View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_high_27 (Length: 376)
Name: NF10070_high_27
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 34442601 - 34442243
Alignment:
| Q |
1 |
aagacatatattagaggaacacagaattaaacactaagttcagagtatatattgctcaatgcttactatttaagagaatgaatgatatgatgtaccttct |
100 |
Q |
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| T |
34442601 |
aagacatatattagaggaacacagaattaaacactaagttcagagtatatattgctcaatgcttactgtttaagagaatgaatgatatgatgtaccttct |
34442502 |
T |
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| Q |
101 |
tattaatacttgaaaaccatgaaattctgagagttgcagagaaatgagtgaatttgagatccattcaatattaaaatatactactaataattaacaaaat |
200 |
Q |
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| T |
34442501 |
tattaatacttgaaaaccatgaaattctgagagttgcagagaaatgagtgaatttgagatccattcaatattaaaatatactactaataattaacaaaat |
34442402 |
T |
|
| Q |
201 |
atactgtgcatggtttcacaaaaaaggaggggggccatttaggacaagaatagatagataaaaaagaagaaacatagaataacaatttaccttggaaatt |
300 |
Q |
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| T |
34442401 |
atactgtgcatggtttcacaaaaaaggaggggggccatttaggacaagaatagatagataaaaaagaagaaacatagaataacaatttaccttggaaatt |
34442302 |
T |
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| Q |
301 |
gatgagcttttttattattaatattattattactaagcaagtaatgcaggtgccatgtg |
359 |
Q |
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| T |
34442301 |
gatgagcttttttattattaatattattattactaagcaagtaatgcaggtgccatgtg |
34442243 |
T |
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