View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF10066_low_6 (Length: 336)
Name: NF10066_low_6
Description: NF10066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 51805867 - 51806188
Alignment:
| Q | 1 | gggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgcatcttgttc | 100 | Q |
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| T | 51805867 | gggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgcatcttgttc | 51805966 | T |
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| Q | 101 | atgttgagttgttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttggaaggtaag | 200 | Q |
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| T | 51805967 | atgttgagtagttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttggaaggtaag | 51806066 | T |
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| Q | 201 | agcaaatatttgatgggaagtttccggaaagtgatgaccaacctgaaaaatcaagacttatgatgtctcctttgttgtcacaggtgattccggtgaagtc | 300 | Q |
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| T | 51806067 | agcaaatatttgacgggaagtttccggaaagtgatgaccaacctgaaaaatcaagacttatgatgtctcctttgttgtcacaggtgattccggtgaagtc | 51806166 | T |
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| Q | 301 | gcagattggtttatccactttg | 322 | Q |
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| T | 51806167 | gcagattggtttatccactttg | 51806188 | T |
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