View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10065_high_10 (Length: 237)

Name: NF10065_high_10
Description: NF10065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10065_high_10
NF10065_high_10
[»] chr4 (44 HSPs)
chr4 (1-222)||(7662439-7662661)
chr4 (1-140)||(3129190-3129329)
chr4 (1-178)||(29552977-29553154)
chr4 (1-199)||(19115223-19115421)
chr4 (1-217)||(19648482-19648699)
chr4 (1-176)||(26694715-26694890)
chr4 (1-179)||(34976728-34976906)
chr4 (19-178)||(23872653-23872812)
chr4 (1-179)||(42779037-42779215)
chr4 (19-178)||(55299426-55299585)
chr4 (4-167)||(20675825-20675988)
chr4 (1-178)||(8935861-8936038)
chr4 (4-101)||(23641844-23641941)
chr4 (108-219)||(23279697-23279809)
chr4 (4-88)||(23647515-23647599)
chr4 (1-86)||(19733256-19733341)
chr4 (1-134)||(53486149-53486282)
chr4 (1-97)||(10562581-10562677)
chr4 (4-76)||(42952809-42952881)
chr4 (4-101)||(1827793-1827890)
chr4 (15-119)||(19162404-19162508)
chr4 (1-64)||(20396369-20396432)
chr4 (6-83)||(38296497-38296574)
chr4 (15-119)||(40688881-40688986)
chr4 (4-101)||(47419594-47419691)
chr4 (4-65)||(48312884-48312945)
chr4 (4-65)||(54482449-54482510)
chr4 (4-199)||(19756057-19756252)
chr4 (4-199)||(19783554-19783749)
chr4 (17-119)||(2072343-2072445)
chr4 (18-88)||(43516014-43516084)
chr4 (6-83)||(19308858-19308935)
chr4 (4-53)||(15741010-15741059)
chr4 (6-83)||(19837927-19838004)
chr4 (16-81)||(29328054-29328119)
chr4 (4-65)||(55724996-55725057)
chr4 (27-83)||(55464152-55464208)
chr4 (22-81)||(13841926-13841985)
chr4 (6-132)||(5893438-5893564)
chr4 (6-64)||(14538274-14538332)
chr4 (25-71)||(20509254-20509300)
chr4 (1-71)||(48805763-48805833)
chr4 (34-83)||(29133683-29133732)
chr4 (10-54)||(15648348-15648392)
[»] chr3 (49 HSPs)
chr3 (1-222)||(30166454-30166676)
chr3 (1-179)||(46907845-46908023)
chr3 (1-176)||(24925863-24926038)
chr3 (1-179)||(50545030-50545208)
chr3 (4-177)||(43120851-43121024)
chr3 (1-134)||(15480978-15481111)
chr3 (4-179)||(23819355-23819530)
chr3 (4-167)||(6175664-6175827)
chr3 (4-199)||(21739643-21739838)
chr3 (1-176)||(42674616-42674791)
chr3 (6-88)||(52907308-52907390)
chr3 (4-101)||(2365068-2365165)
chr3 (6-101)||(18381840-18381935)
chr3 (1-176)||(36709696-36709871)
chr3 (4-101)||(34332068-34332165)
chr3 (1-93)||(47538054-47538146)
chr3 (4-86)||(962431-962513)
chr3 (10-88)||(16672287-16672365)
chr3 (4-70)||(19919513-19919579)
chr3 (4-86)||(48569291-48569373)
chr3 (12-81)||(52250398-52250467)
chr3 (4-76)||(14863734-14863806)
chr3 (1-83)||(44888691-44888773)
chr3 (10-95)||(6825608-6825693)
chr3 (6-83)||(11757774-11757851)
chr3 (18-98)||(53942050-53942130)
chr3 (7-198)||(10868437-10868628)
chr3 (18-65)||(31675735-31675782)
chr3 (4-86)||(16179730-16179812)
chr3 (4-86)||(19891467-19891549)
chr3 (4-85)||(25388141-25388222)
chr3 (4-61)||(36731683-36731740)
chr3 (6-122)||(8130765-8130881)
chr3 (10-81)||(7164284-7164355)
chr3 (4-63)||(17077588-17077647)
chr3 (4-83)||(19876033-19876112)
chr3 (10-77)||(48930522-48930589)
chr3 (4-86)||(12341523-12341605)
chr3 (18-67)||(40513011-40513060)
chr3 (18-65)||(31920641-31920688)
chr3 (1-47)||(22734030-22734076)
chr3 (25-107)||(35502755-35502837)
chr3 (6-63)||(11584870-11584927)
chr3 (6-71)||(26375481-26375546)
chr3 (6-67)||(34830184-34830245)
chr3 (35-88)||(52907487-52907540)
chr3 (25-81)||(8948292-8948348)
chr3 (10-54)||(17153088-17153132)
chr3 (6-54)||(42458584-42458632)
[»] chr7 (38 HSPs)
chr7 (1-222)||(46626609-46626831)
chr7 (1-197)||(45993363-45993559)
chr7 (1-219)||(34232488-34232707)
chr7 (3-77)||(36227428-36227502)
chr7 (27-219)||(12378102-12378295)
chr7 (19-178)||(13440863-13441022)
chr7 (1-179)||(4078064-4078237)
chr7 (4-101)||(4937381-4937478)
chr7 (1-71)||(18768195-18768265)
chr7 (4-101)||(11276501-11276598)
chr7 (4-101)||(29968764-29968861)
chr7 (4-76)||(17721425-17721497)
chr7 (15-119)||(45164782-45164886)
chr7 (4-65)||(19735308-19735369)
chr7 (1-134)||(41340336-41340469)
chr7 (4-71)||(23054253-23054320)
chr7 (1-83)||(17056316-17056398)
chr7 (10-88)||(41805025-41805103)
chr7 (1-74)||(18671958-18672031)
chr7 (4-71)||(22819000-22819067)
chr7 (1-64)||(28173273-28173336)
chr7 (8-83)||(33820830-33820905)
chr7 (1-63)||(29917007-29917069)
chr7 (6-83)||(4164831-4164908)
chr7 (6-83)||(34207122-34207199)
chr7 (15-63)||(39930887-39930935)
chr7 (1-73)||(45871550-45871622)
chr7 (4-83)||(27218393-27218472)
chr7 (6-88)||(6335658-6335740)
chr7 (10-88)||(25018568-25018646)
chr7 (21-86)||(28740203-28740268)
chr7 (4-53)||(31423384-31423433)
chr7 (25-65)||(34791964-34792004)
chr7 (6-88)||(2819987-2820069)
chr7 (10-54)||(20704774-20704818)
chr7 (10-54)||(20872818-20872862)
chr7 (10-54)||(34982744-34982788)
chr7 (10-54)||(37074871-37074915)
[»] scaffold0418 (1 HSPs)
scaffold0418 (1-199)||(8391-8589)
[»] chr2 (28 HSPs)
chr2 (1-222)||(45422307-45422529)
chr2 (1-178)||(25380569-25380747)
chr2 (4-178)||(13551372-13551546)
chr2 (1-157)||(28399747-28399903)
chr2 (4-199)||(11233644-11233839)
chr2 (1-82)||(15018464-15018545)
chr2 (1-64)||(8065551-8065614)
chr2 (4-199)||(9668161-9668356)
chr2 (10-88)||(26147011-26147089)
chr2 (6-88)||(44028479-44028561)
chr2 (10-119)||(2207057-2207166)
chr2 (6-83)||(3153090-3153167)
chr2 (10-71)||(43311055-43311116)
chr2 (10-86)||(18669485-18669561)
chr2 (1-65)||(35488625-35488689)
chr2 (4-65)||(12646340-12646401)
chr2 (15-119)||(6724867-6724971)
chr2 (10-81)||(10689334-10689405)
chr2 (4-86)||(14440534-14440616)
chr2 (4-86)||(33515461-33515543)
chr2 (15-65)||(33583717-33583767)
chr2 (16-81)||(20004747-20004812)
chr2 (6-86)||(32191848-32191928)
chr2 (6-76)||(28253521-28253591)
chr2 (10-88)||(43722292-43722370)
chr2 (6-63)||(27335922-27335979)
chr2 (25-65)||(20946878-20946918)
chr2 (10-54)||(21965490-21965534)
[»] chr5 (43 HSPs)
chr5 (1-219)||(10486036-10486255)
chr5 (1-217)||(588294-588511)
chr5 (1-178)||(22094425-22094602)
chr5 (4-176)||(35121866-35122038)
chr5 (1-76)||(38358254-38358329)
chr5 (4-101)||(42514510-42514607)
chr5 (4-199)||(19506788-19506983)
chr5 (15-177)||(20207897-20208059)
chr5 (10-88)||(21084677-21084755)
chr5 (4-101)||(30731567-30731664)
chr5 (4-76)||(23239173-23239245)
chr5 (4-76)||(28534954-28535026)
chr5 (16-86)||(26261586-26261656)
chr5 (10-88)||(41590885-41590963)
chr5 (4-77)||(30509300-30509373)
chr5 (4-77)||(30549643-30549716)
chr5 (1-97)||(6050027-6050123)
chr5 (4-83)||(35983062-35983141)
chr5 (10-88)||(4297575-4297653)
chr5 (4-86)||(29572138-29572220)
chr5 (4-86)||(29573515-29573597)
chr5 (4-86)||(29574892-29574974)
chr5 (4-86)||(29576269-29576351)
chr5 (4-86)||(29577646-29577728)
chr5 (4-86)||(29579023-29579105)
chr5 (4-86)||(33170448-33170530)
chr5 (1-83)||(42260069-42260151)
chr5 (6-86)||(22174264-22174342)
chr5 (4-65)||(27796274-27796335)
chr5 (15-119)||(36256576-36256680)
chr5 (4-65)||(8299471-8299532)
chr5 (16-60)||(6885715-6885759)
chr5 (1-65)||(15861974-15862038)
chr5 (4-63)||(10780991-10781050)
chr5 (17-116)||(25856677-25856776)
chr5 (25-119)||(380712-380806)
chr5 (1-53)||(478950-479002)
chr5 (1-53)||(15829883-15829935)
chr5 (17-73)||(22438021-22438077)
chr5 (4-54)||(11266916-11266966)
chr5 (6-176)||(31865089-31865259)
chr5 (28-86)||(33385241-33385299)
chr5 (6-83)||(2682532-2682609)
[»] chr8 (41 HSPs)
chr8 (1-186)||(7453139-7453324)
chr8 (1-197)||(4987222-4987418)
chr8 (4-179)||(36157944-36158118)
chr8 (10-101)||(12332644-12332735)
chr8 (1-76)||(43612463-43612538)
chr8 (4-178)||(16375279-16375453)
chr8 (4-101)||(7925176-7925273)
chr8 (1-197)||(23942874-23943070)
chr8 (5-76)||(6901728-6901799)
chr8 (4-122)||(9923391-9923509)
chr8 (10-88)||(36493177-36493255)
chr8 (1-106)||(17659628-17659733)
chr8 (4-76)||(11393609-11393681)
chr8 (4-76)||(24794510-24794582)
chr8 (4-119)||(8300593-8300708)
chr8 (6-86)||(28453738-28453818)
chr8 (1-76)||(43611469-43611544)
chr8 (4-86)||(17700270-17700352)
chr8 (15-97)||(45255097-45255179)
chr8 (4-65)||(13878776-13878837)
chr8 (4-116)||(20825089-20825202)
chr8 (4-76)||(32267344-32267416)
chr8 (6-65)||(29721200-29721259)
chr8 (4-199)||(41664523-41664718)
chr8 (1-63)||(12135010-12135072)
chr8 (25-88)||(15539868-15539931)
chr8 (6-73)||(16839157-16839224)
chr8 (10-73)||(33070092-33070155)
chr8 (6-83)||(41691031-41691108)
chr8 (18-81)||(25193892-25193955)
chr8 (16-83)||(26774518-26774585)
chr8 (1-47)||(5585476-5585522)
chr8 (21-63)||(6245891-6245933)
chr8 (15-53)||(36025322-36025360)
chr8 (6-44)||(37165431-37165469)
chr8 (15-64)||(10530461-10530510)
chr8 (15-64)||(14345210-14345259)
chr8 (1-53)||(8445600-8445652)
chr8 (1-53)||(14490516-14490568)
chr8 (16-64)||(18187947-18187995)
chr8 (15-63)||(28992510-28992558)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-219)||(3682-3901)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-219)||(133979-134198)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-219)||(311807-312026)
[»] chr1 (31 HSPs)
chr1 (1-163)||(25504183-25504345)
chr1 (1-179)||(7395897-7396073)
chr1 (4-199)||(20796450-20796645)
chr1 (19-178)||(48072602-48072761)
chr1 (19-178)||(32352488-32352647)
chr1 (15-179)||(26721434-26721598)
chr1 (19-178)||(5497891-5498050)
chr1 (1-179)||(17708845-17709023)
chr1 (4-101)||(6051393-6051490)
chr1 (4-119)||(35541824-35541939)
chr1 (4-199)||(39431076-39431271)
chr1 (1-63)||(3074531-3074593)
chr1 (1-179)||(10710379-10710556)
chr1 (4-65)||(49264254-49264315)
chr1 (4-132)||(19042913-19043041)
chr1 (1-83)||(22191053-22191135)
chr1 (10-83)||(45271037-45271110)
chr1 (6-88)||(47622343-47622425)
chr1 (18-82)||(3544373-3544437)
chr1 (25-101)||(44890239-44890315)
chr1 (6-94)||(48434942-48435030)
chr1 (20-67)||(5809387-5809434)
chr1 (20-83)||(33259973-33260036)
chr1 (20-83)||(33280132-33280195)
chr1 (1-71)||(21409028-21409098)
chr1 (6-63)||(19014274-19014331)
chr1 (18-63)||(28358695-28358740)
chr1 (1-81)||(43943750-43943830)
chr1 (18-81)||(20987959-20988022)
chr1 (34-101)||(51052701-51052768)
chr1 (18-67)||(13867127-13867176)
[»] chr6 (36 HSPs)
chr6 (1-178)||(15674619-15674796)
chr6 (1-179)||(649248-649426)
chr6 (4-178)||(26206123-26206297)
chr6 (4-194)||(13086333-13086523)
chr6 (1-179)||(17078242-17078420)
chr6 (1-178)||(33640704-33640881)
chr6 (1-179)||(11060037-11060215)
chr6 (1-101)||(502785-502885)
chr6 (1-157)||(21549634-21549789)
chr6 (4-86)||(17605602-17605684)
chr6 (4-76)||(2554395-2554467)
chr6 (4-76)||(24766692-24766764)
chr6 (7-86)||(21629390-21629469)
chr6 (4-86)||(13938508-13938590)
chr6 (4-86)||(17576985-17577067)
chr6 (4-176)||(11469363-11469529)
chr6 (18-82)||(14843409-14843473)
chr6 (4-176)||(18681752-18681924)
chr6 (6-86)||(19616147-19616227)
chr6 (18-98)||(25351027-25351107)
chr6 (1-76)||(1104225-1104300)
chr6 (1-71)||(29056306-29056375)
chr6 (6-65)||(1307956-1308015)
chr6 (8-71)||(13563213-13563276)
chr6 (18-101)||(26514529-26514612)
chr6 (1-64)||(28575751-28575814)
chr6 (1-83)||(32186470-32186552)
chr6 (18-67)||(14686295-14686344)
chr6 (40-83)||(10362972-10363015)
chr6 (6-81)||(12673392-12673467)
chr6 (1-52)||(17230695-17230746)
chr6 (1-47)||(34372243-34372289)
chr6 (4-101)||(19350734-19350831)
chr6 (6-54)||(7217631-7217679)
chr6 (1-53)||(17980748-17980800)
chr6 (17-53)||(18589140-18589176)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-101)||(105096-105193)
[»] scaffold0179 (2 HSPs)
scaffold0179 (15-179)||(8333-8497)
scaffold0179 (15-179)||(13267-13431)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-73)||(14942-15014)
[»] scaffold0472 (1 HSPs)
scaffold0472 (4-101)||(4042-4139)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-97)||(182902-182998)
[»] scaffold0016 (1 HSPs)
scaffold0016 (10-88)||(28570-28648)
[»] scaffold0061 (1 HSPs)
scaffold0061 (10-88)||(55461-55539)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-88)||(143094-143172)
[»] scaffold0094 (1 HSPs)
scaffold0094 (19-98)||(26105-26184)
[»] scaffold0048 (1 HSPs)
scaffold0048 (6-88)||(63566-63648)
[»] scaffold1809 (1 HSPs)
scaffold1809 (16-61)||(1093-1138)
[»] scaffold1350 (1 HSPs)
scaffold1350 (4-65)||(334-395)
[»] scaffold0189 (1 HSPs)
scaffold0189 (25-86)||(6902-6963)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-54)||(224009-224057)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7662661 - 7662439
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7662661 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 7662562  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7662561 gtcctccaaaggaaagaaaccggctattccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggattaccccc 7662462  T
Q  200 aacaggcaagcccaagtacataa 222  Q
    || ||||||||||||||||||||    
T  7662461 aataggcaagcccaagtacataa 7662439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3129329 - 3129190
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| ||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  3129329 aataaagagtcaagggaagaaagcatacctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaac 3129230  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaag 140  Q
    | |||| ||||||||||||||||| ||||||||| |||||    
T  3129229 gacctccaaaggaaagaaatcggcaattccaacccgtaag 3129190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 29553154 - 29552977
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||| ||| |  ||||||||||    
T  29553154 aataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaagaaccaaac 29553055  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || | ||| ||||| || |  ||||||||||| |  ||||||| | |||| |||| ||||||||||||||||||||    
T  29553054 gaccaccaaaagaaaggaaacaactattccaacccgacagtctagttctaatacgattcacaataggatcccaaaaac 29552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19115223 - 19115421
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||| ||| |  |||||||| |    
T  19115223 aataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagacagagaagtcaagacagctttgagaagaaccaagc 19115322  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | || | ||| || || || || ||||||||||| |  |||| ||||||||  |||| ||||||||||||||| ||||  | |||||| ||||||||||    
T  19115323 ggccaccaaaagagaggaaacgactattccaacccgacagtcgagctttaacacgattcacaataggatcccagaaacacaaacgacgaggattacccc 19115421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19648482 - 19648699
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |  ||||||||||    
T  19648482 aataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaac 19648581  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacc-cc 199  Q
    | ||   ||| || || || || |||||||||||||  | ||||| ||| || |||| ||||| ||| ||||| ||||  | |||||| |||||||| ||    
T  19648582 ggccagcaaaagagaggaaacgactattccaacctgacactctagattttatacgattcacaacagggtcccagaaacacaaacgacgaggattaccacc 19648681  T
Q  200 aacaggcaagcccaagta 217  Q
    ||  |||| |||||||||    
T  19648682 aatcggcatgcccaagta 19648699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26694715 - 26694890
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||  || ||||| |  |||| ||| |    
T  26694715 aataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagggcatagacaggcagagatgtcagaactgatttgaggagaatcaagc 26694814  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | || | ||| || |||||||  ||||||||||| || ||||||| |||||| |||| ||| || || ||||||||    
T  26694815 ggccaccaaaagagagaaatctactattccaacccgtcagtctagatttaatgcgattcacgatcggttcccaaaa 26694890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 34976728 - 34976906
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||| ||||||||||    
T  34976728 aataaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaaac 34976827  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | |||  | ||||||||||| |  |  |||||||| || |||  ||||||||| |||||||||||    
T  34976828 ggccgccaaaagataaaaaatgactattccaaccagacaacctagcttttatgcgactcacaataggttcccaaaaact 34976906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 23872812 - 23872653
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || || | ||| || ||||    
T  23872812 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 23872713  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  23872712 accgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 23872653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 42779037 - 42779215
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||| ||||| ||||| || |||| ||||| ||    
T  42779037 aataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagacttcaacaaaaccagac 42779136  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || ||||| || |||||||| || |  |  ||||||||||| |||| ||||| ||| |||||||||||    
T  42779137 ggccgccaaaagatagaaaacgactattccacccagacaacctagctttaatgcgattcacaaaaggttcccaaaaact 42779215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 55299426 - 55299585
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || || | ||| || ||||    
T  55299426 gagattatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 55299525  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  | ||||| |||||| |||| ||||||||| ||||| ||||    
T  55299526 accgactattccaacccgacaatctagatttaatacgattcacaataggttcccagaaac 55299585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 20675825 - 20675988
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||  || ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || |    
T  20675825 aaagattcaatagaggagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgac 20675924  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaatagg 167  Q
    | | ||| || | ||| || ||||| ||||| |  ||||||| |||||| |||| |||||||||    
T  20675925 caccaaaagagaaaaaccgactattacaacccgacagtctagatttaatacgattcacaatagg 20675988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 8935861 - 8936038
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||| |||||| || ||||||||||||||| |||||||||||||| ||||| ||||||||||  ||||| ||||| |||||||| |  ||||||||||    
T  8935861 aataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaaccaaac 8935960  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | |  | ||| || || || || |||||||||||||  ||||||| ||| || |||| ||||| ||| ||||| ||||    
T  8935961 ggcaaccaaaagagaggaaacgactattccaacctgacagtctagtttttatacgattcacaacagggtcccagaaac 8936038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 23641941 - 23641844
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  23641941 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 23641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 23279697 - 23279809
Alignment:
Q  108 aaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc-aacaggc 206  Q
    |||||| ||||| ||| |||||||||  |||||||||| ||||||||||| || |||||| ||  |||||||||||||||| |||||||||| || ||||    
T  23279697 aaaggagagaaaccggttattccaactcgtaagtctagttttaattcgattcaaaatagggtcataaaaactaagacgacgtggattacccctaataggc 23279796  T
Q  207 aagcccaagtaca 219  Q
    |||||||||||||    
T  23279797 aagcccaagtaca 23279809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 23647599 - 23647515
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||    
T  23647599 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagacttta 23647515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19733341 - 19733256
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||||||| || | ||||| |||||||||    
T  19733341 aataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagattt 19733256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 53486282 - 53486149
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| ||||   |||||||||| ||||| ||||  ||||| ||||||| ||||| ||    
T  53486282 aataaagaatcaatggaagagattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactttaacaaaaccagac 53486183  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacc 134  Q
    | || | ||| || ||||| || |||||||||||    
T  53486182 ggccgccaaaagatagaaaacgactattccaacc 53486149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10562677 - 10562581
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaacca 97  Q
    |||||||| | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||| ||||  ||||| ||||| |||||||    
T  10562677 aataaagaattaaaggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaacca 10562581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 42952881 - 42952809
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||||    
T  42952881 aaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtca 42952809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 1827890 - 1827793
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||| ||||| ||| || ||||  |||| ||||||    
T  1827890 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaagaatcaaacg 1827793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 19162508 - 19162404
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||||||||| |||||| |||||| |||||||| ||||| |||||||||||||| |  ||||||||| | ||||| |||| ||| || |||| |||||||    
T  19162508 ggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagcgacctccaaaggaa 19162409  T
Q  115 agaaa 119  Q
    |||||    
T  19162408 agaaa 19162404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20396369 - 20396432
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    |||||||| | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  20396369 aataaagaattaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 38296497 - 38296574
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||| | ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||| |||||    
T  38296497 agattcaatggaaaaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaaaacaga 38296574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 40688881 - 40688986
Alignment:
Q  15 ggaagagattatacctgatggagc-tttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaagga 113  Q
    |||||||||| |||||| |||||| ||||||||| ||||| |||||||||| ||| | |||||||||||| ||||| |||| ||| || |||| ||| ||    
T  40688881 ggaagagattgtacctgctggagcctttgaagaaggaaagagcatagacagatagcgcagtcaagacagactttaaaagaatcaagcgacctccaaaaga 40688980  T
Q  114 aagaaa 119  Q
    ||||||    
T  40688981 aagaaa 40688986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 47419594 - 47419691
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| || || ||||||||||| |||| ||||| ||| || ||||  |||| ||||||    
T  47419594 aaagattcaatggaagagattatacctgtcggagctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtagaatcaaacg 47419691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 48312884 - 48312945
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  48312884 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 48312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 54482510 - 54482449
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  54482510 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 19756057 - 19756252
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||  ||| |||||| || ||||| |||||||||||||| | ||||| ||| || ||||  |||| |||||| |    
T  19756057 aaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgac 19756156  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || ||||| || || || | |||||| |  | ||||| |||||| |||| ||||| ||| ||||||||   ||||| |||||||| |||||    
T  19756157 caccgaaagaaaggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaacaaaagacaacgcggatcacccc 19756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 19783749 - 19783554
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||  ||| |||||| || ||||| |||||||||||||| | ||||| ||| || ||||  |||| |||||| |    
T  19783749 aaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgac 19783650  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || ||||| || || || | |||||| |  | ||||| |||||| |||| ||||| ||| ||||||||   ||||| |||||||| |||||    
T  19783649 caccgaaagaaaggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaacaaaagacaacgcggatcacccc 19783554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 2072343 - 2072445
Alignment:
Q  17 aagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaag 116  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||| | ||||| |||| |||| |||| |  |||||||| || ||||  ||||| ||    
T  2072343 aagagattatatctgacggagctttgaagaaagaaagagcatagacatgcagagaggtcatgacaaatttgagaagaaccaaccggcctccgaaggagag 2072442  T
Q  117 aaa 119  Q
    |||    
T  2072443 aaa 2072445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 43516084 - 43516014
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||  | ||||| |||||| ||||    
T  43516084 agagattatacctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttta 43516014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 19308935 - 19308858
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||||||||||||||||  |||||| |||| ||||||||||| |||||||| || |||| || ||||||    
T  19308935 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacaga 19308858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 15741010 - 15741059
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||| |||||||||||||||||| ||||||||||| || |||||    
T  15741010 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 15741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 19837927 - 19838004
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| || ||||||||||||||  |||||| |||| ||||||||||| |||||||| || |||| || ||||||    
T  19837927 agattcaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacaga 19838004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 29328119 - 29328054
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    ||||| ||||||| || |||||| |||||||| |||||  |||||||||||||||| |||||||||    
T  29328119 gaagaaattatacttgttggagccttgaagaaggaaagaccatagacaggtagagaggtcaagaca 29328054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 55725057 - 55724996
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| ||||||||||||||| || ||||||||||| || |||||  ||||||||||    
T  55725057 aaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacatagacagg 55724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 55464208 - 55464152
Alignment:
Q  27 acctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||| ||||||||||||| ||||| ||||||||| | ||||||||||| |||||    
T  55464208 acctgattgagctttgaagaaggaaagagcatagacatgcagagaagtcaatacaga 55464152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 13841926 - 13841985
Alignment:
Q  22 attatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    ||||||||||| ||||||||||||||||||| | | |||| ||| ||||||| |||||||    
T  13841926 attatacctgagggagctttgaagaaagaaatgacgtagataggcagagaagacaagaca 13841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 5893564 - 5893438
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcct 105  Q
    ||||||||| ||||||||||||| ||| ||| |||||||||| ||| |  ||| |||| | || ||||| | |||| ||||||  |||| |||||| ||     
T  5893564 agattcaagagaagagattatacttgacggaactttgaagaaggaacgaacatggacaaggagtgaagttaggacaaattttagaagaatcaaacgacca 5893465  T
Q  106 ctaaaggaaagaaatcggctattccaa 132  Q
    |||||  ||||||| || |||||||||    
T  5893464 ctaaaataaagaaagcgactattccaa 5893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 14538274 - 14538332
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    |||||||| |||| ||||||||||||  |||||| |||| ||||||||||| |||||||    
T  14538274 agattcaatggaatagattatacctgcgggagctctgaaaaaagaaagggcgtagacag 14538332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 20509300 - 20509254
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  20509300 atacctgacggagccttgaagaaagaaagggcataaacaggcagaga 20509254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48805763 - 48805833
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||||||||||||| | | |||||| ||||||| ||||||||||| ||||| ||| | ||||| |||||    
T  48805763 aataaagattcaagggcataaattatatctgatggggctttgaagaaggaaagagcacacacaggaagaga 48805833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 29133683 - 29133732
Alignment:
Q  34 ggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||||||||| ||||| ||||||||||  ||||| |||||||||||    
T  29133683 ggagctttgaagaaggaaagagcatagacagagagagaggtcaagacaga 29133732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15648392 - 15648348
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||    
T  15648392 tcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 15648348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30166676 - 30166454
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30166676 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 30166577  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcgga-ttacccc 199  Q
    |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||    
T  30166576 gtcctccaaaggaaagaaaccggctattccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggatttccccc 30166477  T
Q  200 aacaggcaagcccaagtacataa 222  Q
    || ||||||||||||||||||||    
T  30166476 aataggcaagcccaagtacataa 30166454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 46908023 - 46907845
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||| ||| ||||| ||||  ||||| ||||| ||||||||||    
T  46908023 aataaagattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaaccaaac 46907924  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||||||| ||||||| ||||||||||| |  |||||||||||||| |||| || ||||||||||||||||||    
T  46907923 ggccgcaaaaggaatgaaatcgactattccaaccagacagtctagctttaatacgattcaaaataggatcccaaaaact 46907845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 24926038 - 24925863
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| |  || | ||| |    
T  24926038 aataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtcaaaaccgatttaaggaggatcaagc 24925939  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | || | ||| || ||||| ||  |||||||||| |  ||||||| ||| || |||| ||||||||||||||||||    
T  24925938 gaccgccaaaagagagaaaccgtttattccaacccgacagtctagattttatacgattcacaataggatcccaaaa 24925863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 50545030 - 50545208
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| ||||  |||||||| |||||||| |||| |||||| ||||| ||||||| ||    
T  50545030 aataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaaccagac 50545129  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | ||| || ||||||||||  |  |  |||||||| || |||  |||||||||||||||||||||    
T  50545130 ggccgccaaaagataaaaaacgactattccaactagacaacctagcttttatgcgagacacaataggatcccaaaaact 50545208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 43121024 - 43120851
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||  ||||||||||  ||||| |||| |||||||||||| |||||||  || |    
T  43121024 aaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacagacagagaggtcaggacagattttaaaagaaccaggcgac 43120925  T
Q  104 ctctaaagga-aagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaa 177  Q
    | | ||| || |||||| || ||||||||||| |  ||||||  ||||||  ||| |||||||||||||||||||    
T  43120924 cgccaaaagataagaaa-cgactattccaaccagacagtctaaatttaatctgattcacaataggatcccaaaaa 43120851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 15481111 - 15480978
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||  |||| ||| |  || | |||||    
T  15481111 aataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagacaagcagagatgtcagaacagctttgaggaggatcaaac 15481012  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacc 134  Q
    | || | ||| ||||||||||  |||||||||||    
T  15481011 ggccaccaaaagaaagaaatctactattccaacc 15480978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 23819355 - 23819530
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| ||||| |||||||  || |    
T  23819355 aaagattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactttaagagaaccatgcgac 23819454  T
Q  104 ctctaaagga-aagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | | ||| || |||||| || ||||||||||| |  |  ||| ||||||| |||| ||||||| |||||||||||||    
T  23819455 caccaaaagataagaaa-cgactattccaaccagacaacctaactttaatccgattcacaataagatcccaaaaact 23819530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 6175827 - 6175664
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||  || ||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || |    
T  6175827 aaagattcaatagaggagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaagcgac 6175728  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaatagg 167  Q
    | | ||| || ||||| || ||||||||||| |  ||||||| ||||||  ||| |||||||||    
T  6175727 caccaaaagagagaaaccgactattccaacccgacagtctagatttaatatgattcacaatagg 6175664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 21739838 - 21739643
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| | |||||||   || | ||| || || ||||| || |    
T  21739838 aaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcggaactgctttcaaaaggaccaagcgac 21739739  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || ||||| ||||||||||||||||  ||||||| ||||||||  | ||||| ||| ||||||||    |||||||||||||||||||    
T  21739738 caccgaacgatagaaaccggctattccaacctgacagtctagatttaattctgttcacaacagggtcccaaaacgacagacgacgcggattacccc 21739643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 42674791 - 42674616
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||| ||||  || ||||| |  |||| ||| |    
T  42674791 aataaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgatttgaggagaatcaagc 42674692  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | || | ||| || |||||||  ||||||||||  || ||||||| |||||| |||| ||| || || ||||||||    
T  42674691 ggccaccaaaagagagaaatctactattccaactcgtcagtctagatttaatgcgattcacgatcggttcccaaaa 42674616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 52907390 - 52907308
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||| ||||    
T  52907390 agattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacaggtagagaagacatgacagacttta 52907308  T

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Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 2365068 - 2365165
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  2365068 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 2365165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 18381840 - 18381935
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||||  ||||||||||||||||| ||||||||| |||| | || |||||||||    
T  18381840 agattcaatggaagatattatacctgatggagctttgaaaaaggaaatagcatagacaggtagagatgtcaagacatatttgatcaaaaccaaacg 18381935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 36709696 - 36709871
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||| || |  || ||||| |  || | |||||    
T  36709696 aataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacaggcagagatgttagaactgatttgaggaggatcaaac 36709795  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | || |  || ||||||||||  ||||||||||| |  ||||||| |||||| |||| ||| || || ||||||||    
T  36709796 ggccaccgaaagaaagaaatctactattccaacccgacagtctagatttaatgcgattcacgattggttcccaaaa 36709871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 34332165 - 34332068
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||| |||||||| || || ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  34332165 aaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtagaatcaaacg 34332068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47538054 - 47538146
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacaga 93  Q
    |||||||| ||||  |||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||| |||| |||||  |||||||||    
T  47538054 aataaagaatcaatagaagagattatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacaggctttaacaga 47538146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 962513 - 962431
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||||||| || | ||||| |||||||||    
T  962513 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagattt 962431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16672365 - 16672287
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||||  |||||||||||||||| ||||||||||| ||||    
T  16672365 tcaagggaagaaattatacctgacggagccttgaagaaggaaagaacatagacaggtagagaggtcaagacagacttta 16672287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 19919579 - 19919513
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagag 70  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  19919579 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagag 19919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 48569373 - 48569291
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| || | ||||| ||| |||||    
T  48569373 aaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggattt 48569291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 52250467 - 52250398
Alignment:
Q  12 aagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    ||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||||||    
T  52250467 aagggaagaaattatacctgacggagccttgaagaaggaaagcgcatagacaggtagagaggtcaagaca 52250398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 14863806 - 14863734
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||||| | ||||||||    
T  14863806 aaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacaggcaaagaagtca 14863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44888691 - 44888773
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||  ||||||||||| ||||| | |||||||||    
T  44888691 aataaagattcaagggttgagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacaga 44888773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 6825608 - 6825693
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaac 95  Q
    ||||||||||| ||||||| ||| ||||| |||||||| ||||| ||||||||||||||| | |||||||| || ||||| |||||    
T  6825608 tcaagggaagaaattatacttgacggagccttgaagaaggaaagagcatagacaggtagaaaggtcaagacggactttaagagaac 6825693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 11757851 - 11757774
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||| ||||||||||||||||| |||||||| || ||||||||||| ||||||||| | ||||  |||||||||||    
T  11757851 agattctagggaagagattataccagatggagcctttaagaaagaaagagcatagacaagaagagcggtcaagacaga 11757774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 53942050 - 53942130
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaa 98  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||| | || || ||||||||||| ||||| || |||||    
T  53942050 agagattatacctgacggagctttgaagaaggaaagagcatagacaagaagcgaggtcaagacagactttaaaaggaccaa 53942130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 10868437 - 10868628
Alignment:
Q  7 gattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctc 106  Q
    ||||||| ||||||||||||||||||| ||||||| ||||| ||||| ||||| ||||| | ||| ||||  || | ||| |  || ||||| || || |    
T  10868437 gattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacaggcaaagatgtcagaactgctttcataaggaccaagcgaccac 10868536  T
Q  107 taaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattaccc 198  Q
     ||| || ||||| |||||||||||||| |  | ||||| |||||||| || ||||| ||  ||||||||   |||||| ||||||||||||    
T  10868537 caaacgagagaaaccggctattccaacccgacattctagatttaattctattcacaacagagtcccaaaatgaaagacggcgcggattaccc 10868628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 31675735 - 31675782
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31675735 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 31675782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 16179730 - 16179812
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| ||||||||||||||||||  |||||||||| || ||||| ||||||||||| || | | ||| |||||||||    
T  16179730 aaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacaggaagtgcaatcaggacagattt 16179812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 19891467 - 19891549
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||| ||||||||||| ||||||||||| || |||||  |||| ||||| || | |||||||||||||||    
T  19891467 aaagattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagattt 19891549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25388222 - 25388141
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatt 85  Q
    ||||||| || |||||||||||||||| |  ||||||||||||||||||| ||||||||| | ||||| ||||  |||||||    
T  25388222 aaagatttaatggaagagattatacctaaaagagctttgaagaaagaaagagcatagacaaggagagaggtcagaacagatt 25388141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 36731683 - 36731740
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcataga 61  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||    
T  36731683 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcataga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 8130765 - 8130881
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcct 105  Q
    |||||| | |||||||||| |||||| |||||| |||||||| ||||| |||||||| ||| | |  ||||||||||| ||||  |||| ||| || |||    
T  8130765 agattctatggaagagattctacctgctggagccttgaagaaggaaagagcatagaccggttgcgcggtcaagacagactttagaagaatcaagcgacct 8130864  T
Q  106 ctaaaggaaagaaatcg 122  Q
    | ||| |||||||||||    
T  8130865 ccaaatgaaagaaatcg 8130881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 7164284 - 7164355
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    ||||||||||| |||||||||||||||||  ||||||| ||||| ||||| | ||| ||||| |||||||||    
T  7164284 tcaagggaagaaattatacctgatggagccctgaagaaggaaagagcataaataggaagagaggtcaagaca 7164355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17077647 - 17077588
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||| ||||||||||||||||||  |||||||||| || ||||| |||||||||    
T  17077647 aaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 19876033 - 19876112
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  19876033 aaagattcaatgagagaaattatacctgacggagatttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 19876112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 48930522 - 48930589
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaa 77  Q
    ||||||||||| ||||||||||| ||||| |||||||| | ||| ||||||||||| ||||| |||||    
T  48930522 tcaagggaagaaattatacctgacggagccttgaagaaggtaagagcatagacaggaagagaggtcaa 48930589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 12341605 - 12341523
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||  |||||||||||||| || |||||||| || || ||||| | ||||||||| || | |||||||||||||||    
T  12341605 aaagattcaatagaagagattatacccgacggagctttaaaaaaggaaagtgtatagacaggaagcgcagtcaagacagattt 12341523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 40513060 - 40513011
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggta 67  Q
    ||||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  40513060 agagattatacctgacggagccttgaagaaggaaagagcatagacaggta 40513011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 31920688 - 31920641
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||| ||| | |||||||||||| |||||||||||||||||    
T  31920688 agagattatacttgacgaagctttgaagaaggaaagggcatagacagg 31920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22734076 - 22734030
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaa 47  Q
    |||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  22734076 aatatagattcaatggaagagattatacatgatggagccttgaagaa 22734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 35502837 - 35502755
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctct 107  Q
    ||||||||  |||| ||||||||||||||||| || ||| | ||||| | || |||||| |||||||||||||| || |||||    
T  35502837 atacctgaatgagccttgaagaaagaaagggcgtaaacaagcagagatgacaggacagactttaacagaaccaagcgacctct 35502755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 11584870 - 11584927
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||| ||| |||||||||||||  ||||||||||| |||||||| || ||||||    
T  11584870 agattcaatggaggagattatacctgcgggagctttgaaaaaagaaagagcgtagaca 11584927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 26375546 - 26375481
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||||| ||| || ||||||||||  |||||| |||| |||||||||||||| ||||| |||||    
T  26375546 agattcaatggaggaaattatacctgcgggagctctgaaaaaagaaagggcataaacaggcagaga 26375481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 34830184 - 34830245
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggta 67  Q
    |||||||| || ||||||||||||||| |||||   |||||| ||||| |||||||||||||    
T  34830184 agattcaatggcagagattatacctgacggagccaggaagaaggaaagagcatagacaggta 34830245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 52907540 - 52907487
Alignment:
Q  35 gagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||||| |||| |||||| ||||||||||||| || |||||| ||||    
T  52907540 gagctttgaagaaggaaatggcatatacaggtagagaagacatgacagacttta 52907487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 8948348 - 8948292
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||||| |||||||||||||| ||||  ||||||||||| ||||| |||| ||||    
T  8948348 atacctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggaca 8948292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17153132 - 17153088
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||    
T  17153132 tcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 17153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 42458632 - 42458584
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||||||| ||| || ||| |||| |||||||||||||||||||||    
T  42458632 agattcaagggtagaaataataactgagggagctttgaagaaagaaagg 42458584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 46626609 - 46626831
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46626609 aataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 46626708  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  46626709 gtcctccaaaggaaagaaaccggctattccaacccgtaagtctagctttaattcgatgcacaataggatcccaaaaactatgacgatgcggattaccccc 46626808  T
Q  200 aacaggcaagcccaagtacataa 222  Q
    || || ||| |||||||||||||    
T  46626809 aatagacaaacccaagtacataa 46626831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 45993363 - 45993559
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  ||||||||||    
T  45993363 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaac 45993462  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacc 197  Q
    | || | ||| || || || || |||||||||||||  |||||||  || || |||| ||||| ||| ||||| ||||  | |||||| ||||||||    
T  45993463 gaccaccaaaagagaggaaacgactattccaacctgacagtctagactttatacgattcacaacagggtcccagaaacacaaacgacgaggattacc 45993559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 34232488 - 34232707
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||| ||||  ||||| ||||||||||||| ||    
T  34232488 aataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactttaacagaaccagac 34232587  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcgga-ttacccc 199  Q
    | || | ||| || | ||| || ||||||||||| |  |  |||||||| || |||| ||||| ||| ||||||||||| | ||| || ||| || ||||    
T  34232588 ggccaccaaaagataaaaaacgactattccaaccagacaacctagcttttatacgattcacaaaaggttcccaaaaactcaaacgccgaggatttccccc 34232687  T
Q  200 aacaggcaagcccaagtaca 219  Q
    || |||||||||||||||||    
T  34232688 aataggcaagcccaagtaca 34232707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 36227502 - 36227428
Alignment:
Q  3 taaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaa 77  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36227502 taaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaa 36227428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 12378295 - 12378102
Alignment:
Q  27 acctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaaatcggcta 126  Q
    |||||||| |||||||||||||||||| |||| || ||| | ||||||||||||||||||||  || |||||  |||| | |||||| | ||| || |||    
T  12378295 acctgatgaagctttgaagaaagaaagagcattgataggcaaagaagtcaagacagattttagaagtaccaagtgtccgccaaaggagataaaccgacta 12378196  T
Q  127 ttccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-ccccaacaggcaagcccaagtaca 219  Q
    ||| |||  |||  |||||||| |||||||| ||||||||| |||||||||||||||||| || ||||| |||||| ||| ||||| |||||||    
T  12378195 ttcaaactcgtacttctagcttcaattcgattcacaatagggtcccaaaaactaagacgatgcagattacccccaatagggaagcctaagtaca 12378102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 13440863 - 13441022
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||||||||| |||| |  |||||||| || || | | | || ||||    
T  13440863 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaa 13440962  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  13440963 accgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 13441022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 4078064 - 4078237
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||     | |||||||||||| |||| || ||    
T  4078064 aataaagattcaaaagaagagattatacctgatggagctctgaagaaggaaagcgcatagacaggcagag-----aggacagattttaaaagaatcagac 4078158  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | ||| || ||||||||||| |  |  || |||||||| |||| |||||||||||||||||||||    
T  4078159 ggccgccaaaagataaaaaacgactattccaaccagacaacctggctttaatgcgattcacaataggatcccaaaaact 4078237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 4937478 - 4937381
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  4937478 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 4937381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18768195 - 18768265
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||    
T  18768195 aataaagattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacaggcagaga 18768265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 11276598 - 11276501
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||| || ||||  |||| ||||||    
T  11276598 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttaggagaatcaaacg 11276501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29968764 - 29968861
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||| || ||||  |||| ||||||    
T  29968764 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagagcagtcaggacggactttagaagaatcaaacg 29968861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 17721425 - 17721497
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  17721425 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 17721497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 45164886 - 45164782
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||||||||| |||||| |||||| |||||||| ||||| |||||||||||||| |  ||||||||||| ||||| |||| ||| || |||| |||||||    
T  45164886 ggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaggaa 45164787  T
Q  115 agaaa 119  Q
    |||||    
T  45164786 agaaa 45164782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 19735308 - 19735369
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  19735308 aaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 19735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41340336 - 41340469
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| |||||||||||||||| | | |||||||||||| |||||||||||||||   ||||||||||  || ||||| |  || | ||| |    
T  41340336 aataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagacatacagagaagtcagaaccgatttaaggaggatcaagc 41340435  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacc 134  Q
    | || | |||||| |||||||||||||| |||||    
T  41340436 gaccaccaaaggagagaaatcggctatttcaacc 41340469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 23054320 - 23054253
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||||||| ||||||||||||||||||  ||||||| ||||| ||||| |||||||||||||||||    
T  23054320 aaagattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacaggtagaga 23054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17056316 - 17056398
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||  ||||||||||| ||||| | |||||||||    
T  17056316 aataaagattcaagggttgagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacaga 17056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41805103 - 41805025
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| | ||| |||||||| || || ||||||||||||||||| ||||||||||| ||||    
T  41805103 tcaagggaagaaattatacctgacgaagccttgaagaaggagagagcatagacaggtagagaggtcaagacagacttta 41805025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18671958 - 18672031
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagt 74  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| |||||  |||||||||  ||||||||    
T  18671958 aataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacagacagagaagt 18672031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22819067 - 22819000
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    ||||||||||||| ||| | |||||||||||||||| ||||||| ||||| ||||||||||| |||||    
T  22819067 aaagattcaagggtagaaagtatacctgatggagctctgaagaaggaaagtgcatagacaggaagaga 22819000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28173336 - 28173273
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    ||||||||||||| ||||||||| ||| |||| ||||||||||||||| |||| ||||||||||    
T  28173336 aataaagattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacag 28173273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 33820905 - 33820830
Alignment:
Q  8 attcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||  |||||| ||| ||||| |||| ||||||    
T  33820905 attcaatggaagagataatacctgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacaga 33820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29917007 - 29917069
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||||||  ||||||||| ||||||| |||||||||||||| ||||| |||||||||    
T  29917007 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 4164831 - 4164908
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||||||||||||||||  |||||| |||| ||||||||||| |||||||| || |||| || ||||||    
T  4164831 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcgaagacaggacaga 4164908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 34207122 - 34207199
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||||||||||||||||  |||||| |||| ||||||||||| |||||||| || |||| || ||||||    
T  34207122 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcgaagacaggacaga 34207199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 39930935 - 39930887
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  39930935 ggaagagattatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45871550 - 45871622
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaag 73  Q
    |||| ||||||||  ||||| || |||||||| |||||||||||||| ||||| ||||| |||||||||||||    
T  45871550 aatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacaggtagagaag 45871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 27218472 - 27218393
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||||| |  ||| ||||||||||| ||||| |||||||| ||||| ||||||||| | || ||||||||||||||    
T  27218472 aaagattcaatgagagaaattatacctgacggagccttgaagaaggaaagtgcatagacatgaagcgaagtcaagacaga 27218393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 6335740 - 6335658
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||||| | |||||||||| ||| || |||||| |||||||| ||||| |||||||||||||  | |||||||||||| ||||    
T  6335740 agattctatggaagagattgtacatgctggagccttgaagaaggaaagagcatagacaggtaacgcagtcaagacagacttta 6335658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 25018646 - 25018568
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| | ||| |||||||| |||||  |||||| ||||| ||| ||||||||||| ||||    
T  25018646 tcaagggaagaaattatacctgacgaagccttgaagaaggaaagaacatagataggtaaagaggtcaagacagacttta 25018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 28740268 - 28740203
Alignment:
Q  21 gattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| | |||||||||||||| ||||| ||||| ||||| ||||||| || |||||||||    
T  28740268 gattatacctaagggagctttgaagaaggaaagagcataaacaggcagagaagacatgacagattt 28740203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 31423384 - 31423433
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||| |||||||||||||||||| ||||||||||| || |||||    
T  31423384 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 31423433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 34792004 - 34791964
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  34792004 atacctgagggagctttgaagaaggaaagggcatagacagg 34791964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 2820069 - 2819987
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||  ||||||||||||||||| || ||||||||||| |||||  ||||||||   |  |||| ||||||||||||||    
T  2820069 agattcaatagaagagattatacctgacggggctttgaagaaggaaagaacatagacaaacaaggaagacaagacagatttta 2819987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20704818 - 20704774
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||| ||||| || |||||||| |||||||||||||||||||||    
T  20704818 tcaagagaagaaataatacctgagggagctttgaagaaagaaagg 20704774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20872862 - 20872818
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||| ||||| || |||||||| |||||||||||||||||||||    
T  20872862 tcaagagaagaaataatacctgagggagctttgaagaaagaaagg 20872818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34982744 - 34982788
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||    
T  34982744 tcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 34982788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37074915 - 37074871
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||    
T  37074915 tcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 37074871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8391 - 8589
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8391 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 8490  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8491 gtcctccaaaggaaagaaaccggctattccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggattacccc 8589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 45422307 - 45422529
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45422307 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaatagaaccaaac 45422406  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  45422407 gtcctccaaaggaaagaaaccggctattccaacccataagtctagctttaatacgattcacaataggatcccaaaaactaagacgacgcggattaccccc 45422506  T
Q  200 aacaggcaagcccaagtacataa 222  Q
    || |||| |||||||||||||||    
T  45422507 aataggctagcccaagtacataa 45422529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 25380747 - 25380569
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||| |  |||||||| |    
T  25380747 aataaagattcaatagaagagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaagaaccaagc 25380648  T
Q  101 gtcc-tctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | ||  | ||| || ||||| || ||| |||||| ||  ||||||| |||||| |||| ||||||||| ||||||||||    
T  25380647 ggccgccaaaaagagagaaaacgactaatccaacttgacagtctagatttaatacgattcacaataggttcccaaaaac 25380569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 13551372 - 13551546
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||  || ||||||||||||||||||||||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || |    
T  13551372 aaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgac 13551471  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | | ||| || ||||| || |||||||||||||  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  13551472 caccaaaagatagaaaccgactattccaacctgacagtctagatttaatacgattcacaataggttcccagaaac 13551546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28399903 - 28399747
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||  || |||||||  |||| |||||    
T  28399903 aataaagattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagaatcaaac 28399804  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgat 157  Q
    |||| | ||| || ||||| |  |||| |||||| |  ||||||| |||||| ||||    
T  28399803 gtccaccaaaagagagaaacctactatgccaacccgacagtctagatttaatgcgat 28399747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 11233839 - 11233644
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||| |||||||||||||||||| ||||| ||||| ||||| ||||| | ||||||||  || | ||| || || ||||| || |    
T  11233839 aaagattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgac 11233740  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || ||||| ||| ||||||||||||  ||||||| |||||||| || ||||| ||| ||||||||   ||||||||||||||| ||||    
T  11233739 caccgaacgagagaaaccggttattccaacctgacagtctagatttaattctattcacaacagggtcccaaaacgaaagacgacgcggattgcccc 11233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15018464 - 15018545
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacag 82  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||| ||||| |||||||||||  |||||||||||||||    
T  15018464 aataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtcaagacag 15018545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8065614 - 8065551
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  8065614 aataaagattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 9668356 - 9668161
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||| || || ||||||||||  |  |||||||  || | ||| || || ||||| || |    
T  9668356 aaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacagacaacgaagtcagaactgctttcaaaaggaccaagcgac 9668257  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || ||||| ||| ||||||||||||  | ||||| |||||||| || ||||| ||| ||||||||   ||||||||||||||||||||    
T  9668256 caccgaacgagagaaaccggttattccaacctgacaatctagatttaattctattcacaacagggtcccaaaacgaaagacgacgcggattacccc 9668161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26147011 - 26147089
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||| |||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  26147011 tcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttta 26147089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 44028561 - 44028479
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||  ||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||  ||||||||||| ||||    
T  44028561 agattcaatagaagagattatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagacttta 44028479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 2207166 - 2207057
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaa 109  Q
    |||| |||||||||| |||||| |||||| |||||||| ||||| |||||||||||||| |  | |||||| || ||||  |||| |||||| |||| ||    
T  2207166 tcaatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggacaagacggactttacaagaatcaaacgacctccaa 2207067  T
Q  110 aggaaagaaa 119  Q
    ||||||||||    
T  2207066 aggaaagaaa 2207057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 3153167 - 3153090
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||||||||||||||||  ||||||||||| ||||||||||| |||||||| || |||| || ||||||    
T  3153167 agattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacaggcagcgaagacaggacaga 3153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 43311055 - 43311116
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||| |||||||||||||||||    
T  43311055 tcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagaga 43311116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 18669561 - 18669485
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||| || ||||||||||||||  |||||||||||||||||||||| |||||||| ||||||| || ||| |||||    
T  18669561 tcaagagaggagattatacctgagagagctttgaagaaagaaagggcgtagacaggaagagaagacatgacggattt 18669485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35488625 - 35488689
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||  |||||||||||    
T  35488625 aataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacagg 35488689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 12646340 - 12646401
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| |||||||||||||||||  ||||||||||| || ||||| |||||||||||    
T  12646340 aaagattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacagg 12646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 6724971 - 6724867
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||     |||||||| | ||||| |||| |||||| |||| ||| |||    
T  6724971 ggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcacgatcaagacatactttaaaagaatcaaacgacctccaaatgaa 6724872  T
Q  115 agaaa 119  Q
    |||||    
T  6724871 agaaa 6724867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 10689334 - 10689405
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    ||||||||| | ||||||| ||| ||| | |||||||| ||||| ||||||||||||||||| |||||||||    
T  10689334 tcaagggaataaattatacatgacggatccttgaagaaggaaagagcatagacaggtagagaggtcaagaca 10689405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 14440534 - 14440616
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||  ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || | ||||||||| |||||    
T  14440534 aaagattcaatagaagagattatacctgacggagctttaaaaaaggaaagtgcataaacaggaagcgcagtcaagacggattt 14440616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 33515543 - 33515461
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||| || |||||||||| ||||||| ||||||||||| || ||||| ||||||||||| || | ||||| ||| |||||    
T  33515543 aaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggattt 33515461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 33583767 - 33583717
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  33583767 ggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 33583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 20004747 - 20004812
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||||||||||||||| ||||||||||||| || || | |||||||||||  ||||||| ||||    
T  20004747 gaagagattatacctgatagagctttgaagaaggagagagtatagacaggtaacgaagtcaggaca 20004812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 32191848 - 32191928
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||  |||||| |||||||||| ||||||||||||||||| || |||| | ||||||  |||||||| ||| ||||    
T  32191848 agattcaacagaagaggttatacctgaaggagctttgaagaaagagagagcatggccaggtaacgaagtcaatacaaattt 32191928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 28253521 - 28253591
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||| |||||||||||||||||| | | ||||||| || ||||| ||||||||| | |||| |||||    
T  28253521 agattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagacatgaagagcagtca 28253591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 43722370 - 43722292
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||| |||||| ||||||||||| ||||| |||||||| ||||| ||||| | ||| ||||| ||||| ||||| ||||    
T  43722370 tcaatggaagaaattatacctgacggagccttgaagaaggaaagagcataaataggaagagaggtcaatacagaattta 43722292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 27335979 - 27335922
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||  |||||||||||||||||  |||||| |||| ||||||| ||||||||||    
T  27335979 agattcagtggaagagattatacctgtaggagctctgaaaaaagaaatggcatagaca 27335922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 20946918 - 20946878
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||| ||||||||||| |||||||||||||| |||||    
T  20946918 atacctgacggagctttgaaaaaagaaagggcataaacagg 20946878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 21965490 - 21965534
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||    
T  21965490 tcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 21965534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10486255 - 10486036
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10486255 aataaagagtcaagggaagaaagtatacctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacagattttaaaagaaccaaac 10486156  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10486155 gtcctccaaaggaaagaaaccggctattccaacccgtaagtctagctttgattcgatgcacaatagggtcccaaaaactaagacgacgcggattaccccc 10486056  T
Q  200 aacaggcaagcccaagtaca 219  Q
    || |||||||||||||||||    
T  10486055 aataggcaagcccaagtaca 10486036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 588294 - 588511
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||| |||||||| |||||||||||||| | ||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||  || ||||| |    
T  588294 aatagagattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagattttagaagtaccaagc 588393  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacc-cc 199  Q
    | || |  || || |||||||||||||||||||  ||||||||||||| |||||||| ||||||||| |||||||| |||||||| ||| ||||||| ||    
T  588394 ggccaccgaaagagagaaatcggctattccaactcgtaagtctagcttgaattcgattcacaatagggtcccaaaagctaagacgccgcagattaccgcc 588493  T
Q  200 aacaggcaagcccaagta 217  Q
    || ||| ||||| |||||    
T  588494 aataggtaagcctaagta 588511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 22094602 - 22094425
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||| ||||| ||||||||||| | |||||||||||||| ||| |  |||||||||     
T  22094602 aataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaaccaaat 22094503  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || | ||| || || || || ||||||||||| |  |||||||||||||| |||| ||||| ||||||||| ||||    
T  22094502 ggccaccaaaagagaggaaacgactattccaacccgacagtctagctttaatacgattcacaacaggatcccagaaac 22094425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 35122038 - 35121866
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||||||||| || |||||||  |||| ||| || |    
T  35122038 aaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactgattttaggagaatcaagcgac 35121939  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | | ||| || |||||||||||||| || || |  ||||||| |||||| | || ||||| ||||||||||||    
T  35121938 caccaaacgagagaaatcggctattgcatcccgacagtctagatttaatactattcacaacaggatcccaaaa 35121866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38358254 - 38358329
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  38358254 aataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtca 38358329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 42514510 - 42514607
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  42514510 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 42514607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 19506788 - 19506983
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||| | | ||||||||  || | ||| || ||||| || || |    
T  19506788 aaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaagcaaagaagtcagaactgctttcaagagaactaagcgac 19506887  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || | ||| ||||||||||||||||  ||||||| |||||||  || ||||| ||| | ||||||   || |||||||||||||||||    
T  19506888 caccgaacgataaaaaccggctattccaacctgacagtctagatttaattttattcacaacagggttccaaaacgaaaaacgacgcggattacccc 19506983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 20208059 - 20207897
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||| || | |||||| ||||| ||||||| ||| || | | | ||     
T  20208059 ggaagagattatacatgatggagctttgaagaaggaaagcgcatagacaggcagagaggttaggacagactttaaaagaaccagacggccgccataagat 20207960  T
Q  115 agaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaa 177  Q
    | ||| || ||||||||||| |  |  |||| |||||| |||| ||||||||| |||||||||    
T  20207959 aaaaaacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaa 20207897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 21084677 - 21084755
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  21084677 tcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttta 21084755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 30731664 - 30731567
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| ||| || ||||  |||| ||||||    
T  30731664 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacg 30731567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 23239173 - 23239245
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  23239173 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 23239245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 28535026 - 28534954
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  28535026 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 28534954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 26261656 - 26261586
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||| |||| ||||    
T  26261656 gaagagattatacctgaaggagctttgaagaaggaaagagcatagacagatagagaagtcaggacatattt 26261586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 41590885 - 41590963
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||| | ||||||||||||||| ||||||||||| ||||    
T  41590885 tcaagggaagaaattatacctgacggagccttgaagaaggaaagagtatagacaggtagagaggtcaagacagacttta 41590963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 30509373 - 30509300
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaa 77  Q
    ||||| |||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||||    
T  30509373 aaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaa 30509300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 30549716 - 30549643
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaa 77  Q
    ||||| |||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||||    
T  30549716 aaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaa 30549643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6050027 - 6050123
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaacca 97  Q
    |||||||| | || |||||| |||||||||||||||||||||||||| ||||| ||||||||||| || || ||||  ||||| ||||| |||||||    
T  6050027 aataaagaattaatggaagatattatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaacca 6050123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 35983141 - 35983062
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||||| |||| |||||||||||||  |||||||||| || ||||| |||||||||||||||| ||||| ||||||    
T  35983141 aaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacaga 35983062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4297653 - 4297575
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| ||||  |||||||| ||||| ||||||||||||||||| ||||||| ||| ||||    
T  4297653 tcaagggaagaaattatacctgacggagtcttgaagaaggaaagagcatagacaggtagagaggtcaagatagacttta 4297575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29572220 - 29572138
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29572220 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29572138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29573597 - 29573515
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29573597 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29573515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29574974 - 29574892
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29574974 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29574892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29576351 - 29576269
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29576351 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29577728 - 29577646
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29577728 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 29579105 - 29579023
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||| |||  ||||||||||||| ||||| ||||||||||| ||||| ||||  ||||||||    
T  29579105 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29579023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 33170448 - 33170530
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||| ||||||||||||| ||||||||||| || ||||| |||||||||||||| | ||||| |||| ||||    
T  33170448 aaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggacaaattt 33170530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42260069 - 42260151
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||| || |||||||| || || |||||||||||    
T  42260069 aataaagtttcaatggaaaagattatatctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacaga 42260151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 22174342 - 22174264
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||| |  ||||||| |||||||||    
T  22174342 agattcaatggaagagattatacctgatggaaccttgaagaaagaaa--gcatagacaggaattgaagtcatgacagattt 22174264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 27796274 - 27796335
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  27796274 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 27796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 36256576 - 36256680
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    ||||||||||  ||||| |||||| |||||||| ||||| |||||||||||||| |  ||||||||||| ||||| |||| ||| || |||| ||| |||    
T  36256576 ggaagagattgcacctgttggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaagaa 36256675  T
Q  115 agaaa 119  Q
    |||||    
T  36256676 agaaa 36256680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 8299532 - 8299471
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||  ||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  8299532 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 8299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 6885715 - 6885759
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatag 60  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  6885715 gaagagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15862038 - 15861974
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||||| ||||||||| |||||||| | | |||||||||||||||| ||| |||||||    
T  15862038 aataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacagg 15861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 10780991 - 10781050
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    ||||||||||  ||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  10780991 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 25856776 - 25856677
Alignment:
Q  17 aagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaag 116  Q
    |||||||||||||||| ||||||||||| || ||||| ||||||||||| |  | ||| ||||||||||| | ||||| ||| || || | |||||||||    
T  25856776 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacagatttgagcagaatcaagcgaccaccaaaggaaag 25856677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 380712 - 380806
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaaa 119  Q
    |||||||||| |||||||||||| ||||| ||||||||| | ||||| ||||||||| | ||||  |||||||| || || ||||| || |||||    
T  380712 atacctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaagacaaactttagaagaaccaaccggcccctaaaagagagaaa 380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 478950 - 479002
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||| ||| ||||||||||| || ||||||||||| |||||    
T  478950 aataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 479002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15829935 - 15829883
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||| ||| ||||||||||| || ||||||||||| |||||    
T  15829935 aataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 15829883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 22438021 - 22438077
Alignment:
Q  17 aagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaag 73  Q
    |||||||||||||||| |||||| ||||||| ||||  ||||||||| |||||||||    
T  22438021 aagagattatacctgagggagctatgaagaaggaaaaagcatagacatgtagagaag 22438077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 11266916 - 11266966
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||| ||||||| ||| || |||||||| |||||||||||||||||||||    
T  11266916 aaagagtcaagggtagaaatgatacctgagggagctttgaagaaagaaagg 11266966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 31865089 - 31865259
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcct 105  Q
    |||||||| |||||||||| || || |||||| | ||||||| ||||  ||||||||||  | ||| ||||  | |||||| |  |||||||| || |||    
T  31865089 agattcaatggaagagattttaacttatggagttctgaagaaggaaaaagcatagacagacaaagaggtcagaatagatttaagtagaaccaagcggcct 31865188  T
Q  106 ctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | ||| || ||||||||||| |||||||| |  |  |||| |||||| |||| ||||||||| || |||||    
T  31865189 ccaaaagagagaaatcggcttttccaacccgacaacctagatttaatacgattcacaatagggtctcaaaa 31865259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 33385299 - 33385241
Alignment:
Q  28 cctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||| ||||||||||| || ||||| ||||||||||| || | |||||||||||||||    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagattt 33385241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 2682532 - 2682609
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| ||| |||||||||||||  |||||| |||| ||||||||||  |||||| | ||||||| || ||||||    
T  2682532 agattcaatggaggagattatacctgcaggagctctgaaaaaagaaagggagtagacatgcagagaagacatgacaga 2682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 7453139 - 7453324
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||    
T  7453139 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacagattttaaaagaaccagac 7453238  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacga 186  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  7453239 gtcctccaaaggaaagaaaccggctattccaacccgtaagtctagctttaactcgattcacaataggatcccaaaaactaagacga 7453324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4987418 - 4987222
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |  ||||||||||    
T  4987418 aataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaac 4987319  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacc 197  Q
    | || | ||| ||||| || || |||||||||||||  ||||||| ||| |  |||| ||||| ||| ||||| ||||  | |||||| ||||||||    
T  4987318 ggccaccaaaagaaaggaaacgactattccaacctgacagtctagattttacacgattcacaacagggtcccagaaacacaaacgacgaggattacc 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 36157944 - 36158118
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||| ||||||| |||||||   | |    
T  36157944 aaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatattttaaaagaaccagctg-c 36158042  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    ||||||| || | ||| || ||||||||||| |  |  ||| |||||||  ||| ||||||||||||||| |||||    
T  36158043 ctctaaaagagaaaaaacgtctattccaaccagacatcctaactttaatctgattcacaataggatcccagaaact 36158118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 12332644 - 12332735
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    ||||||||||| ||||||||||||||||| |||||||| || || ||||||||||||||||| ||||||||||| ||||  |||||||||||    
T  12332644 tcaagggaagaaattatacctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaaccaaacg 12332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43612538 - 43612463
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||    
T  43612538 aataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagacatgaagagaagtca 43612463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 16375453 - 16375279
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||  || ||||||||||||| ||||| ||||||||| ||||| | ||||||||| ||||| |||||||||||||| |  |||||||| || |    
T  16375453 aaagattcaatagaggagattatacctgttggaggtttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaagcgac 16375354  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | | ||| || ||||| || ||||||||||||   ||||||| |||||| || | ||||||||| ||||| ||||    
T  16375353 caccaaaagagagaaaccgactattccaacctaacagtctagatttaatacggttcacaataggttcccagaaac 16375279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 7925176 - 7925273
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  7925176 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 7925273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 23942874 - 23943070
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||| | ||||||||  || ||||| |  || | ||| |    
T  23942874 aataaagattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactgatttgagaaggatcaagc 23942973  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacc 197  Q
    | || |  || || ||||||| |||||||||||| |  | ||||| ||||||||||| ||| || || ||||||||   |||||  |||||||||||    
T  23942974 ggccaccgaaagagagaaatctgctattccaacccgacaatctagatttaattcgattcacgattggttcccaaaactaaagactccgcggattacc 23943070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 6901728 - 6901799
Alignment:
Q  5 aagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||    
T  6901728 aagattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagacatgcagagaagtca 6901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 9923391 - 9923509
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| | |||||||||||||| ||||||||| || || |  ||||||||||| |    
T  9923391 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgtatagacaggtagagcagtcaagacggacttaagaagaaccaaacgac 9923490  T
Q  104 ctctaaaggaaagaaatcg 122  Q
    | | ||| ||||| |||||    
T  9923491 caccaaaagaaaggaatcg 9923509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36493177 - 36493255
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  36493177 tcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttta 36493255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17659628 - 17659733
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| |||||||||||||| |||||||||||| ||||| ||||| ||||||||||| | ||| |||| |||||| ||||||| ||||| ||    
T  17659628 aataaagaatcaatggaagagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactttaacaaaaccagac 17659727  T
Q  101 gtcctc 106  Q
    | ||||    
T  17659728 ggcctc 17659733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 11393681 - 11393609
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||||    
T  11393681 aaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacaggcaaagaagtca 11393609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 24794510 - 24794582
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||||    
T  24794510 aaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtca 24794582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 8300593 - 8300708
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||||||  ||||||||||| || ||||| |||||||||||||||| ||||| ||| || ||||  |||| |||||| |    
T  8300593 aaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggc 8300692  T
Q  104 ctctaaaggaaagaaa 119  Q
    | |  |||||||||||    
T  8300693 caccgaaggaaagaaa 8300708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 28453818 - 28453738
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||| || |||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| | ||| ||||||||    
T  28453818 agattcaagagatgagattatacctgagggagctttgaaaaaagaaagggcgtagacaggcagagatgacaaaacagattt 28453738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43611544 - 43611469
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| || ||||||||||||||||||| || ||||||||||  ||| |||||||||||| ||||||||||    
T  43611544 aataaagatttaatggaagagattatacctgatagaactttgaagaataaaaaggcatagacaggaagagaagtca 43611469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 17700270 - 17700352
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||  |||||||||||| |||| ||||||||||| || ||||| ||||||||||| || | |||||||||||||||    
T  17700270 aaagattcaatagaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagattt 17700352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 45255179 - 45255097
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaacca 97  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||  || || ||||  ||||| ||||| |||||||    
T  45255179 ggaagagattatacctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaacca 45255097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 13878837 - 13878776
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  13878837 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 13878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 20825089 - 20825202
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaa-gaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgt 102  Q
    ||||||||||  ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||| || | |||||||||| |||| | ||||| ||| ||     
T  20825089 aaagattcaatagaagagattatacctgacggagctttgaaaaaaggaaagtgcatagacaggaagcgcagtcaagacatatttgagcagaatcaagcga 20825188  T
Q  103 cctctaaaggaaag 116  Q
    || | |||||||||    
T  20825189 ccaccaaaggaaag 20825202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 32267344 - 32267416
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| ||||||||||||||||||   ||||||||| || ||||| |||||||||||||||| |||||    
T  32267344 aaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtca 32267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 29721259 - 29721200
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  29721259 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 29721200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 41664718 - 41664523
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||| ||||||||||||| ||||||||||| || ||||| || ||||||||| ||| ||||| ||| || ||||  |||| |||||| |    
T  41664718 aaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtagaatcaaacgac 41664619  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || || || || || | |||||| |  | ||||| |||||| |||| ||||| ||| ||||||||   |||||||||||||| |||||    
T  41664618 caccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaacaaaagacgacgcggatcacccc 41664523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12135010 - 12135072
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    ||||||||||||| ||||||||||||||| |||| |||||| ||||| ||||| |||||||||    
T  12135010 aataaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 15539868 - 15539931
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||||||| |||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||    
T  15539868 atacctgacggagctttgaagaaggaaagagcataaacaggcagagaggtcaagacagacttta 15539931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 16839224 - 16839157
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaag 73  Q
    ||||||||  || ||||||||||||| |||||| ||||| |||||||| ||||| |||||||||||||    
T  16839224 agattcaatagaggagattatacctgctggagccttgaaaaaagaaagcgcataaacaggtagagaag 16839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 33070092 - 33070155
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaag 73  Q
    ||||| || |||||||||||||| |||||||||||||||||||  || |||||||| |||||||    
T  33070092 tcaagagaggagattatacctgagggagctttgaagaaagaaatagcgtagacaggaagagaag 33070155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 41691108 - 41691031
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| |||||||||||||||||  |||||| |||| ||||||||||  |||||||| || |||| || ||||||    
T  41691108 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggtgtagacaggcagtgaagacaggacaga 41691031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 25193892 - 25193955
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||||||||||||  ||||||||||||| ||||| ||||||||||  || || |||||||||    
T  25193892 agagattatacctgacagagctttgaagaaggaaagagcatagacagtaagcgaggtcaagaca 25193955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 26774585 - 26774518
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||||||||| ||| |||||||||||||| || || ||||||| |||||  ||||||| ||||||    
T  26774585 gaagagattatacatgacggagctttgaagaaggagagagcatagataggtaacgaagtcaggacaga 26774518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5585476 - 5585522
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaa 47  Q
    |||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  5585476 aatatagattcaatggaagagattatacatgatggagccttgaagaa 5585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 6245891 - 6245933
Alignment:
Q  21 gattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||||| |||||||||||||| ||||| |||||||||    
T  6245891 gattatacctgacggagctttgaagaaggaaagagcatagaca 6245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 36025322 - 36025360
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  36025322 ggaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 37165469 - 37165431
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaa 44  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  37165469 agattcaatggaagagattatacctgacggagctttgaa 37165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 10530461 - 10530510
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||| ||||    
T  10530461 ggaagagattatacctgaaggagctttgaaaaaggaaagtgcataaacag 10530510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 14345259 - 14345210
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    ||||||||||||| |||||||||  |||||||| ||||| ||||||||||    
T  14345259 ggaagagattatatctgatggagtcttgaagaaggaaagagcatagacag 14345210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8445600 - 8445652
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||| |||||||| |||||| || |||||||| |||||||||||||| |||||    
T  8445600 aatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14490516 - 14490568
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||| ||| ||| ||||||| || ||||||||||| |||||    
T  14490516 aataaagattcaagggtagaaattgtacctgagggggctttgaagaaggaaag 14490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 18187947 - 18187995
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    ||||||||| ||||||| |||||||||||||  ||||| ||||||||||    
T  18187947 gaagagattgtacctgacggagctttgaagatggaaagagcatagacag 18187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 28992558 - 28992510
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||||||||||| ||  |||||||||| ||||| |||||||||    
T  28992558 ggaagagattatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3901 - 3682
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||     
T  3901 aataaagagtcaagggaagaaagtatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaat 3802  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||| | |||||||||||| | |||||||||||| |||||||||| ||| ||||||||||||||| | |||||||||||||| |||||||| ||| ||||    
T  3801 gtccgccaaaggaaagaaaccagctattccaacccgtaagtctagatttgattcgatgcacaatatggtcccaaaaactaagccgacgcgggttaccccc 3702  T
Q  200 aacaggcaagcccaagtaca 219  Q
    ||  ||||||||||||||||    
T  3701 aattggcaagcccaagtaca 3682  T

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Target: scaffold0029 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 134198 - 133979
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| ||||||||||| | |||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |    
T  134198 aataaagagtcaagggaagaaagtatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaacc 134099  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||| | |||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  134098 gtccaccaaaggaaagaaaccggctattccaacccgtaagtctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattaccccc 133999  T
Q  200 aacaggcaagcccaagtaca 219  Q
    || ||| |||||||||||||    
T  133998 aataggtaagcccaagtaca 133979  T

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Target: scaffold0002 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 312026 - 311807
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| ||||||||||| | |||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |    
T  312026 aataaagagtcaagggaagaaagtatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaacc 311927  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatta-cccc 199  Q
    |||| | |||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  311926 gtccaccaaaggaaagaaaccggctattccaacccgtaagtctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattaccccc 311827  T
Q  200 aacaggcaagcccaagtaca 219  Q
    || ||| |||||||||||||    
T  311826 aataggtaagcccaagtaca 311807  T

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Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25504345 - 25504183
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  ||||||||||    
T  25504345 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggaagagaggtcaacacagatttgagaagaaccaaac 25504246  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaa 163  Q
    | || | ||| || || || || |||||||||||||  ||||||| ||| || |||| |||||    
T  25504245 ggccaccaaaagagaggaaacgactattccaacctgacagtctagattttatacgattcacaa 25504183  T

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Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 7396073 - 7395897
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||  |||||||||  | ||| ||||||||||| ||||||| ||||||||    
T  7396073 aataaagattcaacggaagagattatacctgatggagctttgaagaaggaaagatcatagacagacaaagaggtcaagacagactttaacaaaaccaaac 7395974  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | |||||| ||||| || || |||||||| |  |  ||||| ||||| |||| |||||||||||| || |||||    
T  7395973 ggccgccaaaggagagaaaacgactcttccaaccag--accctagccttaatacgattcacaataggatctcagaaact 7395897  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 20796450 - 20796645
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||||  || | ||| || || ||||| || |    
T  20796450 aaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggaaaagaagtcagaactgctttcaaaaggaccaagcgac 20796549  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || |||||||| |||||||||||||  | ||||| |||||||| || ||||| ||| ||||||||   |||||||| |||||||||||    
T  20796550 caccgaacgagagaaatcgactattccaacctgacaatctagatttaattctattcacaacagggtcccaaaatgaaagacgacacggattacccc 20796645  T

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Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 48072761 - 48072602
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || || | ||| || ||||    
T  48072761 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 48072662  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  48072661 accgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 48072602  T

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Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 32352647 - 32352488
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||| || || | ||| || ||||    
T  32352647 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 32352548  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  ||||||| |||||| | || ||||||||| ||||| ||||    
T  32352547 accgactattccaacccgacagtctagatttaatacaattcacaataggttcccagaaac 32352488  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 26721434 - 26721598
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||| |||| | ||||| ||||||| ||| || | | | ||     
T  26721434 ggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaaccagacggccgccataagat 26721533  T
Q  115 agaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | ||| || ||||||||||| |  |  |||| |||||| |||| ||||||||| |||||||||||    
T  26721534 aaaaaacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaact 26721598  T

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Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 5497891 - 5498050
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaaagaa 118  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||| | ||| |||| ||||||||| |  |||||||| || || | ||| || ||||    
T  5497891 gagattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 5497990  T
Q  119 atcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  5497991 accgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 5498050  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 17708845 - 17709023
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||| | |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||  ||||| ||||||  ||||| ||    
T  17708845 aataaaaagtcaacggaagagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactttaactaaaccagac 17708944  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || ||||| || ||||||||||| |  |  |||||||| || |||| |||||  || |||||||||||    
T  17708945 ggccgccaaaagatagaaaacgactattccaaccagacaacctagcttttatacgattcacaaatggttcccaaaaact 17709023  T

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Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 6051393 - 6051490
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  6051393 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 6051490  T

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Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 35541824 - 35541939
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||| || ||||  |||| |||||| |    
T  35541824 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggc 35541923  T
Q  104 ctctaaaggaaagaaa 119  Q
    | |  |||||||||||    
T  35541924 cacctaaggaaagaaa 35541939  T

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Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 39431076 - 39431271
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||||||||||||||||||| || || ||||| ||||||||||| |  ||| ||| ||| | ||| || || ||||| || |    
T  39431076 aaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacaggcaacgaattcaggactgctttcaaaaggaccaagcgac 39431175  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggattacccc 199  Q
    | |  || || ||||| || |||||||||||||  | ||||| |||||||| || ||||| ||| ||||||||   |||||||| |||||||||||    
T  39431176 caccgaacgagagaaaccgactattccaacctgacaatctagatttaattctattcacaacagggtcccaaaatgaaagacgactcggattacccc 39431271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3074531 - 3074593
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  3074531 aataaagattcaagggtagagattatacctgatggagctctgaagaaggaaagggcatagaca 3074593  T

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Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10710556 - 10710379
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||  | ||| ||||  || || ||||||||||| | ||    
T  10710556 aataaagaatcaatggaagagattatacctgatggagctttgaag-aaggaagcgcatagacagacaaagaggtcagaaccgactttaacagaactagac 10710458  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | ||| || ||||||||||| || |  |||||||| || |||| ||||||||| |||||||||||    
T  10710457 ggccgccaaaagataaaaaacgactattccaaccagtcaacctagcttttatgcgattcacaataggttcccaaaaact 10710379  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 49264315 - 49264254
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  49264315 aaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacagg 49264254  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 19042913 - 19043041
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||   |||||||||||||||||||||||  |||||| ||||||||||| ||||||||||||| || |||||| ||||  |||| ||| || |    
T  19042913 aaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacaggtagagaagacaggacagactttatgagaatcaagcggc 19043012  T
Q  104 ctctaaaggaaagaaatcggctattccaa 132  Q
    ||| ||| |||||||| || || ||||||    
T  19043013 ctccaaacgaaagaaaacgactcttccaa 19043041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22191135 - 22191053
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||  ||||||||||| ||||||| |||||||||    
T  22191135 aataaagattcaagggttgagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaagacaagacaga 22191053  T

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Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 45271037 - 45271110
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| ||||| |||||||||||    
T  45271037 tcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggaagagaggtcaagacaga 45271110  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 47622425 - 47622343
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||||||| ||||||||||||| |||| ||||||||||| || ||||| ||||||||||| |||| ||||| |||||| ||||    
T  47622425 agattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagacttta 47622343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3544437 - 3544373
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacag 82  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| |  || ||||||||||    
T  3544437 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacag 3544373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 44890239 - 44890315
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||| ||||| |||||||||||||| ||||| ||||| | ||| | |||||||||||| ||||||||||||||    
T  44890239 atacctgaaggagccttgaagaaagaaagagcataaacaggcatagatgacaagacagatttcaacagaaccaaacg 44890315  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 48434942 - 48435030
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaa 94  Q
    |||||||| |||||||||||||||||  ||||||||||| || ||||| || |||||||| |  |||| || |||||||||||| ||||    
T  48434942 agattcaatggaagagattatacctgcgggagctttgaaaaaggaaagagcgtagacaggcaatgaagacaggacagattttaaaagaa 48435030  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 5809387 - 5809434
Alignment:
Q  20 agattatacctgatggagctttgaagaaagaaagggcatagacaggta 67  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  5809387 agattatacctgacggagctttgaagaaggaaagagcatagacaggta 5809434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33260036 - 33259973
Alignment:
Q  20 agattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||| |||||||| |||||||||||||| ||||| ||||||||||| |||||  ||||||||||    
T  33260036 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacaga 33259973  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33280195 - 33280132
Alignment:
Q  20 agattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||| |||||||| |||||||||||||| ||||| ||||||||||| |||||  ||||||||||    
T  33280195 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacaga 33280132  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21409028 - 21409098
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||   |||||||||| |||||    
T  21409028 aataaagattcaagggttgagattatacctgatggtgctctgaagaaggaaaaaacatagacaggaagaga 21409098  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 19014331 - 19014274
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    |||||||| ||||||||||||| ||||  ||||||||||||| ||||| |||||||||    
T  19014331 agattcaatggaagagattatatctgacagagctttgaagaaggaaagagcatagaca 19014274  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28358695 - 28358740
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagaca 63  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  28358695 agagattatacctgacggagctttgaagaaggaaagagcatagaca 28358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43943830 - 43943750
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||||||| ||  ||||||||||||| ||  |||||| ||||||| ||||||||||| ||||| || |||| |||||||    
T  43943830 aataaagattaaatagaagagattatacatgcgggagctctgaagaaggaaagggcatatacaggcagtgaagacaagaca 43943750  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 20987959 - 20988022
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||| |||| ||| |||||||||||||| ||||| |||||||||||||| || |||| ||||    
T  20987959 agagatgatacatgacggagctttgaagaaggaaagagcatagacaggtagcgaggtcaggaca 20988022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 51052701 - 51052768
Alignment:
Q  34 ggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||||||| ||||| |||||||||||||||| ||||| ||| || ||||  |||| ||||||    
T  51052701 ggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacg 51052768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 13867176 - 13867127
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggta 67  Q
    ||||||||||||||| ||||| |||||||| ||||| ||||| |||||||    
T  13867176 agagattatacctgacggagccttgaagaaggaaagagcatatacaggta 13867127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15674619 - 15674796
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||  || ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||| | |    
T  15674619 aataaagattcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaacccagc 15674718  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || | ||| || ||||| || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  15674719 gaccaccaaaagagagaaaccgtctattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 15674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 649426 - 649248
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||  ||||| ||||||| ||||| ||    
T  649426 aataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactttaacaaaaccagac 649327  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || ||||| || ||||||||||  |  |  |||||||| || |||| |||||| || |||||||||||    
T  649326 ggccgccaaaagatagaaaacgactattccaactagacaacctagcttttatgcgattcacaattggttcccaaaaact 649248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 26206123 - 26206297
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    ||||||||||  || ||||||||||||||||||||||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || |    
T  26206123 aaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgac 26206222  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | | ||| || ||||| || ||||||||||| |  ||||||| |||||| |||| ||||||||| ||||| ||||    
T  26206223 caccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaac 26206297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 194
Target Start/End: Original strand, 13086333 - 13086523
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| | ||||||||||||||||||||||||| ||||| ||||| ||||| ||||| | ||||||||  || | ||| || || ||||| || |    
T  13086333 aaagattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgac 13086432  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaactaagacgacgcggatt 194  Q
    | |  || |||||||| ||||||||||||| ||  ||||||| |||||||| || ||||| ||| ||||||||   |||||||||||||||    
T  13086433 caccgaacgaaagaaaccggctattccaacttgacagtctagatttaattctattcacaacaggttcccaaaacgaaagacgacgcggatt 13086523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17078420 - 17078242
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||| ||||  || || ||||||||||||| ||    
T  17078420 aataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacagacagagaggtcagaactgactttaacagaaccatac 17078321  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | |||  | ||||||||||| |  |  |||||||| ||||||| ||||||||| |||||||||||    
T  17078320 ggccgccaaaagataaaaaaagactattccaaccagacaacctagcttttattcgattcacaataggttcccaaaaact 17078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 33640704 - 33640881
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||| |||||||| ||  ||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  ||||||||||    
T  33640704 aataaagattcaagggtagaaattatacccgacagagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaac 33640803  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaac 178  Q
    | || | ||| || || || || |||||||||||||  |||||||  || || |||| ||||| ||| ||||| ||||    
T  33640804 ggccaccaaaagagaggaaacgactattccaacctgacagtctagactttatacgattcacaacagggtcccagaaac 33640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 11060215 - 11060037
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| ||||| ||||||||||| | | | |||| |||||| ||||||| ||||| ||    
T  11060215 aataaagaatcaatggaagagattatacctgatggaactttgaagaaggaaagcgcatagacaggcaaaaaggtcaggacagactttaacaaaaccagac 11060116  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | || | ||| || | ||| || || |||||||| |  |  |||||||| || |||| ||||||||||||||| |||||    
T  11060115 ggccaccaaaagataaaaaacgactgttccaaccagacaacctagcttttatacgattcacaataggatcccagaaact 11060037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 502885 - 502785
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||| ||||   ||||||| |  ||||||||||    
T  502885 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcatagaggtcagcgcagatttgagaagaaccaaac 502786  T
Q  101 g 101  Q
    |    
T  502785 g 502785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 21549634 - 21549789
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaac 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||| ||||  || ||||| |  |||| ||| |    
T  21549634 aataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaagcagagatgtcagaactgatttgaggagaatcaagc 21549733  T
Q  101 gtcctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgat 157  Q
    | || | ||| || |||||||  ||||||||||| || ||||||| |||||| ||||    
T  21549734 ggccaccaaaagagagaaatctactattccaacc-gtcagtctagatttaatgcgat 21549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 17605684 - 17605602
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||  ||||||||||||||||||||||||||||| || ||||| ||||||||||| || | |||||||||||||||    
T  17605684 aaagattcaatagaagagattatacctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagattt 17605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 2554395 - 2554467
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||| ||||||||||||||| || ||||||||||| || ||||| |||||||||||||||| |||||    
T  2554395 aaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 2554467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 24766764 - 24766692
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    ||||||| || |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  24766764 aaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 24766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 21629469 - 21629390
Alignment:
Q  7 gattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||  ||||||||||||||||| ||||||||||| || ||||| ||||||||||| || | |||||||||||||||    
T  21629469 gattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagattt 21629390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 13938508 - 13938590
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||| ||| || | ||||| |||||||||    
T  13938508 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagattt 13938590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 17577067 - 17576985
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    ||||||||||  ||||||||||||||||| ||||||||||| || ||||| | ||||||||| || | |||||||||||||||    
T  17577067 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagattt 17576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 11469363 - 11469529
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||| |      |||| |||||||||| ||| |||||||  |||| ||| |  |    
T  11469363 aaagattcaatggaagagattaaacctgatggagctttgaagaaggaaagag------caggaagagaagtcaggactgattttagaagaatcaagcagc 11469456  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | | ||| || |||||  |||||||||| || |  ||||||| ||||||||||| |||||| || ||||||||    
T  11469457 caccaaatgagagaaacaggctattccaccccgacagtctagatttaattcgattcacaatcgggtcccaaaa 11469529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14843473 - 14843409
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacag 82  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| |  || ||||||||||    
T  14843473 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacag 14843409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 18681924 - 18681752
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtc 103  Q
    |||||||||| || |||||||||||| |||||||||||||| || ||||| || |||||||| ||   ||||| ||||||||| | ||| | |||||| |    
T  18681924 aaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagagcgtagacaggaagtctagtcaggacagatttgagcaggatcaaacgac 18681825  T
Q  104 ctctaaaggaaagaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaa 176  Q
    | | |||  |||| || || |||| |||||| || | |||||||||||| ||||   | ||||||||||||||    
T  18681824 caccaaaataaaggaaccgactatgccaaccagtcaatctagctttaatacgattatcgataggatcccaaaa 18681752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 19616227 - 19616147
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||| |||||||||||||||||  |||||| | || |||||||||||||||||||| ||||| | || |||||||||    
T  19616227 agattcaatggaagagattatacctgcaggagctctaaaaaaagaaagggcatagacaggcagagaggacatgacagattt 19616147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 25351027 - 25351107
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaa 98  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||| || || ||||||||| | ||||| || |||||    
T  25351027 agagattatacctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtcaagacaaactttaaaaggaccaa 25351107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1104300 - 1104225
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 76  Q
    |||||||||||||   |||||||| ||||| |||||||||||||||| ||||| ||||||||||  ||||||||||    
T  1104300 aataaagattcaatataagagattgtacctaatggagctttgaagaaggaaagagcatagacagacagagaagtca 1104225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29056306 - 29056375
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||||||| ||||| ||||||||||||||||||| || |||| || ||||||||||||||||| |||||    
T  29056306 aataaagattaaagggtagagattatacctgatggacctctgaa-aaggaaagggcatagacaggaagaga 29056375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 1308015 - 1307956
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    |||||||| ||||||||||||||||| ||||||| |||| ||||||||| | ||||||||    
T  1308015 agattcaatggaagagattatacctgctggagctctgaaaaaagaaaggacgtagacagg 1307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 13563276 - 13563213
Alignment:
Q  8 attcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 71  Q
    |||||| |||| ||||||||||||| ||||||||||| || ||||| ||||||||||| |||||    
T  13563276 attcaatggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacaggcagaga 13563213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 26514529 - 26514612
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    ||||| |||||||||  ||||||||||||||||||| ||||||||||| || || |||||||| || || || || ||||||||    
T  26514529 agagagtatacctgacagagctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacg 26514612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28575814 - 28575751
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacag 64  Q
    |||||||||||||  ||||| ||||||||||||| |||||||||||| |||| | |||||||||    
T  28575814 aataaagattcaatagaagatattatacctgatgaagctttgaagaaggaaatgacatagacag 28575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32186470 - 32186552
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    ||||||| ||||| ||||||||||||| |||  |||||||||||||||||||| |  |||||||| || || |||| ||||||    
T  32186470 aataaagtttcaatggaagagattatatctgtcggagctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacaga 32186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 14686344 - 14686295
Alignment:
Q  18 agagattatacctgatggagctttgaagaaagaaagggcatagacaggta 67  Q
    ||||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  14686344 agagattatacctgacggagccttgaagaaggaaagagcatagacaggta 14686295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 10362972 - 10363015
Alignment:
Q  40 ttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 83  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||    
T  10362972 ttgaagaaggaaagagcatagacaggtagagaggtcaagacaga 10363015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 12673467 - 12673392
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagaca 81  Q
    |||||| | ||||||||||||||  |||||| | |||||||| ||||| ||||||||||| |||| ||||| ||||    
T  12673467 agattctatggaagagattatactagatggatcgttgaagaaggaaagagcatagacaggcagagcagtcaggaca 12673392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17230695 - 17230746
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaa 52  Q
    |||||||| ||||||| ||| || |||||||| |||||||||||||||||||    
T  17230695 aataaagaatcaagggtagaaatgatacctgagggagctttgaagaaagaaa 17230746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34372289 - 34372243
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaa 47  Q
    |||||||||||||||| ||| ||||||||||| || |||||||||||    
T  34372289 aataaagattcaagggtagaaattatacctgagggggctttgaagaa 34372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 19350734 - 19350831
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |  ||| ||||||||||| |||||||||||||| |||||  |||||||||| || ||| |||  ||||| || |  |||||||||||    
T  19350734 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagtacagacttaagaagaaccaaacg 19350831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7217679 - 7217631
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||||||||| ||| || |||||||| || ||||||||||||||||||    
T  7217679 agattcaagggtagaaataatacctgagggggctttgaagaaagaaagg 7217631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17980800 - 17980748
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||| ||||||||||||| | || ||||| ||||| |||||    
T  17980800 aataaagattcaagggtagagattatacctaaaggggctttaaagaaggaaag 17980748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 18589140 - 18589176
Alignment:
Q  17 aagagattatacctgatggagctttgaagaaagaaag 53  Q
    |||||||||||||||||||||| |||||||| |||||    
T  18589140 aagagattatacctgatggagccttgaagaaggaaag 18589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 105193 - 105096
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| ||||| |||||| ||||  |||| ||||||    
T  105193 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacg 105096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 8333 - 8497
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||| |||||| ||||| ||||||| ||  || | | | ||     
T  8333 ggaatagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaaccagacagccgccataagat 8432  T
Q  115 agaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | ||| || ||||||||||| |  |  |||| |||||| |||| ||||||||| |||||||||||    
T  8433 aaaaaacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaact 8497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 13267 - 13431
Alignment:
Q  15 ggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctctaaaggaa 114  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || | |||| | ||||| ||||||| ||  || | | | ||     
T  13267 ggaatagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaaccagacagccgccataagat 13366  T
Q  115 agaaatcggctattccaacctgtaagtctagctttaattcgatgcacaataggatcccaaaaact 179  Q
    | ||| || ||||||||||| |  |  |||| |||||| |||| ||||||||| |||||||||||    
T  13367 aaaaaacgactattccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaact 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15014 - 14942
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaag 73  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||    
T  15014 aataaagattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacaggtagagaag 14942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 4042 - 4139
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacg 101  Q
    |||||||||| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||| || ||||  |||| ||||||    
T  4042 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacg 4139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 182902 - 182998
Alignment:
Q  1 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaacca 97  Q
    |||||||| | || |||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||| ||||  || || |||||||||||||    
T  182902 aataaagaattaatggaagagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaaccgactttaacagaacca 182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28570 - 28648
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||| |||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  28570 tcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttta 28648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 55461 - 55539
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||| ||| ||| |||||||| ||||| ||||||||||||||||| ||||||| ||| ||||    
T  55461 tcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagacttta 55539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 143172 - 143094
Alignment:
Q  10 tcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    ||||||||||| ||||||||| ||| ||| |||||||| ||||| ||||||||||||||||| ||||||| ||| ||||    
T  143172 tcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagacttta 143094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 26105 - 26184
Alignment:
Q  19 gagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaa 98  Q
    ||||| |||||||| ||||| |||||||||||||||||||| ||||| || || | || |||||||||||| ||||||||    
T  26105 gagatgatacctgacggagccttgaagaaagaaagggcataaacaggcagcgatgacaggacagattttaatagaaccaa 26184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 63648 - 63566
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagatttta 88  Q
    |||||||| |||||||||||||||||| | ||| |||||||| ||||| ||||| ||||| ||  | ||||||||||||||||    
T  63648 agattcaatggaagagattatacctgaagaagccttgaagaaggaaagagcataaacaggaagcaaggtcaagacagatttta 63566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 1138 - 1093
Alignment:
Q  16 gaagagattatacctgatggagctttgaagaaagaaagggcataga 61  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||    
T  1138 gaagagattatacctgatggagccttgaagaaggaaagtgcataga 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 334 - 395
Alignment:
Q  4 aaagattcaagggaagagattatacctgatggagctttgaagaaagaaagggcatagacagg 65  Q
    ||||||||||  ||||||||||||| ||| ||||||||||| || ||||| |||||||||||    
T  334 aaagattcaattgaagagattatacttgacggagctttgaaaaaggaaagagcatagacagg 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 6902 - 6963
Alignment:
Q  25 atacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattt 86  Q
    |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||||| ||||    
T  6902 atacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatattt 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 224057 - 224009
Alignment:
Q  6 agattcaagggaagagattatacctgatggagctttgaagaaagaaagg 54  Q
    ||||| ||||| ||| || |||||||| |||||||||||||||||||||    
T  224057 agattaaagggtagaaataatacctgagggagctttgaagaaagaaagg 224009  T

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