View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10065_low_1 (Length: 493)

Name: NF10065_low_1
Description: NF10065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10065_low_1
NF10065_low_1
[»] chr5 (31 HSPs)
chr5 (18-271)||(32500817-32501060)
chr5 (388-493)||(32500597-32500702)
chr5 (108-164)||(13296922-13296978)
chr5 (108-164)||(24346735-24346791)
chr5 (103-164)||(15480584-15480645)
chr5 (103-164)||(21306912-21306973)
chr5 (103-164)||(21314750-21314811)
chr5 (103-163)||(60112-60172)
chr5 (103-163)||(32908717-32908777)
chr5 (103-164)||(25258092-25258153)
chr5 (103-164)||(25321882-25321943)
chr5 (103-164)||(41666991-41667052)
chr5 (109-157)||(8287832-8287880)
chr5 (103-163)||(18333464-18333524)
chr5 (108-164)||(24270104-24270159)
chr5 (103-163)||(29239937-29239996)
chr5 (103-163)||(41666756-41666816)
chr5 (103-162)||(9368620-9368679)
chr5 (108-154)||(7369754-7369800)
chr5 (103-157)||(26137114-26137168)
chr5 (103-157)||(27132998-27133052)
chr5 (102-163)||(12034714-12034775)
chr5 (103-164)||(15480347-15480408)
chr5 (103-152)||(18333709-18333758)
chr5 (103-164)||(24269869-24269930)
chr5 (103-164)||(24346499-24346560)
chr5 (103-164)||(24528565-24528626)
chr5 (103-163)||(7092174-7092234)
chr5 (103-151)||(7607619-7607667)
chr5 (103-163)||(18140883-18140943)
chr5 (93-157)||(42295594-42295658)
[»] chr7 (30 HSPs)
chr7 (103-163)||(40746032-40746092)
chr7 (109-157)||(5871580-5871628)
chr7 (103-164)||(21821831-21821892)
chr7 (103-150)||(33834443-33834490)
chr7 (103-165)||(21054950-21055012)
chr7 (103-157)||(31257036-31257090)
chr7 (93-163)||(31892402-31892472)
chr7 (103-157)||(48417520-48417574)
chr7 (103-157)||(48661560-48661614)
chr7 (103-164)||(11743053-11743114)
chr7 (103-164)||(21861319-21861380)
chr7 (103-164)||(25620161-25620222)
chr7 (103-164)||(26239914-26239975)
chr7 (103-163)||(32474525-32474585)
chr7 (103-163)||(48243060-48243120)
chr7 (103-161)||(2544448-2544506)
chr7 (103-157)||(26562078-26562132)
chr7 (57-163)||(30727117-30727223)
chr7 (103-157)||(34027418-34027472)
chr7 (103-165)||(47710468-47710530)
chr7 (103-165)||(47722124-47722186)
chr7 (102-135)||(10420808-10420841)
chr7 (112-161)||(17202213-17202262)
chr7 (103-164)||(18825680-18825741)
chr7 (103-164)||(33996309-33996370)
chr7 (103-164)||(47849596-47849657)
chr7 (115-164)||(48243435-48243484)
chr7 (107-151)||(2937996-2938040)
chr7 (93-157)||(3392997-3393061)
chr7 (103-163)||(21822068-21822128)
[»] chr8 (31 HSPs)
chr8 (93-164)||(16962244-16962315)
chr8 (93-162)||(15686040-15686109)
chr8 (103-163)||(5931948-5932008)
chr8 (103-157)||(4828318-4828372)
chr8 (114-164)||(38476074-38476124)
chr8 (108-157)||(4963384-4963433)
chr8 (108-164)||(5932182-5932238)
chr8 (103-163)||(12547123-12547183)
chr8 (55-163)||(38476254-38476362)
chr8 (103-163)||(39960217-39960277)
chr8 (103-163)||(42846604-42846664)
chr8 (93-152)||(4828083-4828142)
chr8 (103-166)||(24075302-24075365)
chr8 (93-164)||(37001479-37001550)
chr8 (103-157)||(7267470-7267524)
chr8 (103-157)||(19256591-19256645)
chr8 (103-157)||(26800517-26800571)
chr8 (103-164)||(10884090-10884150)
chr8 (103-164)||(11232192-11232253)
chr8 (103-164)||(11232427-11232488)
chr8 (103-164)||(24532419-24532480)
chr8 (108-157)||(26208017-26208066)
chr8 (103-164)||(37868581-37868642)
chr8 (103-164)||(38475772-38475833)
chr8 (103-164)||(39052927-39052988)
chr8 (89-157)||(5590373-5590441)
chr8 (103-163)||(6541940-6542000)
chr8 (103-163)||(27204989-27205049)
chr8 (103-163)||(27205087-27205147)
chr8 (103-163)||(27205185-27205245)
chr8 (103-163)||(35682780-35682840)
[»] chr4 (35 HSPs)
chr4 (103-164)||(18528455-18528516)
chr4 (103-164)||(11036509-11036570)
chr4 (93-157)||(53814679-53814743)
chr4 (57-164)||(6666633-6666740)
chr4 (108-159)||(21750045-21750096)
chr4 (93-164)||(40726736-40726807)
chr4 (108-166)||(20822003-20822061)
chr4 (93-163)||(21685013-21685083)
chr4 (103-164)||(22231306-22231367)
chr4 (103-164)||(32002348-32002409)
chr4 (103-159)||(6666203-6666259)
chr4 (103-163)||(22845446-22845506)
chr4 (108-163)||(28073180-28073235)
chr4 (103-165)||(4645667-4645729)
chr4 (103-157)||(14783192-14783246)
chr4 (103-157)||(16066090-16066144)
chr4 (103-157)||(21498379-21498433)
chr4 (103-157)||(21498820-21498874)
chr4 (103-161)||(33107895-33107953)
chr4 (103-165)||(52559592-52559654)
chr4 (103-164)||(6218229-6218290)
chr4 (103-164)||(11036744-11036805)
chr4 (103-164)||(35609709-35609770)
chr4 (103-164)||(35788684-35788745)
chr4 (103-164)||(50543328-50543389)
chr4 (103-164)||(50543565-50543626)
chr4 (103-164)||(53828521-53828582)
chr4 (93-165)||(21041366-21041438)
chr4 (108-164)||(21750275-21750331)
chr4 (103-163)||(22827563-22827623)
chr4 (103-163)||(22863499-22863559)
chr4 (109-157)||(25052883-25052931)
chr4 (103-163)||(35788919-35788979)
chr4 (103-163)||(39902562-39902622)
chr4 (58-126)||(50858988-50859056)
[»] chr3 (41 HSPs)
chr3 (103-164)||(20303062-20303123)
chr3 (103-164)||(8018993-8019054)
chr3 (97-157)||(13741106-13741166)
chr3 (108-164)||(16239621-16239677)
chr3 (103-163)||(34610586-34610646)
chr3 (103-166)||(24866222-24866285)
chr3 (109-164)||(33640076-33640131)
chr3 (93-164)||(54567907-54567978)
chr3 (105-163)||(389634-389692)
chr3 (103-153)||(1800240-1800290)
chr3 (103-161)||(20327615-20327673)
chr3 (93-163)||(35038193-35038263)
chr3 (103-164)||(1723074-1723135)
chr3 (103-164)||(23708222-23708283)
chr3 (103-164)||(23726678-23726739)
chr3 (103-164)||(23745134-23745195)
chr3 (103-164)||(24063659-24063720)
chr3 (103-164)||(26272322-26272383)
chr3 (103-164)||(28087213-28087274)
chr3 (103-164)||(31317253-31317314)
chr3 (103-164)||(45138969-45139030)
chr3 (103-164)||(54368541-54368602)
chr3 (93-157)||(13574926-13574990)
chr3 (59-163)||(44576254-44576358)
chr3 (109-161)||(49629636-49629688)
chr3 (93-164)||(3975356-3975427)
chr3 (89-164)||(22729111-22729186)
chr3 (103-157)||(11589810-11589864)
chr3 (94-154)||(27783213-27783270)
chr3 (93-163)||(31317481-31317551)
chr3 (103-152)||(1353473-1353522)
chr3 (103-164)||(4155349-4155410)
chr3 (108-157)||(13574689-13574738)
chr3 (103-164)||(23691422-23691483)
chr3 (103-164)||(39269356-39269417)
chr3 (103-164)||(45828044-45828105)
chr3 (103-163)||(2806285-2806345)
chr3 (103-163)||(7697397-7697457)
chr3 (108-164)||(12930126-12930182)
chr3 (103-151)||(20327860-20327908)
chr3 (121-161)||(27491396-27491436)
[»] chr2 (31 HSPs)
chr2 (103-161)||(37769944-37770002)
chr2 (103-164)||(37840362-37840423)
chr2 (109-164)||(21383668-21383723)
chr2 (103-161)||(2324265-2324323)
chr2 (103-157)||(33606060-33606113)
chr2 (103-164)||(15124781-15124842)
chr2 (110-163)||(17719598-17719651)
chr2 (103-164)||(40379442-40379503)
chr2 (103-163)||(13764315-13764375)
chr2 (103-163)||(16419527-16419587)
chr2 (93-157)||(19191615-19191679)
chr2 (103-163)||(40379208-40379268)
chr2 (93-164)||(14466408-14466479)
chr2 (103-161)||(1926442-1926500)
chr2 (109-163)||(15124547-15124601)
chr2 (103-165)||(15460999-15461061)
chr2 (96-162)||(17525099-17525165)
chr2 (103-157)||(17854934-17854988)
chr2 (109-163)||(31700744-31700798)
chr2 (103-161)||(40718208-40718266)
chr2 (103-164)||(2029794-2029855)
chr2 (103-164)||(2030029-2030090)
chr2 (103-164)||(10570995-10571056)
chr2 (103-164)||(17719425-17719486)
chr2 (103-164)||(28407791-28407852)
chr2 (103-164)||(36352157-36352218)
chr2 (103-152)||(42639624-42639673)
chr2 (103-163)||(5711438-5711498)
chr2 (113-161)||(15451450-15451498)
chr2 (108-164)||(16419297-16419353)
chr2 (108-164)||(27897604-27897660)
[»] scaffold0481 (1 HSPs)
scaffold0481 (93-157)||(3476-3540)
[»] chr6 (26 HSPs)
chr6 (103-163)||(9705279-9705339)
chr6 (93-157)||(27656473-27656537)
chr6 (108-163)||(19712982-19713037)
chr6 (103-157)||(8566964-8567018)
chr6 (103-164)||(4868811-4868872)
chr6 (103-164)||(33494564-33494625)
chr6 (103-163)||(4868576-4868636)
chr6 (103-163)||(6054428-6054488)
chr6 (93-157)||(27653232-27653296)
chr6 (103-162)||(30256603-30256662)
chr6 (93-163)||(2736166-2736236)
chr6 (103-157)||(6542948-6543002)
chr6 (103-157)||(8026414-8026468)
chr6 (103-157)||(8026629-8026683)
chr6 (93-163)||(13740931-13741001)
chr6 (93-163)||(13746431-13746501)
chr6 (103-157)||(30256837-30256891)
chr6 (103-164)||(6400618-6400679)
chr6 (103-164)||(9705045-9705106)
chr6 (103-164)||(11721930-11721991)
chr6 (103-164)||(13353226-13353287)
chr6 (108-157)||(15082149-15082198)
chr6 (103-164)||(33796351-33796412)
chr6 (103-163)||(17147659-17147719)
chr6 (93-165)||(19639110-19639182)
chr6 (103-163)||(25065093-25065153)
[»] chr1 (25 HSPs)
chr1 (108-164)||(16162963-16163019)
chr1 (103-163)||(41066964-41067024)
chr1 (113-164)||(4098161-4098212)
chr1 (103-163)||(16163192-16163254)
chr1 (103-157)||(3169791-3169845)
chr1 (103-164)||(4113004-4113065)
chr1 (103-164)||(17452826-17452887)
chr1 (103-164)||(33156758-33156819)
chr1 (108-164)||(25255341-25255397)
chr1 (103-163)||(40079177-40079237)
chr1 (124-166)||(7653522-7653564)
chr1 (103-157)||(17452684-17452738)
chr1 (103-157)||(25137308-25137362)
chr1 (103-165)||(25145482-25145544)
chr1 (103-157)||(38080629-38080683)
chr1 (103-149)||(39348365-39348411)
chr1 (103-157)||(51589017-51589071)
chr1 (103-157)||(51590063-51590117)
chr1 (108-161)||(11924951-11925004)
chr1 (103-164)||(26176933-26176994)
chr1 (103-164)||(31432228-31432289)
chr1 (103-164)||(35772054-35772115)
chr1 (108-164)||(35892321-35892377)
chr1 (103-163)||(41035826-41035886)
chr1 (103-163)||(52650770-52650830)
[»] scaffold0048 (1 HSPs)
scaffold0048 (115-163)||(82113-82161)
[»] scaffold0129 (1 HSPs)
scaffold0129 (93-152)||(14318-14377)
[»] scaffold0045 (1 HSPs)
scaffold0045 (110-161)||(40971-41022)
[»] scaffold0005 (1 HSPs)
scaffold0005 (103-157)||(56484-56538)
[»] scaffold0519 (2 HSPs)
scaffold0519 (103-164)||(1941-2002)
scaffold0519 (103-163)||(2176-2236)
[»] scaffold0092 (1 HSPs)
scaffold0092 (115-164)||(5692-5741)
[»] scaffold0047 (1 HSPs)
scaffold0047 (103-164)||(12672-12733)
[»] scaffold0181 (1 HSPs)
scaffold0181 (103-163)||(20964-21024)
[»] scaffold0024 (1 HSPs)
scaffold0024 (93-165)||(89550-89622)


Alignment Details
Target: chr5 (Bit Score: 170; Significance: 5e-91; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 32501060 - 32500817
Alignment:
Q  18 ccaagatccatggttgtgagagggtgagttaaataggcccacatcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcaca 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32501060 ccaagatccatggttgtgagagggtgagttaaatagtcccacattggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcaaa 32500961  T
Q  118 aaccggttttgtgggattttgttagacccaaccacaatttttaagatatctctgaaaaaggcagcatatgctcatgaacttgggaataagcgtatgatag 217  Q
    ||||||||||||          ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  32500960 aaccggttttgt----------tagacccaaccacaatttttaagatatctttgaaaaaggcggcatatgctcatgaacttgggaataagcgtatgatag 32500871  T
Q  218 cgccactttgcctnnnnnnntgagcaacaatatttgcttgtcttcgaataaaac 271  Q
    |||||||||||||       ||||||||||||||||||| ||| ||||||||||    
T  32500870 cgccactttgcctaaaaaaatgagcaacaatatttgcttatctccgaataaaac 32500817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 388 - 493
Target Start/End: Complemental strand, 32500702 - 32500597
Alignment:
Q  388 ttatgtatgtcctaaatcacttgcttataattgagttcaatatacacctgtgataaactcatgttaccaagttaaatgattgtctcctctaagccctgtg 487  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32500702 ttatgtatgtcctaaatcacttgcttatagctgagttcaatatacacccgtgataaactcatgttaccaagctaaatgattgtctcctctaagccctgtg 32500603  T
Q  488 cctttg 493  Q
    ||||||    
T  32500602 cctttg 32500597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 13296922 - 13296978
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  13296922 tcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 24346791 - 24346735
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||||||||||| || |||||||||||||||| |||||||||||    
T  24346791 tcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagat 24346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 15480584 - 15480645
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||    
T  15480584 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 15480645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 21306912 - 21306973
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||| |||||||||| |||||||||||||||| |||| ||||||    
T  21306912 aatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 21314750 - 21314811
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||| |||||||||| |||||||||||||||| |||| ||||||    
T  21314750 aatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21314811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 60112 - 60172
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||| |||||||| |||||    
T  60112 aatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaaga 60172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 32908777 - 32908717
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||||||||||||| ||| || |||||||||||||||| |||| |||||    
T  32908777 aatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaaga 32908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 25258153 - 25258092
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  25258153 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 25321943 - 25321882
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  25321943 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 41667052 - 41666991
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  41667052 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 41666991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 8287832 - 8287880
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  8287832 cacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 8287880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 18333524 - 18333464
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||||| || |||||    
T  18333524 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 24270159 - 24270104
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||||||||||| || ||||||| |||||||| |||||||||||    
T  24270159 tcacctcacaagccggttttgtggggttgtgttaga-ccaaccacgatttttaagat 24270104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 29239937 - 29239996
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||||  ||||||||||| || ||||||||||||||||||||| |||||    
T  29239937 aatcatcacctcacaaat-ggttttgtgggtttgtgttagacccaaccacaatttctaaga 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 41666816 - 41666756
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  41666816 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 9368620 - 9368679
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaag 162  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||||| ||||| ||||    
T  9368620 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaag 9368679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 7369754 - 7369800
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaa 154  Q
    ||||||||||| ||||||||||||| || |||||| |||||||||||    
T  7369754 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacaa 7369800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 26137168 - 26137114
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||| ||||||||||||||||||||| || ||||||||| |||||| ||||    
T  26137168 aatcctcatctcacaaaccggttttgtggggttatgttagacctaaccacgattt 26137114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 27133052 - 27132998
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  27133052 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 27132998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 12034714 - 12034775
Alignment:
Q  102 aaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||| ||||||||||| || ||||||| ||||| |||||| ||||||||| |||| |||||    
T  12034714 aaatcctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 15480347 - 15480408
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| | ||||||||||| || |||||| ||||||||| |||| ||||||    
T  15480347 aatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagat 15480408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 18333758 - 18333709
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccac 152  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||||||    
T  18333758 aatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccac 18333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 24269930 - 24269869
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||| |||| || |||||| | |||||||||||| ||||||    
T  24269930 aatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 24346560 - 24346499
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||| |||| || |||||| | |||||||||||| ||||||    
T  24346560 aatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 24528565 - 24528626
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||  |||| ||||||    
T  24528565 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 24528626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 7092174 - 7092234
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| || |||||||||| || |||||| ||||||| |||| |||||||    
T  7092174 aatcctcacctcacaagccagttttgtggggttgtgttaggcccaacctcaatgtttaaga 7092234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 7607619 - 7607667
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaacca 151  Q
    |||||||||||||||| ||||||||||||  || |||||| ||||||||    
T  7607619 aatcttcacctcacaagccggttttgtggagttgtgttaggcccaacca 7607667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 18140883 - 18140943
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||| |||||||| |||||| ||||||| | |||||||||||||| |||| |||||    
T  18140883 aatcctcacttcacaaactggttttatgggattgtattagacccaaccacgatttctaaga 18140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 42295594 - 42295658
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||||  |||| ||||||||||| ||||||||||||  || |||||| |||||| |||||||    
T  42295594 aagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaattt 42295658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 40746092 - 40746032
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  40746092 aatcttcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaaga 40746032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 5871628 - 5871580
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  5871628 cacctcacaagccggttttgtgggattttgttagacccaaccgcaattt 5871580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 21821831 - 21821892
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||| ||||||||||| |||||||||||| |||||| ||||||||| |||| ||||||    
T  21821831 aatcttcatctcacaaaccgattttgtgggattgtgttaggcccaaccacgatttctaagat 21821892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 33834443 - 33834490
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaacc 150  Q
    |||||||||||||||| ||||||||||||| || ||||||||||||||    
T  33834443 aatcttcacctcacaagccggttttgtgggtttgtgttagacccaacc 33834490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 21055012 - 21054950
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||||    
T  21055012 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagata 21054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 31257090 - 31257036
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||    
T  31257090 aatcttcacctcacaaaccagttttgtggggttgtgttagactcaaccacgattt 31257036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 31892402 - 31892472
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||| | |||||||||||||||| |||||||||||||  | |||||| ||||||||| |||| |||||    
T  31892402 aagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaaga 31892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 48417574 - 48417520
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||| |||||||||||| |||||||||| || |||||| ||||||||||||||    
T  48417574 aatcttgacctcacaaaccagttttgtggggttgtgttaggcccaaccacaattt 48417520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 48661614 - 48661560
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||| |||| |||||||||||||||| ||||    
T  48661614 aatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgattt 48661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 11743053 - 11743114
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||| ||||||||||||||||||| ||| ||||||||  |||||| |||||||||||    
T  11743053 aatcatcacatcacaaaccggttttgtggaattgtgttagacttaaccacgatttttaagat 11743114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 21861319 - 21861380
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| |||||||||||||||| |||||| ||||||||| |||| ||||||    
T  21861319 aatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagat 21861380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 25620161 - 25620222
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  25620161 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25620222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 26239975 - 26239914
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||||||  |||| ||||||| || ||||||||||||||||||||| ||||||    
T  26239975 aatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagat 26239914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 32474525 - 32474585
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| ||  ||||| |||||||||||||| |||||    
T  32474525 aatcctcacctcacaagccggttttgtgggtttgcgttaggcccaaccacaatttctaaga 32474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 48243120 - 48243060
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  48243120 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 2544506 - 2544448
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||| |||||||||||  |||||||||||| || |||||| ||||||||| ||||||||    
T  2544506 aatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaa 2544448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 26562132 - 26562078
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||||||||| ||||||||||||| || |||||| | ||||||| ||||    
T  26562132 aatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccattt 26562078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 30727223 - 30727117
Alignment:
Q  57 cacatcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatt 156  Q
    ||||||||||||||||||| | |||| | || ||| |||||||   |||| ||||||||||| | ||||||||  | ||  ||||| |||||||||||||    
T  30727223 cacatcggttgagaaatggccagaataagtgtttataagtgggggcaatcctcacctcacaagctggttttgtacggttaagttaggcccaaccacaatt 30727124  T
Q  157 tttaaga 163  Q
    | |||||    
T  30727123 tctaaga 30727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 34027418 - 34027472
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  34027418 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 34027472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 47710468 - 47710530
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| ||||||||||| || |||||||||| || |||||| ||||||||| |||| |||||||    
T  47710468 aatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagata 47710530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 47722124 - 47722186
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| ||||||||||| || |||||||||| || |||||| ||||||||| |||| |||||||    
T  47722124 aatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagata 47722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 10420841 - 10420808
Alignment:
Q  102 aaatcttcacctcacaaaccggttttgtgggatt 135  Q
    |||||||||| |||||||||||||||||||||||    
T  10420841 aaatcttcacttcacaaaccggttttgtgggatt 10420808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 17202213 - 17202262
Alignment:
Q  112 ctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    ||||||| ||||||||||||| || |||||| ||||||||| ||||||||    
T  17202213 ctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaa 17202262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 18825741 - 18825680
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||| |||| ||| || |||||||||||| ||||| || |||||||||||||||||||    
T  18825741 aatcctcaactcaaaaatcgattttgtgggattatgttaaactcaaccacaatttttaagat 18825680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 33996370 - 33996309
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||||||||  |||||||||||  || |||||| ||||||||| |||| ||||||    
T  33996370 aatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagat 33996309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 47849596 - 47849657
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| | |||||||||  ||||||||    
T  47849596 aatcctcacctcacaacccggttttgtgggcttgtgttaggctcaaccacaaagtttaagat 47849657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 48243484 - 48243435
Alignment:
Q  115 acaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||||| || |||||||||||||||  |||||||||||    
T  48243484 acaagccggttttgtggggttgtgttagacccaaccatgatttttaagat 48243435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 2937996 - 2938040
Alignment:
Q  107 ttcacctcacaaaccggttttgtgggattttgttagacccaacca 151  Q
    |||||||||||| |||||| ||||||||| ||||||| |||||||    
T  2937996 ttcacctcacaagccggttgtgtgggattgtgttagaaccaacca 2938040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 3392997 - 3393061
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||| |||||  ||||||||||| ||| ||||||||| || |||||| ||||||||| ||||    
T  3392997 aagtggggaaaattctcacctcacaagccgattttgtggggttgtgttaggcccaaccaccattt 3393061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 21822068 - 21822128
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||| ||||||| | | ||||||||| || ||||||||||||||||||||| |||||    
T  21822068 aatcctcatctcacaagcagattttgtgggtttgtgttagacccaaccacaatttctaaga 21822128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 16962315 - 16962244
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  16962315 aagtgggaacaattctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaatttttaagat 16962244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 15686109 - 15686040
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaag 162  Q
    |||||||||||||  ||||||||||| |||||||||||||||| |||||||| ||||||| |||| ||||    
T  15686109 aagtgggaaaaattctcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaag 15686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 5932008 - 5931948
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||||||||    
T  5932008 aatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaaga 5931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 4828318 - 4828372
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  4828318 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 4828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 38476074 - 38476124
Alignment:
Q  114 cacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| ||||||    
T  38476074 cacaagccggttttgtgggattatgttaggcccaaccacaatttctaagat 38476124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 4963384 - 4963433
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  4963384 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 4963433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 5932238 - 5932182
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| || |||||||||| || |||||| ||||||||| |||||||||||    
T  5932238 tcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagat 5932182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 12547123 - 12547183
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||||||||||| ||||||||||||| || |||||| |||||| || |||| |||||    
T  12547123 aatcttcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 12547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 38476254 - 38476362
Alignment:
Q  55 cccacatcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaa 154  Q
    |||||||| ||||||| |||| |||||| | || ||| |||||||  ||||| ||||||||||| ||| ||||||||| || ||||||  | ||||||||    
T  38476254 cccacatcagttgagagatggcctgaataagtgtttataagtgggggaaatcctcacctcacaagccgattttgtggggttgtgttaggactaaccacaa 38476353  T
Q  155 tttttaaga 163  Q
     || |||||    
T  38476354 attctaaga 38476362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 39960217 - 39960277
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  39960217 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 42846664 - 42846604
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  42846664 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 4828083 - 4828142
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccac 152  Q
    ||||||| | |||| ||||||||||| ||||||||||||| || |||||| |||||||||    
T  4828083 aagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 4828142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 24075365 - 24075302
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagatat 166  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||| ||||    
T  24075365 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatat 24075302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 37001479 - 37001550
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||| | |||| |||| |||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  37001479 aagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 37001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 7267524 - 7267470
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| |||||||||| || || |||||||||||||||| ||||    
T  7267524 aatcatcacctcacaagccggttttgtagggttgtgttagacccaaccaccattt 7267470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 19256645 - 19256591
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  19256645 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 19256591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 26800571 - 26800517
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||| ||||| ||||||||||||| || |||||| ||||||||||||||    
T  26800571 aatcctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaattt 26800517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 10884090 - 10884150
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  10884090 aatcctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagat 10884150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 11232253 - 11232192
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  11232253 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 11232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 11232488 - 11232427
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  11232488 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 11232427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 24532480 - 24532419
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||  |||| ||||||    
T  24532480 aatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 24532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 26208066 - 26208017
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||| || ||||||||||||| || |||||| ||||||||||||||    
T  26208066 tcacctcataagccggttttgtggggttatgttaggcccaaccacaattt 26208017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 37868642 - 37868581
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| | |||||||||| ||| |||||| || |||||| |||||||||||    
T  37868642 aatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagat 37868581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 38475772 - 38475833
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||||| || || |||||| ||||||||||| || ||||||    
T  38475772 aatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaagat 38475833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 39052988 - 39052927
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||| || |||| ||||||    
T  39052988 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagat 39052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 5590441 - 5590373
Alignment:
Q  89 ttacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||||   |||| |||| |||||| ||||||||||| | || |||||| ||||||||||||||    
T  5590441 ttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaattt 5590373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 6541940 - 6542000
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||| ||| || |||||    
T  6541940 aatcctcacctcacaagccggttttgtgggtttgtgttaggcccaaccgcaaattctaaga 6542000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 27204989 - 27205049
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||| |||| |||||    
T  27204989 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 27205087 - 27205147
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||| |||| |||||    
T  27205087 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 27205185 - 27205245
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||| |||| |||||    
T  27205185 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 35682840 - 35682780
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||| ||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  35682840 aatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 18528516 - 18528455
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  18528516 aatcctcacctcacaaatcggttttgtgagattttgttagacccaaccacgatttctaagat 18528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 11036570 - 11036509
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||| ||||||    
T  11036570 aatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaagat 11036509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 53814743 - 53814679
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||| | |||| ||||||||||| |||||||||||||||| |||||| ||||||||| ||||    
T  53814743 aagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgattt 53814679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 6666740 - 6666633
Alignment:
Q  57 cacatcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatt 156  Q
    ||||| ||||| || ||||||||||  | || || ||||||||   |||| | |||||||||||||||||||||||||| | |||| ||||||||| |||    
T  6666740 cacattggttgggagatggtctgaacaagtgttttcaagtgggggcaatccttacctcacaaaccggttttgtgggattgttttaggcccaaccacgatt 6666641  T
Q  157 tttaagat 164  Q
    | ||||||    
T  6666640 tctaagat 6666633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 21750096 - 21750045
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaattttt 159  Q
    ||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  21750096 tcacctcacaagccggttttgtggggttatgttagactcaaccacaattttt 21750045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 40726736 - 40726807
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||  ||||| ||||||||||| |||||||||| ||||| |||||| ||||||||| |||| ||||||    
T  40726736 aagtgggggaaatcctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagat 40726807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 20822003 - 20822061
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagatat 166  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||| |||| ||| ||||    
T  20822003 tcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaatatat 20822061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 21685013 - 21685083
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||| ||||| ||||||||||| ||| ||||||||| || |||||  |||||||||||||| |||||    
T  21685013 aagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagcccaaccacaatttctaaga 21685083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 22231367 - 22231306
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  22231367 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 22231306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 32002348 - 32002409
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||| |||||||||| | || | |||||||||| |||||||||||||||    
T  32002348 aatcttcaccttacaaatcggttttgtgaggttgtattagacccaaacacaatttttaagat 32002409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 6666259 - 6666203
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattttt 159  Q
    |||| ||||||||||||| ||||||||||| || ||||||| | |||||||||||||    
T  6666259 aatcctcacctcacaaacaggttttgtggggttgtgttagatcaaaccacaattttt 6666203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 22845506 - 22845446
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  22845506 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 28073235 - 28073180
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||||| | ||||||||||| || |||||| |||||||||||||| |||||    
T  28073235 tcacctcacaagctggttttgtggggttgtgttaggcccaaccacaatttctaaga 28073180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 4645667 - 4645729
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| |||||| |||| |||||||||||||||| |||||||| ||||||  |||| |||||||    
T  4645667 aatcatcaccttacaagccggttttgtgggattgtgttagactcaaccatgatttataagata 4645729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 14783246 - 14783192
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  14783246 aatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 14783192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 16066090 - 16066144
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||||| |||||||| ||||| |||||| ||||||||| ||||    
T  16066090 aatcctcacctcacaaactggttttgtaggattgtgttaggcccaaccaccattt 16066144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 21498379 - 21498433
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  21498379 aatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgattt 21498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 21498820 - 21498874
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  21498820 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 21498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 33107895 - 33107953
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||||||||||||||| |  ||||||| ||||| ||||| |||||||||| ||||||||    
T  33107895 aatcttcacctcacaagcaagttttgtaggattatgttaaacccaaccacgatttttaa 33107953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 52559592 - 52559654
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||  |||| |||||||    
T  52559592 aatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagata 52559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 6218229 - 6218290
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||||||||  |||||||||||  || |||||||| ||||||| |||| ||||||    
T  6218229 aatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagat 6218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 11036805 - 11036744
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||| || |||||| || |||||| || ||||||||||||||||||    
T  11036805 aatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagat 11036744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 35609770 - 35609709
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || ||| |||||||||||  |||| ||||||    
T  35609770 aatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagat 35609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 35788684 - 35788745
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||| |||| || |||||| ||||||||| |||| ||||||    
T  35788684 aatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagat 35788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 50543389 - 50543328
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||| ||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  50543389 aatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 50543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 50543626 - 50543565
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||  || |||||| ||||||||| |||| ||||||    
T  50543626 aatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagat 50543565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 53828582 - 53828521
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||| || ||| ||||||||| || |||||| |||||||||||||| ||||||    
T  53828582 aatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagat 53828521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 21041366 - 21041438
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    ||||||| |||||| ||||||||||||||||||||| |   || |||||| | ||||||||| || |||||||    
T  21041366 aagtggggaaaatcctcacctcacaaaccggttttgcgaagttatgttaggcacaaccacaaattctaagata 21041438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 21750331 - 21750275
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||||| |||||||| | || |||||||||||| ||| | |||||||||    
T  21750331 tcacctcacaaaccagttttgtgaggttgtgttagacccaatcacgaattttaagat 21750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 22827563 - 22827623
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| |||||||||| || || |||||| ||||||||| |||| |||||    
T  22827563 aatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 22863499 - 22863559
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||| ||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  22863499 aatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 25052883 - 25052931
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  25052883 cacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 25052931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 35788919 - 35788979
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||| ||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  35788919 aatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 39902622 - 39902562
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| | ||||||||||| || |||||| ||||||||| |||| |||||    
T  39902622 aatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 50858988 - 50859056
Alignment:
Q  58 acatcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcacaaaccggttt 126  Q
    ||||||||||||| |||| |||||| | || ||| |||||||  ||||| ||||||||||| |||||||    
T  50858988 acatcggttgagagatggcctgaataagtgtttataagtgggtgaaatcctcacctcacaagccggttt 50859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 20303123 - 20303062
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||    
T  20303123 aatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgatttttaagat 20303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 8018993 - 8019054
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||    
T  8018993 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 13741166 - 13741106
Alignment:
Q  97 gggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||| ||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  13741166 gggacaaatcctcacctcacaagccggttttttggggttgtgttagacccaaccacaattt 13741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 16239621 - 16239677
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||| |||| ||||||    
T  16239621 tcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagat 16239677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 34610586 - 34610646
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||||||||  |||||||||||| || ||||||||||||||||||||| |||||    
T  34610586 aatcctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaatttctaaga 34610646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 24866222 - 24866285
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagatat 166  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||||    
T  24866222 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatat 24866285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 33640076 - 33640131
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||| |||||||||||||||| |||||| ||||| |||||||| ||||||    
T  33640076 cacctcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagat 33640131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 54567907 - 54567978
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||  ||||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  54567907 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 54567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 389692 - 389634
Alignment:
Q  105 tcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||| ||||||| |||||||||||||||| |||||  | ||||||||||||||||||    
T  389692 tcttcatctcacaagccggttttgtgggattgtgttatgctcaaccacaatttttaaga 389634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 1800240 - 1800290
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccaca 153  Q
    |||| ||||||||||||||||||||||||| || ||| |||||||||||||    
T  1800240 aatcctcacctcacaaaccggttttgtggggttgtgtaagacccaaccaca 1800290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 20327673 - 20327615
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||||||    
T  20327673 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaa 20327615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 35038263 - 35038193
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||  ||||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  35038263 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 1723135 - 1723074
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  1723135 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 1723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 23708283 - 23708222
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||| |||| ||||||  |||| |||||||||||||||    
T  23708283 aatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagat 23708222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 23726739 - 23726678
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||| |||| ||||||  |||| |||||||||||||||    
T  23726739 aatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagat 23726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 23745195 - 23745134
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||| |||| ||||||  |||| |||||||||||||||    
T  23745195 aatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagat 23745134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 24063720 - 24063659
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||| |||| ||||||  |||| |||||||||||||||    
T  24063720 aatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagat 24063659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 26272383 - 26272322
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| | | ||||||||| || ||||||||||||||||||||| ||||||    
T  26272383 aatcgtcacctcacaagctgattttgtggggttgtgttagacccaaccacaatttctaagat 26272322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 28087274 - 28087213
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||||||||||| ||| |||||||| ||| |||| ||||||    
T  28087274 aatcatcacctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagat 28087213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 31317253 - 31317314
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||||||||||| |||||| | ||||||| |||| ||||||    
T  31317253 aatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagat 31317314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 45139030 - 45138969
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || ||| |||||||||||| |||| ||||||    
T  45139030 aatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagat 45138969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 54368541 - 54368602
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||||||| |||| ||||||    
T  54368541 aatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagat 54368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 13574990 - 13574926
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||  ||||| ||||||||||| || |||||||||| || |||||| ||||||||||||||    
T  13574990 aagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaattt 13574926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 44576358 - 44576254
Alignment:
Q  59 catcggttgagaaatggtctgaatcaatgattacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttt 158  Q
    |||| ||||||| |||| |||||| |||| ||| ||||| |  |||||  | || ||||||||||||||||||| || ||||| |||||||||| ||||     
T  44576358 catcagttgagagatggcctgaataaatgtttataagtgtgggaaatccgcgccgcacaaaccggttttgtgggtttgtgttacacccaaccacgatttc 44576259  T
Q  159 taaga 163  Q
    |||||    
T  44576258 taaga 44576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 49629636 - 49629688
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||||||||||||||||||||||| || ||||||||||||  || ||||||||    
T  49629636 cacctcacaaaccggttttgtggggttgtgttagacccaattaccatttttaa 49629688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 3975427 - 3975356
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||| | |||| ||||||| ||| ||| |||||||| ||| |||||||||||||||| |||| ||||||    
T  3975427 aagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaagat 3975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 22729111 - 22729186
Alignment:
Q  89 ttacaagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||   |||| |||| |||||| ||||||||||| | || |||||| |||||||||||||| ||||||    
T  22729111 ttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagat 22729186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 11589810 - 11589864
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  11589810 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 11589864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 27783213 - 27783270
Alignment:
Q  94 agtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaa 154  Q
    |||||| ||||||||||||||| ||   ||||||||||| || ||||||||||||||||||    
T  27783213 agtggggaaaatcttcacctcataa---ggttttgtggggttgtgttagacccaaccacaa 27783270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 31317481 - 31317551
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||| |||||| ||||||||||| ||| ||||| ||| || |||||| ||||||||| |||| |||||    
T  31317481 aagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 1353473 - 1353522
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccac 152  Q
    |||| |||||| |||||||||||||||||| || |||||| |||||||||    
T  1353473 aatcatcaccttacaaaccggttttgtggggttgtgttaggcccaaccac 1353522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 4155349 - 4155410
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  4155349 aatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4155410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 13574738 - 13574689
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  13574738 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 13574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 23691483 - 23691422
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||| |||||| |||| ||||||  |||| |||||||||||||||    
T  23691483 aatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatttttaagat 23691422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 39269356 - 39269417
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||| |||||| |||||| || ||| || |||||||||||    
T  39269356 aatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagat 39269417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 45828044 - 45828105
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||| | || |||||| ||| |||||||||| ||||||    
T  45828044 aatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagat 45828105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 2806345 - 2806285
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| || |||||||||| ||||||||| ||| | |||||||| |||||    
T  2806345 aatcctcacctcacaagccagttttgtggggttttgttaggccccaacacaatttctaaga 2806285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 7697457 - 7697397
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| | ||||||||||| || |||||| || ||||||||||| |||||    
T  7697457 aatcatcacctcacaagctggttttgtggggttgtgttaggcctaaccacaatttctaaga 7697397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 12930182 - 12930126
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  12930182 tcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 12930126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 20327908 - 20327860
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaacca 151  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||    
T  20327908 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 20327860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 27491436 - 27491396
Alignment:
Q  121 cggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  27491436 cggttttgtaggattgtgttagactcaaccacaatttttaa 27491396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 37770002 - 37769944
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    ||||||||||||| || ||||||||||||| || |||||||||||||||| ||||||||    
T  37770002 aatcttcacctcataagccggttttgtggggttgtgttagacccaaccacgatttttaa 37769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 37840362 - 37840423
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||    
T  37840362 aatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaagat 37840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 21383723 - 21383668
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||||||||||||||||||  ||||| ||||||||| |||| ||||||    
T  21383723 cacctcacaaaccggttttgtgggattgagttaggcccaaccacgatttctaagat 21383668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 2324265 - 2324323
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||||||    
T  2324265 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaa 2324323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 33606113 - 33606060
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  33606113 aatcctcacctcacaaaccggttttgt-ggaatttgttagacccaaccacgattt 33606060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 15124842 - 15124781
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||| ||||||  |||||||||||| || |||||||||||||||| |||| ||||||    
T  15124842 aatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagat 15124781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 17719598 - 17719651
Alignment:
Q  110 acctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||||||||||||||||| || |||||| ||||||||| |||| |||||    
T  17719598 acctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 40379503 - 40379442
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  40379503 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 40379442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 13764375 - 13764315
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||||| ||||||||||||| || |||| |||||||| ||||||| |||| |||||    
T  13764375 aatcttcaccttacaaaccggttttatgagattctgttagactcaaccacgatttctaaga 13764315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 16419527 - 16419587
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  16419527 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 19191679 - 19191615
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||| | |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  19191679 aagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 19191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 40379268 - 40379208
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  40379268 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 14466479 - 14466408
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||  |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  14466479 aagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 14466408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 1926500 - 1926442
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||| |||||||||||| ||||||||| ||||| |||||| | ||||||| ||||||||    
T  1926500 aatcctcacctcacaaatcggttttgtaggattgtgttaggctcaaccacgatttttaa 1926442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 15124601 - 15124547
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||| || ||| ||||||||| || |||||||||||||||| ||||||||||    
T  15124601 cacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaaga 15124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 15460999 - 15461061
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| |||||||||||  | |||||||||| || |||||||| |||||| |||||||||||||    
T  15460999 aatcatcacctcacaagacagttttgtggggttgtgttagactcaaccataatttttaagata 15461061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 17525165 - 17525099
Alignment:
Q  96 tgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaag 162  Q
    |||||| |||| ||||| ||||| |||||||||||| ||| ||| || |||||||||||||| ||||    
T  17525165 tgggaagaatcctcaccgcacaagccggttttgtggaattgtgtcaggcccaaccacaatttctaag 17525099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 17854988 - 17854934
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || || ||||||||||||| ||||    
T  17854988 aatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgattt 17854934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 31700798 - 31700744
Alignment:
Q  109 cacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  31700798 cacctcacaagccggttttgtgggtttgtgttaggcccaaccacgatttctaaga 31700744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 40718266 - 40718208
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||| ||||||||||||||||||||||||  || |||||| ||||||||  ||||||||    
T  40718266 aatcatcacctcacaaaccggttttgtggagttgtgttaggcccaaccatcatttttaa 40718208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 2029794 - 2029855
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || | |||| ||||||||| |||| ||||||    
T  2029794 aatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagat 2029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 2030029 - 2030090
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || | |||| ||||||||| |||| ||||||    
T  2030029 aatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagat 2030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 10570995 - 10571056
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| |||| ||||||||||||| || |||||| | ||||||| |||| ||||||    
T  10570995 aatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaagat 10571056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 17719425 - 17719486
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| |||||||||| || || |||| | |||||||||||||| ||||||    
T  17719425 aatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagat 17719486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 28407852 - 28407791
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||  || |||||| ||||||||| |||| ||||||    
T  28407852 aatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagat 28407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 36352218 - 36352157
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||| || ||||||||||||| || ||||||   |||||||||||||||||||    
T  36352218 aatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagat 36352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 42639673 - 42639624
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccac 152  Q
    |||| ||||||||||| | ||||||||||| || ||||||||||||||||    
T  42639673 aatcgtcacctcacaagctggttttgtggggttgtgttagacccaaccac 42639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 5711498 - 5711438
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  5711498 aatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 15451498 - 15451450
Alignment:
Q  113 tcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||||| ||| |||||||||||| || ||| ||||||||||||||||||    
T  15451498 tcacaagccgattttgtgggattgtggtaggcccaaccacaatttttaa 15451450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 16419297 - 16419353
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||||||||||| || | |||| ||||||||| |||| ||||||    
T  16419297 tcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagat 16419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 27897660 - 27897604
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||  |||||||||||| || |||||| ||||||||| |||| ||||||    
T  27897660 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagat 27897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 3540 - 3476
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||| | |||||||||||||||| ||||||||||||| || |||||||||||| ||| ||||    
T  3540 aagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgattt 3476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 9705279 - 9705339
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||||||| |||| |||||    
T  9705279 aatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 27656473 - 27656537
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||  ||||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  27656473 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 27656537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 19712982 - 19713037
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||    
T  19712982 tcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaaga 19713037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 8567018 - 8566964
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||||||| ||||    
T  8567018 aatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgattt 8566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 4868872 - 4868811
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  4868872 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4868811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 33494564 - 33494625
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  33494564 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 33494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 4868636 - 4868576
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  4868636 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 6054428 - 6054488
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||||||| |||||| || || |||||||||||||||| |||| |||||    
T  6054428 aatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 27653232 - 27653296
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||  ||||| |||||||||||  ||||||||||||||| |||||| ||||||||| ||||    
T  27653232 aagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgattt 27653296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 30256603 - 30256662
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaag 162  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||||||| |||| ||||    
T  30256603 aatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaag 30256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 2736236 - 2736166
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||| | |||| |||||||| |||| | |||||| ||||| |||||||||||||||| |||| |||||    
T  2736236 aagtggggacaatcctcacctcataaacagattttgtaggattgtgttagacccaaccacgatttctaaga 2736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 6543002 - 6542948
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| |||||||| || ||||||||||||| || |||||||||||||||| ||||    
T  6543002 aatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgattt 6542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 8026414 - 8026468
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  8026414 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 8026468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 8026629 - 8026683
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  8026629 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 8026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 13740931 - 13741001
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||  |||| |||| ||||||  |||||||||||| || |||||| |||||||||||||| |||||    
T  13740931 aagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13741001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 13746431 - 13746501
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||  |||| |||| ||||||  |||||||||||| || |||||| |||||||||||||| |||||    
T  13746431 aagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 30256837 - 30256891
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  30256837 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 30256891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 6400679 - 6400618
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||| ||||||  |||||||||||| || ||||||||||||||||  ||||||||||    
T  6400679 aatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagat 6400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 9705045 - 9705106
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||||||  |||||||||||| || |||||| ||||||||| |||| ||||||    
T  9705045 aatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagat 9705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 11721930 - 11721991
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  11721930 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 11721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 13353226 - 13353287
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  13353226 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 13353287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 15082198 - 15082149
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    ||||||||||| |||||||||||||||| |||||| ||||| ||| ||||    
T  15082198 tcacctcacaagccggttttgtgggattgtgttaggcccaaacacgattt 15082149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 33796351 - 33796412
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  33796351 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 33796412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 17147719 - 17147659
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || ||||||  |||||||| |||| |||||    
T  17147719 aatcctcacctcacaagccggttttgtggggttatgttaggtccaaccaccatttctaaga 17147659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 19639182 - 19639110
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    ||||||| | |||| ||||||||||||||||||| |||||  | ||||||  |||||||| |||| |||||||    
T  19639182 aagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaagata 19639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 25065153 - 25065093
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| |||||| || |||| |||||    
T  25065153 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 16162963 - 16163019
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||| |||||| ||||||||| || |||||||| |||||||||||||||||||    
T  16162963 tcacctcataaaccgattttgtggggttgtgttagactcaaccacaatttttaagat 16163019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 41066964 - 41067024
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    ||||||||||||||||||||||| |||||| || | |||| |||||||||||||| |||||    
T  41066964 aatcttcacctcacaaaccggttgtgtgggcttgttttaggcccaaccacaatttataaga 41067024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 4098212 - 4098161
Alignment:
Q  113 tcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||||||||| |||| |||||| |||||||||||||| ||||||    
T  4098212 tcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaagat 4098161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 16163192 - 16163254
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggat--tttgttagacccaaccacaatttttaaga 163  Q
    |||||||||||||||| ||||||||||||| |  | |||||| ||||||||||||||||||||    
T  16163192 aatcttcacctcacaatccggttttgtggggttatatgttaggcccaaccacaatttttaaga 16163254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 3169791 - 3169845
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||||||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  3169791 aatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 3169845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 4113065 - 4113004
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  4113065 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 17452887 - 17452826
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||||||||||||||| ||||||||||||| || |||||| || |||||| |||| ||||||    
T  17452887 aatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagat 17452826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 33156758 - 33156819
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||||||| |||| ||||||    
T  33156758 aatcctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaagat 33156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 25255341 - 25255397
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  25255341 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25255397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 40079177 - 40079237
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  40079177 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 7653522 - 7653564
Alignment:
Q  124 ttttgtgggattttgttagacccaaccacaatttttaagatat 166  Q
    |||||||||||| |||||| |||||||||||||| ||||||||    
T  7653522 ttttgtgggattgtgttaggcccaaccacaatttctaagatat 7653564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 17452738 - 17452684
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  17452738 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 17452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 25137362 - 25137308
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| |||||||| || ||||||||||||| || |||||| ||||||||||||||    
T  25137362 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacaattt 25137308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 25145544 - 25145482
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    |||| |||||||||||  |||||||||| | || |||||||||||||||| |||| |||||||    
T  25145544 aatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagata 25145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 38080629 - 38080683
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| || |||||||||| || |||||| ||||||||||||||    
T  38080629 aatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaattt 38080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 39348411 - 39348365
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaac 149  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||||    
T  39348411 aatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac 39348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 51589017 - 51589071
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  51589017 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccattt 51589071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 51590063 - 51590117
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| |||||||||||||||| |||||| ||||| ||| ||||    
T  51590063 aatcctcacctcacaagccggttttgtgggattgtgttaggcccaagcacgattt 51590117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 11924951 - 11925004
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||||| |||||||||||||||| | || |||||| ||||||||| ||||||||    
T  11924951 tcaccttacaaaccggttttgtgaggttgtgttaggcccaaccacgatttttaa 11925004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 26176933 - 26176994
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||| |||||||||||||||| || |||||| ||||||| | |||| ||||||    
T  26176933 aatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagat 26176994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 31432289 - 31432228
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||| ||||||||||||| || || ||| ||||||||| |||| ||||||    
T  31432289 aatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagat 31432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 35772054 - 35772115
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||| ||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  35772054 aatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 35892321 - 35892377
Alignment:
Q  108 tcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    ||||||||||| ||||||||||||| || |||||| | |||||| ||||| ||||||    
T  35892321 tcacctcacaacccggttttgtggggttctgttaggctcaaccataatttctaagat 35892377  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 41035886 - 41035826
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| |||||||||||||||| ||||||  ||||| || |||| |||||    
T  41035886 aatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 52650830 - 52650770
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| | ||||||||||| || |||||| |||||||| ||||| |||||    
T  52650830 aatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaaga 52650770  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 82113 - 82161
Alignment:
Q  115 acaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||||||||||||||||| || |||||| |||||||||||||| |||||    
T  82113 acaaaccggttttgtggggttgtgttaggcccaaccacaatttctaaga 82161  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 14318 - 14377
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccac 152  Q
    ||||||| | |||| ||||||||||| ||||||||||||| || |||||| |||||||||    
T  14318 aagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccac 14377  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 41022 - 40971
Alignment:
Q  110 acctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaa 161  Q
    |||||||||||  ||||| ||||||| |||||||||||||||| ||||||||    
T  41022 acctcacaaactagttttatgggattgtgttagacccaaccacgatttttaa 40971  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 56484 - 56538
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaattt 157  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||| ||||    
T  56484 aatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 56538  T

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Target: scaffold0519 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 1941 - 2002
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| ||||||    
T  1941 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 2002  T

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Target: scaffold0519; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 2176 - 2236
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| |||||| |||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  2176 aatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2236  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 5692 - 5741
Alignment:
Q  115 acaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| ||||||||||||| || |||||||||||||||| |||| ||||||    
T  5692 acaagccggttttgtggggttgtgttagacccaaccacgatttctaagat 5741  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 12672 - 12733
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagat 164  Q
    |||| |||||||||||  || ||||||| | || |||||| |||||||||||||||||||||    
T  12672 aatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaagat 12733  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 20964 - 21024
Alignment:
Q  103 aatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaaga 163  Q
    |||| ||||||||||| ||||||||||||| || |||||  ||||||||| |||| |||||    
T  20964 aatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 89622 - 89550
Alignment:
Q  93 aagtgggaaaaatcttcacctcacaaaccggttttgtgggattttgttagacccaaccacaatttttaagata 165  Q
    ||||||| | ||| ||||||| ||||  |||||||||| | || ||||||  |||||||||||||||||||||    
T  89622 aagtggggacaatattcaccttacaagtcggttttgtgaggttgtgttaggtccaaccacaatttttaagata 89550  T

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