View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_high_43 (Length: 260)
Name: NF10070_high_43
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_high_43 |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 32377481 - 32377258
Alignment:
| Q |
21 |
aactaggactctcatgcatgttaagcactgaagttggtgcagttctagcagtgatacgacgttatcccgaatttactcctgtctacaacatatcttctcc |
120 |
Q |
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| T |
32377481 |
aactaggactctcatgcatgttaagcactgaagttggtgcagttctagcagtgatacgacgttatcccgaatttactcctgtctacaacatatcttctcc |
32377382 |
T |
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| Q |
121 |
tgaagaatcctacgattcttccattattaattctttaaggtctctccgttctctcatattcaatcctcaacaagaatggcgcactatcgatccttccatt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32377381 |
tgaagaatcctacgattcttccattattaattctttaaggtctctccgttctctcatattcaatcctcaacaagaatggcgcactatcgatccttccatt |
32377282 |
T |
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| Q |
221 |
taccttactcctttccttgatgtc |
244 |
Q |
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|||||||||||||||||||||||| |
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| T |
32377281 |
taccttactcctttccttgatgtc |
32377258 |
T |
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