View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10066_high_8 (Length: 287)
Name: NF10066_high_8
Description: NF10066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10066_high_8 |
 |  |
|
[»] chr4 (20 HSPs) |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 3671502 - 3671228
Alignment:
Q |
13 |
cagagagcagatacaggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgg |
112 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3671502 |
cagagagtagatacaggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgg |
3671403 |
T |
 |
Q |
113 |
gcactctctaatgctacatctggcagtacccatgagcaaatcgagtatttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctg |
212 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
3671402 |
gcactctctaatgctacatctggcagtacccatgagcaaatcgagtatttggcgagccagggttgcattaagcctctgtgtgatttgctcgtttgctctg |
3671303 |
T |
 |
Q |
213 |
atccaaaaattgttactgtctgtttacaatgtcttgagaattttctgaaggttggagaagcagagaaaaaccccg |
287 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
3671302 |
atccaaaaattgttactgtctgtttgcaatgtcttgagaattttctgaaggttggagaagcggagaaaaaccccg |
3671228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 55619307 - 55619187
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||| | |
|
|
T |
55619307 |
ttggtgagccatggttgcattaagcctctgtgtgatttgcttgtttgccctgatccaaaaattgtttctgtctgtttagatggtcttgagaattttctaa |
55619208 |
T |
 |
Q |
261 |
aggttggagaagcagagaaaa |
281 |
Q |
|
|
||||||||||||| ||||||| |
|
|
T |
55619207 |
aggttggagaagcggagaaaa |
55619187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 55626611 - 55626491
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||| | |
|
|
T |
55626611 |
ttggtgagccatggttgcattaagcctctgtgtgatttgcttgtttgccctgatccaaaaattgtttctgtctgtttagatggtcttgagaattttctaa |
55626512 |
T |
 |
Q |
261 |
aggttggagaagcagagaaaa |
281 |
Q |
|
|
||||||||||||| ||||||| |
|
|
T |
55626511 |
aggttggagaagcggagaaaa |
55626491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 55657657 - 55657537
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||| | |
|
|
T |
55657657 |
ttggtgagccatggttgcattaagcctctgtgtgatttgcttgtttgccctgatccaaaaattgtttctgtctgtttagatggtcttgagaattttctaa |
55657558 |
T |
 |
Q |
261 |
aggttggagaagcagagaaaa |
281 |
Q |
|
|
||||||||||||| ||||||| |
|
|
T |
55657557 |
aggttggagaagcggagaaaa |
55657537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 52983170 - 52983064
Alignment:
Q |
175 |
ttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctgaaggttggagaagca |
274 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
52983170 |
ttgcattaagcctctgtgtgatttgcttgtttgccctgatccaaaaattattattgtctgtttagaatgtcttgagaatattctgaaggttggagaagcg |
52983071 |
T |
 |
Q |
275 |
gagaaaa |
281 |
Q |
|
|
||||||| |
|
|
T |
52983070 |
gagaaaa |
52983064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 54630127 - 54630247
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||||||| ||| || || |||||||||||||||| | |
|
|
T |
54630127 |
ttggtgagccagggttgcattaagcctctgtgtgatttgctagtttgccctgatccaagaatagttactgtttgtctagaaggtcttgagaattttctaa |
54630226 |
T |
 |
Q |
261 |
aggttggagaagcagagaaaa |
281 |
Q |
|
|
||||||||||||||||||||| |
|
|
T |
54630227 |
aggttggagaagcagagaaaa |
54630247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 55636898 - 55637032
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
|||||||||||||||||| ||||||||||||| || |||||||||||||||||||| |||||||||| | ||| ||||| ||||||||||||| ||||| |
|
|
T |
55636898 |
caggctgttattgaagctagtctgattgcccccctagtcaatcttcttcaaaatgccgagtttgacattgcaaaagaagctgcatgggcactctttaatg |
55636997 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
||||||||| ||||||||||||||||| ||||| |
|
|
T |
55636998 |
ttacatctggtggtacccatgagcaaatcaagtat |
55637032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 55663880 - 55663766
Alignment:
Q |
169 |
ccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctgaaggttgga |
268 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||| || ||||||||||||||||| |||||||| |
|
|
T |
55663880 |
ccagggttgcattaaacctctgtgtgatttgcttgtttgccctgatccaacaattgttgctgtctgcttagaaggtcttgagaattttctggaggttgga |
55663781 |
T |
 |
Q |
269 |
gaagcagagaaaaac |
283 |
Q |
|
|
||||| ||||||||| |
|
|
T |
55663780 |
gaagcggagaaaaac |
55663766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 54861077 - 54860963
Alignment:
Q |
167 |
agccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctgaaggttg |
266 |
Q |
|
|
||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||| || || ||||||||||| |||||||||||| |
|
|
T |
54861077 |
agccagggttgcattaagcctctgtgtgatttgatggtttgccctgatccaagaattgttactgtctgtctagaaggtcttgagaatattctgaaggttg |
54860978 |
T |
 |
Q |
267 |
gagaagcagagaaaa |
281 |
Q |
|
|
|||||| ||||||| |
|
|
T |
54860977 |
gagaagtggagaaaa |
54860963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 52983424 - 52983286
Alignment:
Q |
22 |
gatacaggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctct |
121 |
Q |
|
|
||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||||||||||| |
|
|
T |
52983424 |
gatacaggctgttattgaagctggtctgattgctcccctagtcaatcttcttcaatatgccgagtttgacattaaaaaagaagctgcatgggcactctct |
52983325 |
T |
 |
Q |
122 |
aatgctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
|||||||| | | | |||||| |||||||||| ||||| |
|
|
T |
52983324 |
aatgctacgtttagtggtacccctgagcaaatcaagtat |
52983286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 54861318 - 54861185
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
|||||||| |||||||||||| ||||||| || || |||||||||||||||||||| |||||||||| | ||| ||||| |||||||||||| |||||| |
|
|
T |
54861318 |
caggctgtcattgaagctggtttgattgctcccctagtcaatcttcttcaaaatgctgagtttgacattaaaaaagaagctgcatgggcactcactaatg |
54861219 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagta |
159 |
Q |
|
|
||||||| || ||||||| ||||||||| |||| |
|
|
T |
54861218 |
ctacatcaggtggtacccacgagcaaatcaagta |
54861185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 55637131 - 55637243
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| |||||| ||||||||||||||||||||||||||||||| | | |||||||| |||||||||||| ||| || || |||||||||||||||||| |
|
|
T |
55637131 |
ttggagagccaaggttgcattaagcctctgtgtgatttgcttgctatccatgatccaagaattgttactgtttgtctagaaggtcttgagaattttctga |
55637230 |
T |
 |
Q |
261 |
aggttggagaagc |
273 |
Q |
|
|
||||||||||||| |
|
|
T |
55637231 |
aggttggagaagc |
55637243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 54629891 - 54630024
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||| | |||||||| ||| ||||||| |||||| |
|
|
T |
54629891 |
caggctgttattgaagctggtctgattgctcccctagtcaatcttcttcaaaatgcagagtttgacattacaaaggaagttgcacaggcactcactaatg |
54629990 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagta |
159 |
Q |
|
|
||||||||| ||||||| ||||| ||| |||| |
|
|
T |
54629991 |
ttacatctggtggtacccacgagcatatcaagta |
54630024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 55664127 - 55663993
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
||||||||||||||||||||||| ||||| || || || ||||||||||||||||| || ||||| | ||| ||||| ||||||||| | | ||||| |
|
|
T |
55664127 |
caggctgttattgaagctggtctaattgctcccctagtaaatcttcttcaaaatgccgattttgaagttcaaaaagaagctgcatgggcattatttaatg |
55664028 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
||||||||||| ||||||||||||||||| ||||| |
|
|
T |
55664027 |
ctacatctggcggtacccatgagcaaatcaagtat |
55663993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 55619540 - 55619406
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
||||||||||| |||||||||||||||| || || |||||||||||||||||||| ||| ||| | | ||| ||||| |||||||||||| ||||| |
|
|
T |
55619540 |
caggctgttatcaaagctggtctgattgctcccctagtcaatcttcttcaaaatgccgagcttgcgattaaaaaagaagctgcatgggcactccgtaatg |
55619441 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
||||||||| |||| |||||||||||| ||||| |
|
|
T |
55619440 |
ctacatctgatggtactcatgagcaaatcaagtat |
55619406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 55626844 - 55626710
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
||||||||||| ||||||||||||||||| || || |||||||||||||||||||| ||| ||| | | ||| ||||| ||||| |||||| ||||| |
|
|
T |
55626844 |
caggctgttatcgaagctggtctgattgctcccctagtcaatcttcttcaaaatgccgagcttgcgattaaaaaagaagctgcatgtgcactccgtaatg |
55626745 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
||||||||| |||| |||||||||||| ||||| |
|
|
T |
55626744 |
ctacatctgatggtactcatgagcaaatcaagtat |
55626710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 55657890 - 55657756
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
||||||||||| |||||||||||||||| || || |||||||||||||||||||| ||| ||| | | ||| ||||| |||||||||||| ||||| |
|
|
T |
55657890 |
caggctgttatcaaagctggtctgattgctcccctagtcaatcttcttcaaaatgccgagcttgcgattaaaaaagaagctgcatgggcactccgtaatg |
55657791 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
||||||||| |||| |||||||||||| ||||| |
|
|
T |
55657790 |
ctacatctgatggtactcatgagcaaatcaagtat |
55657756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 51316255 - 51316305
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaa |
76 |
Q |
|
|
||||||||||||||||||||||| ||||| || |||||| ||||||||||| |
|
|
T |
51316255 |
caggctgttattgaagctggtctcattgctcccctggtcgatcttcttcaa |
51316305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 50190501 - 50190412
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggca |
115 |
Q |
|
|
|||||||||||||| || ||||| ||||| || || |||| |||||||||||||| |||||||||| | ||| ||||| ||||||||| |
|
|
T |
50190501 |
caggctgttattgatgccggtcttattgctccacttgtcagacttcttcaaaatgcagagtttgacattaaaaaagaagctgcatgggca |
50190412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 54630322 - 54630355
Alignment:
Q |
248 |
gagaattttctgaaggttggagaagcagagaaaa |
281 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
54630322 |
gagaaatttctgaaggttggagaagcagagaaaa |
54630355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 134; Significance: 9e-70; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 9891185 - 9891318
Alignment:
Q |
26 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
125 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9891185 |
caggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatg |
9891284 |
T |
 |
Q |
126 |
ctacatctggcagtacccatgagcaaatcgagta |
159 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |
|
|
T |
9891285 |
ctacatctggcagtacccatgagcaaatcgagta |
9891318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 9891426 - 9891555
Alignment:
Q |
158 |
tatttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttc |
257 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
9891426 |
tatttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgaggattttc |
9891525 |
T |
 |
Q |
258 |
tgaaggttggagaagcagagaaaaaccccg |
287 |
Q |
|
|
|||||||||||||||| | ||||||||||| |
|
|
T |
9891526 |
tgaaggttggagaagcggggaaaaaccccg |
9891555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 13403306 - 13403439
Alignment:
Q |
27 |
aggctgttattgaagctggtctgattgcccctctggtcaatcttcttcaaaatgcggagtttgacactttaaaggaagcagcatgggcactctctaatgc |
126 |
Q |
|
|
|||||||||||||||| || |||||||| |||||||||||||||||||||||||| || ||||||| | ||| ||||| |||||||||||||| ||||| |
|
|
T |
13403306 |
aggctgttattgaagccggactgattgctcctctggtcaatcttcttcaaaatgccgaatttgacattaaaaaagaagctgcatgggcactctccaatgc |
13403405 |
T |
 |
Q |
127 |
tacatctggcagtacccatgagcaaatcgagtat |
160 |
Q |
|
|
|||||||||| ||||||||||||||||| ||||| |
|
|
T |
13403406 |
tacatctggcggtacccatgagcaaatcaagtat |
13403439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 13403538 - 13403658
Alignment:
Q |
161 |
ttggcgagccagggttgcattaagcctctgtgtgatttgcttgtttgctctgatccaaaaattgttactgtctgtttacaatgtcttgagaattttctga |
260 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||| | ||||||||| | ||||||| ||||||||| ||||||||| || ||||||||||| |||||| |
|
|
T |
13403538 |
ttggtgagccagggttgcattaagcctctgtgtgatcttcttgtttgccccgatccaagaattgttaccgtctgtttagaaggtcttgagaatattctga |
13403637 |
T |
 |
Q |
261 |
aggttggagaagcagagaaaa |
281 |
Q |
|
|
|| |||||||||||||||||| |
|
|
T |
13403638 |
agattggagaagcagagaaaa |
13403658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University