(19296936-19297065)
chr7 (10-136)||(45349698-45349823)
chr7 (3-136)||(25287085-25287217)
chr7 (9-141)||(30756713-30756844)
chr7 (9-149)||(34899493-34899632)
chr7 (11-136)||(28044655-28044779)
chr7 (16-136)||(24069293-24069412)
chr7 (12-136)||(35133016-35133139)
chr7 (10-136)||(39328692-39328814)
chr7 (9-136)||(40993223-40993349)
chr7 (27-136)||(35665034-35665142)
chr7 (3-107)||(5792856-5792959)
chr7 (27-149)||(25255311-25255432)
chr7 (12-134)||(4999930-5000051)
chr7 (17-71)||(24350802-24350856)
chr7 (3-149)||(9977096-9977237)
chr7 (91-136)||(28407817-28407862)
chr7 (16-136)||(5348491-5348610)
chr7 (12-127)||(38880485-38880600)
chr7 (12-119)||(28476296-28476401)
chr7 (92-138)||(44311686-44311732)
chr7 (12-149)||(39229083-39229218)
chr7 (27-136)||(21266478-21266588)
chr7 (31-149)||(48930795-48930912)
chr7 (92-149)||(46822629-46822685)
chr7 (79-136)||(49148014-49148070)
chr7 (12-72)||(1769140-1769200)
chr7 (27-71)||(13592453-13592497)
chr7 (92-136)||(29617598-29617642)
chr7 (92-136)||(46244151-46244195)
chr7 (27-62)||(6002109-6002144)
chr7 (12-62)||(11343879-11343929)
chr7 (27-60)||(14627835-14627868)
chr7 (92-149)||(38050952-38051009)
chr7 (27-68)||(42067010-42067051)
chr7 (26-62)||(2843195-2843231)
chr7 (12-72)||(5078376-5078436)
chr7 (92-136)||(27341698-27341742)
chr7 (26-62)||(34773798-34773834)
chr7 (12-136)||(41553333-41553456)
chr7 (92-136)||(43369653-43369697)
chr7 (26-62)||(46822102-46822138)
chr7 (12-60)||(46822712-46822760)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-136)||(65941-66073)
[»] scaffold0127 (1 HSPs)
scaffold0127 (9-136)||(15556-15682)
[»] chr3 (82 HSPs)
chr3 (3-136)||(33579937-33580069)
chr3 (9-141)||(7448808-7448939)
chr3 (9-141)||(7456950-7457081)
chr3 (16-136)||(19619784-19619902)
chr3 (9-136)||(9797433-9797559)
chr3 (9-136)||(10108299-10108425)
chr3 (9-136)||(10229539-10229665)
chr3 (9-136)||(21533708-21533834)
chr3 (14-136)||(53099858-53099978)
chr3 (3-136)||(38545856-38545988)
chr3 (8-136)||(23799809-23799936)
chr3 (9-136)||(9998530-9998656)
chr3 (9-136)||(10233133-10233259)
chr3 (9-136)||(12050547-12050673)
chr3 (9-136)||(20608798-20608924)
chr3 (9-136)||(21431676-21431802)
chr3 (16-139)||(43488486-43488608)
chr3 (9-136)||(45568344-45568470)
chr3 (9-136)||(46304419-46304545)
chr3 (9-136)||(47896215-47896340)
chr3 (22-136)||(42460825-42460938)
chr3 (14-136)||(52923016-52923137)
chr3 (9-136)||(6954595-6954721)
chr3 (33-136)||(54149078-54149180)
chr3 (14-136)||(19339244-19339364)
chr3 (14-139)||(18011088-18011212)
chr3 (11-136)||(21313101-21313225)
chr3 (9-133)||(40556765-40556888)
chr3 (10-141)||(47041942-47042072)
chr3 (17-136)||(51303542-51303660)
chr3 (10-136)||(48650633-48650758)
chr3 (12-136)||(8914778-8914901)
chr3 (17-133)||(32701562-32701677)
chr3 (17-136)||(16235497-16235615)
chr3 (9-136)||(38860011-38860139)
chr3 (47-136)||(4711583-4711671)
chr3 (3-136)||(12149683-12149815)
chr3 (3-136)||(26275718-26275850)
chr3 (27-136)||(51923808-51923916)
chr3 (12-136)||(7546681-7546804)
chr3 (12-136)||(20464869-20464992)
chr3 (12-136)||(53807757-53807880)
chr3 (9-120)||(36461346-36461456)
chr3 (9-136)||(40487389-40487514)
chr3 (27-136)||(14859571-14859679)
chr3 (27-136)||(29922138-29922246)
chr3 (27-136)||(29971291-29971399)
chr3 (8-117)||(45424860-45424968)
chr3 (16-141)||(48199847-48199971)
chr3 (12-136)||(21289713-21289836)
chr3 (14-106)||(43016923-43017014)
chr3 (3-105)||(20987729-20987830)
chr3 (27-125)||(53508307-53508404)
chr3 (12-136)||(628822-628945)
chr3 (17-136)||(27706125-27706243)
chr3 (11-117)||(45425657-45425762)
chr3 (64-136)||(20987654-20987725)
chr3 (81-141)||(43017023-43017082)
chr3 (92-139)||(19862224-19862271)
chr3 (12-70)||(27066020-27066078)
chr3 (3-72)||(35864894-35864963)
chr3 (3-136)||(37040826-37040957)
chr3 (96-149)||(42455706-42455759)
chr3 (75-136)||(44959872-44959932)
chr3 (12-149)||(50194221-50194357)
chr3 (27-136)||(52115920-52116028)
chr3 (26-62)||(12116182-12116218)
chr3 (27-71)||(22803107-22803151)
chr3 (92-136)||(26739256-26739300)
chr3 (92-136)||(44805174-44805218)
chr3 (75-139)||(46220792-46220855)
chr3 (12-62)||(26716079-26716129)
chr3 (93-149)||(6903071-6903128)
chr3 (92-141)||(7792081-7792130)
chr3 (96-141)||(9173897-9173942)
chr3 (92-121)||(51487240-51487269)
chr3 (96-136)||(3085200-3085240)
chr3 (92-136)||(27856310-27856354)
chr3 (26-62)||(32607553-32607589)
chr3 (96-136)||(35175553-35175593)
chr3 (11-63)||(41818280-41818332)
chr3 (92-136)||(41818360-41818404)
[»] scaffold0088 (1 HSPs)
scaffold0088 (14-136)||(50845-50966)
[»] scaffold0445 (1 HSPs)
scaffold0445 (10-149)||(1409-1547)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-136)||(32646-32772)
[»] scaffold0121 (1 HSPs)
scaffold0121 (3-135)||(31174-31305)
[»] scaffold0136 (2 HSPs)
scaffold0136 (3-134)||(9943-10073)
scaffold0136 (92-148)||(34649-34705)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-136)||(71199-71324)
[»] scaffold0884 (1 HSPs)
scaffold0884 (9-136)||(1872-1998)
[»] scaffold0634 (1 HSPs)
scaffold0634 (3-136)||(8570-8702)
[»] scaffold0154 (1 HSPs)
scaffold0154 (8-121)||(25353-25465)
[»] scaffold0262 (1 HSPs)
scaffold0262 (3-131)||(1723-1850)
[»] scaffold0128 (1 HSPs)
scaffold0128 (8-136)||(36888-37015)
[»] scaffold0026 (1 HSPs)
scaffold0026 (9-136)||(71769-71889)
[»] scaffold0888 (1 HSPs)
scaffold0888 (12-139)||(1574-1700)
[»] scaffold0347 (1 HSPs)
scaffold0347 (12-149)||(6097-6233)
[»] scaffold0021 (1 HSPs)
scaffold0021 (27-135)||(4254-4361)
[»] scaffold0042 (1 HSPs)
scaffold0042 (27-71)||(92459-92503)
[»] scaffold0064 (1 HSPs)
scaffold0064 (92-139)||(18978-19025)
[»] scaffold0039 (3 HSPs)
scaffold0039 (92-136)||(53297-53341)
scaffold0039 (92-136)||(53637-53681)
scaffold0039 (92-136)||(93253-93297)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 31919049 - 31919182
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31919049 agatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgcagatccagaagcatgaaaatttcagtgacttagggttttatcatat 31919148  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  31919149 tatttgtagacattttgtcgttgtatgctattaa 31919182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 14872700 - 14872832
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||   ||||  |||||||||| |||||||||||    
T  14872700 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttagg-ttttatcatat 14872798  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| ||||||||||||||||    
T  14872799 tatttgtaggcattttgccgttgtatgctattaa 14872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 5983903 - 5984029
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  5983903 acatcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatg-ttttatcatattatttg 5984001  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  5984002 taggcattttgtcgttgtatgctattaa 5984029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 21947643 - 21947525
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||| ||||| |||||||| | |||||||||||||||||    
T  21947643 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaag-ttttatcatattatttg 21947545  T
Q  109 tagacattttgtcgttgtat 128  Q
    ||| ||||||| ||||||||    
T  21947544 taggcattttgccgttgtat 21947525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 34878302 - 34878177
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| |||||| ||||||||  |  |||||||||||||| ||||||||||||||||||    
T  34878302 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcagtgacttagg-ttttatcatattatttgt 34878204  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| |||| |||||||||||    
T  34878203 aggcattttgccgttttatgctattaa 34878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 10776492 - 10776360
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| | ||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||| ||||||||| |    
T  10776492 agatcgacatcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttagg-ttttatcattt 10776394  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| |||||||  ||||||| |||||||    
T  10776393 tatttgtaggcattttgctgttgtattctattaa 10776360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 44915706 - 44915829
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||  ||||| ||  |||| | |||||||||||||||||    
T  44915706 acatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttctta-gattttatcatattatttg 44915804  T
Q  109 tagacattttgtcgttgtatgctat 133  Q
    ||| ||||||| |||||||||||||    
T  44915805 taggcattttgccgttgtatgctat 44915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 15431689 - 15431567
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||||||  | |||||  | ||||||||||| |||  |||||||||||||||||||    
T  15431689 atcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacataga-ttttatcatattatttgta 15431591  T
Q  111 gacattttgtcgttgtatgctatt 134  Q
    |||||||| |||||||||||||||    
T  15431590 gacattttatcgttgtatgctatt 15431567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 7836827 - 7836695
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| |||||||||||| | |||  || |||||  |||||| |||||||||| |||||||||||    
T  7836827 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttagg-ttttatcatat 7836729  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| |||| |||||||||||    
T  7836728 tatttgtaggcattttgccgttttatgctattaa 7836695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 4413210 - 4413307
Alignment:
Q  38 atttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||  |||||||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttagg-ttttatcatattatttgtaggcattttgctgttgtatgctattaa 4413307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 23291666 - 23291541
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| || ||||||||| |||||| ||||||||  |||||| |||||||||| |||||||||||||||||     
T  23291666 catcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgg 23291568  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    ||  |||||| |||| |||||||||||    
T  23291567 aggtattttgccgttttatgctattaa 23291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 31984247 - 31984354
Alignment:
Q  28 tcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgta 127  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||   ||||| |||||||||| |||||||||||||||| ||  |||||||||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttttaagcattttgtcgttgta 31984345  T
Q  128 tgctattaa 136  Q
    |||||||||    
T  31984346 tgctattaa 31984354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 45415625 - 45415754
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| ||||||||||  |||| ||||||||||  |||||||||||||||||| |||||||    ||||| |||||||||| |||||||||||||||||    
T  45415625 acatcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttagg-ttttatcatattatttg 45415723  T
Q  109 tagacattttgtcgttgtatgctattaattt 139  Q
    ||| ||||||| ||||||||  |||||||||    
T  45415724 taggcattttgccgttgtataatattaattt 45415754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 3228338 - 3228462
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||||  || |||| | |||||  ||| ||||| |||||||||||||||||||    
T  3228338 atcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttagg-ttttatcatattatttgta 3228436  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| |||| |||| ||||||    
T  3228437 ggcattttgccgttatatgttattaa 3228462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 16989456 - 16989564
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||| |||| ||||||||||||| |||| |||||| ||| ||||  ||||||||||||||||| |||||||||||||||||||| ||||||| |||| |    
T  16989456 ttcaaccaataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttagg-ttttatcatattatttgtaggcattttgccgtttt 16989554  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  16989555 atgctattaa 16989564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 7337688 - 7337562
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||| || || |||||||||||||||||    
T  7337688 acatcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttgg-ttttatcatattatttg 7337590  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||||||  |||| ||||||||||    
T  7337589 taggcattttgctgttgcatgctattaa 7337562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 29738689 - 29738563
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||| ||| ||||||| |||||| |||| ||||||||   |||||||||||||||| | ||||||||||||||     
T  29738689 acatcagtcaattacaaattcaaccaatgacttgggcgtcaatgttgcaaatccggaagcatgtgtatttcagtgacttagg-tgttatcatattattta 29738591  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    | | ||||| | ||||||||||||||||    
T  29738590 ttggcatttggccgttgtatgctattaa 29738563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 32873886 - 32873760
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  || |||||||||||| |||||||| ||||||||||||||| ||||   |||||  | |||| |  ||||||||||||||||||||    
T  32873886 tcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttcgatcactttga-ttttatcatattatttgtag 32873788  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
    |||| ||||| |||||||||||||||||    
T  32873787 acatattgtcattgtatgctattaattt 32873760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 35484416 - 35484290
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  ||||||||||||||||||  |||||||   ||||| |||| || || |||||||||||||||||    
T  35484416 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcgg-ttttatcatattatttg 35484318  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||| ||||||||||||||||    
T  35484317 taagcattttgccgttgtatgctattaa 35484290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 51916687 - 51916575
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||  ||||| |||||||| | |||||||||| |||||| |     
T  51916687 tcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatttc-gtgactta-gattttatcata-tatttgcat 51916591  T
Q  112 acattttgtcgttgta 127  Q
     |||||||||||||||    
T  51916590 gcattttgtcgttgta 51916575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 36775732 - 36775596
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||   ||  | |||| ||| | ||| ||||||||||||||||    
T  36775732 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgattta-gatttcatcatattatttgtag 36775634  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     ||||||| |||||||||||||||| || ||| |||||    
T  36775633 gcattttgccgttgtatgctattaacttggatgttgtg 36775596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 8211935 - 8211817
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||| ||||| ||||| ||||||| || ||||||| ||||||||||| ||||||||   |||||| ||||||||| |||||||||||||||||    
T  8211935 acatcagtcaaatacaaattcaaccaatgatctg-gcgtcaatgttgcagatccggaagcatgggtatttcaatgacttagg-ttttatcatattatttg 8211838  T
Q  109 tagacattttgtcgttgtatg 129  Q
    |||  ||||||||||| ||||    
T  8211837 taggtattttgtcgttatatg 8211817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 24583020 - 24583143
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||| |||   |||| ||| | || |||||||||||||||||    
T  24583020 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgattta-gattatatcatattatttgtag 24583118  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||| ||||||    
T  24583119 gcattttgccgttgtatgatattaa 24583143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 32395065 - 32395191
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||| |  |||||||   ||||| |||||||| | ||||||||||||||||     
T  32395065 acatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaag-ttttatcatattattta 32395163  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| || |||||||||||||    
T  32395164 taggcattttgccgctgtatgctattaa 32395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 49626983 - 49627109
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||| ||||||||||||||||  |||||||||||||||| |||||||| ||  |||    ||| ||| | || |||||| ||||||||||    
T  49626983 tcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgattta-gattatatcatcttatttgtag 49627081  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
    |||||||| |||||||||||||||||||    
T  49627082 acattttgccgttgtatgctattaattt 49627109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 44543344 - 44543465
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    ||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||  ||||| ||| | || ||||||||||||||||| |    
T  44543344 agtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgattta-gattatatcatattatttgtaggc 44543442  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||| |||| |||||||||||    
T  44543443 attttgccgttttatgctattaa 44543465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 13144830 - 13144698
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||| ||||||||||||||||  ||||||  |||||||||   ||||||||  |||||||||||||| | |||||||||| ||||||||| |||    
T  13144830 tcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgactta-gattttatcataatatttgtaggcat 13144732  T
Q  116 tttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||| | || ||||||||||| || ||| |||||    
T  13144731 tttgccattttatgctattaacttggatgttgtg 13144698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 48750255 - 48750378
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| || ||||||||||||| |||||||||||||||||||| |||||||   |||   |||| ||| | ||| ||||||||||||||||    
T  48750255 tcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgattta-gatttcatcatattatttgtag 48750353  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  48750354 gcattttgccgttgtatgctattaa 48750378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 1742349 - 1742455
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||| |||||||||| ||||| |||||||||| |||||||||||| ||||||  |||||||  |||||| |||||  ||| ||||||||||||||||||    
T  1742349 catcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgac--agg-ttttatcatattatttgt 1742445  T
Q  110 agacattttg 119  Q
    || |||||||    
T  1742446 aggcattttg 1742455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 31317821 - 31317929
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||||||||| ||||||||||| |||| || |||||||| | ||||| |||| ||| |  ||||||||||||||||||| |||||| ||||||     
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgattta-gaatttatcatattatttgtaggcattttatcgttgc 31317919  T
Q  127 atgctattaa 136  Q
    || |||||||    
T  31317920 atcctattaa 31317929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 45789615 - 45789734
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||  |||||||||||||||| ||||| |||||| |||||| ||||||||   |||||  ||||||| |  ||||| |||||||||||||  ||    
T  45789615 tcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcatgtgcatttctttgactta-gaatttattatattatttgtaggaat 45789713  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||||| ||||||||||||||    
T  45789714 tttgtcattgtatgctattaa 45789734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 39888243 - 39888388
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||||||||| |||||||||||||||| ||||| |||||| ||||||    |||     ||||| |||||||| | |||||||||||    
T  39888243 agatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgactta-gattttatcatat 39888341  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    | ||| ||  |||||| ||||||||||||||||| |||||| |||||    
T  39888342 tctttatatgcattttatcgttgtatgctattaacttagatgttgtg 39888388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 27580159 - 27580027
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| ||||| |||||||| |||||| ||||||||| |||||||| |||||||| |  ||||||||  ||||| |||||||||  |||||||||||    
T  27580159 agatcgacttcagtaaattacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttaga-ttttatcatat 27580061  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||  ||  ||||||| | || |||||||||||    
T  27580060 tattcataagcattttgccattttatgctattaa 27580027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 35462072 - 35461978
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 106  Q
    ||||||||||||||| || || |||||||| |  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||    
T  35462072 atcagtcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaag-ttttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 49504620 - 49504494
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| ||||||||||  |||| ||||||||||   ||||||||||||||||| |||||||||   |||| |||| || || ||||| |||| |||||     
T  49504620 acatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtga-tttgggttttaacataatatttt 49504522  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||  ||||||||||||||||    
T  49504521 taggcattttaccgttgtatgctattaa 49504494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 11462441 - 11462381
Alignment:
Q  75 atttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| |||||||| | ||||||||||||||||||||  |||||||||||||||||||||||    
T  11462441 atttcggtgacttaag-ttttatcatattatttgtaggaattttgtcgttgtatgctattaa 11462381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 18939389 - 18939513
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  || |||||||||||||  |||| ||||||||||||  ||||||||   ||||  |||||||| |  ||||||| |||||||| ||    
T  18939389 tcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgtattttggtgactta-gaatttatcaaattatttgcag 18939487  T
Q  112 aca-ttttgtcgttgtatgctattaa 136  Q
     || ||||||||||||||||||||||    
T  18939488 gcatttttgtcgttgtatgctattaa 18939513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 19060979 - 19061115
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| ||| ||||||||||| |||||  | |||| |||| ||||||||||| | ||  |||   |||| ||||  || |||||||||||||||||    
T  19060979 tcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttaga-ttatatcatattatttgtag 19061077  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     ||||||| |||||||||||||||| || ||| |||||    
T  19061078 gcattttgccgttgtatgctattaacttggatgttgtg 19061115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 27456601 - 27456646
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtc 48  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  27456601 agatcgacatcagtcaattacaagttcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 15492373 - 15492480
Alignment:
Q  28 tcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgta 127  Q
    ||||||||||||||| ||||||  ||||||||||| | |||||| | |||   |||| ||||  |||||||||||||||||||  ||||||  |||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttaga-ttttatcatattatttgtatgcattttaccgttgta 15492471  T
Q  128 tgctattaa 136  Q
    |||||||||    
T  15492472 tgctattaa 15492480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 25564068 - 25564191
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||||||||||||||| |||||||| |||||||||  |||||||||  |||   |||| |||   |||||| ||||| |||||||    
T  25564068 tcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgattta-tattttattatattgtttgtag 25564166  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
    | ||||||| |||||||| ||||||    
T  25564167 atattttgttgttgtatgttattaa 25564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 43412459 - 43412503
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  43412459 ttcaatcaatgatttgaaagtcaacgttgcagatccagaagcatg 43412503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 51373801 - 51373757
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  51373801 ttttatcatattatttgtaggcattttgtcgtcgtatgctattaa 51373757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 16262932 - 16262991
Alignment:
Q  13 cagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    |||||||| |||  |||||||||||||||| || |||||||||||||||| |||||||||    
T  16262932 cagtcaatcacatattcaatcaatgatttgtgcatcaacgttgcagatccggaagcatga 16262991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 21687527 - 21687574
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  21687527 ttttatcatattatttgtaggcattttctcgttttatgctattaattt 21687574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24597346 - 24597287
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||||| || ||||||||||||||||  ||||||||||| |||||| ||||||||    
T  24597346 tcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatg 24597287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 26535425 - 26535496
Alignment:
Q  18 aattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttag 89  Q
    |||||||| || ||||||||||||| || |||||||||||||||| |||||||||  ||| | |||||||||    
T  26535425 aattacaatttaaatcaatgatttgggcttcaacgttgcagatccggaagcatgagtattccggtgacttag 26535496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 9341815 - 9341932
Alignment:
Q  31 atcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgc 130  Q
    ||||||| ||||  |||||||| ||||||| ||| |||||| | |||   |||||||||  ||||||||||||||||||||  ||||||| ||||||| |    
T  9341815 atcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttaga-ttttatcatattatttgtaggtattttgttgttgtatac 9341913  T
Q  131 tattaatttagatattgtg 149  Q
    |||||| ||  ||||||||    
T  9341914 tattaacttgaatattgtg 9341932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 24583298 - 24583339
Alignment:
Q  95 tatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaa 24583339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 5856058 - 5856102
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||    
T  5856058 ttttaccatattatttgtagaaattttgccgttgtatgctattaa 5856102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 19596403 - 19596359
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||    
T  19596403 ttttatcatattatttgtaggcattttgccgttttatgctattaa 19596359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 41903899 - 41903943
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||| || |||||||| ||||||||||||||    
T  41903899 ttttatcatattatttgttgatattttgtcattgtatgctattaa 41903943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 37720171 - 37720112
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    |||| |||| |||| |||| | ||||||||| |||||||||||||||||||| |||||||    
T  37720171 tcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatg 37720112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 16161977 - 16162026
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    |||||||||||||||||||| ||||||| ||| | |||||||||| ||||    
T  16161977 ttttatcatattatttgtaggcattttgccgtggaatgctattaacttag 16162026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 27456648 - 27456677
Alignment:
Q  107 tgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||||||||||||    
T  27456648 tgtagacattttgtcgttgtatgctattaa 27456677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 31836898 - 31836931
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcaga 59  Q
    |||||||||| |||||||||||||||||||||||    
T  31836898 gttcaatcaaagatttgagcgtcaacgttgcaga 31836931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 799773 - 799730
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||    
T  799773 ttttatcatattatttgtagatatttt-tcattgtatgctattaa 799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 6217766 - 6217722
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  |||||  ||||||||||||||||    
T  6217766 ttttatcatattatttgtaggtattttaccgttgtatgctattaa 6217722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 12635319 - 12635363
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| |||  || ||||||||||||||||||||||||    
T  12635319 ttttatcatatttttttaaggcattttgtcgttgtatgctattaa 12635363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 14489421 - 14489465
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  ||||||| |||||||| ||||||    
T  14489421 ttttatcatattatttgtaggtattttgttgttgtatgttattaa 14489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 40646765 - 40646801
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  40646765 gttcaatcaaagatttgggcgtcaacgttgcagatcc 40646801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 13719103 - 13718992
Alignment:
Q  113 cattttgtcgttgtatgctattaatttagatattgtgtgttccttttcaaaaataaacttggatattgtgtgtttatttagatgttctccatttacgttt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||  |||||||||||    
T  13719103 cattttgtcgttgtatgctattaatttagatattgtgtgttccttttcaaaa--aaacttggatattctgtgtttatttagatgttcatcatttacgttt 13719006  T
Q  213 ttagcgatgttgaa 226  Q
    ||||||||||||||    
T  13719005 ttagcgatgttgaa 13718992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 8809348 - 8809492
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||| ||||||||||||||| | |||||||||||    
T  8809348 agatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgactta-gattttatcatat 8809446  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || | ||||||||||||||||||||||||||||| || ||| |||||    
T  8809447 ta-tagtagacattttgtcgttgtatgctattaacttggatgttgtg 8809492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 4904177 - 4904032
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| |||||   |||||||| | |||||||||||||||||||||||||| | ||||| |||||||| | |||||||||||    
T  4904177 agatcgacatcagtcaattacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgactta-gattttatcatat 4904079  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||    
T  4904078 tatttgtagacattttgtcgttgtatgctattaacttggatgttgtg 4904032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 33923773 - 33923905
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| |||||||||||| |||||| ||||||||  |||||| |||||||||| |||||||||||    
T  33923773 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatat 33923871  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| || | |||||||||| |||||||||||    
T  33923872 tatttgcaggcgttttgtcgttttatgctattaa 33923905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 1421750 - 1421876
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||| ||||| |||||||||||||||||    
T  1421750 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagg-ttttatcatattatttg 1421848  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  1421849 taggcattttgtcgttgtatgctattaa 1421876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 4778827 - 4778956
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  4778827 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttg 4778925  T
Q  109 tagacattttgtcgttgtatgctattaattt 139  Q
    ||| ||||||| ||||||||| |||||||||    
T  4778926 taggcattttgccgttgtatgttattaattt 4778956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 19028946 - 19028814
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||||| || ||||| | ||||||||||     
T  19028946 agatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaactta-gattttatcatac 19028848  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| |||||| ||||| |||||||||||    
T  19028847 tatttgtaggcattttttcgttttatgctattaa 19028814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 31788532 - 31788656
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||| ||||| ||||||||||  ||||||||||||||||||  ||||||||  |||||||||||||||| ||||| |||||||||||||    
T  31788532 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttagg-ttttaacatattatttgta 31788630  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  31788631 ggcattttgccgttgtatgctattaa 31788656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 18763543 - 18763668
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||| |||||||||| ||||| |||| ||||| ||||||||||| ||||||| ||||||||  |||||| |||||||||| ||||||||||||||||||    
T  18763543 catcaatcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgt 18763641  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| |||| |||||||||||    
T  18763642 aggcattttgccgttttatgctattaa 18763668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 31128804 - 31128692
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||  ||||||||||||||   |||||||||||||||||||    
T  31128804 atcagtcaattacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgactta-tattttatcatattatttgta 31128706  T
Q  111 gacattttgtcgtt 124  Q
    | ||||||| ||||    
T  31128705 ggcattttgccgtt 31128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 7646547 - 7646678
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgag-----cgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatatt 103  Q
    ||||||||||||||||| ||||||||||||||| |      |||||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||    
T  7646547 acatcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatatt 7646645  T
Q  104 atttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||| ||||||| ||||||||||||||||    
T  7646646 atttgtaggcattttgccgttgtatgctattaa 7646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 11985255 - 11985120
Alignment:
Q  13 cagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtaga 112  Q
    |||||||||||||  |||| |||||||||  | |||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||     
T  11985255 cagtcaattacaaactcaaccaatgatttaggtgtcaacgttgcagatccagaagaatgagtatttcagtgacttagg-ttttatcatattatttgtagg 11985157  T
Q  113 cattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||  ||||||| ||||||| || ||| |||||    
T  11985156 cattttgctgttgtatcctattaacttggatgttgtg 11985120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 1415632 - 1415757
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| |||||| ||||||||  |||||| |||||||||| |||||||| |||||||||    
T  1415632 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcagattatttgt 1415730  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||  ||||  ||||||||||    
T  1415731 aggcattttaccgtttaatgctattaa 1415757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 36691942 - 36692074
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||| ||||||||||| ||||| ||||||||||  ||||||| ||||||||||  |||||||  |||||| |||| ||||| |||||||||||    
T  36691942 agattgacatcggtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttagg-ttttatcatat 36692040  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| |||| |||||||||||    
T  36692041 tatttgtaggcattttgccgttttatgctattaa 36692074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 5427894 - 5427769
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||||| |||| ||||| |||||| ||| ||||||||||||||||||| |||| |||   |||||||||||||||| |||||||||||||||||    
T  5427894 acatcagtcaat-acaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttagg-ttttatcatattatttg 5427797  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
     |  |||||| |||||||||||||||||    
T  5427796 caagcattttatcgttgtatgctattaa 5427769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 9169284 - 9169158
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||| |||||||| |||||  |||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | | |||||||||||||||    
T  9169284 acatcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-tcttatcatattatttg 9169186  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  9169185 taggcattttgccgttgtatgctattaa 9169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 29279596 - 29279470
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||| ||| |||||   |||| ||||||||   |||||||||||||||||    
T  29279596 acatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgactta-aattttatcatattatttg 29279498  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| |||| |||||||||||    
T  29279497 taggcattttgccgttttatgctattaa 29279470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 33585754 - 33585635
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  | ||| |||| ||| | |||||||||||||||||||  |||    
T  33585754 tcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtaattcggtgatttaag-ttttatcatattatttgtatgcat 33585656  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||| ||||||||||||||||    
T  33585655 tttgccgttgtatgctattaa 33585635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 7677899 - 7677773
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  | ||||||||||||||||  |||||||   ||||| |||| ||||| ||||||||||||||||     
T  7677899 acatcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattagg-ttttatcatattatttt 7677801  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  7677800 taggcattttgccgttgtatgctattaa 7677773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 25509094 - 25508968
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||| |||| ||| ||||   |||||  ||||||| | ||||||| |||||||||    
T  25509094 acatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgactta-gattttatcgtattatttg 25508996  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||| ||||||    
T  25508995 taggcattttgccgttgtatgttattaa 25508968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 27097432 - 27097307
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||  ||||||||   ||||| |||||||| | |||||||||||||||||    
T  27097432 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatctggaagcatg-gtatttcggtgacttaag-ttttatcatattatttg 27097335  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    |||  |||||| |||||||| |||||||    
T  27097334 taggaattttgccgttgtatactattaa 27097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 37876632 - 37876506
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||| ||| || ||||||||||||||||  |||||||   ||||| ||||||||   |||||||||||||||||    
T  37876632 acatcagtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgactta-aattttatcatattatttg 37876534  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||| ||||||||||||    
T  37876533 taggcattttgccgtcgtatgctattaa 37876506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 38445240 - 38445366
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||| |||||||| ||||| ||||||||||  |||||||||||||||||| ||||| ||   ||||| |||||||| | |||||||||||||||||    
T  38445240 acatcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaag-ttttatcatattatttg 38445338  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| | ||||||| ||||||    
T  38445339 taggcattttgccattgtatgttattaa 38445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 12677471 - 12677351
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |||||| ||||||||  |||||  |||||||||| ||||||||||||| |||||| |    
T  12677471 agtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-ttttatcatatta-ttgtaggc 12677374  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||  |||| |||||||||||    
T  12677373 atttttccgttttatgctattaa 12677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 43397127 - 43397018
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgtt-gcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttg 125  Q
    ||||| |||||||||| ||||||||||| | |||||| ||||||||  ||||||||||||||||| |||||||||||||||||||  ||||||| ||||     
T  43397127 ttcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttagg-ttttatcatattatttgtacgcattttgccgttt 43397029  T
Q  126 tatgctattaa 136  Q
    |||||||||||    
T  43397028 tatgctattaa 43397018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 7448321 - 7448421
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||  ||||| |||| |||||  |||||||||||||||||| |||||||||  |||||||||||||| | |||||||||||||||||    
T  7448321 acatcagtcaattacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaag-ttttatcatattatttg 7448419  T
Q  109 ta 110  Q
    ||    
T  7448420 ta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 10237239 - 10237116
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| ||||||||||||||||  |||||||||||||||||||||||||||   |||    ||| ||| | ||| ||||||||||||||||    
T  10237239 tcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgattta-gatttcatcatattatttgtag 10237141  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  10237140 gcattttgtcgttgtatgctattaa 10237116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 12554204 - 12554081
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  |||||||||||||||| | ||  || ||||| ||   |||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  12554204 tcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagtatttcagtaacttagg-ttttatcatattatttgtag 12554106  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||| ||||||    
T  12554105 gcattttgtcgttgtatgatattaa 12554081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 17249170 - 17249047
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||| ||||| ||  |||   |||| ||||  || |||||||||||||||||    
T  17249170 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttaga-ttatatcatattatttgtag 17249072  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
    |||||||| ||||||||||||||||    
T  17249071 acattttgccgttgtatgctattaa 17249047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 19062378 - 19062247
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatatt----- 103  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||  |||||||   ||||| |||||||| | ||||||||||||         
T  19062378 acatcagtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaag-ttttatcatattattta 19062280  T
Q  104 atttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||| ||||||| ||||||||||||||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaa 19062247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 41694698 - 41694821
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| ||||||||  |||||||||||||||| || |||||||||||||| |||||||||| | |||   |||||||| | |||||||||||||||| |||    
T  41694698 tcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgactta-gattttatcatattatttatag 41694796  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     |||||||||||| |||| ||||||    
T  41694797 gcattttgtcgttatatgttattaa 41694821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 14955621 - 14955734
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||   |||    ||| ||| | ||||||||||||||||||||||||||| || ||||    
T  14955621 ttcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgtattctgatgattta-gattttatcatattatttgtagacattttatcattgt 14955719  T
Q  127 atgctattaatttag 141  Q
    ||| |||||| ||||    
T  14955720 atgttattaacttag 14955734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 31210633 - 31210505
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||   |||||||   ||||| |||| ||||| |||||||||||||||||    
T  31210633 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttagg-ttttatcatattatttg 31210535  T
Q  109 tagacattttgtcgttgtatgctattaatt 138  Q
    ||| ||||||| ||   |||||||||||||    
T  31210534 taggcattttgccggattatgctattaatt 31210505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 3309022 - 3309145
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||   |||   |||| |||   ||| ||||||||||||||||    
T  3309022 tcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggtattctggtgattta-tatttcatcatattatttgtag 3309120  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  3309121 tcattttgccgttgtatgctattaa 3309145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 4041620 - 4041489
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| |||||||| |||  |||| ||||||||||  ||||||||||||||||||  ||||||||  |||||  | |||||||| ||||||||||||||||    
T  4041620 acattagtcaattgcaaactcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggc-tttatcatattatttg 4041522  T
Q  109 tagacattttgtcgttgtatgctattaatttag 141  Q
    ||| |||||||  |||| |||||||||| ||||    
T  4041521 tagccattttgctgttgcatgctattaacttag 4041489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 30400058 - 30399936
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga------aaatttcagtgacttaggcttttatcatattat 105  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||       | ||| ||||||||| | ||||||||||||||    
T  30400058 tcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgactta-gattttatcatattat 30399960  T
Q  106 ttgtagacattttgtcgttgtatg 129  Q
    |||||| ||||||| ||| |||||    
T  30399959 ttgtaggcattttgccgtcgtatg 30399936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 32448642 - 32448503
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttag--gcttttatcatattatttgt 109  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||   |||| ||||    || |||||||||||||||    
T  32448642 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattattatatcatattatttgt 32448543  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || ||||||| |||||||||||||||| || ||| |||||    
T  32448542 aggcattttgccgttgtatgctattaacttggatgttgtg 32448503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 17151500 - 17151624
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagca-tgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||||||||||||  |||||||||||||||| ||||| |||||| |||||| |||||| ||   ||||| ||||||| ||  |||||||||||||| |||    
T  17151500 tcagtcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcattgggtatttcggtgactt-ggaatttatcatattattagta 17151598  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    |  ||||||| |||||||||||||||    
T  17151599 ggtattttgttgttgtatgctattaa 17151624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 33760216 - 33760093
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||||| |   ||||||||||||||||||||| | |||||||||||| || ||||   |||||||||||||| |   ||||||||||||||||||    
T  33760216 tcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataaacatgtgtatttcagtgactta-gaacttatcatattatttgtag 33760118  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     |||||||  |||||| ||||||||    
T  33760117 gcattttgctgttgtaagctattaa 33760093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 36943147 - 36943021
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| |||| ||||||| ||| | |||||||||| ||||||||||||||||||| ||| ||||   ||||| ||||||| |  |||||||||||||||||    
T  36943147 acattagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgactt-gaattttatcatattatttg 36943049  T
Q  109 tagacattttgtcgttgtatgctattaat 137  Q
    ||| |||| || || ||||||||||||||    
T  36943048 taggcattatgccg-tgtatgctattaat 36943021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 29574651 - 29574525
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  || ||||||||||||||| |||||||||| |||    ||| ||| | ||| |||||||| |||||||    
T  29574651 tcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgattta-gatttcatcatattttttgtag 29574553  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
     ||||||||| || ||||||||||||||    
T  29574552 tcattttgtcattatatgctattaattt 29574525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 29173739 - 29173617
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatca---tattatttgtaga 112  Q
    |||||||||| |||||||||| ||||| | |||||||||||||||||  |||||||   ||||| |||||||| | ||||||||   |||||||||||      
T  29173739 tcaattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgactta-gattttatcatattattatttgtatg 29173641  T
Q  113 cattttgtcgttgtatgctattaa 136  Q
    |||||||| |||||||| ||||||    
T  29173640 cattttgttgttgtatgttattaa 29173617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 39310884 - 39310778
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||||||||| |||||||| ||||||| || ||||| ||||| |||| || |||||   |||||||||||||| | |||||||||||    
T  39310884 agatcgacttcagtcaattacaaattcaatcattgatttgggcatcaacattgcacatcc-gaggcatgggtatttcagtgactta-gattttatcatat 39310787  T
Q  103 tatttgtag 111  Q
    |||||||||    
T  39310786 tatttgtag 39310778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 22538293 - 22538207
Alignment:
Q  49 aacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||   |||||||||| ||||| ||||||||   ||||||||||||||||||| | |||||||||||| ||||||||||    
T  22538293 aacgttgcagatatggaagcatgaatatttctgtgacttaaa-ttttatcatattatttgtaaatattttgtcgttgcatgctattaa 22538207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37994371 - 37994484
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| |||||| |||||||||  ||||| |||||||||||| |||| | ||| ||| | |||| ||||  |||||||||||||||||||| |||||||      
T  37994371 acaaattcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttaga-ttttatcatattatttgtaggcattttgct 37994469  T
Q  122 gttgtatgctattaa 136  Q
    ||| |||||||||||    
T  37994470 gttatatgctattaa 37994484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 10929742 - 10929865
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  | |||||||||||||||| ||||||||   |||   |||| |||   |||||||||||||||| |||    
T  10929742 tcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgattta-aattttatcatattatttatag 10929840  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     |||||||| |||| ||||||||||    
T  10929841 gcattttgttgttgaatgctattaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 28533898 - 28533854
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  28533898 ttttatcatattatttgtaggtattttgtcgttgtatgctattaa 28533854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 17994743 - 17994637
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| ||||||||||||||||  ||||||||||||| |||| ||| |||    ||||| ||||||||   |||||||||||||||||||| ||||||| |    
T  17994743 acaaattcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaa-ttttatcatattatttgtaggcattttgcc 17994645  T
Q  122 gttgtatg 129  Q
     |||||||    
T  17994644 attgtatg 17994637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 19597996 - 19598039
Alignment:
Q  93 tttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  19597996 tttatcatattatttgtagacattttaccgttgtatgctattaa 19598039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 42577268 - 42577315
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaatttagat 143  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  42577268 atcatattatttgtaggtattttgtcgttttatgctattaatttagat 42577315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 4100419 - 4100536
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||        ||||| ||||||||  | |||| |||||||| | |||||||||||||||||    
T  4100419 acatcagtcaattacaaattcaaccaatgatttggacgtca--------gatccggaagcatggta-tttcggtgacttaag-ttttatcatattatttg 4100508  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||| ||||||    
T  4100509 taggcattttgccgttgtatgatattaa 4100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 18695147 - 18695259
Alignment:
Q  28 tcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgta 127  Q
    |||||||||||||||  ||||||||||||||||| |||  |||||| |||||    ||||    |||||||||||||||| ||| ||||||||  |||||    
T  18695147 tcaatcaatgatttggtcgtcaacgttgcagatctagagccatgaatatttcgaccactttaa-ttttatcatattatttataggcattttgttcttgta 18695245  T
Q  128 tgctattaatttag 141  Q
    | ||||||||||||    
T  18695246 ttctattaatttag 18695259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 24461535 - 24461643
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||| ||||||||  || ||||||||||||||| ||||||| |  ||||  |||| ||||  ||| |||||||| |||||||  ||||||||||| |    
T  24461535 ttcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgatttaga-tttcatcatattttttgtaggtattttgtcgttat 24461633  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  24461634 atgctattaa 24461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 35220399 - 35220528
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttagg-cttttatcatat-tatt 106  Q
    ||||||||| ||||||| ||||| |||||||||| |||||||| |||||||||   |||||||   ||||| ||||||||   |||  | |||   ||||    
T  35220399 acatcagtccattacaaattcaaccaatgatttgggcgtcaactttgcagatcttaaagcatgggtatttctgtgacttaaatcttgaagcatgggtatt 35220498  T
Q  107 tgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||||||||||||||||||||    
T  35220499 tgtaggcattttgtcgttgtatgctattaa 35220528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 37416866 - 37416903
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatg 129  Q
    |||||||||||||||||||||||||||| |||||||||    
T  37416866 ttttatcatattatttgtagacattttgccgttgtatg 37416903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 6358825 - 6358781
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  6358825 ttttatcatattatttgtacgtattttgtcgttgtatgctattaa 6358781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 4264629 - 4264664
Alignment:
Q  93 tttatcatattatttgtagacattttgtcgttgtat 128  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4264629 tttatcatattatttgtaggcattttgtcgttgtat 4264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42698733 - 42698674
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||| ||||||||| |||||||| |||||||| |||||||  ||||| ||||||||||||    
T  42698733 agatcgacatcagtgaattacaaattcaatcagtgatttggacgtcagcgttgcagatcc 42698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 3725272 - 3725310
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccaga 65  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  3725272 ttcaatcaaagatttgagcgtcaacgttgtagatccaga 3725310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 28871811 - 28871737
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgact 86  Q
    |||||||||||||  ||||| |||||||||  ||||| ||||||||||| ||||| |||| | |||| |||||||    
T  28871811 tcagtcaattacagattcaaccaatgatttaggcgtcgacgttgcagattcagaatcatgtatattttagtgact 28871737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 41327898 - 41327944
Alignment:
Q  95 tatcatattatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    ||||||||||||||||| ||||||| | |||||||||||||| ||||    
T  41327898 tatcatattatttgtaggcattttggcattgtatgctattaacttag 41327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 25087129 - 25087170
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagc 68  Q
    ||||||||||||||||  |||||||||||||||| |||||||    
T  25087129 ttcaatcaatgatttggacgtcaacgttgcagattcagaagc 25087170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 34128628 - 34128571
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||||||||||| ||| ||||||||||  ||||| |||||| || |||||||||    
T  34128628 ttttatcatattatttataggcattttgtcgcagtatgttattaacttggatattgtg 34128571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 11833556 - 11833604
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||||||||| |||||||||| ||  | ||||||||||||||||    
T  11833556 agtcaattacaagttaaatcaatgatctggacatcaacgttgcagatcc 11833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 16376095 - 16376139
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||    
T  16376095 ttttatcatattatttgtagtcattttggtgttgtatgcgattaa 16376139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 21612394 - 21612437
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  21612394 ttttatcatattgtttgtagaaattt-gtcgttgtatgctattaa 21612437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 23933563 - 23933519
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  |||||| ||||||| ||||||||    
T  23933563 ttttatcatattatttgtaggaattttgccgttgtaagctattaa 23933519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 27949518 - 27949554
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcca 63  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  27949518 ttcaatcaaagatttgggcgtcaacgttgcagatcca 27949554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 30420769 - 30420805
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  30420769 gttcaatcaaagatttgggcgtcaacgttgcagatcc 30420805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 36234099 - 36234135
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  36234099 gttcaatcaaagatttgggcgtcaacgttgcagatcc 36234135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 38293640 - 38293676
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  38293640 gttcaatcaatgattcgagcgtcaacgttgtagatcc 38293676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 38575475 - 38575439
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  38575475 gttcaatcaaagatttgggcgtcaacgttgcagatcc 38575439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 41630559 - 41630696
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||   ||||| |||||||| | |||||||||||    
T  41630559 agatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttccgtgactta-gattttatcatat 41630657  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  41630658 tatttgtagacattttgtcgttgtatgctattaacttag 41630696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 38597860 - 38597986
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   |||||||||||||||| |||||||||||||||||    
T  38597860 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttagg-ttttatcatattatttg 38597958  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  38597959 taggcattttgccgttgtatgctattaa 38597986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 13007292 - 13007418
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  13007292 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttg 13007390  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  13007391 taggcattttgccgttgtatgctattaa 13007418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 31391777 - 31391639
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||  ||||| |||||||||| |||||||||||||| |||    
T  31391777 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttagg-ttttatcatattatatgt 31391679  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || ||||||   ||||||||||||||| || ||| |||||    
T  31391678 aggcatttttctgttgtatgctattaacttggatgttgtg 31391639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 34945456 - 34945582
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | ||||||||||||||||     
T  34945456 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattattta 34945554  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  34945555 taggcattttgtcgttgtatgctattaa 34945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 35850863 - 35850988
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||  |||||| |||||||||| |||||||||||||||||     
T  35850863 catcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttagg-ttttatcatattatttgc 35850961  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || || |||| |||| |||||||||||    
T  35850962 aggcactttgccgttttatgctattaa 35850988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 9113750 - 9113624
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||  | ||||| |||||||| | |||||||||||||||||    
T  9113750 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaag-ttttatcatattatttg 9113652  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||  ||||||||||||||||    
T  9113651 taggcatttttccgttgtatgctattaa 9113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 24229809 - 24229683
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||| ||||||||||| | |||||| | ||||| |||||||||| |||||||||||||||||    
T  24229809 acatcaatcaattacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttagg-ttttatcatattatttg 24229711  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  24229710 taggcattttgccgttgtatgctattaa 24229683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 7930234 - 7930358
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||  ||||  ||  |||||| |||||||||||    
T  7930234 agatcgacgtcagtcaattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttagg-ttttatcatat 7930332  T
Q  103 tatttgtagacattttgtcgttgtat 128  Q
    ||||||||| ||||||||||||||||    
T  7930333 tatttgtaggcattttgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 14082414 - 14082295
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||| | ||| ||| |||||| || |||||||||||||||| ||||||||   |||||| ||||||||| |||||||||||||||||||| |||    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttagg-ttttatcatattatttgtaggcat 14082316  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||||    
T  14082315 tttgtcgttgtatgctattaa 14082295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 19120978 - 19121104
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||| ||| |||||||| || |||||||||| |||||||| |||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19120978 tcagtcaattacaaattctatcaatgacttaagcgtcaacgctgcagatctagaaacatgaatatttcggtgacttagg-ttttatcatattatttgtag 19121076  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
    || |||||   ||||||| |||||||||    
T  19121077 acgttttgctcttgtatgatattaattt 19121104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 26878139 - 26877995
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||| |  |||||||||||||||| |||||||| |||||||||||||||||||   ||||  |||||||| | |||||||||||    
T  26878139 agatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgcagatccagaagcatgggtattttggtgactta-gattttatcatat 26878041  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| || ||||||||||||| ||||||| || ||| |||||    
T  26878040 tatttgtaggcactttgtcgttgtat-ctattaacttggatgttgtg 26877995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 28540928 - 28540805
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||   ||||  |||| ||| | ||| ||||||||||||||||    
T  28540928 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgattta-gatttcatcatattatttgtag 28540830  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
    |||||||  ||||||||||||||||    
T  28540829 acatttttccgttgtatgctattaa 28540805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 26825493 - 26825619
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||   |||||||||||||| |||||||   ||||| |||||||| | |||||||||||||||||    
T  26825493 acatcagtcaattacaaattcaaccaatgatttgtacgattacgttgcagatccataagcatgtttatttcggtgacttaag-ttttatcatattatttg 26825591  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  26825592 taggcattttgccgttgtatgctattaa 26825619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 13421990 - 13422135
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||| | ||||||||   ||||| ||||||||   |||||||||||    
T  13421990 agatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgactta-tattttatcatat 13422088  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||| ||||| ||||||  |||| ||||||||||| || ||| |||||    
T  13422089 tatatgtaggcatttttccgttttatgctattaacttggatgttgtg 13422135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 14726485 - 14726372
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||||||||| |||| ||||| |||||||||| | |||||||||| |||||| ||||||||  |||||  |||||||||| ||||||||||||||||||    
T  14726485 catcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-ttttatcatattatttgt 14726387  T
Q  110 agacattttgtcgtt 124  Q
    || ||||||||||||    
T  14726386 aggcattttgtcgtt 14726372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 1409555 - 1409687
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| |||||||||| |||||||||||||||  ||||||| |||||||||||  || |||||| |||| ||||||||| | ||| |||||||    
T  1409555 agatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatgaatattttagtgactta-gatttaatcatat 1409653  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| ||| |||||| ||||||| ||||||||    
T  1409654 tatttgaagatattttgccgttgtacgctattaa 1409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 6216961 - 6217088
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||   ||||| ||||||||   |||||||||||||||||    
T  6216961 acatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgactta-aattttatcatattatttg 6217059  T
Q  109 tagacattt-tgtcgttgtatgctattaa 136  Q
    ||| |||||  ||| ||||||||||||||    
T  6217060 taggcatttaagtcattgtatgctattaa 6217088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 11976959 - 11976821
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| ||||||||||  ||| ||||||| |||||  ||||||||  |||||| |||||||||| ||||||||||||||||||    
T  11976959 catcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgt 11976861  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || ||||||  |||| |||| |||||| || ||| |||||    
T  11976860 aggcattttcccgttttatgttattaacttggatgttgtg 11976821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 25980221 - 25980346
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||| | ||||||||   ||||| |||||||| | |||||||||||||||||    
T  25980221 acatcagtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatttc-gtgacttaag-ttttatcatattatttg 25980318  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| |||| |||||||||||    
T  25980319 taggcattttgccgttatatgctattaa 25980346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 38007422 - 38007546
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| || || ||||||||||  ||||||||||| |||||| ||||||||  |||||| |||| ||||| ||||||||||||||||||    
T  38007422 catcagtcaattacaaatttaaccaatgatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattagg-ttttatcatattatttgt 38007520  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| | || |||||||||||    
T  38007521 aggcattttg-ccttttatgctattaa 38007546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 10722818 - 10722950
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| ||||||| ||| || |||||||||||||||| |||||||||||| ||||||| |||||||   ||||| |||||||| | |||||||||||    
T  10722818 agatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgactta-gattttatcatat 10722916  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||  || |||||| ||||||    
T  10722917 tatttgtaggcatttttccgctgtatgttattaa 10722950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 35921003 - 35920895
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||| |||||||||||||||||| |||||||  | |||  ||||| || |  |||||||||||||||||||| ||||||||| ||||    
T  35921003 ttcaatcaatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgattttga-ttttatcatattatttgtaggcattttgtcattgt 35920905  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  35920904 atgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 15571561 - 15571676
Alignment:
Q  21 tacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgt 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||| |||||||||  | ||||||||||||   |||||||||||||||| ||||||||||      
T  15571561 tacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgactta-aattttatcatattatttatagacatttttc 15571659  T
Q  121 c-gttgtatgctattaa 136  Q
    | |||||||||||||||    
T  15571660 cagttgtatgctattaa 15571676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 6012163 - 6012037
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||| |||| |||||| ||||||||   |||||||||||||| | ||| |||||||||||||    
T  6012163 acatcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaag-tttgatcatattatttg 6012065  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||| |  |||| |||||||||||    
T  6012064 taggcattctaccgttttatgctattaa 6012037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 8096521 - 8096397
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||||| || ||  ||||  | ||||||||| ||||| ||||||||||||||||||    
T  8096521 catcaatcaattacaatttcaaccaatgatttgagcgtcaacattgcagaaccggagccatgtga-tttcagtgatttagg-ttttatcatattatttgt 8096424  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| | || |||||||||||    
T  8096423 aggcattttgccattttatgctattaa 8096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 2979328 - 2979192
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||| |   |||   |||| ||| | ||| ||||||||||||||||    
T  2979328 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtattctggtgattta-gatttcatcatattatttgtag 2979230  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     |||| || |||||||||||||||| || ||| |||||    
T  2979229 gcattgtgccgttgtatgctattaacttggatgttgtg 2979192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 19103489 - 19103366
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||||||  ||||||||||||||||||||  ||| | |||| ||| | ||| |||||||||||| |||    
T  19103489 tcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgattta-gatttcatcatattatttatag 19103391  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||  ||||||||||||||||    
T  19103390 gcatttttccgttgtatgctattaa 19103366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 39567336 - 39567458
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| ||||||||||||||||  ||||||| |||||||||||||| ||||   |||   |||| ||||  ||| ||||||||||||||||    
T  39567336 tcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttaga-tttcatcatattatttgtag 39567434  T
Q  112 acattttgtcgttgtatgctatta 135  Q
    |||||||||||||||||| |||||    
T  39567435 acattttgtcgttgtatgttatta 39567458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 7036276 - 7036408
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||| |||||||||||| || |||| |||||||| |||||||||||||||||||  |||||||   |||||   |||||| | |||||||||||    
T  7036276 agatcgacataagtcaattacaaattgaatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggactta-gattttatcatat 7036374  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    | |||||||  ||||||  |||||||||||||||    
T  7036375 tgtttgtaggaattttgctgttgtatgctattaa 7036408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 11867750 - 11867851
Alignment:
Q  47 tcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatatt 146  Q
    ||||||||||||||||| || ||||   ||||| || ||||||  |||||| ||||||||||||| |||||||| |||||||||||||||||| | ||||    
T  11867750 tcaacgttgcagatccaaaaacatgggtatttctgttacttaga-ttttattatattatttgtaggcattttgttgttgtatgctattaatttgggtatt 11867848  T
Q  147 gtg 149  Q
    |||    
T  11867849 gtg 11867851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 37986120 - 37986012
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||||||||||| ||| | ||| ||| |||||||  ||    |||| ||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  37986120 ttcaatcaatgatttgagtgtcgaagttacaggtccagaattataggtattttagtgacttagaattt-atcacattatttgtagacattttgtcgttgt 37986022  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  37986021 atgctattaa 37986012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 8088234 - 8088111
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||| || || ||  |||   |||| ||| | || |||||||||||||||||    
T  8088234 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgattta-gattatatcatattatttgtag 8088136  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| | ||||||||||||||    
T  8088135 gcattttgcctttgtatgctattaa 8088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 14211293 - 14211416
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| | ||||||||||||||  |||||||||||||||||||||||||||   |||   |||| ||| | ||| ||||||||||||||||    
T  14211293 tcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgattta-gatttcatcatattatttgtag 14211391  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||   |||||||||||||||    
T  14211392 gcatttttctgttgtatgctattaa 14211416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 2057827 - 2057789
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccaga 65  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  2057827 ttcaatcaaagatttgagcgtcaacgttgcagatccaga 2057789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 8514595 - 8514551
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||    
T  8514595 ttttatcatattatttgtaaatattttgtcgttgtatgttattaa 8514551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 31078362 - 31078318
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  31078362 ttttataatattatttatagacattttgtcattgtatgctattaa 31078318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 19100562 - 19100527
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgta 127  Q
    |||||||||||||||||||||||||||||| |||||    
T  19100562 ttttatcatattatttgtagacattttgtcattgta 19100527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 13468689 - 13468810
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||||||| ||| ||||||||||||||| | ||| ||| |  ||||   | ||||  | |||||||||||||| ||||| |||||||||||  |    
T  13468689 ttcaatcaatgattcgagtgtcaacgttgcagattcggaaacatcagtattttgatcactttag-ttttatcatattatgtgtaggcattttgtcgtcat 13468787  T
Q  127 atgctattaatttagatattgtg 149  Q
    |||||||||| || ||| |||||    
T  13468788 atgctattaactttgattttgtg 13468810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 781478 - 781519
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagc 68  Q
    |||||||||  ||||||||||||||||||||||||| |||||    
T  781478 ttcaatcaaaaatttgagcgtcaacgttgcagatccggaagc 781519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 35475327 - 35475286
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagc 68  Q
    ||||||||| |||||| ||||||||||||||||| |||||||    
T  35475327 ttcaatcaaagatttgggcgtcaacgttgcagattcagaagc 35475286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 9762396 - 9762352
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| |||||||||||||||| |||||||||||  ||||||||    
T  9762396 ttttattatattatttgtagacactttgtcgttgttagctattaa 9762352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 19259801 - 19259765
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcca 63  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  19259801 ttcaatcaaagatttgggcgtcaacgttgcagatcca 19259765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 56040671 - 56040545
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||   ||||| |||||||||| |||||||||||||||||    
T  56040671 acatcagtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttagg-ttttatcatattatttg 56040573  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  56040572 taggcattttgtcgttgtatgctattaa 56040545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 21662521 - 21662647
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||    
T  21662521 acatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttg 21662619  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    |||||| ||||  |||||||||||||||    
T  21662620 tagacactttggtgttgtatgctattaa 21662647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 21671285 - 21671411
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||    
T  21671285 acatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttg 21671383  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    |||||| ||||  |||||||||||||||    
T  21671384 tagacactttggtgttgtatgctattaa 21671411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 53811112 - 53811238
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||| |||||||| | |||||||||||||||||    
T  53811112 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattatttg 53811210  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  53811211 taggcattttggcgttgtatgctattaa 53811238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 43095706 - 43095841
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||||||||| |||||||||||||  |||||||  ||||||||| ||||||||| ||||||| ||||||| | |||||||||||    
T  43095706 agatcgacatcagtcaattacaagttaaatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgactta-gattttatcatat 43095804  T
Q  103 tatttgtagacattttgtcgttgtatgctattaattt 139  Q
     ||||||||  ||||||| ||||||||||||||||||    
T  43095805 catttgtaggtattttgtagttgtatgctattaattt 43095841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 4142777 - 4142659
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||||  ||||| |||||||| | |||||||||||||||||    
T  4142777 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaag-ttttatcatattatttg 4142679  T
Q  109 tagacattttgtcgttgtat 128  Q
    ||||||||||| ||||||||    
T  4142678 tagacattttgccgttgtat 4142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 22611267 - 22611393
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||| |||||||| | |||||||||||||||||    
T  22611267 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattatttg 22611365  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||| ||||||    
T  22611366 taggcattttgccgttgtatggtattaa 22611393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 19853537 - 19853411
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||     
T  19853537 acatcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaag-ttttatcatattatttc 19853439  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  19853438 taggcattttgccgttgtatgctattaa 19853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 32766598 - 32766724
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||||||||||||||  |||||| ||||||||||| ||| ||||   ||||| |||||||| | |||||||||||||||||    
T  32766598 acatcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaag-ttttatcatattatttg 32766696  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||| |||||||||||||||||||    
T  32766697 taggcattatgtcgttgtatgctattaa 32766724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 53444203 - 53444328
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| ||||||| |||| |||||| ||||||||  |||||| |||||||||| ||||||||||||||||||    
T  53444203 catcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttagg-ttttatcatattatttgt 53444301  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    ||| |||||  |||| |||||||||||    
T  53444302 agatatttttccgttttatgctattaa 53444328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 9178431 - 9178563
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| |||||||||| | |||||||| |||||||| |||||||||||||||  ||||||  |  ||||||| ||||| || |||||||||||    
T  9178431 agatcgacatcaatcaattacaaatccaatcaataatttgagcatcaacgttgcagatctggaagcaaaagtatttcagagacttcgg-ttttatcatat 9178529  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||||||||||||||||||    
T  9178530 tatttgtaggcattttgtcgttgtatgctattaa 9178563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 24099092 - 24098967
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||| ||||   |||||||||||||||| |||||||||||||||||    
T  24099092 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttagg-ttttatcatattatttg 24098994  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||| ||||||||||    
T  24098993 taggcattttgccgttg-atgctattaa 24098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 33921151 - 33921277
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||   |||||||||||||| | |||||||||||||||||||| |||| | |     
T  33921151 acaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgactta-gattttatcatattatttgtaggcattgtata 33921249  T
Q  122 gttgtatgctattaatttagatattgtg 149  Q
    ||||||||||||||| || ||| |||||    
T  33921250 gttgtatgctattaacttggatgttgtg 33921277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 10258927 - 10258802
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||| |||||||||||| |||||||||||||||| ||| |||||||||| | || |||||||||| ||||  |||||||| | |||||||||||    
T  10258927 agatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgcatacccggaagcatgaatattttggtgactta-gattttatcatat 10258829  T
Q  103 tatttgtagacattttgtcgttgtatg 129  Q
    |||||||||||||||||  ||||||||    
T  10258828 tatttgtagacattttgctgttgtatg 10258802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 54021938 - 54022069
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| || |||||||||||||   |||||||||||||||||  || |||| | ||||| |||||||| | |||||||||||    
T  54021938 agatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgactta-gattttatcatat 54022036  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| |||||||||||||| ||||||    
T  54022037 tatttgtagaca-tttgtcgttgtatgttattaa 54022069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 26633696 - 26633557
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||| ||||||| ||||| ||||||||||  |||||| ||||||||||| |||||||||| ||||| |||||||||| |||||||||||||  |     
T  26633696 acatcagtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttagg-ttttatcatattaaata 26633598  T
Q  109 tagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||| ||||||  |||||||||||||||  |||||| |||||    
T  26633597 taggcattttaccgttgtatgctattagcttagatgttgtg 26633557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 10496420 - 10496545
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||||||||||  |||||||   ||||| |||| ||||| ||||||||||||||||||    
T  10496420 catcagtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttagg-ttttatcatattatttgt 10496518  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || |||||||  || ||||||||||||    
T  10496519 aggcattttgctgtcgtatgctattaa 10496545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 35348396 - 35348517
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| ||||| ||||||| ||   ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||||||||||||||| |    
T  35348396 agtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttagg-ttttatcatattatttgtaggc 35348494  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||| | || |||||||||||    
T  35348495 attttgccattttatgctattaa 35348517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 45418609 - 45418722
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| |||||||||||||||| || ||||||||||||||||  |||||  |  ||||| |||||||||  |||||||||||||||||||| |||||||||    
T  45418609 acaaattcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttaga-ttttatcatattatttgtaggcattttgtc 45418707  T
Q  122 gttgtatgctattaa 136  Q
    |||||||||||||||    
T  45418708 gttgtatgctattaa 45418722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 2520863 - 2520989
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| || || ||||||||||  |||||||||||||||||| ||||||||   ||||| |||| ||| | ||||||| |||||||||    
T  2520863 acatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgattta-gattttatcgtattatttg 2520961  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  2520962 taggcattttgccgttgtatgctattaa 2520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 13634199 - 13634325
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||| ||||||  |||||||||||||||||| ||| ||||   |||||||||| ||||| ||||||| |||||||||    
T  13634199 acatcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttagg-ttttatcttattatttg 13634297  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    |||  |||||| ||||||||||||||||    
T  13634298 tagttattttgccgttgtatgctattaa 13634325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 21686267 - 21686141
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| ||| |||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||  |||| ||||| |||||||||||||||||    
T  21686267 acatcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttagg-ttttatcatattatttg 21686169  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| || |||||| ||||||    
T  21686168 taggcattttgccgctgtatgttattaa 21686141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 8670570 - 8670678
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||  |||||||  |||||| ||||||||||  ||||||||||||||||     
T  8670570 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttagg-atttatcatattatttga 8670668  T
Q  110 agacattttg 119  Q
    || |||||||    
T  8670669 aggcattttg 8670678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 47320435 - 47320311
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || ||||||||||||||||    
T  47320435 atcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatattatttgta 47320337  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  47320336 ggcattttgccgttgtatgctattaa 47320311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 56156667 - 56156543
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||| | |||||||| |||||||||  ||||||||  |||||| |||||||| | ||||||||  |||||||    
T  56156667 acatcagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatgtgaatttcggtgacttatg-ttttatcaatttatttg 56156569  T
Q  109 tagacattttgtcgttgtatgctatt 134  Q
    ||| ||||||| |||| |||||||||    
T  56156568 taggcattttgccgttttatgctatt 56156543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 17949349 - 17949223
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||| |||   ||||   ||||||||| |||||||||||||| ||    
T  17949349 acatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttagg-ttttatcatattatatg 17949251  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||||  ||||||| ||||||    
T  17949250 tatgcattttgttcttgtatgttattaa 17949223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 17953201 - 17953075
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||| |||   ||||   ||||||||| |||||||||||||| ||    
T  17953201 acatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttagg-ttttatcatattatatg 17953103  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||||  ||||||| ||||||    
T  17953102 tatgcattttgttcttgtatgttattaa 17953075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 29120375 - 29120278
Alignment:
Q  38 atttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| |||||||| |||||||||  |||||||||  ||||| || ||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttaga-ttttatcatattatttgtaggcattttgtcgttgtatgctattaa 29120278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 26090945 - 26090806
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggc---ttttatca 99  Q
    |||| ||||||||||||||| || |||||  ||||||||| |||||||||||||| || | |||||||    ||||| |||||||||     ||||||||    
T  26090945 agatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatttcggtgacttagatatattttatca 26090846  T
Q  100 tattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    ||||||||| ||| || |||||||||||||||||||||||    
T  26090845 tattatttgcagatatattgtcgttgtatgctattaattt 26090806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 27652036 - 27652153
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| |||||||||||||||| |  |||||||||||||||||||||||||   |||  ||||  ||  | ||| |||||||||||||||||||||    
T  27652036 caatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg--tttagatttcatcatattatttgtagacatt 27652133  T
Q  117 ttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||    
T  27652134 ttgccgttgtatgctattaa 27652153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 43510281 - 43510399
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||| |||||| || ||  |||||||||  |||||| ||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  43510281 acatcagtca-ttacaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaag-ttttatcatattatttg 43510378  T
Q  109 tagacattttgtcgttgtatg 129  Q
    ||| |||||||||||||||||    
T  43510379 taggcattttgtcgttgtatg 43510399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 52060945 - 52060819
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  |||||||||||||||| ||||  | |||| ||||| ||||||||| | |||||| ||||||  |  ||||||||||| |||||||    
T  52060945 tcagtcaattacagattcaatcaatgatttgggcgttgatgttgtagatctagaagcatggatatttcaatgactt-tgaatttatcatattttttgtag 52060847  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
     |||||||| ||||||| ||||||||||    
T  52060846 gcattttgttgttgtatactattaattt 52060819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 31891309 - 31891186
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| ||||| | |||||||| |||||||||||||| ||||||||||||||  |||   |||| ||| | ||| || |||||||||||||    
T  31891309 tcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgattta-gatttcattatattatttgtag 31891211  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  31891210 gcattttgccgttgtatgctattaa 31891186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 29960974 - 29960848
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| ||||||| || ||||| | |||||||  || |||||||||||||||| ||| ||| || |||| ||||| ||||  |||||||||| ||||||    
T  29960974 acatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgatttaga-ttttatcatactatttg 29960876  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||| ||||    
T  29960875 taggcattttgccgttgtatgcttttaa 29960848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 36194801 - 36194931
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| ||||||||||||||||| | |||| ||||||||||||||| ||||   |||   |||| ||||  ||| |||||||||||||||| ||||    
T  36194801 caatcacaaattcaatcaatgatttga-catcaaagttgcagatccagaaacatgggtattctggtgatttaga-tttcatcatattatttgtaggcatt 36194898  T
Q  117 ttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||| |||||||||||||||| || ||| |||||    
T  36194899 ttgccgttgtatgctattaacttggatgttgtg 36194931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 36204391 - 36204265
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||   ||| |||   |||| ||||  ||||||||||||||||||||| |||||| |    
T  36204391 acaaattcaatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttaga-ttttatcatattatttgtagatattttgcc 36204293  T
Q  122 gttgtatgctattaatttagatattgtg 149  Q
     || |||| ||||||||| ||| |||||    
T  36204292 attatatgttattaatttggatgttgtg 36204265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 7008932 - 7008870
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtgtgttc 154  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||| ||||    
T  7008932 ttttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagttc 7008870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 6155163 - 6155122
Alignment:
Q  95 tatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaa 6155122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 9714004 - 9714113
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||  ||||| |  | |||  ||||| ||||  |||||||||||||||||||| ||||    
T  9714004 caatcacaaattcaatcaacgatttgggcgtcaacgttgcagatctggaagcgt--atattctagtgaattaga-ttttatcatattatttgtaggcatt 9714100  T
Q  117 ttgtcgttgtatg 129  Q
    ||||| |||||||    
T  9714101 ttgtcattgtatg 9714113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 37030363 - 37030471
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  | || |||||||||||| | || ||||   |||||||||||||||   || |||||||||||||||||||||| | | ||||    
T  37030363 ttcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttcagtgacttagaaatt-atcatattatttgtagacatttagccattgt 37030461  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  37030462 atgctattaa 37030471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 52944398 - 52944530
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||| ||||||||  |||||||||||||||||| ||||||||   |||   |||| ||| | ||| |||||||| |||||||    
T  52944398 tcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgattta-gatttcatcatattttttgtag 52944496  T
Q  112 acattttgtcgttgtatgctattaatttagatat 145  Q
     |||||||| ||| ||||||||||| || |||||    
T  52944497 gcattttgtagttatatgctattaacttggatat 52944530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 22305564 - 22305520
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  22305564 ttttatcatattatttgtaggtattttgtcgttgtatgctattaa 22305520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 36161798 - 36161921
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  || ||||||| |||||||  || |||||  ||||  |||| ||||  ||||||||||||||||||||    
T  36161798 tcagtcaatcacatattcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttaga-ttttatcatattatttgtag 36161896  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||| |||||| |||| ||||||    
T  36161897 gcatttggtcgttatatgttattaa 36161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 37465648 - 37465692
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  37465648 ttttatcatattatttgtaagcattttgtcgttgtatgctattaa 37465692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 12199715 - 12199617
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||| |||||  ||||||||| |||||||||||| ||||| ||||| | ||||||||| |||||  | |||||| |  |||||||||||||||||||    
T  12199715 tcagtcagttacagattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgactta-gaatttatcatattatttgtag 12199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 4821081 - 4821139
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaat-ttagatattgtg 149  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||  |||||||||||    
T  4821081 ttttatcatattatttgtagacattttatcgttgtatgtaattaataatagatattgtg 4821139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 55228084 - 55228181
Alignment:
Q  31 atcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatg 129  Q
    |||||||||||| |||||||||||| | ||||  ||||||||   ||   |||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  55228084 atcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttaga-tttaatcatattatttgtagacattttgtcgttgtatg 55228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 9048751 - 9048796
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgca 57  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||    
T  9048751 tcagttaatcacaaattcaatcaatgatttgagcgtcaacgttgca 9048796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 36184697 - 36184754
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||| || ||| |||||    
T  36184697 ttttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttgtg 36184754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 37684026 - 37684067
Alignment:
Q  95 tatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  37684026 tatcatattatttgttgacattttgtcgttgtgtgctattaa 37684067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 42032535 - 42032428
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||| ||||||||| | | |||||||| ||||||||||||||||  || |  |||| ||||  | ||||||||||||| |||| ||||||| ||||||    
T  42032535 ttcaataaatgatttgggtgccaacgttgaagatccagaagcatgagtatctt-gtgatttaga-tgttatcatattattggtagccattttgccgttgt 42032438  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  42032437 atgctattaa 42032428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 48257575 - 48257518
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| || ||| |||||    
T  48257575 ttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtg 48257518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 49072688 - 49072631
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||| ||| || |||||    
T  49072688 ttttatcgtattatttgtagacattttattgttgtatgctattaacttaaatgttgtg 49072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 12265554 - 12265598
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  12265554 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggcatg 12265598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 26123426 - 26123470
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||| || |||| |||||||||||||||    
T  26123426 ttttatcatattatttgtagatatattgttgttgtatgctattaa 26123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 50766502 - 50766466
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| ||||||||||||||||||||||||||    
T  50766502 gttcaatcaaagatttgagcgtcaacgttgcagatcc 50766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 10389743 - 10389708
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||| ||||||||||||||||||||||||||    
T  10389743 ttcaatcaacgatttgagcgtcaacgttgcagatcc 10389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 34024427 - 34024392
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||| ||||||||||||||||||||||||||    
T  34024427 ttcaatcaacgatttgagcgtcaacgttgcagatcc 34024392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 18995532 - 18995570
Alignment:
Q  45 cgtcaacgttgcagatccagaagcatgaaaatttcagtg 83  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  18995532 cgtcaacgttgcagatccagaaacatgaatatttcagtg 18995570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 43353542 - 43353512
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgca 57  Q
    |||||||||||||||||||||||||||||||    
T  43353542 ttcaatcaatgatttgagcgtcaacgttgca 43353512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 1621511 - 1621472
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaag 67  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  1621511 ttcaatcaatgatttgggcgt-aacgttgcagatccagaag 1621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 33332576 - 33332540
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcca 63  Q
    ||||||||||||||||  |||||||||||||||||||    
T  33332576 ttcaatcaatgatttggacgtcaacgttgcagatcca 33332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 35964964 - 35964904
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgactt 87  Q
    ||||||||| ||||||  |||||||||||||||||| || ||||||  |||||||| ||||    
T  35964964 ttcaatcaaagatttggacgtcaacgttgcagatccggaggcatgagtatttcagtcactt 35964904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 44596826 - 44596870
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  |||||  ||||||||||||||||    
T  44596826 ttttatcatattatttgtagctattttaccgttgtatgctattaa 44596870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 47417761 - 47417797
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  47417761 gttcaatcaaagatttgggcgtcaacgttgcagatcc 47417797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 53616640 - 53616604
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  53616640 gttcaatcaaagatttgggcgtcaacgttgcagatcc 53616604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 55580372 - 55580408
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtat 128  Q
    |||| |||| |||||||||||||||||||||||||||    
T  55580372 ttttgtcatgttatttgtagacattttgtcgttgtat 55580408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 23230709 - 23230835
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||    
T  23230709 acatcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttg 23230807  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  23230808 taggcattttgtcgttgtatgctattaa 23230835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 27110494 - 27110362
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||   |||| ||||||||| | |||||||||||    
T  27110494 agattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgactta-gattttatcatat 27110396  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| |||||||||||||||||    
T  27110395 tatttgtagacattttatcgttgtatgctattaa 27110362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 7677306 - 7677180
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||    
T  7677306 acatcagtcaattacagattcgaccaatgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttagg-ttttatcatattatttg 7677208  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||| ||||||||| ||||||    
T  7677207 taagcattttgccgttgtatgttattaa 7677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 20553262 - 20553138
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||| |||||||||| |||||||||||||||||||    
T  20553262 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgta 20553164  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  20553163 ggcattttgccgttgtatgctattaa 20553138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 29939369 - 29939505
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||| | ||||| |||||||||| |||| ||||||||| ||||| ||||||||  |||||||||||||||| ||||||||||||||||||||    
T  29939369 tcagtcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttagg-ttttatcatattatttgtag 29939467  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     ||||||| ||||||||| |||||| |||||| |||||    
T  29939468 tcattttgccgttgtatgatattaacttagatgttgtg 29939505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 31013631 - 31013505
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||||||| || ||||||||||||||||  |||||||||||||||| | ||||||||   |||||||||||||| | |||||||||||||||||    
T  31013631 acatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaag-ttttatcatattatttg 31013533  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  31013532 taggcattttgccgttgtatgctattaa 31013505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 3673501 - 3673633
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| |  |||||||| |||| ||||||||||||||||||| |||||||||  |||||||||||||| | ||| |||||||    
T  3673501 agatcgacatcagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaag-tttaatcatat 3673599  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| |||||||| |||||||    
T  3673600 tatttgtaggcattttgccgttgtatcctattaa 3673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 20559765 - 20559641
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||||||||||     
T  20559765 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgtg 20559667  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  20559666 ggcattttgccgttgtatgctattaa 20559641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 20571327 - 20571203
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||||||||||     
T  20571327 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttagg-ttttatcatattatttgtg 20571229  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  20571228 ggcattttgccgttgtatgctattaa 20571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 37971349 - 37971475
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||| |||||  ||||| |||||||||| |||||||| ||||||||    
T  37971349 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttagg-ttttatcacattatttg 37971447  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  37971448 taggcattttgccgttgtatgctattaa 37971475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 33214691 - 33214568
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||| ||||| |||||||||| || |||||||||||||||| ||||||||  ||||||  ||||||| | |||||||||||||||| |||    
T  33214691 tcagtcaattacaaattcaaccaatgatttgggcttcaacgttgcagatccggaagcatgtgaatttcgatgacttatg-ttttatcatattatttttag 33214593  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
    |||||||| |||| |||||||||||    
T  33214592 acattttgccgttttatgctattaa 33214568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 9637432 - 9637306
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||| ||||||||   |||| ||||||||||||||||||||||||||| | ||| |||||  ||||| || ||||||| ||||||||||||||||     
T  9637432 acatcagttaattacaaacacaattaatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttagg-ttttatcatattatttt 9637334  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  9637333 taggcattttgtcgttgtatgctattaa 9637306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 17693643 - 17693497
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| |||||||| |||||||||| |||||||||  |||||  ||||||| | |||||||||||    
T  17693643 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatg-ttttatcatat 17693545  T
Q  103 tatttgtagaca-ttttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| || |||||| |||||||| |||||| || ||| |||||    
T  17693544 tatttgtaggcatttttgttgttgtatgttattaacttggatgttgtg 17693497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 45445833 - 45445695
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| | |||| ||||||||  |||||  |||||||| | ||||||||||||||||||    
T  45445833 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgactta-gattttatcatattatttgt 45445735  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || |||||||| ||| ||||||||||| || ||| |||||    
T  45445734 aggcattttgttgttttatgctattaacttggatgttgtg 45445695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 24186690 - 24186553
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||  |||||||   ||||||||||||||   |||||||||||    
T  24186690 agattgacatcagtcaattataagttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgactta-aattttatcatat 24186592  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    ||||| ||| ||||||| ||| |||| ||||||| ||||    
T  24186591 tatttataggcattttgccgtcgtatactattaacttag 24186553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 16928786 - 16928654
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| ||||||||||  | ||||||||||||||||  |||| ||   ||||| |||||||||| |||||||||||    
T  16928786 agatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttagg-ttttatcatat 16928688  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| | ||||||||||||||    
T  16928687 tatttgtaggcattttgccattgtatgctattaa 16928654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 28897769 - 28897901
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||| ||||||||| ||||||||| |||| |||||||||||| | |||| ||  |||||||  ||||||| | |||||||||||    
T  28897769 agatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgttgcagatacggaagtattgaaatttcgatgactta-gattttatcatat 28897867  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||| || |||||||||||    
T  28897868 tatttgtagtcattttgtcattctatgctattaa 28897901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 10377755 - 10377881
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||||||| || ||||| ||||||||||  | |||||||||||||||| ||||||||   ||||| | |||||| | |||||||||||||||||    
T  10377755 acatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaag-ttttatcatattatttg 10377853  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  10377854 taggcattttgccgttgtatgctattaa 10377881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 30568335 - 30568218
Alignment:
Q  18 aattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattt 117  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||  ||||||||  ||||||  ||||||||| ||||||||| |||||||||| |||||    
T  30568335 aattacaaattcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttagg-ttttatcatgttatttgtaggcattt 30568237  T
Q  118 tgtcgttgtatgctattaa 136  Q
    || |||| |||||||||||    
T  30568236 tgccgttttatgctattaa 30568218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 40619091 - 40618970
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||  |||||   ||||||   |||||||||||||| ||||  |    
T  40619091 agtcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagactta-aattttatcatattatgtgtatgc 40618993  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||| ||||||||||||||||    
T  40618992 attttgccgttgtatgctattaa 40618970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 28086842 - 28086709
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| ||||| |||||||| ||||||||||||||||   |||||||||||||||||  || |||    |||||||||| ||  | |||||||||||    
T  28086842 agatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatat 28086743  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||||||||||||||||||    
T  28086742 tatttgtaggcattttgtcgttgtatgctattaa 28086709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 5046822 - 5046945
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  |||||||||| |||||  |||| ||||||||||| || || |||||| |||||||||||||| |  |||||||||||||||||||    
T  5046822 tcagtcaattacagattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgactta-gaatttatcatattatttgtag 5046920  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     |||||| |||||||||| ||||||    
T  5046921 gcattttatcgttgtatgttattaa 5046945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 7198200 - 7198089
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||   ||||||||||||||||| |||||||||| ||||  |||| ||||  ||||||||||||||||| ||  |||||||||||||    
T  7198200 ttcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttaga-ttttatcatattatttgcaggaattttgtcgttgt 7198102  T
Q  127 atgctattaattt 139  Q
    |||||||||||||    
T  7198101 atgctattaattt 7198089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 7883257 - 7883138
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||| ||||| |||| |||||  ||||| |||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||||| |||    
T  7883257 tcaattacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttgtaggcat 7883159  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||| |||||||| |||||||    
T  7883158 tttgccgttgtatcctattaa 7883138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 14544932 - 14544825
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||  |||||| ||||||||   |||||||||||    
T  14544932 agatcgacatcaatcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgactta-aattttatcatat 14544834  T
Q  103 tatttgtag 111  Q
    |||||||||    
T  14544833 tatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 15344377 - 15344500
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || |||||||||||||||||    
T  15344377 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatattatttgtag 15344475  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  15344476 gcattttgtcgttgtatgctattaa 15344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 15433442 - 15433565
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || |||||||||||||||||    
T  15433442 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatattatttgtag 15433540  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  15433541 gcattttgtcgttgtatgctattaa 15433565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 15524746 - 15524869
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || |||||||||||||||||    
T  15524746 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatattatttgtag 15524844  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  15524845 gcattttgtcgttgtatgctattaa 15524869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 18890719 - 18890596
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| |||    |||   |||| ||||  ||||||||||||||||||||    
T  18890719 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttaga-ttttatcatattatttgtag 18890621  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  18890620 gcattttgtcgttgtatgctattaa 18890596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 40211325 - 40211198
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||| ||||||| ||| | |||||||||| |||||||||||| |||||| |||||||||  |||||  |||||| || |||||||||||||||||    
T  40211325 acatcagtcgattacaaattccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgactt-ggattttatcatattatttg 40211227  T
Q  109 tagacattttgtcgttgtatgctattaat 137  Q
    ||  |||| || |||||||||||||||||    
T  40211226 taagcattatgccgttgtatgctattaat 40211198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 5333498 - 5333623
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||||||||| ||||| |||||||||||| ||||||||||||||||  |||  ||||| ||| | |||| ||||||||||||||     
T  5333498 tcagtcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgattta-gattttgtcatattatttgtat 5333596  T
Q  112 acattttgtcgttgtatgctattaatt 138  Q
     |||||||| |||||||||||||||||    
T  5333597 gcattttgttgttgtatgctattaatt 5333623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 16247252 - 16247120
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| | |||||||| |||||||||||||||| || |||| ||||||||||| ||||||||   |||||  ||||||| | ||| |||||||    
T  16247252 agatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgactta-gatttgatcatat 16247154  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| || ||||||| ||||||||||||||||    
T  16247153 tatttgaaggcattttgccgttgtatgctattaa 16247120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 43834016 - 43833893
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||   ||||||||||||||||| ||||||||||  |||   |||| ||||  ||||||||||||||||||||    
T  43834016 tcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtgatttagt-ttttatcatattatttgtag 43833918  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  43833917 gcattttgccgttgtatgctattaa 43833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 41896586 - 41896709
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||| ||||||||  || ||||||||||||||| ||||||||||  |||   |||| ||||  ||| ||||||||||||||||    
T  41896586 tcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagtattctggtgatttaga-tttcatcatattatttgtag 41896684  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||||||||||||||||    
T  41896685 gcattttgtcgttgtatgctattaa 41896709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 29617294 - 29617158
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||||||||| || |||    |||   |||| ||||  ||||||||||||||||||||    
T  29617294 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttaga-ttttatcatattatttgtag 29617196  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     |||||||| ||||||||||||||| ||| || |||||    
T  29617195 gcattttgttgttgtatgctattaacttaaatgttgtg 29617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 33347541 - 33347413
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||||||||||||||  ||||| ||||||| |||||  |||||||   ||||| |||||| ||  ||| ||||||||||||||||    
T  33347541 tcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaattt-atcatattatttgtag 33347443  T
Q  112 acattttgtcgttgtatgctattaatttag 141  Q
     ||||||||| |||||||||||||| ||||    
T  33347442 gcattttgtcattgtatgctattaaattag 33347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 1239417 - 1239294
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||| ||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || ||||||| |||||||||    
T  1239417 tcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatactatttgtag 1239319  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  1239318 gcattttgacgttgtatgctattaa 1239294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 39657538 - 39657649
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||||   |||   |||| ||| | ||| |||||||||||||||| ||||||| ||||||    
T  39657538 ttcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgattta-gatttcatcatattatttgtaggcattttgccgttgt 39657636  T
Q  127 atgctattaattt 139  Q
    || |||| |||||    
T  39657637 attctatcaattt 39657649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 42046290 - 42046413
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||   |||   |||| ||| | ||| ||||||||||||||||    
T  42046290 tcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtgattta-gatttcatcatattatttgtag 42046388  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| | | ||||||||||||    
T  42046389 gcattttgacatcgtatgctattaa 42046413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 1236717 - 1236594
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||| ||  ||||||||||||||||||||||||| ||  |||   |||| ||| | || ||||||| ||||| |||    
T  1236717 tcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgattta-gattatatcatactatttttag 1236619  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  1236618 gcattttgccgttgtatgctattaa 1236594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 14585746 - 14585869
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||| |||||||  |||||||||||||||||||||||||||   ||    |||| ||| | ||| ||||||||||||||||    
T  14585746 tcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtgattta-gatttcatcatattatttgtag 14585844  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     | ||||| ||||||||||||||||    
T  14585845 gcgttttgccgttgtatgctattaa 14585869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 25191089 - 25190980
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgat--ttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    |||||||||||||  | ||||| |||||||  ||| |||||||||||| |||||| ||||||||  |||| |  ||||||||| ||||||||||||||||    
T  25191089 catcagtcaattatgaattcaaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttagg-ttttatcatattattt 25190991  T
Q  108 gtagacatttt 118  Q
    |||| ||||||    
T  25190990 gtaggcatttt 25190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 20227219 - 20227173
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatt 138  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  20227219 ttttatcatattatttgtagacatttcgttgttgtatgctattaatt 20227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 14916192 - 14916085
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||| | ||||||||||| |||||||||| ||||   ||| ||||  |||||||||||| ||||||| |||||||  |||||    
T  14916192 ttcaatcaatgatttggacgtccatgttgcagatccggaagcatgaatatttgt-tgatttaga-ttttatcatattgtttgtaggcattttgcagttgt 14916095  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  14916094 atgctattaa 14916085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 471171 - 471127
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  471171 ttcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatg 471127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 8867884 - 8867995
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| |||||||||||||||| || |||| |||| |||||  ||||| || | |||   |||| ||||  |||||||||||||||||||| |||||||||    
T  8867884 acaaattcaatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttaga-ttttatcatattatttgtaggcattttgtc 8867982  T
Q  122 gttgtatgctatt 134  Q
    |||||||| ||||    
T  8867983 gttgtatgttatt 8867995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 8441345 - 8441396
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagat 143  Q
    ||||||||||||||||| ||  ||||| ||||||||||||||||||||||||    
T  8441345 ttttatcatattatttgcaggtattttatcgttgtatgctattaatttagat 8441396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 41060204 - 41060157
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    |||||||||||||||||||| |||||||| |||||||||||| |||||    
T  41060204 ttttatcatattatttgtagccattttgttgttgtatgctatcaattt 41060157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 24099260 - 24099172
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||||||||||  |||||||||||||||||| |||| | ||| ||||  |||| ||| | ||||||||||||||||||||    
T  24099260 acaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgattta-gattttatcatattatttgtag 24099172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 34609913 - 34610028
Alignment:
Q  20 ttacaagttcaatcaatgatttgagcgtcaacgttgcagatcc-agaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatttt 118  Q
    |||||| | |||||||||||||| |||| |||||||||||| | |||| |||||  ||| | |||| ||||| |||||||||||||||  ||| ||||||    
T  34609913 ttacaaatgcaatcaatgatttgggcgtgaacgttgcagattcgagaa-catgagtattccggtgatttagg-ttttatcatattattaataggcatttt 34610010  T
Q  119 gtcgttgtatgctattaa 136  Q
    | ||||| ||||||||||    
T  34610011 ggcgttgaatgctattaa 34610028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 21237874 - 21237918
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||    
T  21237874 ttcaatcaatgatttggacgtcaatgttgcagatccagaagcatg 21237918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 28239928 - 28239972
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  28239928 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggcatg 28239972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 35283304 - 35283260
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||    
T  35283304 ttttatcatattatttgtatatattttatcgttgtatgctattaa 35283260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 14913236 - 14913279
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctatta 135  Q
    ||||||||||||||||||||  |||||| |||||||||||||||    
T  14913236 ttttatcatattatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 14906913 - 14906879
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagat 60  Q
    ||||||||||||||||| |||||||||||||||||    
T  14906913 gttcaatcaatgatttgggcgtcaacgttgcagat 14906879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 17427133 - 17427091
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaatt 138  Q
    |||||||||||| ||| | ||||||||||||||||||||||||    
T  17427133 atcatattatttataggcgttttgtcgttgtatgctattaatt 17427091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 17430783 - 17430741
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaatt 138  Q
    |||||||||||| ||| | ||||||||||||||||||||||||    
T  17430783 atcatattatttataggcgttttgtcgttgtatgctattaatt 17430741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 24419106 - 24419064
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctatt 134  Q
    ||||||| ||||||||||||||||||||||  |||||||||||    
T  24419106 ttttatcttattatttgtagacattttgtcaatgtatgctatt 24419064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 8443531 - 8443474
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagca 69  Q
    ||||||||| |||  ||||||||||||||||  | |||||||||||||||| ||||||    
T  8443531 tcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagca 8443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 10331175 - 10331220
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||    
T  10331175 ttcaatcaataatttgaacgtcaacggtgtagatccagaagcatga 10331220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 25238534 - 25238497
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatg 129  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  25238534 ttttatcatattatttatagacattttgccgttgtatg 25238497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 35812756 - 35812852
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgtt 124  Q
    |||||| |||||||||  ||| ||||||| |||| || |  |||||  |||||||||||||    ||||||||||||||||||||| |||||||||||    
T  35812756 ttcaattaatgatttggacgttaacgttgaagatacaaagacatgagtatttcagtgactttaa-ttttatcatattatttgtagatattttgtcgtt 35812852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 36948461 - 36948428
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgattt 41  Q
    |||||||||||||||||| |||||||||||||||    
T  36948461 gacatcagtcaattacaaattcaatcaatgattt 36948428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 4809058 - 4809094
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  4809058 gttcaatcaaggatttgggcgtcaacgttgcagatcc 4809094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 8094955 - 8094913
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  8094955 ttttatcatattatttgtag-cattttgtcgtt-tatgctattaa 8094913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 8826359 - 8826403
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||| |||||| |||||| |||||| ||||||||||    
T  8826359 ttttatcatattacttgtaggcattttatcgttgcatgctattaa 8826403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 11464265 - 11464301
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  11464265 gttcaatcaaagatttgggcgtcaacgttgcagatcc 11464301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 43890114 - 43890078
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  43890114 gttcaatcaaagatttgggcgtcaacgttgcagatcc 43890078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 33053193 - 33053067
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||   |||||||||||||| | |||||||||||||||||    
T  33053193 acatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaag-ttttatcatattatttg 33053095  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  33053094 taggcattttgccgttgtatgctattaa 33053067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 23128683 - 23128812
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||| |||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  23128683 acatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttg 23128781  T
Q  109 tagacattttgtcgttgtatgctattaattt 139  Q
    ||| ||||||| |||||||||||||||||||    
T  23128782 taggcattttgccgttgtatgctattaattt 23128812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 127728 - 127850
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||| | |||||||||  ||||| |||| ||| | |||||||||||    
T  127728 agatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgattta-gattttatcatat 127826  T
Q  103 tatttgtagacattttgtcgttgt 126  Q
    ||||||||| ||||||| ||||||    
T  127827 tatttgtaggcattttgccgttgt 127850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 3913599 - 3913473
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| |||||||||   |||||||||||||||||||||||||||   ||||| |||| ||||| |||||||||||||||||    
T  3913599 acatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttagg-ttttatcatattatttg 3913501  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| | ||||||||||||||    
T  3913500 taggcattttgccattgtatgctattaa 3913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 30894659 - 30894787
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||   |||||  ||| ||||| |||||||||||    
T  30894659 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttacagatccagaagcatg-gtatttcgatgaattagg-ttttatcatat 30894756  T
Q  103 tatttgtagacattttgtcgttgtatgctat 133  Q
    ||||||||| |||||||  ||||||||||||    
T  30894757 tatttgtagtcattttgctgttgtatgctat 30894787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 34018627 - 34018733
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||||| |||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||  |||||||||||||| | |||||||||||||||||||    
T  34018627 atcagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatg-ttttatcatattatttgta 34018725  T
Q  111 gacatttt 118  Q
    | ||||||    
T  34018726 ggcatttt 34018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 29255470 - 29255345
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||| ||| ||||   ||||| |||||||| | ||||||||||||||||||    
T  29255470 catcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgactta-gattttatcatattatttgt 29255372  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || |||||    |||||||||||||||    
T  29255371 aggcatttcactgttgtatgctattaa 29255345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 14801895 - 14802018
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||| |||   ||||  |||| ||| | ||| ||||||||||||||||    
T  14801895 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgattta-gatttcatcatattatttgtag 14801993  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  14801994 gcattttgccgttgtatgctattaa 14802018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 606269 - 606395
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||||||| || ||||| ||||||||||  | |||||||||||||||| ||| ||||   ||||| |||||||| | |||||||||||||||||    
T  606269 acatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaag-ttttatcatattatttg 606367  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| | ||||||||||||||    
T  606368 taggcattttgccattgtatgctattaa 606395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 12170533 - 12170659
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||   ||||||||||||||||| ||||||||   ||||| |||| ||||| ||| |||||||||||||    
T  12170533 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccggaagcatgggtatttcggtgatttagg-tttgatcatattatttg 12170631  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||||||  |||||||||||||||    
T  12170632 taggcattttgctgttgtatgctattaa 12170659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 30608546 - 30608401
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||| |||||||||||| ||||| |||||||||| | ||||||||||||||||  ||| ||||   ||||| ||||||||   |||||||||||    
T  30608546 agatcgacataagtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgactta-tattttatcatat 30608448  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| ||||||  |||||||||||||||| || ||| |||||    
T  30608447 tatttgtaggcattttaccgttgtatgctattaacttggatgttgtg 30608401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 1523491 - 1523599
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||| |||||||||||||||||||||||||||   |||   |||| ||| | |||||||||||||||||||| ||||||||||| |     
T  1523491 ttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggtattctggtgattta-gattttatcatattatttgtaggcattttgtcgtgga 1523589  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  1523590 atgctattaa 1523599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 29319903 - 29319776
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatatta-ttt 107  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| ||||||||   ||||  |||||||| | ||||||||||||| |||    
T  29319903 acatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaag-ttttatcatattatttt 29319805  T
Q  108 gtagacattttgtcgttgtatgctattaa 136  Q
    |||  ||||||  ||||||||||||||||    
T  29319804 gtaagcattttaccgttgtatgctattaa 29319776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 68026 - 67900
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||| ||||||  ||| |||||||||||||| ||| ||||   ||||| | |||||| | ||||||||||||||||     
T  68026 acatcagtcaattacaaattcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaag-ttttatcatattattta 67928  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  67927 taggcattttgccgttgtatgctattaa 67900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 3355181 - 3355291
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    ||||||||||||||| || |||||| |||||||||  ||||||| |||||||||| |||||||||  |||||||||||||| | ||||||| |||| |||    
T  3355181 gacatcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgactta-gattttatcctattgttt 3355279  T
Q  108 gtagacattttg 119  Q
    | ||||||||||    
T  3355280 ggagacattttg 3355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 7515227 - 7515101
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| |||||||||  |||||||||||||| |||| ||||||||   || || |||||||||| |||||||||||||||||    
T  7515227 acatcactcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttagg-ttttatcatattatttg 7515129  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||   | |||||||||||||    
T  7515128 taggcatttttctgctgtatgctattaa 7515101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 546114 - 546222
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||   |||   |||  ||| | ||| |||||||||||||||| ||||||| ||||||    
T  546114 ttcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggttta-gatttcatcatattatttgtaggcattttgccgttgt 546212  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  546213 atgctattaa 546222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 20225927 - 20226055
Alignment:
Q  20 ttacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttg 119  Q
    |||||| |||||||||||||||  ||| | ||||||||||| | |||||||||  |||||  ||| ||| |  ||||||||||||||||||| |||||||    
T  20225927 ttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagtta-gaatttatcatattatttgtaggcattttg 20226025  T
Q  120 tcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||||||||||| || | |||||||    
T  20226026 tcgttgtatgctattaacttgggtattgtg 20226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 22119911 - 22120039
Alignment:
Q  20 ttacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttg 119  Q
    |||||| |||||||||||||||  ||| | ||||||||||| | |||||||||  |||||  ||| ||| |  ||||||||||||||||||| |||||||    
T  22119911 ttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagtta-gaatttatcatattatttgtaggcattttg 22120009  T
Q  120 tcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||||||||||| || | |||||||    
T  22120010 tcgttgtatgctattaacttgggtattgtg 22120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 31852197 - 31852091
Alignment:
Q  30 aatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatg 129  Q
    |||||||||||||| |||||| ||||||||||| |||||||||  |||   |||| |||   |||||||||||||||| |||||||||||| ||||||||    
T  31852197 aatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaa-ttttatcatattatttatagacattttgttgttgtatg 31852099  T
Q  130 ctattaat 137  Q
    ||||||||    
T  31852098 ctattaat 31852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 528372 - 528248
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||| |||||||  || ||||||| ||||| ||||||||||||||||| | |||| || |  |||  ||||| ||||  ||||||||||||||||||||    
T  528372 tcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttaga-ttttatcatattatttgtag 528274  T
Q  112 acattttgtcgttgtatgctattaat 137  Q
      ||||||||||||||||||||||||    
T  528273 gtattttgtcgttgtatgctattaat 528248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 9380093 - 9380213
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    ||||||| ||| ||||||||||||||||| | ||||| |||| |||| ||||||||||   ||||  |||| ||||  |||||||||||||||||||  |    
T  9380093 agtcaatcacatgttcaatcaatgatttgtgtgtcaatgttgtagattcagaagcatgggtattttggtgatttaga-ttttatcatattatttgtatgc 9380191  T
Q  114 attttgtcgttgtatgctatta 135  Q
    ||||||||||||||| ||||||    
T  9380192 attttgtcgttgtattctatta 9380213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 8102794 - 8102917
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||| ||||||||||| ||||||||||||||||||||||| |||||| |||    ||| ||| | ||||||||||||||||||||    
T  8102794 tcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgattta-gattttatcatattatttgtag 8102892  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||| | ||| ||||||    
T  8102893 gcattttgccgtggaatgttattaa 8102917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 31296921 - 31297014
Alignment:
Q  45 cgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    |||||||||||||||||| |||||||||  |||   |||| |||   |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  31296921 cgtcaacgttgcagatccggaagcatgagtattctggtgatttata-ttttatcatattgtttgtaggcattttgtcgttgtatgctattaattt 31297014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 32327242 - 32327133
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| |||||||||   ||| |||||||||||||| |||||||||  | ||  |||| ||||| |||||||||||||||||    
T  32327242 acatcaatcaattacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttagg-ttttatcatattatttg 32327144  T
Q  109 tagacattttg 119  Q
    ||| |||||||    
T  32327143 taggcattttg 32327133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 1704139 - 1704031
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||| |||||||||| | ||||||||| |||||| || ||||||| ||| |||| ||||    || ||||||||||||| ||||||||||||||||||    
T  1704139 ttcaataaatgatttgaacatcaacgttgtagatccggatgcatgaatattccagtcactttaa-ttgtatcatattatttatagacattttgtcgttgt 1704041  T
Q  127 atgctattaa 136  Q
    | ||||||||    
T  1704040 acgctattaa 1704031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 24227754 - 24227678
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgactta 88  Q
    |||||||||||||| ||||||||||||||||| | |||||||| ||||||| |||||||  | |||| |||||||||    
T  24227754 tcagtcaattacaatttcaatcaatgatttgaacctcaacgttccagatcctgaagcatacatattttagtgactta 24227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 26588494 - 26588371
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||||| |||||||||   |||||||||||| ||||||||||||||  ||||  |||| || |  |||||||||||||||| |||    
T  26588494 tcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttga-ttttatcatattatttttag 26588396  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
    ||||||||  |||||||||| ||||    
T  26588395 acattttgctgttgtatgctcttaa 26588371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 13546643 - 13546596
Alignment:
Q  93 tttatcatattatttgtagacattttgtcgttgtatgctattaattta 140  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  13546643 tttatcatattatttgtaggtattttgtcgttgtatgctattaattta 13546596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 4010535 - 4010430
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||  |||||||||||||||| | ||  ||||||||||||| |||||||||  ||||| |||||||| |  ||||||||||||||| ||    
T  4010535 atcaatcaattacatattcaatcaatgatttgggtgttgacgttgcagatccggaagcatgagtatttcggtgactta-gaatttatcatattatttata 4010437  T
Q  111 gacattt 117  Q
    | |||||    
T  4010436 ggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 30493615 - 30493723
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  ||||||||||||| |||| ||||||||   ||||  |||| |||   ||||||||| || ||||||| ||||||| ||||||    
T  30493615 ttcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgattta-tattttatcatgttgtttgtaggcattttgccgttgt 30493713  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  30493714 atgctattaa 30493723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 9341594 - 9341550
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  9341594 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaa 9341550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 30776731 - 30776854
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||| ||||||||||| |||| ||||||||| ||| |||||||||   |||   |||| ||||  ||||||||||||||||||||    
T  30776731 tcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttaga-ttttatcatattatttgtag 30776829  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||| | ||||||||||    
T  30776830 gcattttgccgtggaatgctattaa 30776854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 679177 - 679304
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||||||||||||||||||| |||| ||||| |||  |||||||||| |||     || ||| | ||||||||||||||| | |     
T  679177 tcagtcaatcacatattcaatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgacgattta-gattttatcatattattcgcaa 679275  T
Q  112 acattttgtcgttgtatgctattaatttag 141  Q
    |||||||| |||||||||||||||| ||||    
T  679276 acattttg-cgttgtatgctattaacttag 679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 21426622 - 21426585
Alignment:
Q  99 atattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaa 21426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 14846191 - 14846120
Alignment:
Q  64 gaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||  |||||  |||||||||| |||||||||||||||||||| |||||||  ||| |||||||||||    
T  14846191 gaagcatgtgaattttggtgacttagg-ttttatcatattatttgtaggcattttgctgttttatgctattaa 14846120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 25064323 - 25064359
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25064323 gttcaatcaaagatttgagcgtcaacgttgcagatcc 25064359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 14175047 - 14174970
Alignment:
Q  58 gatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||||  |||||| |||||||| | |||||||||||||||||||| ||||||  |||| |||||| ||||    
T  14175047 gatccggaagcatgtgaatttcggtgacttatg-ttttatcatattatttgtaggcatttttccgttttatgctgttaa 14174970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 14179583 - 14179506
Alignment:
Q  58 gatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||||  |||||| |||||||| | |||||||||||||||||||| ||||||  |||| |||||| ||||    
T  14179583 gatccggaagcatgtgaatttcggtgacttatg-ttttatcatattatttgtaggcatttttccgttttatgctgttaa 14179506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1933699 - 1933654
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    ||||||||||||||||  |||||||||||||||||| ||| |||||    
T  1933699 ttcaatcaatgatttggacgtcaacgttgcagatccggaaacatga 1933654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 32059969 - 32060026
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||| ||||||  |||| ||||||||||| ||||||||||| |||||| ||||||||    
T  32059969 agtcagttacaaaatcaaccaatgatttgatcgtcaacgttgaagatccggaagcatg 32060026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 4088547 - 4088583
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  4088547 gttcaatcaaagatttgggcgtcaacgttgcagatcc 4088583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 7876034 - 7875998
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7876034 gttcaatcaaagatttgggcgtcaacgttgcagatcc 7875998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 7881092 - 7881056
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7881092 gttcaatcaaagatttgggcgtcaacgttgcagatcc 7881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 28635110 - 28635066
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||    
T  28635110 ttcaatcaaagatttgagcgtcaatgttgcagatccggaggcatg 28635066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 32802693 - 32802737
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||    
T  32802693 ttttatcatattatttgtaggtattttatcgttgtatgatattaa 32802737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 37837489 - 37837357
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||  |||||| |||||||||| |||||||||||    
T  37837489 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttagg-ttttatcatat 37837391  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    || |||||| ||||||| |||| |||||||||||    
T  37837390 tacttgtaggcattttgccgttttatgctattaa 37837357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 13796960 - 13796815
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||| ||||  |||| ||||||||||| |||||||||||||||||| |||||||||  ||||  |||||||| | |||||||||||    
T  13796960 agatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaag-ttttatcatat 13796862  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| |||||||||||||||||||||||| || ||| |||||    
T  13796861 tatttgtaggcattttgtcgttgtatgctattaacttggatgttgtg 13796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 9450162 - 9450031
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   |||| ||||| ||||| |||||||||||||||||    
T  9450162 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttagg-ttttatcatattatttg 9450064  T
Q  109 tagacattttgtcgttgtatgctattaatttag 141  Q
    ||| ||||||| |||||||||||||||||||||    
T  9450063 taggcattttgccgttgtatgctattaatttag 9450031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 39171615 - 39171489
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||    
T  39171615 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttg 39171517  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  39171516 taggcattttgccgttgtatgctattaa 39171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 48061488 - 48061614
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||  ||||||||  ||||| |||| ||||| |||||||||||||||||    
T  48061488 acattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttagg-ttttatcatattatttg 48061586  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  48061587 taggcattttgccgttgtatgctattaa 48061614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 19404788 - 19404656
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||  |||||||||||||| | |||||||||||    
T  19404788 agattgacatctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgactta-gattttatcatat 19404690  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| | ||||| ||||| | ||||||||    
T  19404689 tatttgtaggctttttgccgttgcacgctattaa 19404656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 42978670 - 42978802
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||| |||| |||   ||||| |||||||||| |||||||||||    
T  42978670 agatcgacatcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttagg-ttttatcatat 42978768  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||| ||||||| ||||||||||||||||    
T  42978769 tatatgtaggcattttgccgttgtatgctattaa 42978802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 12141333 - 12141207
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  12141333 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgactta-gattttatcatattatttg 12141235  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||| ||||||||||||||||    
T  12141234 tatgcattttgccgttgtatgctattaa 12141207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 47590377 - 47590503
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||| ||||||||||| ||||| |||||||||| |||||||||||||| |||| |||||||||  ||||| | |||||||| |||||||||||||||||    
T  47590377 acatccgtcaattacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttagg-ttttatcatattatttg 47590475  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||| ||||||||    
T  47590476 taggcattttgccgttgtaagctattaa 47590503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 24770313 - 24770438
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||||||||| |||| ||||| |||||||||| |||||||||||| |||||||||||||||  |||||| | |||||||| ||||||||||||||| ||    
T  24770313 catcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttagg-ttttatcatattattggt 24770411  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    |||||||||| |||| |||| ||||||    
T  24770412 agacattttgccgttttatgttattaa 24770438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 46700100 - 46700227
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    |||||||||||| ||||| |||||||||||||||| || ||| |||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||    
T  46700100 gacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgactta-gattttatcatattattt 46700198  T
Q  108 gtagacattttgtcgttgtatgctattaa 136  Q
     ||| ||||||| |||| |||||||||||    
T  46700199 ataggcattttgccgttatatgctattaa 46700227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 8001571 - 8001445
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||| | ||| |||||  ||||| |||||||||| ||||||||||||||||     
T  8001571 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttagg-ttttatcatattattta 8001473  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  8001472 taggcattttgccgttgtatgctattaa 8001445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 22743013 - 22743139
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||   |||| ||| | ||| |||||||||||||| |    
T  22743013 tcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtgattta-gatttcatcatattatttgttg 22743111  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
     ||||||| |||||||||||||||||||    
T  22743112 gcattttgccgttgtatgctattaattt 22743139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 38798848 - 38798986
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||| |||||| ||||||||  |||||| |||||||| | ||||||||||||||||||    
T  38798848 catcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgactta-gattttatcatattatttgt 38798946  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || ||||||| |||  ||||||||||| || ||| |||||    
T  38798947 aggcattttgccgtcttatgctattaacttggatgttgtg 38798986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 48316837 - 48316711
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||| ||||||||| ||||||||   ||||| | || ||||| |||||||||||||||||    
T  48316837 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttagg-ttttatcatattatttg 48316739  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  48316738 taggcattttgtcgttgtatgctattaa 48316711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 19296936 - 19297065
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| || ||||| | |||||||||||||||||    
T  19296936 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaag-ttttatcatattatttg 19297034  T
Q  109 tagacattttgtcgttgtatgctattaattt 139  Q
    ||| |||||||  ||| ||||||||||||||    
T  19297035 taggcattttgctgttatatgctattaattt 19297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 45349823 - 45349698
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||  |||||||| |||||||||  ||||||||  |||||| |||| ||||| ||||||||||||||||||    
T  45349823 catcagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttagg-ttttatcatattatttgt 45349725  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| |||| |||||||||||    
T  45349724 aggcattttgccgttttatgctattaa 45349698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 25287217 - 25287085
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||||  || ||||||   ||||||| | ||||| |||||||| | |||||||||||    
T  25287217 agattgacatcaatcaattacaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgactta-gattttatcatat 25287119  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| |||||||  |||||||||||||||    
T  25287118 tatttgtagccattttgctgttgtatgctattaa 25287085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 30756844 - 30756713
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||| |||||  | |||||||||||||||| |||||||||  ||||| |||||||| | ||||||||||||||||     
T  30756844 acatcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaag-ttttatcatattattta 30756746  T
Q  109 tagacattttgtcgttgtatgctattaatttag 141  Q
    ||| |||||||||||| |||||| |||| ||||    
T  30756745 taggcattttgtcgttttatgctgttaacttag 30756713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 34899632 - 34899493
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||||| || | ||||||||   ||||| |||||||| | |||||||||||||||||    
T  34899632 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaag-ttttatcatattatttg 34899534  T
Q  109 tagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||  ||||||| |||||||||||||||| || ||| |||||    
T  34899533 tatgcattttgccgttgtatgctattaacttggatgttgtg 34899493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 28044779 - 28044655
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| ||||||| || ||||| || |||||||| |||||||||||||||||| ||| ||||   ||||| |||| ||||| |||||||||||||||| ||    
T  28044779 atcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaacatgggtatttcggtgatttagg-ttttatcatattattttta 28044681  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||||||||||    
T  28044680 gacattttgccgttgtatgctattaa 28044655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 24069412 - 24069293
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||| || |||||||||  |||   |||| ||||  |||||||||||||||||||| |||    
T  24069412 tcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttaga-ttttatcatattatttgtaggcat 24069314  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    ||| |||||||||||||||||    
T  24069313 tttatcgttgtatgctattaa 24069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 35133016 - 35133139
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||||||||||||||||||| ||||||||  |||  ||||| ||| | ||| |||||||||||| |||    
T  35133016 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattctagtgattta-gatttcatcatattatttctag 35133114  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  35133115 gcattttgccgttgtatgctattaa 35133139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 39328814 - 39328692
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||  |||||||  ||| || |||||||||| ||||||||   |||||||    
T  39328814 catcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttagg-ttttatca---tatttgt 39328719  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| |||| |||||||||||    
T  39328718 aggcattttgccgttttatgctattaa 39328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 40993223 - 40993349
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| |||||  || ||||||    ||||||||||| || ||||||||||   ||||| |||||||| | |||||||||||||||||    
T  40993223 acatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgggtatttcggtgacttaag-ttttatcatattatttg 40993321  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||| ||||||    
T  40993322 taggcattttgtcgttgtatgttattaa 40993349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 35665142 - 35665034
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||| |||||| |||||||| ||| |||||||   |||| ||||| ||||  |||||||||||||||| | | ||||||||||||||    
T  35665142 ttcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttaga-ttttatcatattattttttggcattttgtcgttgt 35665044  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  35665043 atgctattaa 35665034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 5792856 - 5792959
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||  ||||||| | ||||||  |||||||   |||||||||||    
T  5792856 agatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgactta-tattttatcatat 5792954  T
Q  103 tattt 107  Q
    |||||    
T  5792955 tattt 5792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 25255311 - 25255432
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||||||||| ||||| || || | ||||||||||| ||||||||   |||| ||||||||||  ||| || |||| |||||||| ||||||||||||||    
T  25255311 ttcaatcaattatttgggcatcgatgttgcagatcctgaagcatgggcattttagtgacttagagttt-ataatatcatttgtaggcattttgtcgttgt 25255409  T
Q  127 atgctattaatttagatattgtg 149  Q
    |||||||||| |||||| |||||    
T  25255410 atgctattaacttagatgttgtg 25255432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 5000051 - 4999930
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||| |||||||||| |||||  | |||||||||| ||||  |||||||||| |||   |||| |||   |||||||||||||||| |||    
T  5000051 tcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatttaaa-ttttatcatattatttatag 4999953  T
Q  112 acattttgtcgttgtatgctatt 134  Q
    ||||||| |||||||||| ||||    
T  4999952 acattttttcgttgtatgttatt 4999930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 24350856 - 24350802
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  24350856 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatg 24350802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 9977237 - 9977096
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||| |||||||||||||| ||||| |||||||||| |||||||||||    |||| |||  |||   ||||   ||| ||| | |||||||||||    
T  9977237 agatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt----atccggaattatgtgtattttgatgagtta-gattttatcatat 9977143  T
Q  103 tatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||| |||||||||||||||||||||||||||| || ||| |||||    
T  9977142 tatttttagacattttgtcgttgtatgctattaacttggatgttgtg 9977096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 28407862 - 28407817
Alignment:
Q  91 cttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28407862 cttttatcatattatttgtagacattttgccgttgtatgctattaa 28407817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 5348610 - 5348491
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    |||||||||  |||||||||||||||| ||||| ||||||||||| |  ||  |||   |||||||||||||||  ||| | |||||||||||||| |||    
T  5348610 tcaattacagattcaatcaatgatttgggcgtcgacgttgcagattcgaaaatatgtgtatttcagtgacttagaattt-accatattatttgtaggcat 5348512  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||  ||||||||||||||||    
T  5348511 tttaccgttgtatgctattaa 5348491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 38880600 - 38880485
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcata-ttatttgta 110  Q
    ||||||||| |||| |||||||||||||||| | | ||||||||||||||  ||||||||   |||| ||| | ||| | |||||||||| |||| ||||    
T  38880600 tcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttattta-gattttatcatacttatctgta 38880502  T
Q  111 gacattttgtcgttgta 127  Q
    |||||||||||||||||    
T  38880501 gacattttgtcgttgta 38880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 28476296 - 28476401
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||| ||||||||||| |||||||||||||||||||||||| |||   | ||| |||| ||| | ||||||||||||||||||||    
T  28476296 tcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggta-ttcggtgattta-gattttatcatattatttgtag 28476393  T
Q  112 acattttg 119  Q
     |||||||    
T  28476394 gcattttg 28476401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 44311732 - 44311686
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatt 138  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  44311732 ttttatcatattatttgtagacatttcgttgttgtatgctattaatt 44311686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 39229083 - 39229218
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||  ||||| | |||| ||| ||||| ||||||||||||  ||||||||   ||||||| |||||| |  |||||||||| ||||||||    
T  39229083 tcagtcaattacagattcaaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggactta-gaatttatcatataatttgtag 39229181  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     ||||||  ||||||||||| ||||||| ||| |||||    
T  39229182 gcatttttccgttgtatgct-ttaatttggatgttgtg 39229218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 21266478 - 21266588
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaag-catgaaaatttcagtgacttaggcttttatcatat-tatttgtagacattttgtcgtt 124  Q
    ||||||||| ||||||||| |||||||||||||||| || | |||||| ||||| |||||||  | ||||||||||| | ||||||| |||| || ||||    
T  21266478 ttcaatcaaagatttgagcatcaacgttgcagatccggaggccatgaatatttcggtgactttag-ttttatcatatatttttgtaggcattatgccgtt 21266576  T
Q  125 gtatgctattaa 136  Q
     |||||||||||    
T  21266577 atatgctattaa 21266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 48930795 - 48930912
Alignment:
Q  31 atcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgc 130  Q
    |||||||||||| | ||||||||||||||||||||| |||    |||   |||| ||||  ||| |||||||||||||| | ||||||| ||||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttaga-tttcatcatattatttgttggcattttgccgttgtatgc 48930893  T
Q  131 tattaatttagatattgtg 149  Q
    |||||| || | |||||||    
T  48930894 tattaacttgggtattgtg 48930912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 46822685 - 46822629
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| || ||| |||||    
T  46822685 ttttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtg 46822629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 49148070 - 49148014
Alignment:
Q  79 cagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| || ||||||||||||| |||| | ||||||||||||||||||||||||    
T  49148070 cagtgactt-ggattttatcatattaattgttggcattttgtcgttgtatgctattaa 49148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 1769200 - 1769140
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    ||||||||| |||  ||||||||||||||||| ||| |||||||||||||  |||||||||    
T  1769200 tcagtcaatcacagattcaatcaatgatttgaacgtgaacgttgcagatctggaagcatga 1769140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 13592497 - 13592453
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  13592497 ttcaatcaaagatttgagcgtcaacgttgcagatccggatgcatg 13592453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 29617642 - 29617598
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||    
T  29617642 ttttatcatattatttgtagacattttgttgttgagtgctattaa 29617598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 46244195 - 46244151
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  46244195 ttttatcatattatttgtaggcattttgtcattgtatgttattaa 46244151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 6002109 - 6002144
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6002109 ttcaatcaaagatttgagcgtcaacgttgcagatcc 6002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 11343879 - 11343929
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||||||| || ||| |||||||||  ||||||||||||||||||    
T  11343879 tcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatcc 11343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 14627868 - 14627835
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagat 60  Q
    ||||||||| ||||||||||||||||||||||||    
T  14627868 ttcaatcaaagatttgagcgtcaacgttgcagat 14627835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 38051009 - 38050952
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    |||||||||||||| |||||||||||| | ||||||| ||||| |||| ||| |||||    
T  38051009 ttttatcatattatatgtagacattttattgttgtattctattgatttggatgttgtg 38050952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 42067051 - 42067010
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagc 68  Q
    ||||||||| |||||| ||||||||||||||||||| |||||    
T  42067051 ttcaatcaaagatttgggcgtcaacgttgcagatccggaagc 42067010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 2843231 - 2843195
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||||||||||| |||||||||||    
T  2843231 gttcaatcaaagatttgagcgtcaatgttgcagatcc 2843195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 5078436 - 5078376
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    ||||||||| ||||||||||| |||||||||  ||||||| ||||| ||||  ||||||||    
T  5078436 tcagtcaatcacaagttcaataaatgatttggacgtcaactttgcatatccgaaagcatga 5078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 27341698 - 27341742
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||| ||||||||||||| ||||||| |||| |||||||||||    
T  27341698 ttttataatattatttgtaggcattttgccgttatatgctattaa 27341742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 34773798 - 34773834
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  34773798 gttcaatcaaagatttgggcgtcaacgttgcagatcc 34773834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 41553456 - 41553333
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  |||| | |||||||||  |||||||||||||||||| ||| |||  | ||||  |||| ||| | ||||||||||| |||| ||     
T  41553456 tcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgattta-gattttatcatatcatttatac 41553358  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
      |||||| ||||||||||||||||    
T  41553357 gtattttgccgttgtatgctattaa 41553333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 43369697 - 43369653
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||||    
T  43369697 ttttatcatattatttataggcattttgccgttgtatgatattaa 43369653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 46822102 - 46822138
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  46822102 gttcaatcaaagatttgggcgtcaacgttgcagatcc 46822138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 46822760 - 46822712
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagat 60  Q
    ||||||||| ||| ||||||||||||||||   ||||||||||||||||    
T  46822760 tcagtcaatcacatgttcaatcaatgatttagacgtcaacgttgcagat 46822712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 66073 - 65941
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| | | ||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||    
T  66073 agatcgacatcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatg-ttttatcatat 65975  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||||||||||||||||||    
T  65974 tatttgtaggcattttgtcgttgtatgctattaa 65941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 15556 - 15682
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||| |||||||||| |||||||| | ||||| |||||||||| |||||||||||||||||    
T  15556 acatcagtcaattacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttagg-ttttatcatattatttg 15654  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| |||| |||||||||||    
T  15655 taggcattttgccgttatatgctattaa 15682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 33579937 - 33580069
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| |||||||||||| |||||| |||||| |  |||||| |||| ||||| |||||||||||    
T  33579937 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttagg-ttttatcatat 33580035  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| |||| |||||||||||    
T  33580036 tatttgtaggcattttgccgttttatgctattaa 33580069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 7448939 - 7448808
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||||| |||| |||||||||  ||||| |||||||| | ||| |||||||||||||    
T  7448939 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaag-tttcatcatattatttg 7448841  T
Q  109 tagacattttgtcgttgtatgctattaatttag 141  Q
    ||||||||||| || ||||||||||||| ||||    
T  7448840 tagacattttgccgctgtatgctattaacttag 7448808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 7457081 - 7456950
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||||| |||| |||||||||  ||||| |||||||| | ||| |||||||||||||    
T  7457081 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaag-tttcatcatattatttg 7456983  T
Q  109 tagacattttgtcgttgtatgctattaatttag 141  Q
    ||||||||||| || ||||||||||||| ||||    
T  7456982 tagacattttgccgctgtatgctattaacttag 7456950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 19619784 - 19619902
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    ||||||||||||||||||||||||||  | |||||||||| |||||| ||||||||| |||||| |||||||||  |||||||||||||||||||| |||    
T  19619784 tcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatcc-gaagcatgagaatttcggtgacttaga-ttttatcatattatttgtaggcat 19619881  T
Q  116 tttgtcgttgtatgctattaa 136  Q
    |||| ||||||||||||||||    
T  19619882 tttgccgttgtatgctattaa 19619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 9797559 - 9797433
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||| ||| |||||||||||||| ||||||||   |||| ||||| ||| | |||||||||||||||||    
T  9797559 acatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatg-ttttatcatattatttg 9797461  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  9797460 taggcattttgtcgttgtatgctattaa 9797433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 10108299 - 10108425
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||| ||  ||||||||||||||||| ||||||  ||||| | |||||| | |||||||||||||||||    
T  10108299 acatcagtcaattacaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaag-ttttatcatattatttg 10108397  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  10108398 taggcattttgccgttgtatgctattaa 10108425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 10229539 - 10229665
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||  ||||||||||||||| ||||||||  ||||| |||||||| | |||||||||||||||||    
T  10229539 acatcagtcaattacaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaag-ttttatcatattatttg 10229637  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  10229638 taggcattttgccgttgtatgctattaa 10229665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 21533834 - 21533708
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||| | ||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||||||||    
T  21533834 acatcagtcgactacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatttg 21533736  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  21533735 taggcattttgccgttgtatgctattaa 21533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 53099858 - 53099978
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||  |||| |||||||||| | ||||| |||||||||||||| |    
T  53099858 agtcaattacaagttcaatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgactta-gattttagcatattatttgtag-c 53099955  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| ||||||    
T  53099956 attttgtcgttgtatgttattaa 53099978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 38545856 - 38545988
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||  || ||||  |||||  |||||||||| |||||||||||    
T  38545856 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttagg-ttttatcatat 38545954  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||| |||| |||||||||||    
T  38545955 tatttgtaggcattttgccgttttatgctattaa 38545988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 23799936 - 23799809
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||||||||||||  || |||||  |||||| ||||||| | ||||||||||||||||    
T  23799936 gacaccagtcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgactta-gattttatcatattattt 23799838  T
Q  108 gtagacattttgtcgttgtatgctattaa 136  Q
    |||| ||||||| ||||||||| ||||||    
T  23799837 gtaggcattttgccgttgtatgttattaa 23799809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 9998530 - 9998656
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||   ||||||||||||||||||||||   ||||| |||||||| | |||||||||||||||||    
T  9998530 acatcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaag-ttttatcatattatttg 9998628  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  9998629 taggcattttgccgttgtatgctattaa 9998656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 10233133 - 10233259
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||||   ||  |||||||||||||||||| |||||  ||||| |||||||| | |||||||||||||||||    
T  10233133 acatcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaag-ttttatcatattatttg 10233231  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  10233232 taggcattttgccgttgtatgctattaa 10233259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 12050673 - 12050547
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||| ||||||||||| ||||| |||||||||| | ||||||||||||||||| ||| |||||  ||||| | |||||||| |||||||||||||||||    
T  12050673 acatcggtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttagg-ttttatcatattatttg 12050575  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||  ||||||||||||||||| ||||||    
T  12050574 taagcattttgtcgttgtatgttattaa 12050547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 20608924 - 20608798
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||| |||| ||| | |||||| |||||| |||    
T  20608924 acattagtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgattta-gattttattatattacttg 20608826  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
     |||||||||  ||||||||||||||||    
T  20608825 cagacatttttccgttgtatgctattaa 20608798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 21431676 - 21431802
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||| ||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||    
T  21431676 acatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttg 21431774  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||| ||||||    
T  21431775 taggcattttgccgttgtatgatattaa 21431802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 43488608 - 43488486
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    ||||||| || ||||| ||||||||||| |||||||||||||||||| |||||||||  ||||| |||| ||||| |||||||||||||||| ||| | |    
T  43488608 tcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttagg-ttttatcatattatttttaggctt 43488510  T
Q  116 tttgtcgttgtatgctattaattt 139  Q
    |||| |||||||||||||||||||    
T  43488509 tttgccgttgtatgctattaattt 43488486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 45568470 - 45568344
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  ||||||| |||||||||| |||||||| | ||||  |||| ||||| |||||||||||||||||    
T  45568470 acatcaatcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttagg-ttttatcatattatttg 45568372  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  45568371 taggcattttgccgttgtatgctattaa 45568344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 46304545 - 46304419
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||||  |||||||| |||||||||| ||||||||   ||||| |||||||||| |||||||||||||| ||    
T  46304545 acatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtatttcggtgacttagg-ttttatcatattatatg 46304447  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||| ||| ||||||||||||||||    
T  46304446 taggcatgttgccgttgtatgctattaa 46304419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 47896215 - 47896340
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| |||||||||| |||| || |||||| |||| |||||||||| |||||  | ||||||| ||||||| |||||||||    
T  47896215 acatcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttagg-ttttatcttattatttg 47896313  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||||||||||    
T  47896314 tag-cattttgtcgttgtatgctattaa 47896340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 42460825 - 42460938
Alignment:
Q  22 acaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtc 121  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||| |||   |||| ||| | |||||||||||||||||||| ||||||||     
T  42460825 acaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgattta-gattttatcatattatttgtaggcattttgtt 42460923  T
Q  122 gttgtatgctattaa 136  Q
    |||||||||||||||    
T  42460924 gttgtatgctattaa 42460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 52923137 - 52923016
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||||| |    
T  52923137 agtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtaggc 52923039  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||  ||||||||||||||||    
T  52923038 attttaccgttgtatgctattaa 52923016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 6954721 - 6954595
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  |||||| | ||||||||| ||||||||   ||||| |||||||| | |||||||| ||||||||    
T  6954721 acatcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatg-ttttatcaaattatttg 6954623  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  6954622 taggcattttgccgttgtatgctattaa 6954595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 54149078 - 54149180
Alignment:
Q  33 caatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgcta 132  Q
    |||||||||| ||||||||||||||||||| ||||||||   ||||| ||||||| || |||||||||||||||||||| |||| |||||||||||||||    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgactt-ggattttatcatattatttgtaggcattatgtcgttgtatgcta 54149176  T
Q  133 ttaa 136  Q
    ||||    
T  54149177 ttaa 54149180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 19339244 - 19339364
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| |||||||||||||||  | ||||| ||||||||||||||||||||   ||||| |||||||| | |||||||||||||| ||||| |    
T  19339244 agtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttc-gtgactta-gattttatcatattatctgtaggc 19339341  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| ||||||    
T  19339342 attttgtcgttgtatgttattaa 19339364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 18011088 - 18011212
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    ||||||| |||| |||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||| | | | ||||||||||||||||      
T  18011088 agtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatttcagtgactta-gatataatcatattatttgtaggt 18011186  T
Q  114 attttgtcgttgtatgctattaattt 139  Q
    || |||  ||||||||||| ||||||    
T  18011187 atcttgcggttgtatgctactaattt 18011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 21313101 - 21313225
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| ||| |||   || |||||  ||||| |||||||||  |||||||||||||||||||    
T  21313101 atcagtcaattacaaattcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttaga-ttttatcatattatttgta 21313199  T
Q  111 gacattttgtcgttgtatgctattaa 136  Q
    | ||||||| ||||||||||||||||    
T  21313200 gccattttgccgttgtatgctattaa 21313225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 40556765 - 40556888
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||||||| | |||| ||||||||   ||||  |||||||| | |||||||||||||||||    
T  40556765 acatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaag-ttttatcatattatttg 40556863  T
Q  109 tagacattttgtcgttgtatgctat 133  Q
    ||| ||||||| |||||||||||||    
T  40556864 taggcattttgccgttgtatgctat 40556888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 47042072 - 47041942
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||||||| |||||| ||||| ||||| |||| |||||||||||| |||||| ||||||||  |||||  |||||||||| ||| ||||||||||||||    
T  47042072 catcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttagg-tttcatcatattatttgt 47041974  T
Q  110 agacattttgtcgttgtatgctattaatttag 141  Q
    || | |||| ||||| ||||||||||| ||||    
T  47041973 aggcgttttatcgttttatgctattaacttag 47041942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 51303660 - 51303542
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||   |||   |||| ||| | ||| |||||||||||||||| ||||    
T  51303660 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgattta-gatttcatcatattatttgtaggcatt 51303562  T
Q  117 ttgtcgttgtatgctattaa 136  Q
    ||| ||||||||||||||||    
T  51303561 ttgccgttgtatgctattaa 51303542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 48650758 - 48650633
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||| |||||||||| ||||| |||| |||||  |||||||||||||||||   ||| ||||  ||||| |||||||| | ||||||||||||||||||    
T  48650758 catcaatcaattacaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaag-ttttatcatattatttgt 48650660  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || ||||||| ||||||||||||||||    
T  48650659 aggcattttgccgttgtatgctattaa 48650633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 8914778 - 8914901
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||| |||   |||   |||| ||| | ||| ||||||||||||||||    
T  8914778 tcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgattta-gatttcatcatattatttgtag 8914876  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  8914877 gcattttgccgttgtatgctattaa 8914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 32701562 - 32701677
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||| ||||||||   ||||| | |||||| | |||||| ||||||| ||||| ||||    
T  32701562 caattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagcatgggtatttcggcgacttaag-ttttatgatattatctgtaggcatt 32701660  T
Q  117 ttgtcgttgtatgctat 133  Q
    ||| |||||||||||||    
T  32701661 ttgccgttgtatgctat 32701677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 16235497 - 16235615
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| |||||||||||||||| |||||||||||||||||| |||||||||   |||   |||| ||| | ||| ||||||||| |||||| ||||    
T  16235497 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgattta-gatttcatcatattacttgtaggcatt 16235595  T
Q  117 ttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||    
T  16235596 ttgtcgttgtatgctattaa 16235615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 38860139 - 38860011
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga--aaatttcagtgacttaggcttttatcatattatt 106  Q
    ||||||||| ||||||| ||||| |||||| |||  ||||||||||||||||||  || ||||   | ||||  |||||||||| |||||||||||||||    
T  38860139 acatcagtcgattacaaattcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttagg-ttttatcatattatt 38860041  T
Q  107 tgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| ||||||| ||||||||||||||||    
T  38860040 tgtaggcattttgccgttgtatgctattaa 38860011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 4711583 - 4711671
Alignment:
Q  47 tcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| ||||||||   ||||| |||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||    
T  4711583 tcaacgttgcagatccggaagcatgggtatttcggtgacttaag-ttttatcatattatttgtaggcattttgccgttgtatgctattaa 4711671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 12149815 - 12149683
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||  |||||| ||||| |||||||||| ||||||||||||||||||  |||| |||   ||||| |||| ||| | |||||||||||    
T  12149815 agatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatg-ttttatcatat 12149717  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    || | |||| ||||||| ||||||||||||||||    
T  12149716 taatcgtaggcattttgccgttgtatgctattaa 12149683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 26275850 - 26275718
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||||||||  ||||| |||||||||||||||    || |||||||||||| |  || |||||  ||||||||||||||   |||||||||||    
T  26275850 agatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgcagattcgaaaacatgagtatttcagtgacttata-ttttatcatat 26275752  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||||| ||||||||| ||||||||||||||    
T  26275751 tatttgtaggcattttgtcattgtatgctattaa 26275718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 51923808 - 51923916
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||||   |||   |||| ||| | ||| |||||||||||||||| ||||||| ||||||    
T  51923808 ttcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgattta-gatttcatcatattatttgtaggcattttgccgttgt 51923906  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  51923907 atgctattaa 51923916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Original strand, 7546681 - 7546804
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||| ||||||||||||||||||||||||| |||||| |||||||   |||   |||| ||| | ||| ||||||||||||||||    
T  7546681 tcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgattta-gatttcatcatattatttgtag 7546779  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  7546780 gcattttgccgttgtatgctattaa 7546804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 20464992 - 20464869
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||||    ||||||||  ||||| ||||||||   ||||||||||||||||||      
T  20464992 tcagtcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgactta-aattttatcatattatttgtgt 20464894  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||||||| ||||||||||||    
T  20464893 gcattttgtcgtcgtatgctattaa 20464869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 53807880 - 53807757
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  ||||||||||||| ||||||||||| ||  |||   |||| ||||  || |||||||||||||||||    
T  53807880 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttaga-ttatatcatattatttgtag 53807782  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  53807781 gcattttgccgttgtatgctattaa 53807757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 36461456 - 36461346
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||| ||||||  |||||||||  ||||| | || ||||| |||||||||||||||||    
T  36461456 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttagg-ttttatcatattatttg 36461358  T
Q  109 tagacattttgt 120  Q
    ||| ||||||||    
T  36461357 tagccattttgt 36461346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 40487389 - 40487514
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||||||||| |||| ||||  ||||||||||  ||||||| |||||||||| |||||||    ||||| |||||||||| |||||||||||||||||    
T  40487389 acatcagtcaat-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttagg-ttttatcatattatttg 40487486  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| |||| |||| ||||||    
T  40487487 taggcattttgccgttatatgttattaa 40487514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 14859571 - 14859679
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||||   ||||  || | ||| | ||||||| ||||||| || | ||||||||||||||    
T  14859571 ttcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaattta-gattttatcgtattattggttggcattttgtcgttgt 14859669  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  14859670 atgctattaa 14859679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 29922138 - 29922246
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||   ||   |||| ||| | |||||||||||| ||||||| ||||||| ||||||    
T  29922138 ttcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgattta-gattttatcatattgtttgtaggcattttgccgttgt 29922236  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  29922237 atgctattaa 29922246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 29971291 - 29971399
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||   ||   |||| ||| | |||||||||||| ||||||| ||||||| ||||||    
T  29971291 ttcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgattta-gattttatcatattgtttgtaggcattttgccgttgt 29971389  T
Q  127 atgctattaa 136  Q
    ||||||||||    
T  29971390 atgctattaa 29971399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 45424860 - 45424968
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    |||||| ||||||||||| |||||||||||||||| |||||||| |||||||||| ||| ||||   | ||| |||||||  | ||||||||||||||||    
T  45424860 gacatcggtcaattacaaattcaatcaatgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgactt-cgattttatcatattattt 45424958  T
Q  108 gtagacattt 117  Q
    |||| |||||    
T  45424959 gtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 48199847 - 48199971
Alignment:
Q  16 tcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacat 115  Q
    ||||||| || || |||||||||||||  |||| |||||||| |||||||||||||   ||||| |||||||| |  ||||||||||||| ||||| |||    
T  48199847 tcaattataaatttaatcaatgatttggacgtcgacgttgcaaatccagaagcatgtgcatttcggtgactta-gaatttatcatattatctgtaggcat 48199945  T
Q  116 tttgtcgttgtatgctattaatttag 141  Q
    |||| | || ||||||||||||||||    
T  48199946 tttgcctttatatgctattaatttag 48199971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 21289836 - 21289713
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||  | |||||||||||||||| ||||||||| | |||   || | ||||  ||| ||||||||||||||||    
T  21289836 tcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttaga-tttcatcatattatttgtag 21289738  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| ||||||||||||||||    
T  21289737 gcattttgccgttgtatgctattaa 21289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 43016923 - 43017014
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatt 106  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||||| || |||||   ||||| |||||||||| | |||||||||||||    
T  43016923 agtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggatgcatgtgcatttcggtgacttagg-tgttatcatattatt 43017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 20987830 - 20987729
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||| ||||||||||||||  |||||||||||| | ||||||||| ||||||  ||||||| | ||||||||| ||||| | |||||||||||    
T  20987830 agatcgacatcggtcaattacaagttacatcaatgatttgggagtcaacgttacagatctggaagcataagaatttcagtaactta-gattttatcatat 20987732  T
Q  103 tat 105  Q
    |||    
T  20987731 tat 20987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 53508307 - 53508404
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttg 125  Q
    ||||||||||||||||  ||||||| ||||| ||||| ||||||||  ||| || ||| ||||  |||||||||||||||||||| |||||||||||||    
T  53508307 ttcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttaga-ttttatcatattatttgtaggcattttgtcgttg 53508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 628945 - 628822
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||  | ||||||||| ||||||||||||| ||  |||   |||| ||||  || |||||||||||||||||    
T  628945 tcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagcaagagtattctggtgatttaga-ttatatcatattatttgtag 628847  T
Q  112 acattttgtcgttgtatgctattaa 136  Q
     ||||||| |||||||| |||||||    
T  628846 gcattttgccgttgtattctattaa 628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 27706243 - 27706125
Alignment:
Q  17 caattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacatt 116  Q
    |||| |||| |||||||||||||||  |||||||||||||| ||||| |||||||   ||    || | ||||  ||| |||||||||||||||| ||||    
T  27706243 caatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttatttaga-tttcatcatattatttgtaggcatt 27706145  T
Q  117 ttgtcgttgtatgctattaa 136  Q
    ||||||||||||||||||||    
T  27706144 ttgtcgttgtatgctattaa 27706125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 45425657 - 45425762
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgta 110  Q
    |||| |||||||||| |||||||||||||||| || ||||| |||||||||| ||| ||| |  ||||| |||||||  | ||||||||||||||||| |    
T  45425657 atcaatcaattacaaattcaatcaatgatttgggcttcaacattgcagatccggaaccataagtatttcggtgactt-cgattttatcatattatttgca 45425755  T
Q  111 gacattt 117  Q
    | |||||    
T  45425756 ggcattt 45425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 20987725 - 20987654
Alignment:
Q  64 gaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||| |||||||  |||||||||||||||    
T  20987725 gaagcataagaatttcagttacttaga-ttttatcatattatttgtaggcattttgcagttgtatgctattaa 20987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 43017023 - 43017082
Alignment:
Q  81 gtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    |||||||||| | |||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  43017023 gtgacttagg-tgttatcatattatttgtaggcattttgccgttgtatgctattaacttag 43017082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 19862271 - 19862224
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  19862271 ttttatcatattatttagagacattttgtcgttatatgctattaattt 19862224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 27066020 - 27066078
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcat 70  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||| |||||| |||||||    
T  27066020 tcagttaattacaaattcaatcaattatttgagcgtcaacattgtagatccggaagcat 27066078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 35864963 - 35864894
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 72  Q
    |||| ||||||| |||||||||| ||||||||||||||||  ||| ||| |||||||||  |||||||||    
T  35864963 agatcgacatcaatcaattacaaattcaatcaatgatttggacgttaacattgcagatctggaagcatga 35864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 37040826 - 37040957
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||| |||||||| || | |||||||||||||| | || || ||||| |||| |||| |||||  ||||| |||||||| | ||| |||||||    
T  37040826 agattgacatcggtcaattataaatccaatcaatgatttgggtgtgaatgttgccgatctagaaacatgagtatttcggtgactta-gatttaatcatat 37040924  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    || |||||| ||||||||| || |||| ||||||    
T  37040925 tagttgtag-cattttgtcattttatgttattaa 37040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 42455759 - 42455706
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| |||||| |||||||||||||||||||||||| || ||| |||||    
T  42455759 atcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtg 42455706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 44959932 - 44959872
Alignment:
Q  75 atttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||| |||||||| | |||||||||||||||||||| ||||||| | ||||||||||||||    
T  44959932 atttcggtgacttaag-ttttatcatattatttgtaggcattttgccattgtatgctattaa 44959872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 50194357 - 50194221
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||| ||||||||  ||| |||||||||||||| |||||||||  |||   |||| ||| | | | |||||||| |||||||    
T  50194357 tcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtattctggtgattta-gatatcatcatattttttgtag 50194259  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
     ||||||| |||| ||||||||||| || ||| |||||    
T  50194258 gcattttgccgttatatgctattaacttggatgttgtg 50194221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 52116028 - 52115920
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||   |||  | ||| ||| | || ||||||||||||||||| |||||||| ||| |    
T  52116028 ttcaatcaatgatttaagcgtcaacattgcagatccaaaatcatgggtattctaatgattta-gattgtatcatattatttgtagtcattttgttgttat 52115930  T
Q  127 atgctattaa 136  Q
    ||| ||||||    
T  52115929 atgttattaa 52115920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 12116182 - 12116218
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| ||||||||||||||||||||||||||    
T  12116182 gttcaatcaaagatttgagcgtcaacgttgcagatcc 12116218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 22803107 - 22803151
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  22803107 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggcatg 22803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 26739300 - 26739256
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||    
T  26739300 ttttatcatattatttgtaagcattttggcgttgtatgctattaa 26739256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 44805174 - 44805218
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  44805174 ttttatcatattgtttgtaggcattttgtcattgtatgctattaa 44805218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 46220792 - 46220855
Alignment:
Q  75 atttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    |||||||||| ||||  |||||||||||||||||||| ||||||  |||||||||| ||||||||    
T  46220792 atttcagtgatttaga-ttttatcatattatttgtaggcattttaccgttgtatgccattaattt 46220855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 26716129 - 26716079
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    ||||||||| | || |||||||||||||||  |||||||||||||||||||    
T  26716129 tcagtcaatcataaattcaatcaatgattttggcgtcaacgttgcagatcc 26716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 6903071 - 6903128
Alignment:
Q  93 tttatcatattatttgta-gacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||||| ||| || | ||||||||| |||||||||||||| ||||||||||||    
T  6903071 tttatcatattgtttataagtcattttgtcattgtatgctattaacttagatattgtg 6903128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 7792130 - 7792081
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    |||||||||||||||||||| ||||||| | ||||| |||||||| ||||    
T  7792130 ttttatcatattatttgtaggcattttgccattgtaagctattaacttag 7792081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 9173897 - 9173942
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaatttag 141  Q
    |||||||||||||||| ||||||| ||||||||| |||||| ||||    
T  9173897 atcatattatttgtaggcattttgccgttgtatgttattaacttag 9173942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 51487240 - 51487269
Alignment:
Q  92 ttttatcatattatttgtagacattttgtc 121  Q
    ||||||||||||||||||||||||||||||    
T  51487240 ttttatcatattatttgtagacattttgtc 51487269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 3085240 - 3085200
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||| ||||||| ||||||| ||||||||    
T  3085240 atcatattatttgtaggcattttgccgttgtaggctattaa 3085200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 27856310 - 27856354
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||||||||| ||||||  ||||| ||||||||||    
T  27856310 ttttatcatattatttgtaggcatttttccgttgcatgctattaa 27856354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 32607553 - 32607589
Alignment:
Q  26 gttcaatcaatgatttgagcgtcaacgttgcagatcc 62  Q
    |||||||||| |||||| |||||||||||||||||||    
T  32607553 gttcaatcaaagatttgggcgtcaacgttgcagatcc 32607589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 35175553 - 35175593
Alignment:
Q  96 atcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaa 35175593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 41818280 - 41818332
Alignment:
Q  11 atcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatcca 63  Q
    |||| ||| |||||| |||||||||||||||||  ||||| ||||||||||||    
T  41818280 atcaatcatttacaaattcaatcaatgatttgaatgtcaatgttgcagatcca 41818332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 41818360 - 41818404
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||    
T  41818360 ttttatcgtattatttgtaggcattttgttgttgcatgctattaa 41818404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 50845 - 50966
Alignment:
Q  14 agtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagac 113  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||||||| |||||||| | ||||| |||||||| | |||||||||||||||||||| |    
T  50845 agtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaag-ttttatcatattatttgtaggc 50943  T
Q  114 attttgtcgttgtatgctattaa 136  Q
    |||||| | ||||||||||||||    
T  50944 attttgccattgtatgctattaa 50966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 1409 - 1547
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    |||||||||||||||| ||| | |||| ||||| ||||||||||||||| || |||||||||  |||||| |||| ||||| ||||||||||||||||||    
T  1409 catcagtcaattacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttagg-ttttatcatattatttgt 1507  T
Q  110 agacattttgtcgttgtatgctattaatttagatattgtg 149  Q
    || ||||||| |||| ||||||||||| || ||| |||||    
T  1508 aggcattttgccgttttatgctattaacttggatgttgtg 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 32772 - 32646
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||||| |||||||||| ||||| ||||||||||  |||||||||||||||||  |||||||||  ||||| |||||||| | |||||||||||||||||    
T  32772 acatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgactta-gattttatcatattatttg 32674  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||||||||| ||||| |||||||    
T  32673 taggcattttgtcgctgtatactattaa 32646  T

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Target: scaffold0121 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 31305 - 31174
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||| |||||||||| ||||||||| ||||||||| |||| ||||||||||| ||||||||   ||||| |||||||| | |||||||||||    
T  31305 agatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgactta-gattttatcatat 31207  T
Q  103 tatttgtagacattttgtcgttgtatgctatta 135  Q
    ||||| ||| |||||||||||||  ||||||||    
T  31206 tatttataggcattttgtcgttgcttgctatta 31174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 10073 - 9943
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||  |||||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||   |||||||||| || || |||||||||||    
T  10073 agatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgcagatccagaaacatgtgtatttcagtgaatt-gggttttatcatat 9975  T
Q  103 tatttgtagacattttgtcgttgtatgctatt 134  Q
    ||||||||| ||||||  |||| |||||||||    
T  9974 tatttgtaggcatttttccgttttatgctatt 9943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 34705 - 34649
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaatttagatattgt 148  Q
    |||||||||||||||||||| |||||||| |||||||||  |||| |||||| ||||    
T  34705 ttttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgt 34649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 71324 - 71199
Alignment:
Q  10 catcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgt 109  Q
    ||||||||||||| || |||||||||||||| | | ||||||||||||||||| ||||||||   ||||   ||||||| | |||||| |||||||||||    
T  71324 catcagtcaattataaattcaatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgactta-gattttattatattatttgt 71226  T
Q  110 agacattttgtcgttgtatgctattaa 136  Q
    || |||||||| |||||||||||||||    
T  71225 aggcattttgttgttgtatgctattaa 71199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 1998 - 1872
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| |||||||||||| ||||| ||||| |||| |||||||||||||||||||  || ||| |  ||||| |||| ||||| |||||||||||||||||    
T  1998 acattagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttagg-ttttatcatattatttg 1900  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| |||||||  |||||||| ||||||    
T  1899 taggcattttgctgttgtatgttattaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 8570 - 8702
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| ||||||||||  |||||| ||||| |||||||||| ||||||||||||||||||  |||| |||   ||||| |||| ||| | |||||||||||    
T  8570 agatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatg-ttttatcatat 8668  T
Q  103 tatttgtagacattttgtcgttgtatgctattaa 136  Q
    || | |||| ||||||| ||||||||||||||||    
T  8669 taatcgtaggcattttgccgttgtatgctattaa 8702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 25353 - 25465
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    ||||||||| |||||||| || |||||||||||||||||||||| ||| ||||||| || |||||  ||||| |||||||| | ||| ||||||||||||    
T  25353 gacatcagttaattacaaattaaatcaatgatttgagcgtcaacattgtagatccaaaaacatgagtatttctgtgactta-gatttgatcatattattt 25451  T
Q  108 gtagacattttgtc 121  Q
    ||||| | ||||||    
T  25452 gtagaaaatttgtc 25465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 1850 - 1723
Alignment:
Q  3 agatggacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatat 102  Q
    |||| |||||| || |||||||| |||||||||||||||| ||  ||||||||||||||| ||||||||   |||||  |||||||   |||||||||||    
T  1850 agatcgacatcggtaaattacaaattcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgactta-tattttatcatat 1752  T
Q  103 tatttgtagacattttgtcgttgtatgct 131  Q
    ||||||||| ||||||  |||||||||||    
T  1751 tatttgtaggcattttaccgttgtatgct 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 36888 - 37015
Alignment:
Q  8 gacatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattattt 107  Q
    ||||| ||| |||||||| |||||||||||||||| ||||||| |||||  |||  ||||||||   |||||||||| ||| | ||||||||||||||||    
T  36888 gacattagttaattacaaattcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgattta-gattttatcatattattt 36986  T
Q  108 gtagacattttgtcgttgtatgctattaa 136  Q
    ||||  ||||||  ||| |||||||||||    
T  36987 gtaggtattttgatgttttatgctattaa 37015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 71889 - 71769
Alignment:
Q  9 acatcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttg 108  Q
    |||| |||||||||||| ||||| ||||||||||   |||||||||| |||||| ||||||||         |||||||| | |||||||||||||||||    
T  71889 acattagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt------gtgacttaag-ttttatcatattatttg 71797  T
Q  109 tagacattttgtcgttgtatgctattaa 136  Q
    ||| ||||||| ||||||||||||||||    
T  71796 taggcattttgccgttgtatgctattaa 71769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 1700 - 1574
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    |||| |||| |||| |||||||||||||||| |  ||||||| | |||||||||| ||||   |||   |||| ||||  ||||||||||||||||||||    
T  1700 tcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtgatttaga-ttttatcatattatttgtag 1602  T
Q  112 acattttgtcgttgtatgctattaattt 139  Q
     |||||| ||||| ||||||||||||||    
T  1601 gcattttatcgttatatgctattaattt 1574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 6097 - 6233
Alignment:
Q  12 tcagtcaattacaagttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtag 111  Q
    ||||||||| |||  ||||||||||||||||   ||||| ||||||||||| ||||||||   |||   |||| ||||  ||||||||||||||||||||    
T  6097 tcagtcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttaga-ttttatcatattatttgtag 6195  T
Q  112 acattttgtcgttgtatgctattaatttagatattgtg 149  Q
    ||||||||| |||  | |||||||| || ||| |||||    
T  6196 acattttgttgttacaagctattaacttggatgttgtg 6233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 4254 - 4361
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgaaaatttcagtgacttaggcttttatcatattatttgtagacattttgtcgttgt 126  Q
    |||| |||||||  |||| |||||||||||||||||  |||| |||  ||||   ||| ||||  |||||||||||||||||||||||||||||| |||     
T  4254 ttcactcaatgacatgagtgtcaacgttgcagatccgaaagcttgagtattttgatgatttaga-ttttatcatattatttgtagacattttgtcattgg 4352  T
Q  127 atgctatta 135  Q
    |||||||||    
T  4353 atgctatta 4361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 92503 - 92459
Alignment:
Q  27 ttcaatcaatgatttgagcgtcaacgttgcagatccagaagcatg 71  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||    
T  92503 ttcaatcaatgatttggacgtcaacgttgtagatccagaagcatg 92459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 19025 - 18978
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaattt 139  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||||    
T  19025 ttttatcatattatttgtatgcattttgccgttgtatactattaattt 18978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 53341 - 53297
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||| || ||||||||||||  |||||||||||||    
T  53341 ttttatcatattatatgcagacattttgtcactgtatgctattaa 53297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 53637 - 53681
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||||| |||||||||||||||  || ||||||||||    
T  53637 ttttatcatattatgtgtagacattttgtcactgcatgctattaa 53681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 93253 - 93297
Alignment:
Q  92 ttttatcatattatttgtagacattttgtcgttgtatgctattaa 136  Q
    |||||||||||| ||||||| |||||||| ||||| |||||||||    
T  93253 ttttatcatattgtttgtaggcattttgttgttgtgtgctattaa 93297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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