View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10070_high_12 (Length: 474)

Name: NF10070_high_12
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10070_high_12
NF10070_high_12
[»] scaffold0150 (1 HSPs)
scaffold0150 (19-456)||(13884-14323)
[»] chr2 (7 HSPs)
chr2 (147-456)||(7867170-7867486)
chr2 (171-299)||(8145410-8145541)
chr2 (147-200)||(23876058-23876111)
chr2 (147-194)||(7868142-7868189)
chr2 (147-200)||(6085696-6085749)
chr2 (145-201)||(44094811-44094867)
chr2 (147-194)||(36390957-36391004)
[»] chr7 (11 HSPs)
chr7 (385-456)||(9123316-9123389)
chr7 (147-216)||(29060718-29060787)
chr7 (147-201)||(40320404-40320458)
chr7 (147-200)||(36844612-36844665)
chr7 (147-191)||(9122650-9122694)
chr7 (154-194)||(24996684-24996724)
chr7 (147-194)||(24995852-24995899)
chr7 (146-201)||(32871134-32871189)
chr7 (147-194)||(42607081-42607128)
chr7 (147-189)||(6730163-6730205)
chr7 (147-183)||(42607824-42607860)
[»] chr3 (11 HSPs)
chr3 (147-200)||(49160987-49161040)
chr3 (147-216)||(33455760-33455829)
chr3 (145-203)||(43768024-43768082)
chr3 (145-226)||(45298328-45298407)
chr3 (154-217)||(31598772-31598835)
chr3 (146-188)||(8653727-8653769)
chr3 (147-189)||(44022093-44022135)
chr3 (154-200)||(49161803-49161849)
chr3 (147-216)||(33454866-33454935)
chr3 (153-193)||(26836352-26836392)
chr3 (146-201)||(33968180-33968236)
[»] scaffold2003 (1 HSPs)
scaffold2003 (147-194)||(532-579)
[»] chr5 (7 HSPs)
chr5 (147-234)||(9923388-9923475)
chr5 (147-194)||(6804891-6804938)
chr5 (148-194)||(4789521-4789567)
chr5 (146-200)||(1970509-1970563)
chr5 (210-272)||(43588356-43588418)
chr5 (154-194)||(26712389-26712429)
chr5 (154-194)||(26982127-26982167)
[»] chr8 (8 HSPs)
chr8 (147-223)||(35840502-35840578)
chr8 (147-234)||(7054090-7054177)
chr8 (19-56)||(17015815-17015852)
chr8 (19-56)||(17546252-17546289)
chr8 (146-234)||(42345393-42345481)
chr8 (147-234)||(42346066-42346153)
chr8 (147-189)||(35943076-35943118)
chr8 (147-199)||(35943835-35943887)
[»] chr6 (2 HSPs)
chr6 (145-193)||(8384020-8384068)
chr6 (147-194)||(29290123-29290170)
[»] chr4 (14 HSPs)
chr4 (146-194)||(25970105-25970153)
chr4 (145-194)||(36450726-36450775)
chr4 (147-194)||(38009284-38009331)
chr4 (147-234)||(39429898-39429985)
chr4 (147-194)||(45330565-45330612)
chr4 (148-194)||(36451428-36451474)
chr4 (147-188)||(22062233-22062274)
chr4 (174-263)||(31911400-31911489)
chr4 (174-263)||(32450150-32450239)
chr4 (156-217)||(47326767-47326828)
chr4 (156-217)||(47341563-47341624)
chr4 (146-194)||(232050-232098)
chr4 (142-194)||(30808616-30808668)
chr4 (146-234)||(39429224-39429312)
[»] chr1 (7 HSPs)
chr1 (147-217)||(34716424-34716494)
chr1 (147-194)||(47334199-47334246)
chr1 (147-194)||(50950145-50950192)
chr1 (145-194)||(4640526-4640575)
chr1 (145-201)||(6766972-6767028)
chr1 (154-194)||(30466189-30466229)
chr1 (147-187)||(41884237-41884277)
[»] scaffold0129 (1 HSPs)
scaffold0129 (146-194)||(43219-43267)


Alignment Details
Target: scaffold0150 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 19 - 456
Target Start/End: Original strand, 13884 - 14323
Alignment:
Q  19 gtacctataaaagaattcaaatgtgcattcttaggagaccccaaacattgaatctccacggtacacagctttcacatgaacatcaattatcgggcaagaa 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13884 gtacctataaaagaattcaaatgtgcattcttaggagacgccaaacattgaatctccacggtacacagctttcacatgaacatcatttatcgggcaagaa 13983  T
Q  119 aatgtttacctccaaaacgagctaccatggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaac 218  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  13984 aatgtttacctccaaaacgagttaccatggtgggatttagcatgggaaaggggagttgtttcccaccatggaaaatgttttataaacggtcagattaaac 14083  T
Q  219 aggtgtattgattttagcttggtctgttcacactatattttttctttctctttaatattcatcttcaacctccattgtcttgaacatatatcattcctgc 318  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14084 agatgtattgattttagcttggtctgtccacactatattttttctttctctttaatattcatcttcaacctccattgtcttgaacatatatcattcctgc 14183  T
Q  319 aattcccctctcctctgttgtagcatctaaaaattggtgacaaaagagaaagnnnnnnncagtcatcaattacccctttcctgcctcatgttt--tctct 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||  |||||    
T  14184 aattcccctctcctctgttgtagcatctaaaaattggtgacaaaagagagaaaaaaaatcagtcatcaattacccctttcctgcctcatgttttctctct 14283  T
Q  417 ccatggtcttggatttctcccttttcagcttcctcctcct 456  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14284 ccatggtcttggatttctcccttttcagcttcctcctcct 14323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 147 - 456
Target Start/End: Original strand, 7867170 - 7867486
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgattttagcttggtctgtt 246  Q
    ||||| ||||||||||||||||||||||| ||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  7867170 ggtggaatttagcatggaaaaggggagttattttctaccatgggaaagattttttaaatggtcagattaaacaggtgtattgattttagcttggtctgtc 7867269  T
Q  247 cacactatattttttctttctctttaatattcatcttcaacctccattgtcttgaacatatatcattcctgcaattcccctctcctctgttgtagcatct 346  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7867270 cacactatattttttctttctctttaatattgatcttcaacctccattgttttgaacatatatcattcctgcaattcccctctcctctgttgtagcatct 7867369  T
Q  347 aaaaattggtgacaaaagaga-----aagnnnnnnncagtcatcaattacccctttcctgcctcatgttt--tctctccatggtcttggatttctccctt 439  Q
    |||||||| ||||||||||||     ||        |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||    
T  7867370 aaaaattgatgacaaaagagaagaagaaaaaaaaaacagtcatcaattacccctttcctggctcatgttttctctctccatggtcttggatttctccttt 7867469  T
Q  440 ttcagcttcctcctcct 456  Q
    |||||||||||||||||    
T  7867470 ttcagcttcctcctcct 7867486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 8145410 - 8145541
Alignment:
Q  171 gagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgattttagcttggtctgttcacactatatttttt---ctttct 267  Q
    ||||||||||||||||||| |||||||||||  || ||  ||||||| | |  ||||||||||||| |||||||||||||| | |||||||    || |     
T  8145410 gagttgtttcccaccatgggaaagattttttggactgttggattaaagatgattattgattttagcatggtctgttcacacaagattttttttcattccc 8145509  T
Q  268 ctttaatattcatcttcaacctccattgtctt 299  Q
    |||||| ||| | |||||||||||||||||||    
T  8145510 ctttaacattgaccttcaacctccattgtctt 8145541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 23876111 - 23876058
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  23876111 ggtggggtttagcatgggaaatgggagttgtttcccaccatgggaaagattttt 23876058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 7868189 - 7868142
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  7868189 ggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaag 7868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 6085749 - 6085696
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||| |||||||||| ||||| ||||||||||| ||||||| ||||||||||    
T  6085749 ggtggggtttagcatgggaaaggtgagttgtttcctaccatgggaaagattttt 6085696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 44094867 - 44094811
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagatttttt 201  Q
    ||||||||||||||||||| |||||  ||||||||||||||||  ||||| ||||||    
T  44094867 atggtgggatttagcatgggaaaggaaagttgtttcccaccataaaaaagttttttt 44094811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 36390957 - 36391004
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| |||||||||| |||||| |||||||||||||||||| ||||    
T  36390957 ggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaag 36391004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 9123389 - 9123316
Alignment:
Q  385 caattacccctttcctgcctcatgttttctctc--catggtcttggatttctcccttttcagcttcctcctcct 456  Q
    ||||| ||| |||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
T  9123389 caatttcccatttcctgcctcatgttttctctctccatggtctcagatttctcccttttcagcttcctcctcct 9123316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 29060787 - 29060718
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaa 216  Q
    |||||| |||||||||| |||||||| |||||||||||||||| |||| |||||| |||||| |||||||    
T  29060787 ggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttttttttaacggttagattaa 29060718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 40320458 - 40320404
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagatttttt 201  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  40320458 ggtggggtttagcatgggaaaggagagttgtttcccaccatggaaaagttttttt 40320404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 36844612 - 36844665
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||| |||||||||| ||||| ||||||||||||||||||  ||||||||||    
T  36844612 ggtggggtttagcatgggaaaggtgagttgtttcccaccatgagaaagattttt 36844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 9122650 - 9122694
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaa 191  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||    
T  9122650 ggtggcatttagcatgggaaagggaagttgtttcccaccatggaa 9122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 24996724 - 24996684
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  24996724 tttagcatgggaaaggggagttgtttcccaccatgggaaag 24996684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 24995852 - 24995899
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| ||||| |||| ||||||||||||||||||||||||| ||||    
T  24995852 ggtggggtttagaatgggaaaggggagttgtttcccaccatgggaaag 24995899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 32871189 - 32871134
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagatttttt 201  Q
    ||||||| |||||||||| || |||||||||||||||||||| | |||| ||||||    
T  32871189 tggtggggtttagcatgggaatggggagttgtttcccaccataggaaagttttttt 32871134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 42607081 - 42607128
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| |||||||||| |||||||| |||||||||||||||| ||||    
T  42607081 ggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaag 42607128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 6730205 - 6730163
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatgg 189  Q
    |||||| |||||||||| |||||| ||||||||||||||||||    
T  6730205 ggtggggtttagcatgggaaagggaagttgtttcccaccatgg 6730163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 42607860 - 42607824
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttccca 183  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  42607860 ggtggggtttagcatggaaaaggggaattgtttccca 42607824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 49160987 - 49161040
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  49160987 ggtggggtttagcatgggaaaggggagttgtttcctaccatggaaaagattttt 49161040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 33455829 - 33455760
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaa 216  Q
    |||||| |||||||||| |||||||| |||||||||||||| | |||| |||||| |||||| |||||||    
T  33455829 ggtggggtttagcatgggaaaggggaattgtttcccaccataggaaagttttttttaacggttagattaa 33455760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 43768024 - 43768082
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaa 203  Q
    ||||||| ||||||||||| || || ||||||||||||||||||| |||| ||||||||    
T  43768024 atggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttttaa 43768082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 45298407 - 45298328
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtat 226  Q
    |||||||| ||||| ||||||| || |||||||||||||||||||||||  |||||| |||  |||||||||| ||||||||    
T  45298407 atggtggggtttagtatggaaa-ggagagttgtttcccaccatggaaaa-cttttttcaaccatcagattaaagaggtgtat 45298328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 31598835 - 31598772
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaa 217  Q
    |||||||||||||||   |||||||||||||||||| |||| |||||| ||| || ||||||||    
T  31598835 tttagcatggaaaagaaaagttgtttcccaccatgggaaagtttttttgaacagttagattaaa 31598772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 8653769 - 8653727
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatg 188  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  8653769 tggtggggtttagcatggaaaagggggattgtttcccaccatg 8653727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 44022135 - 44022093
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatgg 189  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  44022135 ggtggcatttagcatggaaaaggagagttgttttccaccatgg 44022093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 49161849 - 49161803
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaagtttttt 49161803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 33454866 - 33454935
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaa 216  Q
    |||||| |||||||||| |||||  | |||||||||||||||  |||| |||||| |||||| |||||||    
T  33454866 ggtggggtttagcatgggaaaggaaaattgtttcccaccatgagaaagttttttttaacggttagattaa 33454935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 26836352 - 26836392
Alignment:
Q  153 atttagcatggaaaaggggagttgtttcccaccatggaaaa 193  Q
    ||||||||||| |||||||| |||||||||| |||||||||    
T  26836352 atttagcatgggaaaggggaattgtttcccatcatggaaaa 26836392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 33968180 - 33968236
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccat-ggaaaagatttttt 201  Q
    ||||||| |||||||||| |||||| | |||||||||||||| |||||| |||||||    
T  33968180 tggtggggtttagcatgggaaagggaacttgtttcccaccatgggaaaatatttttt 33968236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 579 - 532
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  579 ggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaag 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 9923388 - 9923475
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    |||||| |||||||||| || || |||||||||||||||||||||||| |||||| |||  | |||||||| ||| ||||| ||||||    
T  9923388 ggtggggtttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccattagattaaagaggagtattaatttta 9923475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 6804891 - 6804938
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| |||||||||| |||| |||||||||||||||||||||||||    
T  6804891 ggtggggtttagcatgggaaagaggagttgtttcccaccatggaaaag 6804938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 4789521 - 4789567
Alignment:
Q  148 gtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 4789567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 1970563 - 1970509
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttt 200  Q
    |||||| ||||||||||| || || ||||||||||||||||||| |||| |||||    
T  1970563 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttt 1970509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 43588356 - 43588418
Alignment:
Q  210 agattaaacaggtgtattgattttagcttggtctgttcacactatattttttctttctcttta 272  Q
    |||||||| |||| ||||||| ||| | |||||||| || | |||||||||||||||||||||    
T  43588356 agattaaagaggtctattgatcttatcatggtctgtccatattatattttttctttctcttta 43588418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 26712429 - 26712389
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  26712429 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 26982167 - 26982127
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  26982167 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 35840578 - 35840502
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtg 223  Q
    |||||| |||||||||| |||||| ||||||||||||| |||| |||| ||||||  || ||||||||||| |||||    
T  35840578 ggtggggtttagcatgggaaagggaagttgtttcccacgatgggaaagttttttttgactgtcagattaaagaggtg 35840502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 7054090 - 7054177
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    ||||| ||||||||||| || || |||||||||||||||||||||||| |||||| |||  | |||||||  ||| ||||| ||||||    
T  7054090 ggtggcatttagcatgggaatggagagttgtttcccaccatggaaaagtttttttcaaccattagattaaggaggagtattaatttta 7054177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17015852 - 17015815
Alignment:
Q  19 gtacctataaaagaattcaaatgtgcattcttaggaga 56  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17015852 gtacctataaaagaattcaaatgtgccttcttaggaga 17015815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17546289 - 17546252
Alignment:
Q  19 gtacctataaaagaattcaaatgtgcattcttaggaga 56  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17546289 gtacctataaaagaattcaaatgtgccttcttaggaga 17546252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 42345393 - 42345481
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    |||||| ||||||||||| || || ||||||||||||||||||| |||| |||||| |||  | |||||||  ||| ||||| ||||||    
T  42345393 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccattagattaaggaggagtattaatttta 42345481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 42346153 - 42346066
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    |||||| |||||||||| || || ||||||||||||| ||||| |||| |||||| |||  | |||||||| ||| ||||| ||||||    
T  42346153 ggtggggtttagcatgggaatggagagttgtttcccatcatgggaaagtttttttcaaccattagattaaagaggagtattaatttta 42346066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 35943076 - 35943118
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatgg 189  Q
    |||||| |||||||||| |||||| ||||||||||||||||||    
T  35943076 ggtggggtttagcatgggaaagggaagttgtttcccaccatgg 35943118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 35943887 - 35943835
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagatttt 199  Q
    |||||| |||||||||| ||||| || ||||||||||| ||||||||| ||||    
T  35943887 ggtggggtttagcatgggaaaggagaattgtttcccactatggaaaagttttt 35943835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 8384068 - 8384020
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaa 193  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  8384068 atggtggggtttagcatgggaaagtggagttgtttcccaccatggaaaa 8384020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 29290123 - 29290170
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  29290123 ggtggggtttagcatggaaatggagagttgtttcccaccatgggaaag 29290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 25970105 - 25970153
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  25970105 tggtggggtttagcatgggaaaggggagttgtttcccaccatgggaaag 25970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 36450726 - 36450775
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||| ||||    
T  36450726 atggtggtatttagcatgggaaaggggagttgttttccaccatgggaaag 36450775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 38009284 - 38009331
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||||||||||||| |||||  | |||||||||||||||||||||    
T  38009284 ggtgggatttagcatgggaaaggataattgtttcccaccatggaaaag 38009331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 39429985 - 39429898
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    |||||| |||||||||| || || ||||||||||||||||||| |||| |||||| |||  | | |||||| ||| ||||| ||||||    
T  39429985 ggtggggtttagcatgggaatggagagttgtttcccaccatgggaaagtttttttcaaccattaaattaaagaggagtattaatttta 39429898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 45330565 - 45330612
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||| |||||  |||| ||||||||||||||||||||||||||||||    
T  45330565 ggtggaatttaaaatgggaaaggggagttgtttcccaccatggaaaag 45330612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 36451474 - 36451428
Alignment:
Q  148 gtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||||    
T  36451474 gtggggtttagcatgggaaagaggagttgtttctcaccatggaaaag 36451428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 22062274 - 22062233
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatg 188  Q
    |||||| ||||| ||||||||||||| |||||||||||||||    
T  22062274 ggtggggtttagtatggaaaaggggaattgtttcccaccatg 22062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 31911489 - 31911400
Alignment:
Q  174 ttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgattttagcttggtctgttcacactatattttttct 263  Q
    |||||||||||||||||||||  |||||  ||  |||||||||  ||| |||  ||||||| | |||||| | |||||||||||||||||    
T  31911489 ttgtttcccaccatggaaaagtattttttgaccatcagattaaggaggagtaccgattttatcatggtctatccacactatattttttct 31911400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 32450239 - 32450150
Alignment:
Q  174 ttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgattttagcttggtctgttcacactatattttttct 263  Q
    |||||||||||||||||||||  |||||  ||  |||||||||  ||| |||  ||||||| | |||||| | |||||||||||||||||    
T  32450239 ttgtttcccaccatggaaaagtattttttgaccatcagattaaggaggagtaccgattttatcatggtctatccacactatattttttct 32450150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 47326828 - 47326767
Alignment:
Q  156 tagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaa 217  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||| ||| || ||||||||    
T  47326828 tagcatgggaaaggaaagttgtttcccaccatgggaaagtttttttgaacagttagattaaa 47326767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 47341624 - 47341563
Alignment:
Q  156 tagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaa 217  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||| ||| || ||||||||    
T  47341624 tagcatgggaaaggaaagttgtttcccaccatgggaaagtttttttgaacagttagattaaa 47341563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 232098 - 232050
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||| ||||| |||| |||||| |||||||||||||||||| ||||    
T  232098 tggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaag 232050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 30808616 - 30808668
Alignment:
Q  142 accatggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||||| |||||  |||| ||||| ||||||||||||||||||| ||||    
T  30808616 accatggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaag 30808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 39429224 - 39429312
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaacaggtgtattgatttta 234  Q
    |||||| ||||||||||| || || ||||||||||| ||||||| |||| |||||| |||  | |||||||  ||| ||||| ||||||    
T  39429224 tggtggcatttagcatgggaatggagagttgtttcctaccatgggaaagtttttttcaaccattagattaaggaggagtattaatttta 39429312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 34716424 - 34716494
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagattttttaaacggtcagattaaa 217  Q
    |||||| |||||||||| || || ||||||||||||| |||||||||| |||||| || | ||||||||||    
T  34716424 ggtggggtttagcatgggaatggagagttgtttcccatcatggaaaagcttttttcaaggatcagattaaa 34716494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 47334199 - 47334246
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  47334199 ggtggggtttagcctggaaaaggggagttgtttcccacaatgggaaag 47334246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 50950145 - 50950192
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||| |||||||||||||| ||  |||||||||||||||||||||||    
T  50950145 ggtggcatttagcatggaaatggatagttgtttcccaccatggaaaag 50950192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 4640526 - 4640575
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||  |||||||||| |||||||| |||||||||||||||| ||||    
T  4640526 atggtggagtttagcatggtaaaggggaattgtttcccaccatgggaaag 4640575  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 6766972 - 6767028
Alignment:
Q  145 atggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaagatttttt 201  Q
    |||||||  ||||| ||||||||||||| |||||| ||| |||||||||| ||||||    
T  6766972 atggtggagtttagtatggaaaaggggaattgttttccatcatggaaaagttttttt 6767028  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 30466189 - 30466229
Alignment:
Q  154 tttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    |||||||||| || |||||||||||||||||||||| ||||    
T  30466189 tttagcatgggaatggggagttgtttcccaccatgggaaag 30466229  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 41884277 - 41884237
Alignment:
Q  147 ggtgggatttagcatggaaaaggggagttgtttcccaccat 187  Q
    |||||| ||||||||||||||||| | ||||||||||||||    
T  41884277 ggtggggtttagcatggaaaagggaaattgtttcccaccat 41884237  T

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Target: scaffold0129 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 43267 - 43219
Alignment:
Q  146 tggtgggatttagcatggaaaaggggagttgtttcccaccatggaaaag 194  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||| ||||    
T  43267 tggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaag 43219  T

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