View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_low_35 (Length: 369)
Name: NF10070_low_35
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 29932499 - 29932851
Alignment:
| Q |
1 |
gagaacatatcatatgagacattatcaaaatacaatactgctagattaacattgaatttcattgatctaatgcttaaatcaaaagtttttatcgaatagc |
100 |
Q |
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| T |
29932499 |
gagaacatatagtatgagacattatcgaaatacaatactgttagatcaacattgaatttcattgatctaatgcttaaatcaaaagtttttatcgaatagc |
29932598 |
T |
|
| Q |
101 |
tcaactcgataaatttgaataaaattactcgatggtctattaaataaattcaaatcaaaatataatataaataagtctatctacaaattttaggttcata |
200 |
Q |
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||| ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
29932599 |
tcagctcgacaaatttgaataaaattacttgatgctctattgaataaattcaaatcaacatataatataaataagtctatctacaaattttaggttcata |
29932698 |
T |
|
| Q |
201 |
agannnnnnnngtgtatgatcattaacataaataaattcaacatttataatgaattattaagcagaataactcagttcagatttacttatgcatacatta |
300 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29932699 |
agattttttttgtgtatgatcattaacataaataaattcaacatttataatgaattattaagcagaataactcagttcagatttacttatgcatacatta |
29932798 |
T |
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| Q |
301 |
attttgatacctcctctatatagtatatattcttaccatgaaacagttccatg |
353 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29932799 |
attttgatacctcctctatatagtatatattcttaccatgaaacagttccatg |
29932851 |
T |
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