View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10068_high_10 (Length: 247)
Name: NF10068_high_10
Description: NF10068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10068_high_10 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 3709579 - 3709807
Alignment:
| Q |
19 |
tccaatacgttagtagcatgcaagtatggtaggtttttgtaaacgcaaacacatgcaaatatgttatgtatgaacatggtagaatgcatggacatgaaca |
118 |
Q |
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| T |
3709579 |
tccaatacgttagtagcatgtaagtatgttaggtttttgtaaacgtgaacacatgcaagtatgttatgtatgaacatggtagaatgcatggacatcaaaa |
3709678 |
T |
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| Q |
119 |
aattgtagaacatgagttcgcctaagcatgaaatatatgatgtcatatgtggaccgatggataatttgataagtgtaccatatcacgtcagtaataaagt |
218 |
Q |
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| T |
3709679 |
aattgtagaacatgagttcgcctaagcatggaatatatgatatcatatgtggaccgatggataatttgataagtgtaccaaatcacatgagtaataaagt |
3709778 |
T |
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| Q |
219 |
gataagtaaaaatcttcttcacattgatt |
247 |
Q |
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| T |
3709779 |
gataagtaaaaatcttcttcacattgatt |
3709807 |
T |
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