View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10060_low_13 (Length: 324)

Name: NF10060_low_13
Description: NF10060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10060_low_13
NF10060_low_13
[»] chr8 (40 HSPs)
chr8 (18-110)||(8756239-8756331)
chr8 (218-307)||(42735511-42735600)
chr8 (226-307)||(7507133-7507214)
chr8 (226-307)||(23115402-23115483)
chr8 (227-307)||(41478989-41479069)
chr8 (218-307)||(26373687-26373777)
chr8 (228-307)||(26374662-26374741)
chr8 (226-300)||(42937251-42937325)
chr8 (226-307)||(2705053-2705134)
chr8 (226-307)||(24214825-24214906)
chr8 (172-222)||(8756328-8756378)
chr8 (221-300)||(24502012-24502091)
chr8 (226-307)||(5576855-5576936)
chr8 (226-307)||(32711516-32711597)
chr8 (228-300)||(32497376-32497448)
chr8 (221-300)||(10295622-10295701)
chr8 (182-222)||(8750666-8750706)
chr8 (230-307)||(42938351-42938428)
chr8 (227-307)||(43959549-43959630)
chr8 (276-315)||(2704961-2705000)
chr8 (276-315)||(5576763-5576802)
chr8 (228-300)||(14782376-14782448)
chr8 (276-315)||(24501955-24501994)
chr8 (276-315)||(26374572-26374611)
chr8 (276-315)||(32711424-32711463)
chr8 (276-315)||(41479122-41479161)
chr8 (276-315)||(42938259-42938298)
chr8 (228-300)||(44726051-44726123)
chr8 (277-315)||(7507041-7507079)
chr8 (226-300)||(8543410-8543485)
chr8 (219-300)||(4031499-4031580)
chr8 (219-300)||(19718122-19718203)
chr8 (228-300)||(7466228-7466300)
chr8 (276-315)||(23115310-23115349)
chr8 (218-300)||(18958968-18959050)
chr8 (230-300)||(39467708-39467778)
chr8 (228-302)||(43308518-43308592)
chr8 (276-312)||(18958914-18958950)
chr8 (276-312)||(39189958-39189994)
chr8 (219-300)||(42306026-42306107)
[»] scaffold0151 (1 HSPs)
scaffold0151 (226-315)||(38747-38836)
[»] chr1 (45 HSPs)
chr1 (219-307)||(45760245-45760333)
chr1 (226-307)||(953703-953784)
chr1 (226-307)||(28824607-28824688)
chr1 (219-307)||(22183247-22183335)
chr1 (226-307)||(19452085-19452166)
chr1 (226-307)||(21222032-21222113)
chr1 (226-307)||(35279556-35279637)
chr1 (226-307)||(49198502-49198583)
chr1 (226-307)||(730033-730113)
chr1 (226-307)||(47780503-47780584)
chr1 (226-300)||(6304496-6304570)
chr1 (227-307)||(47654588-47654669)
chr1 (226-302)||(33025396-33025472)
chr1 (221-300)||(50192793-50192872)
chr1 (219-307)||(14494089-14494174)
chr1 (226-300)||(35679370-35679444)
chr1 (235-304)||(31572401-31572470)
chr1 (230-307)||(49417972-49418049)
chr1 (230-304)||(42290732-42290806)
chr1 (279-315)||(47654495-47654531)
chr1 (276-315)||(730166-730205)
chr1 (228-300)||(6312460-6312532)
chr1 (228-300)||(9322742-9322814)
chr1 (228-300)||(15835295-15835367)
chr1 (276-315)||(21222165-21222204)
chr1 (276-315)||(28824515-28824554)
chr1 (276-315)||(50192694-50192733)
chr1 (226-262)||(28541388-28541424)
chr1 (231-304)||(46327931-46328004)
chr1 (276-315)||(953837-953876)
chr1 (228-300)||(8141370-8141442)
chr1 (228-300)||(9577674-9577746)
chr1 (276-315)||(19451951-19451990)
chr1 (276-315)||(22183388-22183427)
chr1 (228-300)||(25612043-25612115)
chr1 (228-300)||(29396630-29396702)
chr1 (276-315)||(29556122-29556161)
chr1 (276-315)||(35279690-35279729)
chr1 (276-315)||(45760152-45760191)
chr1 (276-315)||(47780729-47780768)
chr1 (230-300)||(28387635-28387705)
chr1 (276-315)||(6304395-6304435)
chr1 (276-304)||(27198322-27198350)
chr1 (276-315)||(33025530-33025570)
chr1 (230-262)||(48524208-48524240)
[»] chr2 (39 HSPs)
chr2 (224-307)||(44765665-44765748)
chr2 (219-307)||(24776240-24776328)
chr2 (220-307)||(14198813-14198900)
chr2 (226-307)||(20605044-20605125)
chr2 (221-307)||(1789329-1789415)
chr2 (226-300)||(22552007-22552081)
chr2 (226-307)||(16269583-16269664)
chr2 (226-307)||(31170861-31170942)
chr2 (226-300)||(12407272-12407346)
chr2 (226-307)||(9120060-9120141)
chr2 (226-307)||(35316954-35317035)
chr2 (226-307)||(305703-305785)
chr2 (218-300)||(378863-378945)
chr2 (226-307)||(26601437-26601518)
chr2 (226-305)||(19144916-19144995)
chr2 (229-304)||(28740523-28740598)
chr2 (236-307)||(32125152-32125223)
chr2 (219-300)||(26788669-26788750)
chr2 (276-315)||(305610-305649)
chr2 (276-315)||(14198722-14198761)
chr2 (276-315)||(16269717-16269756)
chr2 (276-315)||(20605262-20605301)
chr2 (276-315)||(24776381-24776420)
chr2 (228-300)||(28844449-28844521)
chr2 (276-315)||(31170769-31170808)
chr2 (228-300)||(43078569-43078641)
chr2 (276-315)||(43847672-43847711)
chr2 (217-300)||(3463554-3463637)
chr2 (229-262)||(5093319-5093352)
chr2 (226-307)||(43847538-43847619)
chr2 (228-300)||(215469-215541)
chr2 (276-315)||(1789468-1789507)
chr2 (276-315)||(5093192-5093231)
chr2 (276-315)||(12407406-12407445)
chr2 (276-315)||(22551908-22551947)
chr2 (276-315)||(26601345-26601384)
chr2 (276-315)||(44765801-44765840)
chr2 (276-304)||(378963-378991)
chr2 (219-300)||(33135508-33135589)
[»] chr4 (57 HSPs)
chr4 (221-307)||(1044695-1044781)
chr4 (226-307)||(24131207-24131288)
chr4 (226-312)||(42786657-42786744)
chr4 (226-307)||(22201905-22201986)
chr4 (226-307)||(28541588-28541669)
chr4 (226-307)||(7250008-7250089)
chr4 (226-307)||(25331021-25331102)
chr4 (227-300)||(31314970-31315043)
chr4 (226-307)||(37046687-37046768)
chr4 (219-307)||(41881318-41881407)
chr4 (223-307)||(46635877-46635962)
chr4 (226-307)||(30009912-30009993)
chr4 (234-307)||(32951071-32951144)
chr4 (226-307)||(40537380-40537461)
chr4 (226-300)||(37915675-37915749)
chr4 (217-307)||(39479592-39479681)
chr4 (276-315)||(12112969-12113008)
chr4 (276-315)||(40537288-40537327)
chr4 (244-307)||(34228817-34228880)
chr4 (229-304)||(49835051-49835126)
chr4 (228-307)||(23464845-23464926)
chr4 (218-307)||(20021226-20021315)
chr4 (226-307)||(25504874-25504954)
chr4 (276-315)||(1044831-1044870)
chr4 (225-307)||(1112783-1112864)
chr4 (276-315)||(1112917-1112956)
chr4 (228-300)||(5441296-5441368)
chr4 (276-315)||(22202039-22202078)
chr4 (219-307)||(23987139-23987227)
chr4 (276-315)||(24131115-24131154)
chr4 (276-315)||(25331155-25331194)
chr4 (228-300)||(27767948-27768020)
chr4 (228-300)||(30967541-30967613)
chr4 (276-315)||(39479500-39479539)
chr4 (276-315)||(41881226-41881265)
chr4 (276-315)||(46635785-46635824)
chr4 (228-300)||(54341036-54341108)
chr4 (273-307)||(28370903-28370937)
chr4 (273-307)||(36479424-36479458)
chr4 (274-307)||(3436531-3436564)
chr4 (226-300)||(25445984-25446057)
chr4 (226-307)||(7007263-7007344)
chr4 (222-307)||(53275722-53275807)
chr4 (226-307)||(55302733-55302814)
chr4 (276-315)||(7007398-7007437)
chr4 (276-315)||(25446074-25446113)
chr4 (276-315)||(28541722-28541761)
chr4 (276-315)||(30009820-30009859)
chr4 (276-315)||(32950979-32951018)
chr4 (276-315)||(34228726-34228765)
chr4 (276-315)||(37046595-37046634)
chr4 (276-315)||(55302867-55302906)
chr4 (219-307)||(19741143-19741230)
chr4 (226-300)||(41320640-41320712)
chr4 (274-307)||(12913161-12913194)
chr4 (229-262)||(44775953-44775986)
chr4 (226-262)||(49469211-49469247)
[»] chr7 (50 HSPs)
chr7 (226-307)||(44343630-44343711)
chr7 (221-307)||(30440683-30440769)
chr7 (226-307)||(8078287-8078368)
chr7 (226-307)||(973075-973157)
chr7 (221-307)||(12893295-12893381)
chr7 (226-307)||(18914969-18915050)
chr7 (227-300)||(20275504-20275577)
chr7 (226-307)||(34695123-34695204)
chr7 (226-307)||(39219569-39219650)
chr7 (226-307)||(43581324-43581405)
chr7 (226-307)||(47879060-47879141)
chr7 (226-307)||(47914158-47914239)
chr7 (224-307)||(32143153-32143237)
chr7 (228-307)||(43679363-43679443)
chr7 (226-307)||(31638767-31638848)
chr7 (227-307)||(727405-727485)
chr7 (226-307)||(34008907-34008985)
chr7 (226-307)||(40996883-40996965)
chr7 (228-301)||(7719501-7719574)
chr7 (218-307)||(10068343-10068432)
chr7 (219-300)||(28342225-28342306)
chr7 (276-315)||(973210-973249)
chr7 (276-315)||(7718504-7718543)
chr7 (276-315)||(7719402-7719441)
chr7 (276-315)||(18914877-18914916)
chr7 (228-300)||(29615005-29615077)
chr7 (276-315)||(34009038-34009077)
chr7 (218-300)||(21067759-21067841)
chr7 (228-300)||(509585-509657)
chr7 (276-315)||(727538-727577)
chr7 (228-300)||(7993029-7993101)
chr7 (276-315)||(12893434-12893473)
chr7 (276-315)||(20275405-20275444)
chr7 (228-300)||(23101185-23101257)
chr7 (219-307)||(29893001-29893089)
chr7 (276-315)||(30440822-30440861)
chr7 (276-315)||(34695299-34695338)
chr7 (276-315)||(39219518-39219557)
chr7 (276-311)||(40996795-40996830)
chr7 (219-307)||(43187577-43187665)
chr7 (276-315)||(43581232-43581271)
chr7 (276-315)||(44343538-44343577)
chr7 (276-307)||(47066680-47066711)
chr7 (276-315)||(47879194-47879233)
chr7 (276-315)||(47914292-47914331)
chr7 (228-300)||(48117834-48117906)
chr7 (228-298)||(32883668-32883738)
chr7 (228-302)||(33892490-33892564)
chr7 (219-300)||(18838267-18838348)
chr7 (223-300)||(41827196-41827273)
[»] chr6 (15 HSPs)
chr6 (226-307)||(2300972-2301053)
chr6 (221-307)||(6197712-6197798)
chr6 (226-307)||(1391514-1391595)
chr6 (219-307)||(29076480-29076569)
chr6 (219-307)||(29111453-29111542)
chr6 (276-315)||(656989-657028)
chr6 (276-315)||(6197620-6197659)
chr6 (228-300)||(31895588-31895660)
chr6 (278-315)||(1391650-1391687)
chr6 (241-307)||(7051750-7051816)
chr6 (219-300)||(14262674-14262755)
chr6 (276-315)||(2300880-2300919)
chr6 (276-315)||(28002689-28002728)
chr6 (228-300)||(34773301-34773373)
chr6 (219-259)||(25839718-25839758)
[»] chr5 (25 HSPs)
chr5 (226-307)||(7016931-7017012)
chr5 (221-307)||(21146953-21147039)
chr5 (226-307)||(33656277-33656358)
chr5 (221-306)||(43319132-43319218)
chr5 (226-307)||(6460683-6460764)
chr5 (230-307)||(32158133-32158210)
chr5 (270-315)||(849166-849211)
chr5 (225-307)||(16894094-16894175)
chr5 (226-307)||(27459183-27459264)
chr5 (227-307)||(9689553-9689632)
chr5 (227-300)||(5273202-5273276)
chr5 (228-300)||(4550498-4550570)
chr5 (228-300)||(14000346-14000418)
chr5 (276-315)||(16894044-16894083)
chr5 (276-315)||(21147092-21147131)
chr5 (276-315)||(33656183-33656222)
chr5 (228-300)||(37013807-37013879)
chr5 (270-307)||(14465460-14465497)
chr5 (276-315)||(7016881-7016920)
chr5 (276-307)||(22746280-22746311)
chr5 (276-315)||(27459091-27459130)
chr5 (218-304)||(5948992-5949078)
chr5 (276-312)||(5273064-5273100)
chr5 (275-315)||(9220849-9220889)
chr5 (276-304)||(26795517-26795545)
[»] chr3 (54 HSPs)
chr3 (226-307)||(996320-996401)
chr3 (226-307)||(3206431-3206512)
chr3 (221-306)||(12734076-12734161)
chr3 (230-307)||(19253721-19253798)
chr3 (221-307)||(20498095-20498180)
chr3 (226-307)||(10139381-10139462)
chr3 (230-307)||(37820712-37820789)
chr3 (221-307)||(40246729-40246815)
chr3 (228-305)||(29029898-29029975)
chr3 (236-307)||(35337635-35337706)
chr3 (226-300)||(52114420-52114494)
chr3 (226-298)||(22057653-22057726)
chr3 (226-307)||(29449095-29449176)
chr3 (228-307)||(6589455-6589535)
chr3 (226-307)||(33808034-33808118)
chr3 (276-315)||(3206348-3206387)
chr3 (276-315)||(3999788-3999827)
chr3 (276-315)||(10139289-10139328)
chr3 (228-300)||(10660427-10660499)
chr3 (276-315)||(19253851-19253890)
chr3 (276-315)||(20498233-20498272)
chr3 (276-315)||(29030030-29030069)
chr3 (276-315)||(33807942-33807981)
chr3 (276-315)||(33996684-33996723)
chr3 (276-315)||(35337759-35337798)
chr3 (228-300)||(36674372-36674444)
chr3 (276-315)||(53929271-53929310)
chr3 (228-307)||(539616-539695)
chr3 (228-300)||(1440194-1440265)
chr3 (221-262)||(16010748-16010789)
chr3 (245-307)||(44762272-44762334)
chr3 (276-312)||(6589588-6589624)
chr3 (218-307)||(10728834-10728923)
chr3 (219-300)||(31646526-31646607)
chr3 (226-262)||(33996771-33996807)
chr3 (226-307)||(51699714-51699795)
chr3 (276-315)||(996229-996268)
chr3 (276-315)||(1440095-1440134)
chr3 (228-300)||(23753628-23753700)
chr3 (276-315)||(25418390-25418429)
chr3 (228-300)||(27240485-27240557)
chr3 (228-300)||(39842671-39842743)
chr3 (276-315)||(51699622-51699661)
chr3 (276-315)||(52114552-52114591)
chr3 (228-307)||(15493966-15494045)
chr3 (221-300)||(18749455-18749534)
chr3 (226-260)||(52079883-52079917)
chr3 (270-307)||(6131447-6131484)
chr3 (230-300)||(44906755-44906825)
chr3 (276-312)||(6131317-6131353)
chr3 (276-304)||(10104898-10104926)
chr3 (276-304)||(10216045-10216073)
chr3 (276-312)||(51737915-51737951)
chr3 (226-262)||(54625482-54625518)
[»] scaffold0113 (2 HSPs)
scaffold0113 (226-300)||(39095-39169)
scaffold0113 (276-315)||(39038-39077)
[»] scaffold0651 (1 HSPs)
scaffold0651 (227-300)||(8654-8727)
[»] scaffold0037 (2 HSPs)
scaffold0037 (226-300)||(100102-100176)
scaffold0037 (276-315)||(100236-100275)
[»] scaffold0400 (2 HSPs)
scaffold0400 (219-307)||(15268-15353)
scaffold0400 (276-315)||(15176-15215)
[»] scaffold0365 (2 HSPs)
scaffold0365 (219-307)||(15911-15996)
scaffold0365 (276-315)||(15819-15858)
[»] scaffold0306 (1 HSPs)
scaffold0306 (217-307)||(13806-13896)
[»] scaffold0152 (1 HSPs)
scaffold0152 (217-307)||(21431-21521)
[»] scaffold0543 (1 HSPs)
scaffold0543 (228-300)||(10453-10525)
[»] scaffold0276 (2 HSPs)
scaffold0276 (276-315)||(682-721)
scaffold0276 (275-307)||(774-806)
[»] scaffold0010 (3 HSPs)
scaffold0010 (275-307)||(222551-222583)
scaffold0010 (275-307)||(233719-233751)
scaffold0010 (275-307)||(234567-234599)
[»] scaffold0004 (2 HSPs)
scaffold0004 (226-262)||(102027-102063)
scaffold0004 (280-315)||(102124-102159)
[»] scaffold1504 (1 HSPs)
scaffold1504 (228-300)||(756-828)
[»] scaffold0042 (1 HSPs)
scaffold0042 (228-300)||(58276-58348)


Alignment Details
Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 8756239 - 8756331
Alignment:
Q  18 ggttttagctttgtcagacgaagcatgcttgaattctgagaaatgaaatgaaatgcgatactggttgcggaggtgagtaatgatgagtaatgg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8756239 ggttttagctttgtcagacgaagcatgcttgaattctgagaaatgaaatgaaatgcgatactggttgcggaggtgagtgatgatgagtaatgg 8756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 42735600 - 42735511
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  42735600 ttaaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42735511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 7507214 - 7507133
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  7507214 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 7507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 23115483 - 23115402
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  23115483 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 23115402  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 41478989 - 41479069
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 41479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 26373687 - 26373777
Alignment:
Q  218 ttaagggaggtgtattgg-atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  26373687 ttaaggggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 26373777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 26374741 - 26374662
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||| ||||||    
T  26374741 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 26374662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 42937251 - 42937325
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||    
T  42937251 ggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 42937325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 2705134 - 2705053
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||| ||| |||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  2705134 ggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 2705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 24214906 - 24214825
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||| |||||||||||||       ||||| ||||||||||||||||||||||||| ||||||    
T  24214906 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctt 24214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 8756328 - 8756378
Alignment:
Q  172 atggtaaaagcatttttcattcttttttgcttctaccgtatggtagttaag 222  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8756328 atggtaaaagcatttttcattcttttttgctactaccgtatggtagttaag 8756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 24502091 - 24502012
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||| ||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||| |||||||||||    
T  24502091 aggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaa 24502012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 5576936 - 5576855
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||| ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||| ||||||    
T  5576936 ggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctt 5576855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 32711597 - 32711516
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||| || |||||||||       ||||||||||||| ||||||||||||||||| ||||||    
T  32711597 ggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactctt 32711516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 32497376 - 32497448
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       |||||||||||||||||||||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaa 32497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 10295701 - 10295622
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  10295701 agggagatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaa 10295622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 8750666 - 8750706
Alignment:
Q  182 catttttcattcttttttgcttctaccgtatggtagttaag 222  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8750666 catttttcattcttttctgcttctaccgtatggtagttaag 8750706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 42938428 - 42938351
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| || ||| |||||||||||||||||       | ||||||||||||||||||||||||||||| ||||||    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactctt 42938351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 43959549 - 43959630
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| |||||||||| ||| |||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 43959630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 2705000 - 2704961
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  2705000 aaaaagtcttgtggtattcaatcaagactcttaatcactt 2704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 5576802 - 5576763
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5576802 aaaaagtcttgtggtattcaatcaagactcttaatcactt 5576763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 14782448 - 14782376
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  14782448 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 14782376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 24501994 - 24501955
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  24501994 aaaaagtcttgtggtattcaatcaagactcttaatcactt 24501955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 26374611 - 26374572
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26374611 aaaaagtcttgtggtattcaatcaagactcttaatcactt 26374572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 32711463 - 32711424
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  32711463 aaaaagtcttgtggtattcaatcaagactcttaatcactt 32711424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 41479122 - 41479161
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  41479122 aaaaagtcttgtggtattcaatcaagactcttaatcactt 41479161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 42938298 - 42938259
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  42938298 aaaaagtcttgtggtattcaatcaagactcttaatcactt 42938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 44726123 - 44726051
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  44726123 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 44726051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 7507079 - 7507041
Alignment:
Q  277 aaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7507079 aaaagtcttgtggtattcaatcaagactcttaatcactt 7507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 8543410 - 8543485
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| ||||||||||||||||||||||||||||        ||||| ||||||| |||||||||||||||||    
T  8543410 ggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaa 8543485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 4031580 - 4031499
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||| |||||    
T  4031580 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaa 4031499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 19718203 - 19718122
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| |||||||||| | ||||||| ||||||||||||||       || ||||||||||| || |||||||||||||    
T  19718203 taagggagatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaa 19718122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 7466228 - 7466300
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  7466228 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 7466300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 23115349 - 23115310
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  23115349 aaaatgtcttgtggtattcaatcaagactcttaatcactt 23115310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 18959050 - 18958968
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||| ||||||||||||    
T  18959050 ttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaa 18958968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 39467778 - 39467708
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 39467708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 43308592 - 43308518
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaa 302  Q
    |||||||||| | ||||||| || |||||||||||       || ||||||||||||| ||||||||||||||||    
T  43308592 tgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaaaa 43308518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 18958950 - 18958914
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  18958950 aaaaagtcttgtggtattcaatcaagactctttatca 18958914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 39189994 - 39189958
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  39189994 aaaaagtcttgtggtattcaataaaaactctttatca 39189958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 42306107 - 42306026
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||| |||||||||||    
T  42306107 taagggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaa 42306026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 38836 - 38747
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||    
T  38836 ggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactcttaatcactt 38747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 45760333 - 45760245
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  45760333 taaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactctt 45760245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 953703 - 953784
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  953703 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 953784  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 28824688 - 28824607
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  28824688 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 28824607  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 22183247 - 22183335
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| ||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  22183247 taaggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 22183335  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 19452166 - 19452085
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||| ||||||    
T  19452166 ggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctt 19452085  T

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Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 21222032 - 21222113
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  21222032 ggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 21222113  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 35279556 - 35279637
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  35279556 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 35279637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 49198583 - 49198502
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  49198583 ggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 49198502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 730033 - 730113
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||    
T  730033 ggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctt 730113  T

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Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 47780503 - 47780584
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  47780503 ggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 47780584  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 6304570 - 6304496
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||||||    
T  6304570 ggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaa 6304496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 47654669 - 47654588
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||| ||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctt 47654588  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 302
Target Start/End: Original strand, 33025396 - 33025472
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaa 302  Q
    |||||||||||||||||||||||| || |||||||||       ||||||||||| |||||||||||||||||||||    
T  33025396 ggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaa 33025472  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 50192872 - 50192793
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||| ||||||||| ||||||||||||||| |||||||||||       || ||||||||||||||||||||||||||||    
T  50192872 aggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaa 50192793  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 14494089 - 14494174
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  14494089 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctt 14494174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 35679444 - 35679370
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||| ||||||||| |||||||||||||||||       || ||||||||||||||||||||||||||||    
T  35679444 ggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaa 35679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 31572470 - 31572401
Alignment:
Q  235 gatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||| |||       |||||||||||||||||||||||||| ||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaaaact 31572401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 49417972 - 49418049
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||| ||||||||||||       |||||||||||||| |||| ||||||||||| ||||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctt 49418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 42290732 - 42290806
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaact 42290806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 47654531 - 47654495
Alignment:
Q  279 aagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||||||||||||||||||||||    
T  47654531 aagtcttgtggtattcaatcaaaactcttaatcactt 47654495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 730166 - 730205
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  730166 aaaaagtcttgtggtattcaatcaagactcttaatcactt 730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 6312460 - 6312532
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  6312460 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 6312532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 9322814 - 9322742
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  9322814 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 9322742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 15835367 - 15835295
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 15835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 21222165 - 21222204
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  21222165 aaaaagtcttgtggtattcaatcaagactcttaatcactt 21222204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 28824554 - 28824515
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  28824554 aaaaagtcttgtggtattcaatcaagactcttaatcactt 28824515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 50192733 - 50192694
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  50192733 aaaaagtcttgtggtattcaatcaagactcttaatcactt 50192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 28541388 - 28541424
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga 262  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28541388 ggtgtattggatcatgattctaagcgattttaaaaga 28541424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 46327931 - 46328004
Alignment:
Q  231 attggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    ||||||| | ||||||| ||||||||||||||       || |||||||||||||||| |||||||||||||||    
T  46327931 attggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaact 46328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 953837 - 953876
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  953837 aaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 8141442 - 8141370
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||| || | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  8141442 tgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 8141370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 9577746 - 9577674
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||| ||||||||||||||||       || |||||||||| |||||||||||||||||    
T  9577746 tgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaa 9577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 19451990 - 19451951
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  19451990 aaaaagtcttgtggtatttaatcaagactcttaatcactt 19451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 22183388 - 22183427
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  22183388 aaaaagtcttgtggtattcaatcaagattcttaatcactt 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 25612043 - 25612115
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||| |||||||||||||||||||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 25612115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 29396702 - 29396630
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| || |||||||||||       || ||||||||||||||||||||||||||||    
T  29396702 tgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 29396630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 29556122 - 29556161
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  29556122 aaaaagtcttgtgttattcaatcaagactcttaatcactt 29556161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 35279690 - 35279729
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  35279690 aaaaagtcttgtggtattcaatcaagactattaatcactt 35279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 45760191 - 45760152
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  45760191 aaaaagtcatgtggtattcaatcaagactcttaatcactt 45760152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 47780729 - 47780768
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  47780729 aaaaagtcatgtggtattcaatcaagactcttaatcactt 47780768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 28387705 - 28387635
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| | ||||||| ||||||||||||||       || ||||||||||||| ||||||||||||||    
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaa 28387635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 6304435 - 6304395
Alignment:
Q  276 aaaaagtcttgtggtattcaatc-aaaactcttaatcactt 315  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  6304435 aaaaagtcttgtggtattcaaccaaaaactcttaatcactt 6304395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 304
Target Start/End: Original strand, 27198322 - 27198350
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||||||||    
T  27198322 aaaaagtcttgtggtattcaatcaaaact 27198350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 33025530 - 33025570
Alignment:
Q  276 aaaaagtcttgtggtattcaatc-aaaactcttaatcactt 315  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  33025530 aaaaattcttgtggtattcaatcaaaaactcttaatcactt 33025570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 48524208 - 48524240
Alignment:
Q  230 tattggatcatgattctaagggattttaaaaga 262  Q
    ||||||||||||||||||||| |||||||||||    
T  48524208 tattggatcatgattctaaggaattttaaaaga 48524240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 44765665 - 44765748
Alignment:
Q  224 gaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  44765665 gaggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctt 44765748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 24776240 - 24776328
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  24776240 taaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 24776328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 14198900 - 14198813
Alignment:
Q  220 aagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  14198900 aagggtggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 14198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 20605044 - 20605125
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  20605044 ggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctt 20605125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 1789329 - 1789415
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||| ||||||||||||       ||||| ||||||||||||||||||||||||||||||||    
T  1789329 aggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctt 1789415  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 22552081 - 22552007
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  22552081 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 22552007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 16269583 - 16269664
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  16269583 ggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctt 16269664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 31170942 - 31170861
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||| ||||||    
T  31170942 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 31170861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 12407272 - 12407346
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||    
T  12407272 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 12407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 9120060 - 9120141
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||| || |||||||||||||||| ||||||    
T  9120060 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctt 9120141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 35316954 - 35317035
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| ||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||| ||||||    
T  35316954 ggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 35317035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 305785 - 305703
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  305785 ggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 305703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 378863 - 378945
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||       || ||||||||||||||||||||||||||||    
T  378863 ttaagggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 378945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 26601518 - 26601437
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||| |||||| |||||||||||||       || || ||||||||||||||||||||||||||||||||    
T  26601518 ggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctt 26601437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 19144916 - 19144995
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactc 305  Q
    |||||||||||  |||||||||||||||||||||| |       ||||| ||||||||||||||||||||||||||||||    
T  19144916 ggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactc 19144995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 28740598 - 28740523
Alignment:
Q  229 gtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    ||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaact 28740523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 32125152 - 32125223
Alignment:
Q  236 atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactctt 32125223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 26788669 - 26788750
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  26788669 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 26788750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 305649 - 305610
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  305649 aaaaagtcttgtggtattcaatcaagactcttaatcactt 305610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 14198761 - 14198722
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  14198761 aaaaagtcttgtggtattcaatcaagactcttaatcactt 14198722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 16269717 - 16269756
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  16269717 aaaaagtcttgtggtattcaatcaagactcttaatcactt 16269756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 20605262 - 20605301
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  20605262 aaaaagtcttgtggtattcaatcaagactcttaatcactt 20605301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 24776381 - 24776420
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  24776381 aaaaagtcttgtggtattcaatcaagactcttaatcactt 24776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 28844449 - 28844521
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  28844449 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 28844521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 31170808 - 31170769
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  31170808 aaaaagtcttgtggtattcaatcaagactcttaatcactt 31170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 43078569 - 43078641
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaa 43078641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 43847672 - 43847711
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  43847672 aaaaagtcttgtggtattcaatcaagactcttaatcactt 43847711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 3463554 - 3463637
Alignment:
Q  217 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| | |||||||||| ||||||||| | ||||||||||||       || |||||||| |||||||||||||||||||    
T  3463554 gttaagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 3463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 262
Target Start/End: Complemental strand, 5093352 - 5093319
Alignment:
Q  229 gtattggatcatgattctaagggattttaaaaga 262  Q
    ||||||||||||||||||||||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaaga 5093319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 43847538 - 43847619
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| |||||||  |||||||||||||||||||       ||| |||||||||||| | |||||||| ||||||||||    
T  43847538 ggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctt 43847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 215541 - 215469
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  215541 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 215469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 1789468 - 1789507
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  1789468 aaaaagtcttatgatattcaatcaaaactcttaatcactt 1789507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 5093231 - 5093192
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  5093231 aaaaagtcttgtggtattcaatcaagacgcttaatcactt 5093192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 12407406 - 12407445
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  12407406 aaaaagtcttgtggtattcaatcgagactcttaatcactt 12407445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 22551947 - 22551908
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  22551947 aaaaagtcttgtggtattcaatcaagacttttaatcactt 22551908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 26601384 - 26601345
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  26601384 aaaaagtcttgtagtattcaatcaagactcttaatcactt 26601345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 44765801 - 44765840
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  44765801 aaaaagtcttgtggtattcaatcgagactcttaatcactt 44765840  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 304
Target Start/End: Original strand, 378963 - 378991
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||||||||    
T  378963 aaaaagtcttgtggtattcaatcaaaact 378991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 33135508 - 33135589
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | |||||||  |||||||||||||       || ||||||||||||| ||||||||||||||    
T  33135508 taagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaa 33135589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 1044695 - 1044781
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  1044695 aggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 1044781  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 24131288 - 24131207
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  24131288 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 24131207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 42786657 - 42786744
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  42786657 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactcttaatca 42786744  T

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Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 22201905 - 22201986
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||| ||||||    
T  22201905 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 22201986  T

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Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 28541588 - 28541669
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  28541588 ggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactctt 28541669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 7250089 - 7250008
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  7250089 ggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctt 7250008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 25331021 - 25331102
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||  ||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  25331021 ggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 25331102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 31315043 - 31314970
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaa 31314970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 37046768 - 37046687
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||| |||||||||||       ||||| ||||||||||||||||||||||||| ||||||    
T  37046768 ggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactctt 37046687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 41881407 - 41881318
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| ||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  41881407 taaggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 41881318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 46635962 - 46635877
Alignment:
Q  223 ggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatg-aaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||| ||||||||||||||||||||||||| ||||||    
T  46635962 ggaggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctt 46635877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 30009993 - 30009912
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       || ||||||||||||| | |||||||||||| ||||||    
T  30009993 ggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctt 30009912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 32951144 - 32951071
Alignment:
Q  234 ggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactctt 32951071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 40537461 - 40537380
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||| |||||||||||||||||       ||||| |||||||||||||||||||||| || ||||||    
T  40537461 ggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctt 40537380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 37915675 - 37915749
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||| ||||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  37915675 ggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 37915749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 39479681 - 39479592
Alignment:
Q  217 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||       ||||| ||||||||||||||||||||||||| ||||||    
T  39479681 gttaaggg-ggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctt 39479592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 12112969 - 12113008
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12112969 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 12113008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 40537327 - 40537288
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40537327 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 40537288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 34228880 - 34228817
Alignment:
Q  244 tctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 34228817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 49835126 - 49835051
Alignment:
Q  229 gtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    ||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaact 49835051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 23464845 - 23464926
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnn--atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||| |||||||||||| |||||||||||         ||||||||||||||||||||||||||||||| ||||||    
T  23464845 tgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 23464926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 20021226 - 20021315
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| | |||||||||| || ||| |||||||||||||||||       || ||||||||||||||||||||| |||||| ||||||    
T  20021226 ttaagggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctt 20021315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 25504954 - 25504874
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||| | |||||| ||||||||||| |       ||||||||||||||||||||||||||||||| ||||||    
T  25504954 ggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 25504874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 1044831 - 1044870
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  1044831 aaaaagtcttgtggtattcaatcaagactcttaatcactt 1044870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 307
Target Start/End: Original strand, 1112783 - 1112864
Alignment:
Q  225 aggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||  |||||||||||        ||||||||||||||||||| ||||||||||| ||||||    
T  1112783 aggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctt 1112864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 1112917 - 1112956
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  1112917 aaaaagtcttgtggtattcaatcaagactcttaatcactt 1112956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 5441296 - 5441368
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  5441296 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 5441368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 22202039 - 22202078
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  22202039 aaaaagtcttgtggtattcaatcaagactcttaatcactt 22202078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 23987139 - 23987227
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| | |||||||||| | |||| || ||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  23987139 taagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctt 23987227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 24131154 - 24131115
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  24131154 aaaaagtcttgtggtattcaatcaagactcttaatcactt 24131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 25331155 - 25331194
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  25331155 aaaaagtcttgtggtattcaatcaagactcttaatcactt 25331194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 27767948 - 27768020
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  27767948 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 27768020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 30967613 - 30967541
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| |||||| || ||||||||||||||       || ||||||||||||||||||||||||||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 30967541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 39479539 - 39479500
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  39479539 aaaaagtcttgtggtattcaatcaagactcttaatcactt 39479500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 41881265 - 41881226
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  41881265 aaaaagtcttgtggtattcaatcaagactcttaatcactt 41881226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 46635824 - 46635785
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  46635824 aaaaagtcttgtggtattcaatcaagactcttaatcactt 46635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 54341036 - 54341108
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 54341108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 28370903 - 28370937
Alignment:
Q  273 atgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||    
T  28370903 atgaaaaagtcttgtggtattcaatcaaaactctt 28370937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 36479458 - 36479424
Alignment:
Q  273 atgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||    
T  36479458 atgaaaaagtcttgtggtattcaatcaaaactctt 36479424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 3436531 - 3436564
Alignment:
Q  274 tgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||||    
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactctt 3436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 25445984 - 25446057
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||| |||||| |||||||||||||||||       ||||||||||||||||||  |||||||||||    
T  25445984 ggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaa 25446057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 7007263 - 7007344
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||| ||||||||| ||||||||||||| |||       || |||||||||| ||||||||||||||||| ||||||    
T  7007263 ggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactctt 7007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 53275722 - 53275807
Alignment:
Q  222 gggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||| ||||||||| |       ||||||||||| |||||  | |||||||||| ||||||    
T  53275722 gggatgtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttgcaggattcaatcaagactctt 53275807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 55302733 - 55302814
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| ||||||||| |||||||||||| ||||       || |||||||||| || |||||||||||||| ||||||    
T  55302733 ggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactctt 55302814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 7007398 - 7007437
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  7007398 aaaaagtcatgtggtattcaatcaagactcttaatcactt 7007437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 25446074 - 25446113
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  25446074 aaaaattcttgtggtattcaatcaagactcttaatcactt 25446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 28541722 - 28541761
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  28541722 aaaaagtctcgtggtattcaatcaagactcttaatcactt 28541761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 30009859 - 30009820
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  30009859 aaaaagtcctgtggtattcaatcaagactcttaatcactt 30009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 32951018 - 32950979
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  32951018 aaaaagtcatgtggtattcaatcaagactcttaatcactt 32950979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 34228765 - 34228726
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  34228765 aaaaagtcatgtggtattcaatcaaaattcttaatcactt 34228726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 37046634 - 37046595
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  37046634 aaaaagttttgtggtattcaatcaagactcttaatcactt 37046595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 55302867 - 55302906
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  55302867 aaaaagtcatgtggtattcaatcaagactcttaatcactt 55302906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 19741230 - 19741143
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| | ||||||  |||||||||||||  ||||||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  19741230 taagggggatgtattcaatcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctt 19741143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 41320640 - 41320712
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||||||||||||||  ||||||||||||       || |||||||||||  |||||||||||||||    
T  41320640 ggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaa 41320712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 12913161 - 12913194
Alignment:
Q  274 tgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||| ||||||    
T  12913161 tgaaaaagtcttgtggtattcaatcaagactctt 12913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 262
Target Start/End: Complemental strand, 44775986 - 44775953
Alignment:
Q  229 gtattggatcatgattctaagggattttaaaaga 262  Q
    |||||||||||||||||||| |||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaaga 44775953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 49469211 - 49469247
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga 262  Q
    |||||||||||||||||||| |||| |||||||||||    
T  49469211 ggtgtattggatcatgattccaaggaattttaaaaga 49469247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 44343711 - 44343630
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  44343711 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 44343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 30440683 - 30440769
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  30440683 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctt 30440769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 8078287 - 8078368
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||    
T  8078287 ggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctt 8078368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 973075 - 973157
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  973075 ggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 973157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 12893295 - 12893381
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| ||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||| ||||||    
T  12893295 aggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctt 12893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 18915050 - 18914969
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||  |||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  18915050 ggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 18914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 20275577 - 20275504
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaa 20275504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 34695123 - 34695204
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  34695123 ggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctt 34695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 39219650 - 39219569
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||| ||||||||| |||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  39219650 ggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 39219569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 43581405 - 43581324
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||| | |||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  43581405 ggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 43581324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 47879060 - 47879141
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  47879060 ggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactctt 47879141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 47914158 - 47914239
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  47914158 ggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactctt 47914239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 32143237 - 32143153
Alignment:
Q  224 gaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||| ||||||    
T  32143237 gaggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 32143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 43679363 - 43679443
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 43679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 31638767 - 31638848
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||| ||||||||||||       |||||||||||||| |||||||||||||||| ||||||    
T  31638767 ggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactctt 31638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 727405 - 727485
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||| |||||||||| ||       ||||||||||||||||| ||||||||||||| ||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactctt 727485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 34008907 - 34008985
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||   |||||||||||||| ||||||    
T  34008907 ggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtc---tggtattcaatcaagactctt 34008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 40996965 - 40996883
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||||| |        ||||||||| ||||||||||||||||||||| ||||||    
T  40996965 ggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctt 40996883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 7719574 - 7719501
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaa 301  Q
    ||||||||||||||||| |||  ||||||||||||       ||||||||||| ||||||||||||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaa 7719501  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 10068343 - 10068432
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| | |||||||||  |||||||| | |||||||||||||       || |||||||||||||||| ||||||||||||||||||    
T  10068343 ttaagggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctt 10068432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 28342225 - 28342306
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  28342225 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 28342306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 973210 - 973249
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  973210 aaaaagtcttgtggtattcaatcaagactcttaatcactt 973249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 7718543 - 7718504
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  7718543 aaaaagtcttgtggtattcaatcaagactcttaatcactt 7718504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 7719441 - 7719402
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  7719441 aaaaagtcttgtggtattcaatcaagactcttaatcactt 7719402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 18914916 - 18914877
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  18914916 aaaaagtcttgtggtattcaatcaagactcttaatcactt 18914877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 29615077 - 29615005
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| ||||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  29615077 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 29615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 34009038 - 34009077
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  34009038 aaaaagtcttgtggtattcaatcaacactcttaatcactt 34009077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 21067759 - 21067841
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  21067759 ttaagggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 21067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 509585 - 509657
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | |||| || ||||||||||||||       || ||||||||||||||||||||||||||||    
T  509585 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 509657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 727538 - 727577
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  727538 aaaaagtcttgtgatattcaatcaaaactctttatcactt 727577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 7993029 - 7993101
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | |||||||  |||||||||||||       || ||||||||||||||||||||||||||||    
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 7993101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 12893434 - 12893473
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  12893434 aaaaagtcttgtggtatttaatcaagactcttaatcactt 12893473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 20275444 - 20275405
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  20275444 aaaaagtcttatggtattcaatcaagactcttaatcactt 20275405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 23101185 - 23101257
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||| |||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  23101185 tgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 23101257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 29893001 - 29893089
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| | |||||| ||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  29893001 taagggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctt 29893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 30440822 - 30440861
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  30440822 aaaaaatcttgtggtattcaatcaagactcttaatcactt 30440861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 34695299 - 34695338
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  34695299 aaaaagttttgtggtattcaatcaagactcttaatcactt 34695338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 39219557 - 39219518
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  39219557 aaaaagtcttgtgttattcaatcaagactcttaatcactt 39219518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 311
Target Start/End: Complemental strand, 40996830 - 40996795
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatc 311  Q
    ||||||||||||||||||||||||| ||||||||||    
T  40996830 aaaaagtcttgtggtattcaatcaagactcttaatc 40996795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 43187665 - 43187577
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| | |||||||||||   |||||||| ||||||||||||       || |||||| ||||||||||||||||||||| ||||||    
T  43187665 taagggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctt 43187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 43581271 - 43581232
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  43581271 aaaaagtcttgttgtattcaatcaagactcttaatcactt 43581232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 44343577 - 44343538
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  44343577 aaaaagtcttgtgatattcaatcaagactcttaatcactt 44343538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 307
Target Start/End: Original strand, 47066680 - 47066711
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||    
T  47066680 aaaaagtcttgtggtattcaatcaaaactctt 47066711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 47879194 - 47879233
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  47879194 aaaaagtcatgtggtattcaatcaagactcttaatcactt 47879233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 47914292 - 47914331
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  47914292 aaaaagtcatgtggtattcaatcaagactcttaatcactt 47914331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 48117906 - 48117834
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| |  |||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  48117906 tgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 48117834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 32883668 - 32883738
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatc 298  Q
    |||||||||| ||||||||| ||||||||||||||       || |||||||||| ||||| |||||||||    
T  32883668 tgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatc 32883738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 33892564 - 33892490
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaa 302  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||| |||||||||||||||||||    
T  33892564 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaa 33892490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 18838267 - 18838348
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| |||||| |||||||       || ||||||| ||||||||||||||||||||    
T  18838267 taagggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaa 18838348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 41827196 - 41827273
Alignment:
Q  223 ggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||| |||||||||| |  ||| || ||||||||||||||       || ||||||||||||||||||||||||||||    
T  41827196 ggagatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 41827273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 2301053 - 2300972
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  2301053 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 2300972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 307
Target Start/End: Complemental strand, 6197798 - 6197712
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| ||||||||||||||||||||||||||||||||||| |       |||||||||||||| |||||||||||||||| ||||||    
T  6197798 aggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctt 6197712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 1391514 - 1391595
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||| |||||||||| ||       ||||||||||||||||||||||||||||||| ||||||    
T  1391514 ggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 1391595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 29076480 - 29076569
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||| ||||||||||| ||||||    
T  29076480 taaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 29076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 29111453 - 29111542
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||| ||||||||||| ||||||    
T  29111453 taaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 29111542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 656989 - 657028
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  656989 aaaaagtcttgtggtattcaatcaagactcttaatcactt 657028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 6197659 - 6197620
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  6197659 aaaaagtcttgtggtattcaatcaagactcttaatcactt 6197620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 31895588 - 31895660
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  31895588 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 31895660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 1391650 - 1391687
Alignment:
Q  278 aaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1391650 aaagtcttgtggtattcaatcaagactcttaatcactt 1391687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 7051750 - 7051816
Alignment:
Q  241 gattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| ||||||||||||       ||||||||||||||||||| ||||||||||| ||||||    
T  7051750 gattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctt 7051816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 14262755 - 14262674
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||| |||||||||||||||||||    
T  14262755 taagggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 14262674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 2300919 - 2300880
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  2300919 aaaaagtcttgtggtattcaatcaagactcttgatcactt 2300880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 28002689 - 28002728
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  28002689 aaaaagtcttctggtattcaatcaagactcttaatcactt 28002728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 34773301 - 34773373
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | |||| || ||||||||||||||       || ||||||||||||||||||||||||||||    
T  34773301 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 34773373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 25839718 - 25839758
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaa 259  Q
    |||||| | ||||||||||||||||| ||||||||||||||    
T  25839718 taagggggatgtattggatcatgattgtaagggattttaaa 25839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 7017012 - 7016931
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  7017012 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 7016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 21146953 - 21147039
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||| ||||||    
T  21146953 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctt 21147039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 33656358 - 33656277
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  33656358 ggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 33656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 43319132 - 43319218
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactct 306  Q
    |||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||    
T  43319132 aggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 6460683 - 6460764
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  6460683 ggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctt 6460764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 32158210 - 32158133
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||| ||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  32158210 tattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 32158133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 849166 - 849211
Alignment:
Q  270 atcatgaaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactcttaatcactt 849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 16894175 - 16894094
Alignment:
Q  225 aggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||| |||||||||||||||||||||       ||||| ||||| ||||||||||||||||||||| ||||    
T  16894175 aggtgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctt 16894094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 27459264 - 27459183
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||| ||||||||||| |       ||||||||||||||| || |||||||||||| ||||||    
T  27459264 ggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctt 27459183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 9689553 - 9689632
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||| |||||||||||||||||||| |||       || |||||||||||||||||||||||||||| ||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt-attatgaaaaagtcttgtggtattcaatcaagactctt 9689632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 5273276 - 5273202
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatg-aaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||||||||| |||||||||||||||||       |||||| ||||| |||||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaa 5273202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 4550570 - 4550498
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  4550570 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 4550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 14000418 - 14000346
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  14000418 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 14000346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 16894083 - 16894044
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  16894083 aaaaagtcttgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 21147092 - 21147131
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  21147092 aaaaagtcttgtggtattcaatcaagactcttaatcactt 21147131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 33656222 - 33656183
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  33656222 aaaaagtcttgtggtattcaatcaagactcttaatcactt 33656183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 37013807 - 37013879
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| ||||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 37013879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 14465497 - 14465460
Alignment:
Q  270 atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||| |||||||||    
T  14465497 atcatgaaaaagtcttgtggtattcaattaaaactctt 14465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 7016920 - 7016881
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  7016920 aaaaagtcttgtagtattcaatcaagactcttaatcactt 7016881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 307
Target Start/End: Original strand, 22746280 - 22746311
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||||||||||    
T  22746280 aaaaagtcttgtggtattcaatcaaaactctt 22746311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 27459130 - 27459091
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  27459130 aaaaagtcttgtagtattcaatcaagactcttaatcactt 27459091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 5948992 - 5949078
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaact 304  Q
    ||||||| | ||| |||||| | ||||||| ||||||||||||||       || |||||||| | |||||||||||||||||||||    
T  5948992 ttaagggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaact 5949078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 5273100 - 5273064
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    |||||||||| |||||||||||||| |||||||||||    
T  5273100 aaaaagtcttatggtattcaatcaagactcttaatca 5273064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 9220889 - 9220849
Alignment:
Q  275 gaaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||| ||||||||||| |||||| |||||||    
T  9220889 gaaaaagtcttgtgatattcaatcaagactctttatcactt 9220849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 304
Target Start/End: Complemental strand, 26795545 - 26795517
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||||||||    
T  26795545 aaaaagtcttgtggtattcaatcaaaact 26795517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 9e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 996401 - 996320
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  996401 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 996320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 3206512 - 3206431
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  3206512 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 3206431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 306
Target Start/End: Complemental strand, 12734161 - 12734076
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactct 306  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||    
T  12734161 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactct 12734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 19253721 - 19253798
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 19253798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 20498095 - 20498180
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  20498095 aggggggtgtattggatcatgattctaagggattttaaaaga-ctttttatcatgaaaaagtcttgtggtattcaatcaagactctt 20498180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 10139462 - 10139381
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||| ||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||| ||||||    
T  10139462 ggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 10139381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 37820789 - 37820712
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 37820712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 40246729 - 40246815
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||| |||||||||||||||||||||||| |||||||||| |       ||| ||||||||||||||||||||||||||| ||||||    
T  40246729 aggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctt 40246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 29029898 - 29029975
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactc 305  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||| | ||||||||||||||||| ||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactc 29029975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 35337635 - 35337706
Alignment:
Q  236 atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  35337635 atcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctt 35337706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 52114420 - 52114494
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| |||||||||||||||||| |||||||||||       ||||||| |||||||||||||||||||||||    
T  52114420 ggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa 52114494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 22057653 - 22057726
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatc 298  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||    
T  22057653 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatc 22057726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 29449176 - 29449095
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| |||||||||| |||||||||||||||||       || |||||||| ||||||||||||||||||| ||||||    
T  29449176 ggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctt 29449095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 6589455 - 6589535
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||| || ||||||    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctt 6589535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 33808118 - 33808034
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtctt---gtggtattcaatcaaaactctt 307  Q
    ||||||||| |||||||||||||||||||||||||||       ||||| ||||||||||   ||||||||||||||||| ||||    
T  33808118 ggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattctt 33808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 3206387 - 3206348
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcactt 3206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 3999827 - 3999788
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  3999827 aaaaagtcttgtggtattcaatcaagactcttaatcactt 3999788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 10139328 - 10139289
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  10139328 aaaaagtcttgtggtattcaatcaagactcttaatcactt 10139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 10660427 - 10660499
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  10660427 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 10660499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 19253851 - 19253890
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  19253851 aaaaagtcttgtggtattcaatcaagactcttaatcactt 19253890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 20498233 - 20498272
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  20498233 aaaaagtcttgtggtattcaatcaagactcttaatcactt 20498272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 29030030 - 29030069
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  29030030 aaaaagtcttgtggtattcaatcaagactcttaatcactt 29030069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 33807981 - 33807942
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  33807981 aaaaagtcttgtggtattcaatcaagactcttaatcactt 33807942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 33996723 - 33996684
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  33996723 aaaaagtcttgtggtattcaatcaagactcttaatcactt 33996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 35337759 - 35337798
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  35337759 aaaaagtcttgtggtattcaatcaagactcttaatcactt 35337798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 36674444 - 36674372
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  36674444 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 36674372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 53929310 - 53929271
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  53929310 aaaaagtcttgtggtattcaatcaagactcttaatcactt 53929271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 539695 - 539616
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||| | | ||||||| ||||||||||||       || ||||||||| |||||||||||||||||||||||||    
T  539695 tgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactctt 539616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 1440265 - 1440194
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| ||||||||||||| |||||||||| |       |||||||||||||||||||||||||||||||    
T  1440265 tgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaa 1440194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 16010748 - 16010789
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaaga 262  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  16010748 aggggggtgtattggatcataattctaagggattttaaaaga 16010789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 44762334 - 44762272
Alignment:
Q  245 ctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactctt 44762272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 6589588 - 6589624
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    ||||||||||||||||||||||||| |||||||||||    
T  6589588 aaaaagtcttgtggtattcaatcaagactcttaatca 6589624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 10728923 - 10728834
Alignment:
Q  218 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||| | |||||||||| |  |||||| || |||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  10728923 ttaagggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctt 10728834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 31646607 - 31646526
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||| | ||||||| || | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  31646607 taagggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 31646526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 33996807 - 33996771
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga 262  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33996807 ggtgtattggatcatgattctaagggattttgaaaga 33996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 51699795 - 51699714
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||||||||| |||  ||||||||||||       |||| |||||| | ||||||||||||||||| ||||||    
T  51699795 ggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactctt 51699714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 996268 - 996229
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  996268 aaaaagtcttgtggtattcaatcaagattcttaatcactt 996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 1440134 - 1440095
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  1440134 aaaaagttttgtggtattcaatcaagactcttaatcactt 1440095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 23753700 - 23753628
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | |||||||  |||||||||||||       || ||||||||||||||||||||||||||||    
T  23753700 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 23753628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 25418390 - 25418429
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  25418390 aaaaagtcttgtggtattcaatcaagacttttaatcactt 25418429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 27240557 - 27240485
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  27240557 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 27240485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 39842743 - 39842671
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||| |||||||||||||||||    
T  39842743 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaa 39842671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 51699661 - 51699622
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  51699661 aaaaaatcttgtggtattcaatcaagactcttaatcactt 51699622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 52114552 - 52114591
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  52114552 aaaaagtcttgtggtattcaatcaagacttttaatcactt 52114591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 15494045 - 15493966
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||| || |||||||||||||||||||||       || |||||||| |||||| ||||| |||||| ||||||    
T  15494045 tgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctt 15493966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 18749455 - 18749534
Alignment:
Q  221 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||| |||||||||||| | |||||||  | |||||||||||       || ||||||||||||||||||||||||||||    
T  18749455 agggcggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 18749534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 260
Target Start/End: Original strand, 52079883 - 52079917
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaa 260  Q
    |||||||||||||||||||||||| ||||||||||    
T  52079883 ggtgtattggatcatgattctaagtgattttaaaa 52079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 6131484 - 6131447
Alignment:
Q  270 atcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  6131484 atcatgaaaaagttttgtggtattcaatcaagactctt 6131447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 44906825 - 44906755
Alignment:
Q  230 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||    
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 44906755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 6131353 - 6131317
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  6131353 aaaaagttttgtggtattcaatcaagactcttaatca 6131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 304
Target Start/End: Complemental strand, 10104926 - 10104898
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||||||||    
T  10104926 aaaaagtcttgtggtattcaatcaaaact 10104898  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 304
Target Start/End: Complemental strand, 10216073 - 10216045
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaact 304  Q
    |||||||||||||||||||||||||||||    
T  10216073 aaaaagtcttgtggtattcaatcaaaact 10216045  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 51737951 - 51737915
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatca 312  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  51737951 aaaaagtcttgtggtattcaatcaagactctttatca 51737915  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 54625482 - 54625518
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga 262  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  54625482 ggtgtattggatcatgattctaagagattttagaaga 54625518  T

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Target: scaffold0113 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 39169 - 39095
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||    
T  39169 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 39095  T

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Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 39077 - 39038
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  39077 aaaaagtcttgtggtattcaataaagactcttaatcactt 39038  T

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Target: scaffold0651 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 8654 - 8727
Alignment:
Q  227 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaa 8727  T

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Target: scaffold0037 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 100102 - 100176
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||| || |||||||||||    
T  100102 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaa 100176  T

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Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 100236 - 100275
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  100236 aaaaagtcttgtggtactcaatcaagactcttaatcactt 100275  T

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Target: scaffold0400 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 15353 - 15268
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  15353 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctt 15268  T

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Target: scaffold0400; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 15215 - 15176
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  15215 aaaaagtcttgtagtattcaatcaagactcttaatcactt 15176  T

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Target: scaffold0365 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 15996 - 15911
Alignment:
Q  219 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||| ||||||    
T  15996 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctt 15911  T

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Target: scaffold0365; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 15858 - 15819
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  15858 aaaaagtcttgtagtattcaatcaagactcttaatcactt 15819  T

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Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 13806 - 13896
Alignment:
Q  217 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| | |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  13806 gttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctt 13896  T

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Target: scaffold0152 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 21521 - 21431
Alignment:
Q  217 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||| | |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||| ||||||    
T  21521 gttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctt 21431  T

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Target: scaffold0543 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 10453 - 10525
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 10525  T

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Target: scaffold0276 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 721 - 682
Alignment:
Q  276 aaaaagtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  721 aaaaagtattgtggtattcaatcaaaactcttaatcactt 682  T

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Target: scaffold0276; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 806 - 774
Alignment:
Q  275 gaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||| ||||||    
T  806 gaaaaagtcttgtggtattcaatcaagactctt 774  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 222551 - 222583
Alignment:
Q  275 gaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||||||||||    
T  222551 gaaaaagtcttgtggtattcaatcaaaactctt 222583  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 233719 - 233751
Alignment:
Q  275 gaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||| ||||||    
T  233719 gaaaaagtcttgtggtattcaatcaagactctt 233751  T

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Target: scaffold0010; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 234567 - 234599
Alignment:
Q  275 gaaaaagtcttgtggtattcaatcaaaactctt 307  Q
    |||||||||||||||||||||||||| ||||||    
T  234567 gaaaaagtcttgtggtattcaatcaagactctt 234599  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 102027 - 102063
Alignment:
Q  226 ggtgtattggatcatgattctaagggattttaaaaga 262  Q
    |||||||| ||||||||||||||||||||||||||||    
T  102027 ggtgtattagatcatgattctaagggattttaaaaga 102063  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 102124 - 102159
Alignment:
Q  280 agtcttgtggtattcaatcaaaactcttaatcactt 315  Q
    ||||||||||||||||||||| ||||||||||||||    
T  102124 agtcttgtggtattcaatcaagactcttaatcactt 102159  T

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Target: scaffold1504 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 756 - 828
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||| |||||||||||||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaa 828  T

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Target: scaffold0042 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 58348 - 58276
Alignment:
Q  228 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 300  Q
    |||||||||| | ||||| | ||||||||||||||       || ||||||||||||||||||||||||||||    
T  58348 tgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 58276  T

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