View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10068_low_5 (Length: 310)

Name: NF10068_low_5
Description: NF10068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10068_low_5
NF10068_low_5
[»] chr5 (17 HSPs)
chr5 (122-298)||(2319266-2319442)
chr5 (122-298)||(2319839-2320015)
chr5 (122-277)||(26268344-26268499)
chr5 (122-277)||(26268914-26269069)
chr5 (136-233)||(25993505-25993602)
chr5 (124-185)||(39166591-39166652)
chr5 (117-169)||(16971034-16971086)
chr5 (122-181)||(33284012-33284071)
chr5 (127-213)||(33283170-33283256)
chr5 (135-233)||(25992753-25992852)
chr5 (119-169)||(39950401-39950451)
chr5 (122-169)||(8204120-8204167)
chr5 (122-169)||(12190159-12190206)
chr5 (122-169)||(15184018-15184065)
chr5 (122-169)||(33002817-33002864)
chr5 (120-169)||(686415-686463)
chr5 (122-171)||(9142047-9142096)
[»] chr7 (32 HSPs)
chr7 (122-298)||(45887852-45888028)
chr7 (120-298)||(48259244-48259422)
chr7 (122-298)||(47331825-47332001)
chr7 (122-298)||(4985266-4985442)
chr7 (122-298)||(4989364-4989540)
chr7 (122-298)||(45887279-45887455)
chr7 (122-298)||(46757249-46757425)
chr7 (126-298)||(47331260-47331424)
chr7 (122-236)||(4984809-4984922)
chr7 (123-216)||(48259772-48259865)
chr7 (122-207)||(42455814-42455898)
chr7 (187-236)||(4988971-4989020)
chr7 (121-181)||(24322340-24322400)
chr7 (122-169)||(29006347-29006394)
chr7 (122-169)||(29007200-29007247)
chr7 (136-214)||(26803227-26803305)
chr7 (129-213)||(41533903-41533987)
chr7 (129-213)||(44909316-44909400)
chr7 (122-169)||(41224844-41224891)
chr7 (128-169)||(29315312-29315353)
chr7 (129-169)||(20890206-20890246)
chr7 (129-169)||(44896053-44896093)
chr7 (122-169)||(668179-668226)
chr7 (122-169)||(17145622-17145669)
chr7 (122-169)||(29314581-29314628)
chr7 (122-169)||(37468910-37468957)
chr7 (122-169)||(37469006-37469053)
chr7 (122-169)||(38778854-38778901)
chr7 (122-169)||(38779564-38779611)
chr7 (122-169)||(41194513-41194560)
chr7 (127-169)||(7677810-7677852)
chr7 (122-175)||(24321425-24321478)
[»] chr2 (11 HSPs)
chr2 (122-298)||(41984727-41984903)
chr2 (18-121)||(41222055-41222158)
chr2 (122-207)||(41043291-41043376)
chr2 (120-169)||(16426551-16426600)
chr2 (122-169)||(14573261-14573308)
chr2 (122-169)||(21471017-21471064)
chr2 (122-169)||(21471955-21472002)
chr2 (122-169)||(40992222-40992269)
chr2 (122-203)||(5276465-5276546)
chr2 (120-169)||(13134316-13134365)
chr2 (136-181)||(41519914-41519959)
[»] chr4 (35 HSPs)
chr4 (122-298)||(55864747-55864923)
chr4 (122-298)||(55864259-55864434)
chr4 (123-184)||(25370507-25370568)
chr4 (172-298)||(36957099-36957237)
chr4 (129-213)||(38014879-38014963)
chr4 (122-170)||(46765168-46765216)
chr4 (122-170)||(11681274-11681322)
chr4 (122-170)||(11689553-11689601)
chr4 (129-169)||(11680283-11680323)
chr4 (129-169)||(11688562-11688602)
chr4 (129-169)||(12590204-12590244)
chr4 (129-169)||(25655640-25655680)
chr4 (122-169)||(26611284-26611331)
chr4 (218-285)||(31344260-31344327)
chr4 (122-169)||(31910554-31910601)
chr4 (123-169)||(3847887-3847933)
chr4 (127-164)||(25654729-25654766)
chr4 (120-169)||(36865718-36865767)
chr4 (122-203)||(47198605-47198686)
chr4 (122-170)||(12589287-12589335)
chr4 (129-169)||(46764259-46764299)
chr4 (122-169)||(11417687-11417734)
chr4 (122-169)||(11417938-11417985)
chr4 (122-169)||(29651333-29651380)
chr4 (118-169)||(30808617-30808668)
chr4 (122-169)||(47376852-47376899)
chr4 (122-169)||(47377599-47377646)
chr4 (127-169)||(52758711-52758753)
chr4 (120-169)||(6246782-6246831)
chr4 (120-169)||(10424121-10424170)
chr4 (122-203)||(55160034-55160114)
chr4 (121-169)||(21165446-21165494)
chr4 (121-169)||(38694955-38695003)
chr4 (136-175)||(52492192-52492229)
chr4 (150-201)||(52749644-52749696)
[»] chr6 (26 HSPs)
chr6 (122-236)||(29997645-29997759)
chr6 (122-236)||(29998109-29998223)
chr6 (194-298)||(26470342-26470455)
chr6 (120-207)||(4826396-4826483)
chr6 (122-207)||(26226603-26226688)
chr6 (127-170)||(10607406-10607449)
chr6 (135-213)||(9427358-9427436)
chr6 (129-169)||(10608321-10608361)
chr6 (129-168)||(930930-930969)
chr6 (122-169)||(3543064-3543111)
chr6 (122-169)||(24125972-24126019)
chr6 (127-169)||(3542819-3542861)
chr6 (120-169)||(24126719-24126768)
chr6 (120-169)||(33480629-33480678)
chr6 (122-170)||(931843-931891)
chr6 (219-255)||(11769318-11769354)
chr6 (122-181)||(1035392-1035451)
chr6 (122-169)||(7193338-7193385)
chr6 (127-169)||(22582480-22582522)
chr6 (127-169)||(22587311-22587353)
chr6 (127-169)||(33479701-33479743)
chr6 (129-169)||(1034728-1034768)
chr6 (121-169)||(7531828-7531876)
chr6 (121-169)||(15083319-15083367)
chr6 (121-169)||(22579934-22579982)
chr6 (129-169)||(33018417-33018457)
[»] scaffold0136 (1 HSPs)
scaffold0136 (122-233)||(20648-20759)
[»] chr1 (15 HSPs)
chr1 (122-185)||(8561721-8561784)
chr1 (127-168)||(49611562-49611603)
chr1 (121-201)||(42384123-42384203)
chr1 (121-184)||(11469080-11469143)
chr1 (121-184)||(14925328-14925391)
chr1 (122-169)||(16270207-16270254)
chr1 (122-169)||(23440866-23440913)
chr1 (122-169)||(45064686-45064733)
chr1 (122-169)||(45065387-45065434)
chr1 (122-169)||(51974437-51974484)
chr1 (122-169)||(51987827-51987874)
chr1 (129-175)||(1012554-1012600)
chr1 (129-171)||(14924681-14924723)
chr1 (120-169)||(43737727-43737776)
chr1 (119-171)||(294622-294674)
[»] chr8 (12 HSPs)
chr8 (121-203)||(1365828-1365910)
chr8 (122-203)||(61454-61535)
chr8 (122-171)||(43924490-43924539)
chr8 (121-169)||(41092171-41092219)
chr8 (122-169)||(34992265-34992312)
chr8 (136-233)||(33608414-33608511)
chr8 (129-169)||(41348151-41348191)
chr8 (129-168)||(41348935-41348974)
chr8 (122-169)||(41859310-41859357)
chr8 (122-158)||(32328778-32328814)
chr8 (129-169)||(35759240-35759280)
chr8 (129-169)||(37639718-37639758)
[»] scaffold0155 (1 HSPs)
scaffold0155 (120-169)||(17337-17386)
[»] chr3 (11 HSPs)
chr3 (136-214)||(8327140-8327217)
chr3 (121-171)||(38336943-38336993)
chr3 (122-203)||(17226968-17227049)
chr3 (122-171)||(38337476-38337525)
chr3 (122-169)||(19132813-19132860)
chr3 (122-169)||(36750438-36750485)
chr3 (122-169)||(46719661-46719708)
chr3 (218-285)||(49085143-49085210)
chr3 (119-169)||(31556217-31556267)
chr3 (122-168)||(41755499-41755545)
chr3 (117-162)||(42108365-42108410)
[»] scaffold0041 (1 HSPs)
scaffold0041 (121-169)||(27576-27624)
[»] scaffold0311 (1 HSPs)
scaffold0311 (122-169)||(161-208)
[»] scaffold0129 (1 HSPs)
scaffold0129 (136-169)||(42500-42533)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 2319266 - 2319442
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 2319365  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319366 agtatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 2319442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 2320015 - 2319839
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  2320015 ggtggcatttaatttgggaaaggctagttttttcccaccataggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 2319916  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319915 agtatcaaatctccctcactttttctccccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 2319839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 26268344 - 26268499
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  26268344 ggtggcatttaatttgggaaatgttagttttttcccaccatgggaaagctttttctgaccattggatctaataaggaacacatctttatcatgaactctc 26268443  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttcctt 277  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26268444 attatcaaatctccctcactttctctctccacctcctcccaacaacaaacttcctt 26268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 26269069 - 26268914
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| || ||||    
T  26269069 ggtggcatttaatttgggaaaggttagttttttcccatcatgggaaagctttttctgaccaatgaatctgataaagaacacatctttatcataaactctc 26268970  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttcctt 277  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26268969 agtatcaaatctccctcactttctctctccacctcctcccaacaacaaacttcctt 26268914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 25993602 - 25993505
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagct-ttttctgaccattgaatctaataaagaacacatcttaatcatgaattctcagtatcaaatct 233  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||| | ||||||||||||| |||||| | | ||||||| ||||||    
T  25993602 tgggaaaggctagttttt-cccaccatgggaaagctcttttctgaccattagatctagtgaagaacacatctttatcatggactatcagtattaaatct 25993505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 39166591 - 39166652
Alignment:
Q  124 tggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattg 185  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||    
T  39166591 tggcatttaatttgggaaaaactagttttttcccactatggaaaagctttttctgaccattg 39166652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 16971086 - 16971034
Alignment:
Q  117 tccatggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  16971086 tccatggtgccatttaatttgggaaagactagttttttcccatcatgggaaag 16971034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 33284071 - 33284012
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgacc 181  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||    
T  33284071 ggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgacc 33284012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 33283170 - 33283256
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcat 213  Q
    |||||||||||||||||| ||||||| ||||| |||||||||| ||||| ||||||||  ||| ||| | |||||||| || |||||    
T  33283170 catttaatttgggaaaggttagttttatcccatcatgggaaaggtttttttgaccattagatcaaatgaggaacacatttttatcat 33283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 25992753 - 25992852
Alignment:
Q  135 ttgggaaaggctagttttttcccaccatgggaaagc--tttttctgaccattgaatctaataaagaacacatcttaatcatgaattctcagtatcaaatc 232  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||||  ||||| | ||||||| ||||| |||| | | | ||||||| |||||    
T  25992753 ttgggaaaggctagtttt-tcccaccatgggaaagctttttttctgaccattagatctagtgaagaacatatctttatcacggactgtcagtattaaatc 25992851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 39950401 - 39950451
Alignment:
Q  119 catggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  39950401 catggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 8204120 - 8204167
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  8204120 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 8204167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 12190206 - 12190159
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||||    
T  12190206 ggtgccatttaatttgggaaaagagagttttttcccaccatgggaaag 12190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 15184065 - 15184018
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 15184018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 33002864 - 33002817
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  33002864 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaag 33002817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 686415 - 686463
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| ||||||||||||||||||  || ||||||||||||||||||||    
T  686415 atggtgccatttaatttgggaaaggagag-tttttcccaccatgggaaag 686463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 9142047 - 9142096
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    ||||||||||| | |||||||||  |||| ||||||||||||||||||||    
T  9142047 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaagct 9142096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 45888028 - 45887852
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  45888028 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 45887929  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45887928 agtatcaaatctccctcactttttctccccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 45887852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 120 - 298
Target Start/End: Original strand, 48259244 - 48259422
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattc 219  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||    
T  48259244 atggtggcatttaatttgggaaagactagttttttcccaccataggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactc 48259343  T
Q  220 tcagtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48259344 tcagtatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 48259422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 47332001 - 47331825
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  47332001 ggtgacatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 47331902  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47331901 agtatcaaatctccctcactttttctctccaccttctcccaacaacaaacttccttccacaccatcggtggcaccta 47331825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 4985442 - 4985266
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  4985442 ggtgacatttaatttgggaaatgctagttttttcccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 4985343  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4985342 agtatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatgggtggcaccta 4985266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 4989540 - 4989364
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  4989540 ggtgacatttaatttgggaaatgctagttttttcccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 4989441  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4989440 agtatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatgggtggcaccta 4989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 45887279 - 45887455
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  45887279 ggtggcgtttaatttgggaaaggctagttttttcccaccatgggaaagctttttttgaccattggatctaataaagaacacatctttatcatgaactctc 45887378  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45887379 agtatcaaatctcccgcactttttctctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 45887455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 46757425 - 46757249
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  46757425 ggtggcatttaatttgggaaagactagtttttccccaccatgggaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 46757326  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  46757325 agtatcaaatctccctcactttctctctccacctcctcccaacaacaaacttccttccacaccatcgatgacaccta 46757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 126 - 298
Target Start/End: Original strand, 47331260 - 47331424
Alignment:
Q  126 gcatttaatttgggaaa-ggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctcagt 224  Q
    ||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||             
T  47331260 gcatttaatttgggaaaaggttagttttttcccaccatgagaaagttttttctgaccattggatctaataaagaacacatctttatcatga--------- 47331350  T
Q  225 atcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47331351 atcaaatctccctcactttttctcttcacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 47331424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 4984809 - 4984922
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  4984809 ggtggcatttaatttgggaaaggttagttttttcc-accatggaaaagctttttctgaccattggatctaataaagaacacatctttatcatgaactctc 4984907  T
Q  222 agtatcaaatctccc 236  Q
    |||||||||||||||    
T  4984908 agtatcaaatctccc 4984922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 48259865 - 48259772
Alignment:
Q  123 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaa 216  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  48259865 gtggcatttaatttgggaaatgttagttttttcccaccatgggaaaactttttctgaccattggatctaataaagaacacatctttatcatgaa 48259772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 42455898 - 42455814
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatctt 207  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||| |||||||||||||||||||| | |  ||||||||||||    
T  42455898 ggtggcatttaatttgggaaaggctagtttttt-ccactatggaaaaactttttctgaccattgaatcgagtgtagaacacatctt 42455814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 4988971 - 4989020
Alignment:
Q  187 atctaataaagaacacatcttaatcatgaattctcagtatcaaatctccc 236  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4988971 atctaataaagaacacatctttatcatgaactctcagtatcaaatctccc 4989020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 24322400 - 24322340
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgacc 181  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||    
T  24322400 tggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgacc 24322340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 29006347 - 29006394
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||    
T  29006347 ggtgccatttaatttgggaaaggcttgttttttcccaccatgggaaag 29006394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 29007247 - 29007200
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||    
T  29007247 ggtgtcatttaatttgggaaaggcttgttttttcccaccatgggaaag 29007200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 26803305 - 26803227
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatg 214  Q
    ||||||||| ||||||||| |||||||| |||||||||||||  |||||  ||| | ||||||||||||||| ||||||    
T  26803305 tgggaaagggtagtttttttccaccatgagaaagctttttctatccattagatcaagtaaagaacacatctttatcatg 26803227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 41533903 - 41533987
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcat 213  Q
    ||||||||||||||||  |||||||| |||||||||||||| ||||| || || ||| ||| ||| | |||||||| ||||||||    
T  41533903 tttaatttgggaaaggtaagtttttttccaccatgggaaaggtttttttggccgttggatcaaatgaggaacacattttaatcat 41533987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 44909400 - 44909316
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcat 213  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||| || || ||| ||| ||| | ||| |||| ||||||||    
T  44909400 tttaatttgggaaaggtaagttttttcccaccatgggaaaggtttttttggccgttggatcaaatgaggaatacattttaatcat 44909316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 41224891 - 41224844
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||    
T  41224891 ggtgccatttaatttgggaaaggcttattttttcccaccatgggaaag 41224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 29315353 - 29315312
Alignment:
Q  128 atttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  29315353 atttaatttgggaaagactagttttttcccatcatgggaaag 29315312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 20890206 - 20890246
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  20890206 tttaatttgggaaaggacagttttttcccaccatgggaaag 20890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 44896053 - 44896093
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  44896053 tttaatttgggaaagactagtttttccccaccatgggaaag 44896093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 668179 - 668226
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 17145622 - 17145669
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 17145669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 29314581 - 29314628
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||| |||||||| ||||||| ||||||||||||||    
T  29314581 ggtgccatttaatttgagaaaggcttgtttttttccaccatgggaaag 29314628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 37468910 - 37468957
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  37468910 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 37468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 37469053 - 37469006
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 37469006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 38778854 - 38778901
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  38778854 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 38778901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 38779611 - 38779564
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 38779564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 41194513 - 41194560
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  41194513 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 41194560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 7677852 - 7677810
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  7677852 catttaatttgggaaaggagagttctttcccaccatgggaaag 7677810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 24321425 - 24321478
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagcttttt 175  Q
    |||| |||||||||||||||||| ||||||| ||||| ||| |||||| |||||    
T  24321425 ggtgccatttaatttgggaaaggttagttttatcccatcataggaaaggttttt 24321478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 41984727 - 41984903
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||| || ||||    
T  41984727 ggtggcatttaatttgggaaaggctagttttttctcaccatgggaaagctatttctgaccattagatctaataaagaacacatctttatcataaactctc 41984826  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41984827 agtatcaaatctccctcactttctctctccacctcctcccaacaacaaacttccttccacaccattggtggcaccta 41984903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 41222158 - 41222055
Alignment:
Q  18 gaattttatggttgagatgtaactaacaatttagaaagaatgaggatttcaattgagagaatctctattctcatatgtcaagtgaatatgagaaatctat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41222158 gaattttatggttgagatgtaactaacaatttagaaagaatgaggatttcaattgagagaatctctattctcatatgtcacgtgaatatgagaaatctat 41222059  T
Q  118 ccat 121  Q
    ||||    
T  41222058 ccat 41222055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 41043376 - 41043291
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatctt 207  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |  ||||||||||||    
T  41043376 ggtggcatttaatttgggaaaggctagttttttcccatcatggaaaagctttttctgaccattgaatcaagtgtagaacacatctt 41043291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 16426551 - 16426600
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  16426551 atggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaag 16426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 14573261 - 14573308
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 14573308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 21471017 - 21471064
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  21471017 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 21471064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 21472002 - 21471955
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 21471955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 40992222 - 40992269
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||    
T  40992222 ggtgccatttaatttgggaaaggtttgttttttcctaccatgggaaag 40992269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 5276465 - 5276546
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    |||||||||||| ||||||||||  | || ||||||||||||||||||  |||||| | ||||| |||  | ||||||||||    
T  5276465 ggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagtcttttctaatcattggatcatacaaagaacaca 5276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 13134316 - 13134365
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| ||||||||||||||||||  |||| ||||||||||| ||||||    
T  13134316 atggtgccatttaatttgggaaaggagagttctttcccaccataggaaag 13134365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 41519959 - 41519914
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagctttttctgacc 181  Q
    |||||||||  ||||||||||||||||||||||| ||||| |||||    
T  41519959 tgggaaagggaagttttttcccaccatgggaaagttttttttgacc 41519914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 55864923 - 55864747
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||    
T  55864923 ggtggcatttaatttaagaaaggctagttttttcccaccatggaaaagctttttctgaccattggatctaataaagaatacatctttatcatgaactctc 55864824  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    | |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55864823 aatatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 55864747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 55864259 - 55864434
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    |||| |||||||||||||||| |||||||||| ||||  |||  |||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  55864259 ggtgacatttaatttgggaaatgctagttttt-cccataatgaaaaagctttttctgaccattggatctaataaagaacacatctttatcctgaattctc 55864357  T
Q  222 agtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55864358 agtatcaaatctccctcactttttctctccacctcctcccaacaacaaacttccttccacaccatcggtggcaccta 55864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 25370507 - 25370568
Alignment:
Q  123 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccatt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25370507 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccatt 25370568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 36957099 - 36957237
Alignment:
Q  172 ttttctgaccattgaatctaataaagaacacatcttaatcatgaattctcagtatcaaatctccctcactttctttctccac------------ctcctc 259  Q
    ||||||||||| |  ||||||||||||||| ||||| || ||||| ||||| |||||||||||||||||||||| |||||||            ||||||    
T  36957099 ttttctgaccaatagatctaataaagaacagatctttattatgaactctcaatatcaaatctccctcactttctctctccacctcctcccatctctcctc 36957198  T
Q  260 ccaacaacaaacttccttccacaccatcggtggcaccta 298  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36957199 ccaacaacaaacttccttccacaccatcgctggcaccta 36957237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 38014963 - 38014879
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcat 213  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||  ||| ||| | |||||||| ||||||||    
T  38014963 tttaatttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcat 38014879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 46765216 - 46765168
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46765216 ggtggcatttaatttgggaaagactagttttttcccaccatgggaaagc 46765168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 11681322 - 11681274
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11681322 ggtggcatttaatttggaaaagactagttttttcccaccatgggaaagc 11681274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 11689601 - 11689553
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11689601 ggtggcatttaatttggaaaagactagttttttcccaccatgggaaagc 11689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 11680283 - 11680323
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11680283 tttaatttgggaaaggttagttttttcccaccatgggaaag 11680323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 11688562 - 11688602
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11688562 tttaatttgggaaaggttagttttttcccaccatgggaaag 11688602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 12590244 - 12590204
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12590244 tttaatttgggaaaggctagtttttttccaccatgggaaag 12590204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 25655680 - 25655640
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25655680 tttaatttgggaaagactagttttttcccaccatgggaaag 25655640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 26611331 - 26611284
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  26611331 ggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaag 26611284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 31344327 - 31344260
Alignment:
Q  218 tctcagtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacacca 285  Q
    ||||| ||||| |||||||||||||||| |||  ||||||| ||||||||||||||||  ||||||||    
T  31344327 tctcactatcatatctccctcactttctctctttacctccttccaacaacaaacttccacccacacca 31344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 31910554 - 31910601
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  31910554 ggtgtcatttaatttaggaaaggcttgttttttcccaccatgggaaag 31910601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 3847887 - 3847933
Alignment:
Q  123 gtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||    
T  3847887 gtggcatttaatttgggaaaggagacttttttcccaccatgggaaag 3847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 25654729 - 25654766
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgg 164  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25654729 catttaatttgggaaagactagttttttcccaccatgg 25654766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 36865767 - 36865718
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  36865767 atggtgacatttaatttgggaaaggagagttctttcccaccatgggaaag 36865718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 47198605 - 47198686
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    |||| ||||||||||||||||||  | || ||||||||||||||||||  |||||| ||||||| |||  | ||||||||||    
T  47198605 ggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagtcttttctaaccattggatcatacaaagaacaca 47198686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 12589287 - 12589335
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    |||| |||||||||||||||||  |||||||||||||| ||||||||||    
T  12589287 ggtgacatttaatttgggaaagattagttttttcccactatgggaaagc 12589335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 46764259 - 46764299
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  46764259 tttaatttggaaaagactagttttttcccaccatgggaaag 46764299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 11417687 - 11417734
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  11417687 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 11417734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 11417985 - 11417938
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaag 11417938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 29651380 - 29651333
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  29651380 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 29651333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 30808617 - 30808668
Alignment:
Q  118 ccatggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||  |||||||||  |||| ||||||||||||||||||    
T  30808617 ccatggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaag 30808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 47376852 - 47376899
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaag 47376899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 47377646 - 47377599
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  47377646 ggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaag 47377599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 52758753 - 52758711
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| |||||||||||| || ||||||||||    
T  52758753 catttaatttgggaaatgctagttttttctcatcatgggaaag 52758711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 6246782 - 6246831
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||| ||||||||||||||||  | || ||||||||||||||||||    
T  6246782 atggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaag 6246831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 10424121 - 10424170
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| ||||||||||||||||||  |||| ||||||||||| ||||||    
T  10424121 atggtgccatttaatttgggaaaggagagttctttcccaccataggaaag 10424170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 55160114 - 55160034
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    |||||||||||||||||||||||  |  |||||| |||||||||||||  |||||| | ||||| |||  ||||||||||||    
T  55160114 ggtggcatttaatttgggaaaggaga-ctttttctcaccatgggaaagtcttttctaatcattggatcatataaagaacaca 55160034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 21165446 - 21165494
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| |||||||||||||||||  ||||| |||||||||||| |||||    
T  21165446 tggtgccatttaatttgggaaagaatagttctttcccaccatgagaaag 21165494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 38695003 - 38694955
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| ||||||||||||||||||  |||| |||||||||||| |||||    
T  38695003 tggtgccatttaatttgggaaaggagagttctttcccaccatgagaaag 38694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 52492192 - 52492229
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagcttttt 175  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  52492192 tgggaaaggctagttttt--ccaccatgggaaagcttttt 52492229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 52749696 - 52749644
Alignment:
Q  150 tttttcccaccatgggaaagcttttt-ctgaccattgaatctaataaagaaca 201  Q
    |||||||||  ||||||||||||||| |||||||||||||| | |||||||||    
T  52749696 tttttcccattatgggaaagcttttttctgaccattgaatcaactaaagaaca 52749644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 29997645 - 29997759
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29997645 ggtggcatttaatttgggaaagattagtttttttccaccatgggaaagctttttctgaccattgaatctaataaagaacacatctttatcatgaactctc 29997744  T
Q  222 agtatcaaatctccc 236  Q
    |||||||||||||||    
T  29997745 agtatcaaatctccc 29997759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 29998223 - 29998109
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  29998223 ggtggcatttaatttggaaaaggttagtttttttccatcatgggaaagctttttctgactattgaatctaataaagaacacatctttatcatgaactctc 29998124  T
Q  222 agtatcaaatctccc 236  Q
     ||||||||||||||    
T  29998123 ggtatcaaatctccc 29998109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 26470342 - 26470455
Alignment:
Q  194 aaagaacacatcttaatcatgaattctcagtatcaaatctccctcactttctttctccacctcctccca---------acaacaaacttccttccacacc 284  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||          ||||| |||||||||||||||    
T  26470342 aaagaacacatctttatcatgaactctcagtatcaaatctccctcactgtctctctccacctcctcccatctctcctcccaacagacttccttccacacc 26470441  T
Q  285 atcggtggcaccta 298  Q
    ||||||||||||||    
T  26470442 atcggtggcaccta 26470455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 4826396 - 4826483
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatctt 207  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||| | |  ||||||||||||    
T  4826396 atggtggcatttaatttgggaaagactagttatttcccaccacgggaaagctttttctgaccattggatcaagtgtagaacacatctt 4826483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 26226603 - 26226688
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatctt 207  Q
    ||||| ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| ||||||||| | |  ||||||||||||    
T  26226603 ggtggtatttaatttgggaaaggttagtttttttccaccatagaaaagctttttctgaacattgaatcaagtgtagaacacatctt 26226688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 10607406 - 10607449
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  10607406 catttaatttgggaaagactagttttttcccaccatgggaaagc 10607449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 9427358 - 9427436
Alignment:
Q  135 ttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcat 213  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||| ||  ||| ||| | |||||||| ||||||||    
T  9427358 ttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcat 9427436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 10608361 - 10608321
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10608361 tttaatttgggaaaggctggttttttcccaccatgggaaag 10608321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 930930 - 930969
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaa 168  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  930930 tttaatttgggaaagactagttttttcccaccatgggaaa 930969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 3543111 - 3543064
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 3543064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 24125972 - 24126019
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaag 24126019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 3542819 - 3542861
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  3542819 catttaatttgggaaaggagagttttttcccaccatgggaaag 3542861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 24126768 - 24126719
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  24126768 atggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaag 24126719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 33480678 - 33480629
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  33480678 atggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 33480629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 931891 - 931843
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagc 170  Q
    ||||||||||||||| | ||||  |||||||||||||||||||||||||    
T  931891 ggtggcatttaatttagaaaagattagttttttcccaccatgggaaagc 931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 11769354 - 11769318
Alignment:
Q  219 ctcagtatcaaatctccctcactttctttctccacct 255  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11769354 ctcagtatcaaatctccctcactttctatctccacct 11769318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 1035451 - 1035392
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgacc 181  Q
    |||| |||||||||||| ||||| || |||||||||| |||||||||| ||||| |||||    
T  1035451 ggtgccatttaatttggaaaaggttaattttttcccatcatgggaaagatttttttgacc 1035392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 7193338 - 7193385
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  7193338 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 7193385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 22582522 - 22582480
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  22582522 catttaatttgggaaaggagagttctttcccaccatgggaaag 22582480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 22587353 - 22587311
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  22587353 catttaatttgggaaaggagagttctttcccaccatgggaaag 22587311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 33479701 - 33479743
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  33479701 catttaatttgggaaaggagagttatttcccaccatgggaaag 33479743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 1034728 - 1034768
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| |||||||| |||||||| ||||||    
T  1034728 tttaatttgggaaaggttagtttttccccaccataggaaag 1034768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 7531828 - 7531876
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||||||||  | || ||||| ||||||||||||    
T  7531828 tggtggcatttaatttgggaaaggagacttctttcctaccatgggaaag 7531876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 15083367 - 15083319
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| ||||||||||||||||||  |||| |||||||||||| |||||    
T  15083367 tggtgccatttaatttgggaaaggagagttctttcccaccatgagaaag 15083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 22579934 - 22579982
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| ||||||||||||||||||  |||| ||| ||||||||||||||    
T  22579934 tggtgccatttaatttgggaaaggagagttcttttccaccatgggaaag 22579982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 33018457 - 33018417
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  33018457 tttaatttgggaaaggagagttctttcccaccatgggaaag 33018417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 20648 - 20759
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatgaattctc 221  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||| ||| | |  |||||||||||| || ||| | ||||    
T  20648 ggtggcatttaatttggaaaaggctactttttttccaccatgggaaagatttttctgaccattggatcaagtgtagaacacatctttattatggactctc 20747  T
Q  222 agtatcaaatct 233  Q
    | ||| ||||||    
T  20748 aatattaaatct 20759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 8561784 - 8561721
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattg 185  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  8561784 ggtgacatttaatttgggaaagactagttttttcccatcatgggaaagctttttctgaccattg 8561721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 49611603 - 49611562
Alignment:
Q  127 catttaatttgggaaaggctagttttttcccaccatgggaaa 168  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  49611603 catttaatttgggaaaggctagttttttcccatcatgggaaa 49611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 42384203 - 42384123
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaaca 201  Q
    |||||||||||| | ||||||||| || || ||||| | |||||||||| ||||||||||||||  || |||||| |||||    
T  42384203 tggtggcatttagtatgggaaaggatacttgtttcctatcatgggaaagttttttctgaccattagatttaataaggaaca 42384123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 11469080 - 11469143
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccatt 184  Q
    ||||||| |||||||| |||||||  |||| ||||||||||||||||||||  || ||||||||    
T  11469080 tggtggcgtttaatttaggaaagggaagttgtttcccaccatgggaaagctaattttgaccatt 11469143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 14925391 - 14925328
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccatt 184  Q
    ||||||| ||||||||||| ||||  |||| ||||||||||||||||||||  || ||||||||    
T  14925391 tggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaagctaattttgaccatt 14925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 16270207 - 16270254
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 16270254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 23440913 - 23440866
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 23440866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 45064686 - 45064733
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  45064686 ggtgccatttaatttgggaaagattagttttttcccatcatgggaaag 45064733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 45065434 - 45065387
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||| ||| ||| ||||||||||||||||||||||    
T  45065434 ggtgccatttaatttggaaaaagcttgttttttcccaccatgggaaag 45065387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 51974437 - 51974484
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  51974437 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 51974484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 51987827 - 51987874
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||||||||||  | || ||||||||||||||||||    
T  51987827 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaag 51987874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 1012554 - 1012600
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaagcttttt 175  Q
    ||||||||||||||||  | ||||||||||||||||||||| |||||    
T  1012554 tttaatttgggaaaggagatttttttcccaccatgggaaagtttttt 1012600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 14924681 - 14924723
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  14924681 tttaatttgggaaagggaagttgtttcccaccatgggaaagct 14924723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 43737727 - 43737776
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| |||||||||||||||||   |||| ||||||||||||||||||    
T  43737727 atggtgccatttaatttgggaaagtagagttatttcccaccatgggaaag 43737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 294622 - 294674
Alignment:
Q  119 catggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    ||||||||| |||| | |||||| ||  |||||||||||||||||||||||||    
T  294622 catggtggcgtttagtatgggaatggggagttttttcccaccatgggaaagct 294674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 1365828 - 1365910
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    ||||||||||||||||||||||||  | || ||||||||||||||||||  |||||| ||||||| |||  | ||||||||||    
T  1365828 tggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagtcttttctaaccattggatcatacaaagaacaca 1365910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 61454 - 61535
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    |||||||||||||||||||||||  | || ||||||||||||||||||  |||||| ||||||| |||  | ||||||||||    
T  61454 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagtcttttctaaccattggatcatacaaagaacaca 61535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 43924490 - 43924539
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaagct 43924539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 41092171 - 41092219
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  41092171 tggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaag 41092219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 34992312 - 34992265
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  34992312 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 34992265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 33608414 - 33608511
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagctttt-tctgaccattgaatctaataaagaacacatcttaatcatgaattctcagtatcaaatct 233  Q
    ||||||| |||||||||| ||||| || ||||||||||| ||||||||||  ||||||| |||||||| |||| |||||| | | ||||||| ||||||    
T  33608414 tgggaaatgctagttttt-cccactataggaaagcttttttctgaccattagatctaatgaagaacacgtctttatcatggactgtcagtattaaatct 33608511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 41348151 - 41348191
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  41348151 tttaatttgggaaaggttagtttttccccaccatgggaaag 41348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 41348974 - 41348935
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaa 168  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  41348974 tttaatttgggaaaggctagtttttttccactatgggaaa 41348935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 41859310 - 41859357
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  41859310 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 41859357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 32328814 - 32328778
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttccca 158  Q
    |||||| |||||||||||||||| |||||||||||||    
T  32328814 ggtggcgtttaatttgggaaaggatagttttttccca 32328778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 35759280 - 35759240
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  35759280 tttaattagggaaaggctggtttttccccaccatgggaaag 35759240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 37639718 - 37639758
Alignment:
Q  129 tttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaag 37639758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 17337 - 17386
Alignment:
Q  120 atggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  17337 atggtgccatttaatttggaaaaggcttgttttttcccaccatgggaaag 17386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 8327217 - 8327140
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacacatcttaatcatg 214  Q
    |||||||| ||| |||||||| |||||||||||| ||||||||||||||  || || |||||||||| |||| ||||||    
T  8327217 tgggaaagactaattttttcc-accatgggaaagttttttctgaccattagatttagtaaagaacacgtctttatcatg 8327140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 38336943 - 38336993
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    ||||||||||||||||||| ||||  |||| ||||||||||||||||||||    
T  38336943 tggtggcatttaatttggggaagggaagttgtttcccaccatgggaaagct 38336993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 17226968 - 17227049
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagctttttctgaccattgaatctaataaagaacaca 203  Q
    |||||||||||||||||||||||  | || |||||||||||||||||   |||||| |||| ||||||  | ||||||||||    
T  17226968 ggtggcatttaatttgggaaaggagatttctttcccaccatgggaaaatcttttctaaccaatgaatcatacaaagaacaca 17227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 38337525 - 38337476
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaagct 171  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  38337525 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagct 38337476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 19132860 - 19132813
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaag 19132813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 36750485 - 36750438
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  36750485 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 36750438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 46719661 - 46719708
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| |||||||||||||||| |||||||||||| || ||||||||||    
T  46719661 ggtgccatttaatttgggaaatgctagttttttctcatcatgggaaag 46719708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 49085210 - 49085143
Alignment:
Q  218 tctcagtatcaaatctccctcactttctttctccacctcctcccaacaacaaacttccttccacacca 285  Q
    ||||| ||||| ||||| |||||||||| |||  || |||| |||||||||||||||| |||||||||    
T  49085210 tctcactatcatatctctctcactttctctctttacttccttccaacaacaaacttccatccacacca 49085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 31556267 - 31556217
Alignment:
Q  119 catggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||    
T  31556267 catggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 41755499 - 41755545
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaa 168  Q
    |||| ||||||||||||||||||  ||||||||||||||||| ||||    
T  41755499 ggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaa 41755545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 42108365 - 42108410
Alignment:
Q  117 tccatggtggcatttaatttgggaaaggctagttttttcccaccat 162  Q
    ||||||||||| ||||||||||||||||  |||| |||||||||||    
T  42108365 tccatggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 27624 - 27576
Alignment:
Q  121 tggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||| |||||||||||| |||||  |||||||||||||||||||||||    
T  27624 tggtgccatttaatttggaaaaggagagttttttcccaccatgggaaag 27576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 208 - 161
Alignment:
Q  122 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 169  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  208 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 42500 - 42533
Alignment:
Q  136 tgggaaaggctagttttttcccaccatgggaaag 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  42500 tgggaaaggctagtttttttccaccatgggaaag 42533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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