View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10062_low_2 (Length: 306)
Name: NF10062_low_2
Description: NF10062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10062_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 36671573 - 36671859
Alignment:
| Q |
9 |
cagaacctgtgccacaccatccaccgcacacgagaaaaaatcacccaaaacccaacctgctaaacggagacattaaacacccagggaccaattctatctc |
108 |
Q |
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| T |
36671573 |
cagaacctgtaccacaccatccaccgcacacgagaaaaaatcacccaaaacccaacctgctaaacggagacattaaacacccagggaccaattctatctc |
36671672 |
T |
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| Q |
109 |
aaacttacatcaaacaattattagggtcctataacatcactcttataacaaatattgcaacattttcgacccaacaacccccatgctgtgattgaatg-- |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
36671673 |
aaacttacatcaaacaattattagggtcctataacatcactcttataacaaatattgcgacattttcgacccaacaacccccatgctgtgattgaatgta |
36671772 |
T |
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| Q |
207 |
-tatatggttagggaaatcacttttgtactattaaattagtttatttaataaagtatttgttacttcaatgtgtgtgtgcataggat |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
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| T |
36671773 |
ctatatggttagggaaatcacttttgtactattaaattagtttatttaataaaatatctgttacttcaatgtgtgtgtgcataggat |
36671859 |
T |
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