View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_high_36 (Length: 319)
Name: NF10070_high_36
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 20816995 - 20817296
Alignment:
| Q |
1 |
tacactaaatgtgcatatcattggatattgcaactagacgacaggaaggaaatttaatgctcccacacctaaaaaccccaaacagaagtgaataaatgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20816995 |
tacactaaatgtgcatatcattggatattgcaactagacgacaggaaggaaatttaatgctcccacacctaaaaaccccaaacagaagtgaataaatgag |
20817094 |
T |
|
| Q |
101 |
taatagcaagtggtcacacacatccatcaacataccaacgttcacattgagatagaaaggaggtgttaaacaatttgttaggttaggtgtctttcatatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20817095 |
taatagcaagtggtcacacacatccatcaacataccaacgttcacattgagatagaaaggaggtgttaaacaatttgttaggttaggtgtctttcatatc |
20817194 |
T |
|
| Q |
201 |
cttcctttctttatctatcaaattcaaatctgatctttatgttagggtcacctctatatgaaacatcttaattttgaacaagactccaattgacataggt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20817195 |
cttcctttctttatctatcaaattcaaatctgatctttatgttagggtcacctctatatgaaacatcttaattttgaacaagactccaattgacataggt |
20817294 |
T |
|
| Q |
301 |
cc |
302 |
Q |
| |
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|| |
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| T |
20817295 |
cc |
20817296 |
T |
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