View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10065_low_8 (Length: 279)
Name: NF10065_low_8
Description: NF10065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10065_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 43600410 - 43600663
Alignment:
| Q |
8 |
ttggtgttaggttctcaaaatcacatcatacgcgcttgcttccgtttcttgtggcgccatttctcctacatgtataattaacctttccttccttcgatca |
107 |
Q |
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| T |
43600410 |
ttggtgttaggttctcaaaatcacatcatacgcgcttgcttccgtttcttgtggcgccatttctcctacatgtataattaacctttccttccttcgatca |
43600509 |
T |
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| Q |
108 |
cttatagttaacaaccaattttcttctttcaattttcctggaaaaatgattgaaatgaaggcaatgagatttttctctttttcaattctcagtttggtac |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
43600510 |
cttatagttaacaaccaattttcttctttcaattttcctggaaaaatgattgaaatgaaggcattgagatttttctctttttcaattctcagtttggtac |
43600609 |
T |
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| Q |
208 |
tctttgttatctctgaagctcacaacttttctccttctccaacacccgcacctg |
261 |
Q |
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|||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |
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| T |
43600610 |
tctttgctatctctgaagctcacgacttttctccttctccaacacctgcacctg |
43600663 |
T |
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