View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10064_10 (Length: 345)
Name: NF10064_10
Description: NF10064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10064_10 |
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Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 3446257 - 3445973
Alignment:
| Q |
1 |
agaacattgacatcaaatgattcaaacatatggctatacatgatccagtggcacccacaagcttcatatgtagataagttgatatgtcaattttgtaact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3446257 |
agaacattgacatcaaatgattcaaacatatggctatacatgatccagtggcacccacaagcttcatatgtagataagttgatatgtcaattttgtaact |
3446158 |
T |
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| Q |
101 |
tattatgcagttatgtttgttcccaaccatacccagaatatacaaaagcactgttcatgtcattgtgttggtaggtgggtgaacaaattatgttttgaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
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| T |
3446157 |
tattatgcagttatgtttgttcccaaccatacccagaatatacaaaagcactgttcatgtcattgtattggtaggtgggtgaacaaaatatgttttgaag |
3446058 |
T |
|
| Q |
201 |
catcaaattgatttgacatcatgggaaactatagatattctttgctggctagacacagttttaatgtcataatcacaagtgatca |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
3446057 |
catcaaattgatttgacatcatgggaaactatagatattcttcgctggctagacacagttttaatgtcataatcacaagtgatca |
3445973 |
T |
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