View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10061_low_4 (Length: 447)
Name: NF10061_low_4
Description: NF10061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10061_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 6 - 423
Target Start/End: Original strand, 37851276 - 37851695
Alignment:
| Q |
6 |
gtttggtgttatggatatgatctaataataatctacttaaattggaaacagaacaaatttaattatgacctcaaaggtaactttgaattgagtatcgatc |
105 |
Q |
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| T |
37851276 |
gtttggtgttatggatatgatctaataataatctacttaaattggaaacaaaacaaatttaattatgacctcaaaggtaactttgaattgagtatcgatc |
37851375 |
T |
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| Q |
106 |
aagtggaatgtggatattaggccaatgacaaggatccaacatcagaaatacataacatgtggcaaacaacaga--gttgaacaagttaagatctatacat |
203 |
Q |
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| T |
37851376 |
aagtggaatgtggatattaggccaatgacaaggatccaacatcagaaatacataacatgtggcaaacaacagatcgttgaacaagttaagatctatacat |
37851475 |
T |
|
| Q |
204 |
atgagtggaagaccacatgtataattaatgggatacaactattgacatttgaaattaaggaaactataacaaagctaggaaggccttttgatttctcaat |
303 |
Q |
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| T |
37851476 |
atgagtggaagaccacatgtataattaatgggatacaactattggcatttgaaattaaggaaactataacaaagctaggaaggccttttgatttctcaat |
37851575 |
T |
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| Q |
304 |
gtgtggatggcgtcttccttaatatcattaacacgtcatgtaattgtgtgttttgtgtaggggtatatttctttttatccacatggagaacaaatacatg |
403 |
Q |
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| T |
37851576 |
gtgtggatggcgtcttccttaatatcattaacacgtcatgtaattgtgtgttttgtgtaggggtatatttctttttatccacatggagaacaaatacatg |
37851675 |
T |
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| Q |
404 |
caactccactttatatatat |
423 |
Q |
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| T |
37851676 |
caactccactttatatatat |
37851695 |
T |
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