View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10061_high_9 (Length: 220)
Name: NF10061_high_9
Description: NF10061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10061_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 46502826 - 46503016
Alignment:
| Q |
17 |
agggataacaaaaactaactaactaaaaacacatgacttgagaattcaaatgacttnnnnnnnncaaagacaaatttacatatgattttgtaattttaat |
116 |
Q |
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||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
46502826 |
agggataacaaaaactagccaactaaaaacacatgacttgagaattcaaatgacttaaaaaaaacaaagacaaatttacatatgattttgtaattttaat |
46502925 |
T |
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| Q |
117 |
atatgtatgtact-atttaacatttaaggatgaaaaagactatttagccctatgttttccattggttcttacttctttgtaaggaagttac |
206 |
Q |
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| T |
46502926 |
atatgtatgtacttatttaacatttaaggatgaaaaagactatttagccctatgttttccattggttcttgcttctttgtaaggaagttac |
46503016 |
T |
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