View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10065_low_4 (Length: 421)
Name: NF10065_low_4
Description: NF10065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10065_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 16 - 403
Target Start/End: Original strand, 10571150 - 10571538
Alignment:
| Q |
16 |
acatcagtgtaaatacgaaaactagttgagaatgtgaccatcttaactaaaatatcgacaacttcattggttgtcttttaataaactcaacatctgagtt |
115 |
Q |
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| T |
10571150 |
acattagtgtaaatacgaaaactagttgagaatgtgactatcttaactaaaatatggacaacttcattggttgtcttttaataaactcaacatctgagtt |
10571249 |
T |
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| Q |
116 |
tgaagaagnnnnnnnn-gtaatatgaatctttcaacaatcttggatgatagtgccataatttcaatgaaactctcctatgttagggaacttagacactac |
214 |
Q |
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| T |
10571250 |
tgaagaagaaaaaaaaagtaatatgaatctttcaacaatctcagatgatagtgccataatttcaatgaaactctcctatgttagggaacttagacactac |
10571349 |
T |
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| Q |
215 |
attcctcaaatccaattcaaagcctacattaattagctagaactctcgagttcaacacatggtagataacgggtcaagagcttcccatgtatctacctcc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| |
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| T |
10571350 |
attcctcaaatccaattcaaagcctacattaattagctagaactctcgagttcaacgcatggcagataacgggccaagagcttcccatgtatctacctcc |
10571449 |
T |
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| Q |
315 |
attagtagcaaaaaatattctgacttggcaagtgcaaagctttcgttatcatctcagttagggaaaaaagacatttatattgaacttat |
403 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
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| T |
10571450 |
attagtagcaaaaaatattctgacttggcaagtgcaaagctttcgttatcatctcagttagggaaaagaggcatttatattgaacttat |
10571538 |
T |
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