View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10061_low_7 (Length: 385)
Name: NF10061_low_7
Description: NF10061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10061_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 377
Target Start/End: Complemental strand, 27125766 - 27125398
Alignment:
| Q |
7 |
aaaataagcatagacatagcaaaatgatggtctatgatctgcataacagtttttggtttgtaatgctttccgttaagtatagtggttttcattcggaaaa |
106 |
Q |
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| T |
27125766 |
aaaataagcatagacattgcaaaatgatggtctatgatctgcataacagtttttggtttgtaatgctttccgttaagtatagtggttttcattcggaaaa |
27125667 |
T |
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| Q |
107 |
ctttgaaaataatctaccaatacagtttgagcaatgtattgggtatgagacgcttttatgcaaattgaatgctgtcaaatgtgaatgaagccttctcatt |
206 |
Q |
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| T |
27125666 |
ctttgaaaataatctcccaataaagtttgagcaatgtatttggtatgagttaattttattcaaattgaatgctgtcaaatgtgaatgaagtcttctcatt |
27125567 |
T |
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| Q |
207 |
ttgggatattaggatcaaataattaaactcctaccattgatttatttatttatagtttaaaccggtttatctttgtgcgtaagtacagagaccaattcct |
306 |
Q |
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| T |
27125566 |
ttgggatattaggatcaaataattaaattcctaccattgcttta--tattttttgtttaaaccggttaatctttgtacgcaagtgcagagactaattcct |
27125469 |
T |
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| Q |
307 |
caaactgtgtaggaccgccatagataataaagctctcagaataataaacctcaaactgtgtaggaccacca |
377 |
Q |
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|||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
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| T |
27125468 |
caaactgtgtaggatcaccatagataataaagctttcagaataataaacatcaaactgtgtaggaccacca |
27125398 |
T |
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